Metagenome / Metatranscriptome Family F036841

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F036841
Family Type	Metagenome / Metatranscriptome
Number of Sequences	169
Average Sequence Length	46 residues
Representative Sequence	HGMTGPVIASGLRPGDHLALTAEPADGSARPDAPMMLDVAL
Number of Associated Samples	140
Number of Associated Scaffolds	168

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.18 %
% of genes near scaffold ends (potentially truncated)	98.22 %
% of genes from short scaffolds (< 2000 bps)	95.86 %
Associated GOLD sequencing projects	132
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.639 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.035 % of family members)
Environment Ontology (ENVO)	Unclassified (25.444 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.828 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 11.59% Coil/Unstructured: 88.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 168 Family Scaffolds
PF03795	YCII	44.64
PF00370	FGGY_N	17.26
PF02782	FGGY_C	4.17
PF13279	4HBT_2	4.17
PF00027	cNMP_binding	3.57
PF08044	DUF1707	1.79
PF13545	HTH_Crp_2	1.79
PF01609	DDE_Tnp_1	0.60
PF07714	PK_Tyr_Ser-Thr	0.60
PF13424	TPR_12	0.60
PF08352	oligo_HPY	0.60
PF00069	Pkinase	0.60

COG ID	Name	Functional Category	% Frequency in 168 Family Scaffolds
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	44.64
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	4.76
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.60
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.60
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.60
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.60
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.60
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.64 %
Unclassified	root	N/A	31.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.64 %
Unclassified	root	N/A	31.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.64 %
Unclassified	root	N/A	31.36 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	53.25 %
Unclassified	root	N/A	31.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.18 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	48.52 %
Unclassified	root	N/A	31.36 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.78 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.59 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	40.24 %
Unclassified	root	N/A	31.36 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.18 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.36 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	7.10 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	3.55 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.18 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.59 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.59 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.36 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	5.33 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	3.55 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.18 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.59 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.59 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.59 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.36 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	5.33 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	3.55 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.18 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.59 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.59 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.59 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.36 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	5.33 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	3.55 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.18 %
Actinomadura madurae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	0.59 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.59 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.59 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.59 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_105365750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	967	Open in IMG/M
3300001593\|JGI12635J15846_10747725	Not Available	562	Open in IMG/M
3300003218\|JGI26339J46600_10152321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537	Open in IMG/M
3300003219\|JGI26341J46601_10040002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1499	Open in IMG/M
3300005176\|Ga0066679_10746117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	630	Open in IMG/M
3300005332\|Ga0066388_102652713	Not Available	913	Open in IMG/M
3300005406\|Ga0070703_10109468	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300005435\|Ga0070714_101067827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	786	Open in IMG/M
3300005437\|Ga0070710_10064720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2092	Open in IMG/M
3300005439\|Ga0070711_100726268	Not Available	838	Open in IMG/M
3300005467\|Ga0070706_100579382	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300005602\|Ga0070762_10649257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	704	Open in IMG/M
3300005610\|Ga0070763_10285340	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300005614\|Ga0068856_102360731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300005616\|Ga0068852_100679689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1038	Open in IMG/M
3300005618\|Ga0068864_102105861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	570	Open in IMG/M
3300006028\|Ga0070717_11917713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	534	Open in IMG/M
3300006175\|Ga0070712_100405064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1127	Open in IMG/M
3300006806\|Ga0079220_10126011	Not Available	1373	Open in IMG/M
3300006893\|Ga0073928_11127577	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300007076\|Ga0075435_101379306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	618	Open in IMG/M
3300009148\|Ga0105243_10809213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	924	Open in IMG/M
3300009174\|Ga0105241_10911516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	817	Open in IMG/M
3300009525\|Ga0116220_10370905	All Organisms → cellular organisms → Bacteria → Terrabacteria group	637	Open in IMG/M
3300009553\|Ga0105249_10674279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1093	Open in IMG/M
3300009553\|Ga0105249_10786237	Not Available	1015	Open in IMG/M
3300009700\|Ga0116217_10150190	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300009700\|Ga0116217_10575006	Not Available	703	Open in IMG/M
3300010373\|Ga0134128_10413872	Not Available	1505	Open in IMG/M
3300010375\|Ga0105239_12960607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	554	Open in IMG/M
3300010376\|Ga0126381_100777960	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300010379\|Ga0136449_103807461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	567	Open in IMG/M
3300010398\|Ga0126383_11516202	Not Available	760	Open in IMG/M
3300010398\|Ga0126383_13092002	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300010876\|Ga0126361_10949062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	976	Open in IMG/M
3300010877\|Ga0126356_10102029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	579	Open in IMG/M
3300011106\|Ga0151489_1069132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	602	Open in IMG/M
3300012207\|Ga0137381_10633146	Not Available	931	Open in IMG/M
3300012496\|Ga0157353_1009504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	781	Open in IMG/M
3300012683\|Ga0137398_10907424	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300012901\|Ga0157288_10184566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	652	Open in IMG/M
3300012925\|Ga0137419_11595485	Not Available	555	Open in IMG/M
3300012927\|Ga0137416_11389443	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	636	Open in IMG/M
3300012958\|Ga0164299_10115126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1425	Open in IMG/M
3300012986\|Ga0164304_11475077	Not Available	562	Open in IMG/M
3300012988\|Ga0164306_10699687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	805	Open in IMG/M
3300014326\|Ga0157380_11462159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	735	Open in IMG/M
3300015241\|Ga0137418_11158154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	547	Open in IMG/M
3300016270\|Ga0182036_10141725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1699	Open in IMG/M
3300016294\|Ga0182041_11803529	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300016341\|Ga0182035_11382171	Not Available	632	Open in IMG/M
3300016445\|Ga0182038_10906663	Not Available	777	Open in IMG/M
3300016445\|Ga0182038_11036479	Not Available	727	Open in IMG/M
3300017926\|Ga0187807_1135832	Not Available	782	Open in IMG/M
3300017928\|Ga0187806_1105030	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300017942\|Ga0187808_10139907	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300017942\|Ga0187808_10169049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	967	Open in IMG/M
3300017946\|Ga0187879_10234222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1025	Open in IMG/M
3300017959\|Ga0187779_10445389	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300017961\|Ga0187778_11323058	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300017972\|Ga0187781_10642686	Not Available	766	Open in IMG/M
3300017973\|Ga0187780_10314567	Not Available	1102	Open in IMG/M
3300017973\|Ga0187780_10596504	All Organisms → cellular organisms → Bacteria → Proteobacteria	793	Open in IMG/M
3300017973\|Ga0187780_10627602	Not Available	773	Open in IMG/M
3300017973\|Ga0187780_10972579	Not Available	618	Open in IMG/M
3300017975\|Ga0187782_10045453	All Organisms → cellular organisms → Bacteria	3198	Open in IMG/M
3300017975\|Ga0187782_10193922	Not Available	1519	Open in IMG/M
3300018001\|Ga0187815_10183614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	885	Open in IMG/M
3300018001\|Ga0187815_10185034	Not Available	882	Open in IMG/M
3300018043\|Ga0187887_10384333	Not Available	828	Open in IMG/M
3300018044\|Ga0187890_10815238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	528	Open in IMG/M
3300018060\|Ga0187765_10720919	Not Available	657	Open in IMG/M
3300018085\|Ga0187772_10651690	Not Available	752	Open in IMG/M
3300018086\|Ga0187769_10920459	Not Available	661	Open in IMG/M
3300020082\|Ga0206353_10930059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	926	Open in IMG/M
3300020580\|Ga0210403_10704648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	809	Open in IMG/M
3300021374\|Ga0213881_10128985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1102	Open in IMG/M
3300021401\|Ga0210393_11613370	All Organisms → cellular organisms → Bacteria → Terrabacteria group	514	Open in IMG/M
3300021406\|Ga0210386_11376508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	592	Open in IMG/M
3300021407\|Ga0210383_10807901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	802	Open in IMG/M
3300021477\|Ga0210398_10914920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	702	Open in IMG/M
3300022557\|Ga0212123_10299167	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1126	Open in IMG/M
3300024271\|Ga0224564_1108042	All Organisms → cellular organisms → Bacteria → Terrabacteria group	567	Open in IMG/M
3300025885\|Ga0207653_10341723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	584	Open in IMG/M
3300025903\|Ga0207680_10499484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	866	Open in IMG/M
3300025915\|Ga0207693_11351528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	531	Open in IMG/M
3300025916\|Ga0207663_10817253	Not Available	743	Open in IMG/M
3300025928\|Ga0207700_10149239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1930	Open in IMG/M
3300025928\|Ga0207700_10550370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1024	Open in IMG/M
3300025929\|Ga0207664_10380368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1253	Open in IMG/M
3300025929\|Ga0207664_10705525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	907	Open in IMG/M
3300025929\|Ga0207664_10795486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	851	Open in IMG/M
3300025934\|Ga0207686_11012757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	674	Open in IMG/M
3300025937\|Ga0207669_11959352	All Organisms → cellular organisms → Bacteria → Terrabacteria group	501	Open in IMG/M
3300025941\|Ga0207711_10717343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	932	Open in IMG/M
3300026316\|Ga0209155_1262830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	534	Open in IMG/M
3300026497\|Ga0257164_1084959	Not Available	538	Open in IMG/M
3300026498\|Ga0257156_1055821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	814	Open in IMG/M
3300027090\|Ga0208604_1006650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1092	Open in IMG/M
3300027096\|Ga0208099_1034507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	725	Open in IMG/M
3300027725\|Ga0209178_1333200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	565	Open in IMG/M
3300027775\|Ga0209177_10131885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	829	Open in IMG/M
3300027895\|Ga0209624_10153833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1521	Open in IMG/M
3300027908\|Ga0209006_10662479	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300028380\|Ga0268265_11097644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	790	Open in IMG/M
3300028718\|Ga0307307_10056564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1156	Open in IMG/M
3300028742\|Ga0302220_10085117	Not Available	1260	Open in IMG/M
3300028747\|Ga0302219_10224790	Not Available	726	Open in IMG/M
3300028775\|Ga0302231_10096553	Not Available	1233	Open in IMG/M
3300028781\|Ga0302223_10055817	Not Available	1336	Open in IMG/M
3300028808\|Ga0302228_10510043	Not Available	530	Open in IMG/M
3300029999\|Ga0311339_11122332	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300030490\|Ga0302184_10260983	Not Available	706	Open in IMG/M
3300030524\|Ga0311357_10492825	Not Available	1142	Open in IMG/M
3300030618\|Ga0311354_10641219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1025	Open in IMG/M
3300030707\|Ga0310038_10095373	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300031543\|Ga0318516_10495877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	701	Open in IMG/M
3300031544\|Ga0318534_10743273	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300031549\|Ga0318571_10058522	Not Available	1169	Open in IMG/M
3300031640\|Ga0318555_10630287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	580	Open in IMG/M
3300031668\|Ga0318542_10252231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	898	Open in IMG/M
3300031668\|Ga0318542_10431219	Not Available	682	Open in IMG/M
3300031708\|Ga0310686_100774255	Not Available	560	Open in IMG/M
3300031708\|Ga0310686_113888381	Not Available	1083	Open in IMG/M
3300031748\|Ga0318492_10345045	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300031751\|Ga0318494_10122201	Not Available	1451	Open in IMG/M
3300031751\|Ga0318494_10198378	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300031751\|Ga0318494_10338211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	870	Open in IMG/M
3300031751\|Ga0318494_10808154	Not Available	549	Open in IMG/M
3300031751\|Ga0318494_10913077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	515	Open in IMG/M
3300031769\|Ga0318526_10112132	Not Available	1095	Open in IMG/M
3300031770\|Ga0318521_10732742	Not Available	601	Open in IMG/M
3300031781\|Ga0318547_11049443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	510	Open in IMG/M
3300031782\|Ga0318552_10297848	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300031794\|Ga0318503_10256257	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300031794\|Ga0318503_10312263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	511	Open in IMG/M
3300031795\|Ga0318557_10163690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1009	Open in IMG/M
3300031797\|Ga0318550_10263825	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300031805\|Ga0318497_10052063	All Organisms → cellular organisms → Bacteria	2113	Open in IMG/M
3300031805\|Ga0318497_10183089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1154	Open in IMG/M
3300031819\|Ga0318568_10169814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1339	Open in IMG/M
3300031819\|Ga0318568_10501085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	757	Open in IMG/M
3300031821\|Ga0318567_10252193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	991	Open in IMG/M
3300031823\|Ga0307478_10109961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2146	Open in IMG/M
3300031823\|Ga0307478_11065238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	675	Open in IMG/M
3300031823\|Ga0307478_11644107	Not Available	530	Open in IMG/M
3300031832\|Ga0318499_10081691	Not Available	1239	Open in IMG/M
3300031832\|Ga0318499_10234690	Not Available	713	Open in IMG/M
3300031835\|Ga0318517_10471170	Not Available	566	Open in IMG/M
3300031860\|Ga0318495_10087035	Not Available	1400	Open in IMG/M
3300031896\|Ga0318551_10254866	Not Available	981	Open in IMG/M
3300031896\|Ga0318551_10254866	Not Available	981	Open in IMG/M
3300031897\|Ga0318520_10343598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	905	Open in IMG/M
3300031981\|Ga0318531_10536747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	530	Open in IMG/M
3300032044\|Ga0318558_10286377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	814	Open in IMG/M
3300032044\|Ga0318558_10549317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	577	Open in IMG/M
3300032065\|Ga0318513_10290923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	793	Open in IMG/M
3300032094\|Ga0318540_10652077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	507	Open in IMG/M
3300032160\|Ga0311301_11034606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1080	Open in IMG/M
3300032180\|Ga0307471_100953264	Not Available	1025	Open in IMG/M
3300032205\|Ga0307472_100240144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1412	Open in IMG/M
3300032261\|Ga0306920_100441221	Not Available	1934	Open in IMG/M
3300032782\|Ga0335082_11050939	Not Available	679	Open in IMG/M
3300032783\|Ga0335079_10086155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3568	Open in IMG/M
3300032783\|Ga0335079_10132801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2804	Open in IMG/M
3300032783\|Ga0335079_11296922	Not Available	727	Open in IMG/M
3300032828\|Ga0335080_10900456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	907	Open in IMG/M
3300032954\|Ga0335083_10079591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3308	Open in IMG/M
3300032955\|Ga0335076_11177771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	650	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.12%
Host-Associated	Host-Associated	8.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.43%
Plants	Host-Associated → Plants	8.88%
Aquatic	Environmental → Aquatic	7.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.51%
Freshwater	Environmental → Aquatic → Freshwater	6.51%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.51%
Peat	Environmental → Terrestrial → Peat	5.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.37%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.18%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.07%
Loam	Environmental → Terrestrial → Soil → Loam	14.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.24%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.51%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.37%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.18%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.18%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.59%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.54%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.73%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.55%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.37%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.78%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.18%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.18%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.59%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.04%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.51%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.73%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.14%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.55%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.55%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.37%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.78%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.18%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.18%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.18%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.18%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.18%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.18%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.18%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.59%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.59%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.59%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.59%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.59%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012496	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.090610	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1053657501	3300000955	Soil	VIMLPPARHGMTGPVVASGLRPGDHLALTAEPAAGAAHPAGRPTTPMMLDVVL*
JGI12635J15846_107477252	3300001593	Forest Soil	SHGMTGPVIASGLRQGDHLALTAEPADGSARPDTPMMLDMVL*
JGI26339J46600_101523212	3300003218	Bog Forest Soil	GGHDMTGPVVASGLRAGDRLALTAEPIGGATRPTAPMMLDVLL*
JGI26341J46601_100400023	3300003219	Bog Forest Soil	PHDMTGPVIASGLQAGDRLALTAEPADGAARPTAPMMLDVLL*
Ga0066679_107461172	3300005176	Soil	PLRHDMTGPVIAAGLRRGDHLALTAEPAGGTPRPTTPMMLDVIL*
Ga0066388_1026527131	3300005332	Tropical Forest Soil	HGMTGPVIAAGLRPGDHLALTAEPPGGAPHSTGRPTGPMMLDIVL*
Ga0070703_101094681	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MLPAGSHGMTGPVIASGLRPGDHLALTAEPADGSAHPDTPMMLDMDL*
Ga0070714_1010678272	3300005435	Agricultural Soil	RAVIMLPPARHDMTGPVVASGLRPGDHVVLTAEPAGGGARPTGPMMLDVVL*
Ga0070710_100647202	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	GMAGPVVASGLRPGDHLVLTAEPSGGASRPTTPMMLDVVL*
Ga0070711_1007262682	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MLPPARHDMTGPVVASGLRPGDHVVLTAEPAGVGARPTGPMMLDVVL*
Ga0070706_1005793821	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	GMTGPVIASGLRPGDHLALTAEPADGSAHPDTPMMLDMDL*
Ga0070762_106492573	3300005602	Soil	IASGLHDGDHLALTDEPASGSSQPSTSMMLDVDL*
Ga0070763_102853401	3300005610	Soil	GMLPAGSHGMTGPVIASGLRPGDHLALTAEPADGSARPDTAMMLDMAL*
Ga0068856_1023607312	3300005614	Corn Rhizosphere	VIMLPPARHGMTGPVVASGLRPGDHLVLTAEPASGAAHPAAPMMLDVVL*
Ga0068852_1006796891	3300005616	Corn Rhizosphere	RAVIMLPPARHGMTGPVVASGLRPGDHLALTAEPASGAAHPAGRPTTPMMLDVVL*
Ga0068864_1021058611	3300005618	Switchgrass Rhizosphere	LIGPAGDRAVIMLPPARHGMTGPVVASGLRPGDHLALTAEPASGAVHPAGRPTTPMMLDVVL*
Ga0070717_119177131	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	IGPAGDRAVIMLPPARHGMTGPVVASGLRPGDHLVLTAEPASGAAHPAAPMMLDVVL*
Ga0070712_1004050643	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	DRAVIMLPPARHGMTGPVVASGLRPGDHLALTAEPASGAAHPAGRPTTPMMLDVVL*
Ga0079220_101260112	3300006806	Agricultural Soil	PAGDRAVIMLPPARHGMTGPVVASGLRPGDHLALTAEPASDNAHSGGRPTAPMMLDVVL*
Ga0073928_111275771	3300006893	Iron-Sulfur Acid Spring	GPEGDRAVAMLRPGSNDMTGPVIASGLRSGDHLALTAEPAGGTSRPTTPMMLDVVL*
Ga0075435_1013793062	3300007076	Populus Rhizosphere	GPVVASGLRPGDHLVLTAEPSGGASRPTTPMMLDVVL*
Ga0105243_108092133	3300009148	Miscanthus Rhizosphere	ASGLRPGDHLTLTAEPAAGSAHPAGRPTTPMMLDVVL*
Ga0105241_109115161	3300009174	Corn Rhizosphere	GDRAVIMLPPARHGMTGPVVASGLRPGDHLALTAEPASGAAHPAGRPTTPMMLDVVL*
Ga0116220_103709051	3300009525	Peatlands Soil	HGMTGPVIASGLRPGDHLALTAEPADGSARPDAPMMLDVAL*
Ga0105249_106742793	3300009553	Switchgrass Rhizosphere	ARHGMTGPVVASGLRPGDHLALTAEPASGAAHPAGRPTTPMMLDVVL*
Ga0105249_107862371	3300009553	Switchgrass Rhizosphere	RAVIMLPPARHDMTGPVVASGLRPGDHVVLTAEPAGGAARPTGPMMLDVVL*
Ga0116217_101501904	3300009700	Peatlands Soil	PAGDRSVGMVSAGRHGTMGPVIASGLRAGDHLVLTAEPAGGSSRPDRPMMLDVVL*
Ga0116217_105750062	3300009700	Peatlands Soil	LWLIGPAGDRPVTMLAPGRHDMTGPVIASGLKAGDHLALTAAPAGGTARPAAPMMLDVLL
Ga0134128_104138723	3300010373	Terrestrial Soil	LWLIGPAGDRAVIMLPPARHDMTGPVIASGLRPGDHVVLTAEPVGGAARPTGPMMLDVVL
Ga0105239_129606071	3300010375	Corn Rhizosphere	IVASGLRPGDHLALTAEPASGAAHPAGRPTTPMMLDVVL*
Ga0126381_1007779601	3300010376	Tropical Forest Soil	TRSVGMLPAGQHGMTGPVITAGLRQGDHLALTDEPASGSAHPTTSMMLDIAL*
Ga0136449_1038074611	3300010379	Peatlands Soil	GPAGVRPVTMLPAGPHHMTGPVIASGLRAGDHLALTAEPAAGAARPTAPMMLDVLL*
Ga0126383_115162022	3300010398	Tropical Forest Soil	LIGPAGQRPVAMLPPARHDMTGPVIASGLRPGDHLALTAGPAGGSARPGAPMMLDVALT*
Ga0126383_130920022	3300010398	Tropical Forest Soil	DGTRSVGMLPAGQHGMTGPVITAGLRQGDHLALTDEPASGSAHPTTSMMLDIAL*
Ga0126361_109490621	3300010876	Boreal Forest Soil	GPAGDRPVGMLPLGSNHMTSPVIASGLRSGDHLALSAEPAGGAPRPTTPMMLDLAL*
Ga0126356_101020291	3300010877	Boreal Forest Soil	AGRHGMAGPVVASGLRPGDHLVLTAEPADGASRPTTPMMFDVIL*
Ga0151489_10691321	3300011106	Soil	SGLRPGDHLALTAEPASGAAHPAGRPTTPMMLDVVL*
Ga0137381_106331462	3300012207	Vadose Zone Soil	MTGPVIASGLRPGDHVVLTAEPVGGGTRPTGPMMLDVVL*
Ga0157353_10095041	3300012496	Unplanted Soil	HGMTGPVVASGLRPGDHLALTAEPASGAAHPAGHPTTPMMLDVVL*
Ga0137398_109074242	3300012683	Vadose Zone Soil	VVAVGLKPGDHLALTAGPAGGAARPAGPMMLDVVL*
Ga0157288_101845661	3300012901	Soil	ARHGMTGPVVASGLRPGDHLALTAEPAAGAAHPAARPTTPMMLDVVL*
Ga0137419_115954852	3300012925	Vadose Zone Soil	IMLPPARHDMTGPVIASGLRPGDHVVLTAEPVGGAARPTGPMMLDVVL*
Ga0137416_113894431	3300012927	Vadose Zone Soil	TGPVIASGLRPGDHLALTAEPAAGTSRPTTPMMLDVVL*
Ga0164299_101151264	3300012958	Soil	AVILLPPARHGMTCPVFASGLRPGDHLALTAEPAGAAHRAARPTTPMRLDVVL*
Ga0164304_114750771	3300012986	Soil	PPARHGMTGPVAASGLRPGDHLALTAEPASGAAHPAGRPTTPMMLDVVL*
Ga0164306_106996871	3300012988	Soil	PVVATGLRPGDHLALTAEPAAGAAHPAGRPTTPMMLDVVL*
Ga0157380_114621592	3300014326	Switchgrass Rhizosphere	IGPAGDRAVIMLPPARHGMTGPVVASGLRPGDHLALTAEPASGAAHPAGRPTTPMMLDVVL*
Ga0137418_111581542	3300015241	Vadose Zone Soil	PVVASGLRPGDHLALTAEPAGGGARPAGGGARPAGPMMLDVVL*
Ga0182036_101417251	3300016270	Soil	PVVAAGLRPGDHLALTAEPAGGPPRPTGRPTGPMMLDVIL
Ga0182041_118035291	3300016294	Soil	HGMTGPVIASGLRRGDHLALTAEPSGGASQPTAPMMLDVAL
Ga0182035_113821712	3300016341	Soil	GRHGMTGPVIASGLRGGDRLALTPEPAGGTSAPTAPMMLDVAL
Ga0182038_109066632	3300016445	Soil	PVIASGLRGGDRLALTAEPAGGTSAPTAPMMLDVAL
Ga0182038_110364791	3300016445	Soil	MTGPVVAAGLRPGDHLALTAEPAGGPPRPTGRPTGPMMLDVIL
Ga0187807_11358322	3300017926	Freshwater Sediment	GPAGTRPVGMLPEGSHGMTVPVIAACLRGGDHLALTAEPASGTSQPTAPMMLDIAL
Ga0187806_11050303	3300017928	Freshwater Sediment	LPAGSHGMTGPVIASGLRRGDHLALTAEPAGGTAHPTAPMMLDVDL
Ga0187808_101399073	3300017942	Freshwater Sediment	VGMLPAGRHGMTGPVIASGLRQGDHLALTDEPVGGSVHPTTSMMLDVAL
Ga0187808_101690493	3300017942	Freshwater Sediment	VGMLPAGRHGMTGPVIASGLRPGDHLALTAEPADGSAHPDAPMMLDVAL
Ga0187879_102342221	3300017946	Peatland	IGPAGDRLVTMLPAGPHDMTGPVIASGLQAGDHLALTAEPVGGAARLTAPMMLDVLL
Ga0187779_104453891	3300017959	Tropical Peatland	GMLPAGRHGMTGPVIASGLRQGDHLALTDEPASGSAHPTTSMMLDVDL
Ga0187778_113230581	3300017961	Tropical Peatland	GPAGTRPVGMLPAGSHGMTGPVIASGLRQGDHLALTAEPAGGSARPTTALMLYVAL
Ga0187781_106426862	3300017972	Tropical Peatland	GMLSVGSRGMTGPVIASGLRRGDHLALSAEPAGGASQPTAPMMLDVAL
Ga0187780_103145672	3300017973	Tropical Peatland	IGPAGTRPVGMLPAGSHGMTGPVIASGLRQGDHLALTADPAGGSARPTTAMMLYVAL
Ga0187780_105965043	3300017973	Tropical Peatland	VTMLPPGRHDMAGPVIASGLRSGDHLALTAEPVGGSARPTTPMMLNVAV
Ga0187780_106276021	3300017973	Tropical Peatland	IGPAGDRPVTMLPAGRHDMAGPVVASGLRPGDHLALTAGPIGGSARPTTQMMLDVAL
Ga0187780_109725791	3300017973	Tropical Peatland	PGSHGMTGPVIASGLRQGDHLALTAEPAAGASQPSAPMMLDVAL
Ga0187782_100454535	3300017975	Tropical Peatland	GSHGMTGPVIASGLRQGDHLALTAEPAGGSALPSTPMMLDIAL
Ga0187782_101939222	3300017975	Tropical Peatland	GMLAVGSHGMTGPVIASGLRQGDHLALTAEPVGGTSQPTAPMMLYVAL
Ga0187815_101836141	3300018001	Freshwater Sediment	TGPVIASGLRGGDHLALTAEPASGTSQPTAPMMLDIAL
Ga0187815_101850341	3300018001	Freshwater Sediment	GPVIASGLRPGDHLVLTAEPARGSSRPDRPMMLDVVL
Ga0187887_103843331	3300018043	Peatland	HMVGPVIASALRSGDHLALTVEPAGGTSRPTSPMMLDLVL
Ga0187890_108152381	3300018044	Peatland	PAGLLPLGSSHMTGPVIASGLRSGDHLALSAEPASGASHPTTPMMLDLAL
Ga0187765_107209192	3300018060	Tropical Peatland	GMTGPVIAAELRPGDHLALTAEPPGGASRPTGPMMLDVVL
Ga0187772_106516901	3300018085	Tropical Peatland	LPAGSQGTTGPVIASGLRPGDRLVLTAEPAGGSSRPDMPMMLDVVL
Ga0187769_109204591	3300018086	Tropical Peatland	RPVTMFSSAKMTGPVVASGLRPGDHLVLTAGPAGGAARPATPMMLDIVL
Ga0206353_109300593	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	WLIGPAGDRAVIMLPPARHGMTGQVVASGLRPGDHLALTAEPASGAAHPAGRPTTPMMLDVVL
Ga0210403_107046483	3300020580	Soil	MTGPVIAAGLRPGDHLALTAEPVAGADRPITPMMLDVVL
Ga0213881_101289853	3300021374	Exposed Rock	VIAFGLRPGDHLALTAGPASGTARPTAPMMLDLVL
Ga0210393_116133701	3300021401	Soil	LWLIGPAGARPVAMLAVGAHDMTGPVIASGLRPGDHLALTAGASSGTSRPSVPMMLDVAL
Ga0210386_113765082	3300021406	Soil	PAGRHGMTGPVIASGLRPGDRLALTAEPADGSAHPDTPMMLDLVL
Ga0210383_108079011	3300021407	Soil	GTRSVGMLPAGSHGMTGPVIASGLRQGDHLALTAEPADGSARPDTPMMLYMEL
Ga0210398_109149201	3300021477	Soil	PVIASGLRQGDHLALTAEPADGSARPDTPMMLYMEL
Ga0212123_102991671	3300022557	Iron-Sulfur Acid Spring	VGCVLPVGSDGMTGPVIASGLRAGDHLALTAEPAAGSTQPTTPIMLDVAV
Ga0224564_11080421	3300024271	Soil	GMTGPVIASGLHEGDHLALTDEPAGGSSQPSAPMMLDVDL
Ga0207653_103417231	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	RPGHRLGLRPGDHLALTAEPADGSAHPDTPMMLDMDL
Ga0207680_104994843	3300025903	Switchgrass Rhizosphere	SGLRPGDHLALTAEPASGAAHPAGRPTTPMMLDVVL
Ga0207693_113515282	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	TGPVVASGLRPGDHLALTAGPASGAARPAGPMMLDVVL
Ga0207663_108172531	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	GDRAVVMLPPARHDMTGPVVASGLRPGDHVVLTAEPAGVGARPTGPMMLDVVL
Ga0207700_101492393	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	HGMTGPVVASGLRPGDHLALTAEPASDDAHPAGHPTTPMMLDVVL
Ga0207700_105503703	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTGPVVASGLSPGDHVVLTAEPSGGGARPTGPMMLDVVL
Ga0207664_103803681	3300025929	Agricultural Soil	PVVASGLRPGDHLVLTAEPSGGASRPTTPMMLDVIL
Ga0207664_107055253	3300025929	Agricultural Soil	PVVASGLRPGDHLALTAEPASGAAHPAGRPTTPMMLDVVL
Ga0207664_107954861	3300025929	Agricultural Soil	RAVIMLPPARHDMTGPVVASGLRPGDHVVLTAEPAGGGARPTGPMMLDVVL
Ga0207686_110127572	3300025934	Miscanthus Rhizosphere	IVASGLRPGDHLALTAEPASGAAHPAGRPTTPMMLDVVL
Ga0207669_119593522	3300025937	Miscanthus Rhizosphere	GPVVASGLRPGDHLALTAEPASGAAHPAGRPTTPMMLDVVL
Ga0207711_107173431	3300025941	Switchgrass Rhizosphere	AGDRAVIMLPPARHGMTGPVVASGLRPGDHLALTAEPASGAVHPAGRPTTPMMLDVVL
Ga0209155_12628302	3300026316	Soil	VASGLRPGDHLALTAEPAAGAAHPAGRPATPMMLDVVL
Ga0257164_10849592	3300026497	Soil	GDRAVIVLPPARHGMTGPVVASGLRPGDHLALTAEPAGGGARPAGPMMLDVVL
Ga0257156_10558211	3300026498	Soil	LIGSAGDRAVIVLPPARHGMTGPVVASGLRPGDHLALTAEPAGGGARPAGPMMLDVVL
Ga0208604_10066501	3300027090	Forest Soil	GPVIASGLRPGDHLALTAEPADGSAHPDTPMMLDMAL
Ga0208099_10345072	3300027096	Forest Soil	RPVAMLPAGKGGMTGPVIASGLRQGDHLALTAEPAGGGTRPTAPMVLDIAL
Ga0209178_13332001	3300027725	Agricultural Soil	AGPVVASGLRPGDHLVLTAEPSGGASRPTTPMMLDVVL
Ga0209177_101318851	3300027775	Agricultural Soil	VVASGLRPGDHLVLTAEPSGGASRPTTPMMLDVVL
Ga0209624_101538334	3300027895	Forest Soil	GARPAGMLPAGRHGMTGPVIAAGLRPGDRLALTAEPADGSAHPDTPMMLDMDL
Ga0209006_106624793	3300027908	Forest Soil	GRHGMTGPVIAAGLRPGDRLALTAEPADGSAHPDTPMMLDMDL
Ga0268265_110976441	3300028380	Switchgrass Rhizosphere	PIVASGLRPGDHLALTAEPASGAAHPAGRPTTPMMLDVVL
Ga0307307_100565641	3300028718	Soil	AGDRAVIMLPPARHGMTGPVVASGLRPGDHLALTAEPAAGAAHPAGRPTTPMMLDVVL
Ga0302220_100851171	3300028742	Palsa	QARDHMVGPVIASGLRSGDHLALTVEPAGGTSRPTSPMMLDLVL
Ga0302219_102247902	3300028747	Palsa	VGPVIASGLRSGDHLALTVEPAGGTSRPTSPMMLDLVL
Ga0302231_100965531	3300028775	Palsa	PVIASGLRSGDRLALTVEPAGGTSRPTSPMMLDLVL
Ga0302223_100558173	3300028781	Palsa	SDHMVGPVIASGLRLGDHLALTVEPAGGTSRPTSPMMLDLAL
Ga0302228_105100432	3300028808	Palsa	QASDHMAGPVIASGLRSGDHLALTVEPAGGTSRPTSPMMLDLVL
Ga0311339_111223322	3300029999	Palsa	AGMLPAGAGRMAGPVIAAGLRQGDHLALTAEPAGGSGHPTTPMMLDVTL
Ga0302184_102609832	3300030490	Palsa	RSVGMLPAGSHGMTGPVIASGLRPGDQLALTAEPADGSARPDTPMMLDMAL
Ga0311357_104928251	3300030524	Palsa	SDHMVGPVIARGLHSGDHLALTVEPASGTSRPTSPMMLDLVL
Ga0311354_106412191	3300030618	Palsa	PVIASGLRSGDHLALIVEPAGVTSRPNPPMMLDLVL
Ga0310038_100953734	3300030707	Peatlands Soil	VGMVSAGRHGTMGPVIASGLRAGDHLVLTAEPAGGSSRPDRPMMLDVVL
Ga0318516_104958771	3300031543	Soil	PAGRHGMTGPVIASGLRPGDHLALTAEPADGGARPDAPMMLDVAL
Ga0318534_107432732	3300031544	Soil	MTGPVIASGLRRGDHLALTAEPSGGASQPTAPMMLDVAL
Ga0318571_100585222	3300031549	Soil	GMTGPVVAAGLRPGDHLALTAEPAGGPPRPTGRPTGPMMLDVIL
Ga0318555_106302872	3300031640	Soil	PDGTRSVGMLPADRHGMTGPVIASGLRSGDHLALTDEPADGSAHPTTSMMLDVVL
Ga0318542_102522313	3300031668	Soil	EGTRSVGMLPAAGHGMTGPVIASGLRQGDHLALTDEPAGGSAHPTTSMMFDVAL
Ga0318542_104312192	3300031668	Soil	VIAAGLRPGDHLALTAEPPGGAAHPTGPMMLDVVL
Ga0310686_1007742552	3300031708	Soil	SHGMTGPVIASGLHEGDHLALTDEPAGGSSQPSAPMMLDVAL
Ga0310686_1138883811	3300031708	Soil	GMIGPVIASGLRAGDHLALTAEPAGGTALPSTPMMLDVAV
Ga0318492_103450453	3300031748	Soil	PAGRHGMTGPVIASGLRPGDHLALTAEPADGGARPDAPMMLDMAL
Ga0318494_101222012	3300031751	Soil	HGMTGPVIAAGLRPGDHLALTAEPPGGAAHPTGPMMLDVVL
Ga0318494_101983783	3300031751	Soil	AGMLPAGHHGMTGPVIASGLRSGDQLALTDEPADGSAHPTTSMMLDVVL
Ga0318494_103382111	3300031751	Soil	GPAGTRPVGMLPAGSHGMTGPVIASGLRRGDHLALTAEPSGGASQPTAPMMLDVAL
Ga0318494_108081542	3300031751	Soil	LPPVRHGMTGPVIAAGLRPGDHLALTAEPPGGAARPTGPMMLDVVL
Ga0318494_109130771	3300031751	Soil	PAGMLRAGSHGMTGPVIASGLRPGDHLALTDEPADGSAHPTTSMMLDVAL
Ga0318526_101121321	3300031769	Soil	GGDRAVTMLPPVHHGMTGPVVAAGLRPGDHLALTAEPAGGPPRPTGRPTGPMMLDVIL
Ga0318521_107327421	3300031770	Soil	VMPWRTAGVRPGDHLALTTGPPGGAPRPAGPMMLDVAL
Ga0318547_110494432	3300031781	Soil	GMLPAGHHGMTGPVIASGLRPGDHLALTAEPADGGAGPDAPMMLDVAL
Ga0318552_102978483	3300031782	Soil	IGPSGARSVCLLPGDRHGMTGPVIASGLRQGDHLALTDEPAGGSSHPGRPMMLDVAL
Ga0318503_102562571	3300031794	Soil	SHGMTGPVIASGLRRGDHLALTAEPSGGASQPTAPMMLDVAL
Ga0318503_103122632	3300031794	Soil	GMLRAGSHGMTGPVIASGLRPGDHLALTDEPADGSAHPTTSMMLDVVL
Ga0318557_101636903	3300031795	Soil	DGAGHGMTGPIIASGLRQGDHLALTDEPAGGSAHPTTSMMLDVAL
Ga0318550_102638251	3300031797	Soil	AGHGMTGPIIASGLRQGDHLALTDEPAGGSAHPTTSMMLDVAL
Ga0318497_100520631	3300031805	Soil	MLPAGSHGMTGPVIASGLRRGDHLALTAEPSGGASQPTAPMMLDVAL
Ga0318497_101830893	3300031805	Soil	RAVVMLPPVRHGMTGPVIAAGLRPGDHLALTAGPPGGAARPGPMMLDVVL
Ga0318568_101698142	3300031819	Soil	VIAAGLRPGDHLALTAEPPGGAARPTGPMMLDVVL
Ga0318568_105010853	3300031819	Soil	MLRAGSHGMTGPVIASGLRPGDHLALTDEPADGSAHPTTSMMLDVAL
Ga0318567_102521932	3300031821	Soil	GMTGPVIAAGLRPGDHLALTAEPPGGAARPTGPMMLDVVL
Ga0307478_101099613	3300031823	Hardwood Forest Soil	PAGTRSVGMLPAGRHGMTGPVIASGLRQGDHLALTAEPADGSARPDTPMMLYMEL
Ga0307478_110652382	3300031823	Hardwood Forest Soil	LPAGGHGMTGPVIASGLRPGDHLALTAEPADGSAHPDTPMMLDLDL
Ga0307478_116441071	3300031823	Hardwood Forest Soil	GTTGPVIASGLRRGDHLVLTAEPAGGSSRPDMPMMLNVVL
Ga0318499_100816913	3300031832	Soil	GMLPPVRHGMTGPVIAAGLRPGDHLALTAEPPGGASRPTGPMMLDVVL
Ga0318499_102346902	3300031832	Soil	PVRHGMTGPVIAAGLRPGDHLALTAEPPGGAAHPTGPMMLDVVL
Ga0318517_104711702	3300031835	Soil	VIAGLRPGDHLALTAEPAGGPPRPTGRPTGPMMLDVIL
Ga0318495_100870352	3300031860	Soil	PAAGHGMTGPIIASGLRQGDHLALTDEPAGGSAHPTTSMMLDMAL
Ga0318551_102548662	3300031896	Soil	MITARSPAGLRPGDHLALTAEPPGGAAHPTGPMMLDVVL
Ga0318551_102548663	3300031896	Soil	MLPPVRHGMTGPVIAAGLRPGDHLALTAEPPGGAAHPTGPMMLDVV
Ga0318520_103435982	3300031897	Soil	AASRPVGMLPAGSHGMTGPVIASGLRRGDHLALTAEPSGGASQPTAPMMLDVAL
Ga0318531_105367472	3300031981	Soil	LIGPDGTRSVGMLPADRHGMTGPVIASGLRSGDHLALTDEPADGSAHPTTSMMLDVVL
Ga0318558_102863771	3300032044	Soil	GPVIAAGLRPGDHLALTAEPPGGASRPGPMMLDVVL
Ga0318558_105493172	3300032044	Soil	GPVIASGLRPGDHLALTAEPPGGTPHPTTPMVLDIVL
Ga0318513_102909232	3300032065	Soil	VMLAPVRHGMTGPVIAAGLRPGDHLALTAEPPGGASRPGPMMLDVVL
Ga0318540_106520772	3300032094	Soil	HGMAGPIIASGLRQGDHLALTDEPADGSASPGPSMMLDVAL
Ga0311301_110346061	3300032160	Peatlands Soil	DGMTGPVIASGLRAGDHLALTAEPAGGAAQPTTPMMLDIAV
Ga0307471_1009532643	3300032180	Hardwood Forest Soil	DMTGPVVASGLRPGDHVVLTAEPAGGAARPTGPMMLDVVL
Ga0307472_1002401443	3300032205	Hardwood Forest Soil	ASGLRPGDHLALTAEPASGAVHPAGRPTTPMMLDVVL
Ga0306920_1004412213	3300032261	Soil	LPPGSHGMTGPVIASGLRGGDRLALTAEPAGGTSAPTAPMMLDVAL
Ga0335082_110509393	3300032782	Soil	GRRPAVSMLPPVRHGMTGPVIAAGLRPGDHLALTAEPPGGAPHSTGRPAGPMMLDVVL
Ga0335079_100861551	3300032783	Soil	PDGDRAVIMLPPVRHGMTGPVIAAGLRPGDHLALTAEPPGGTARSPGHPTGPMMLDVVL
Ga0335079_101328011	3300032783	Soil	LPPARHGMTGPVVATGLRPGDHLALTAEPAAGAAHPAGRPTTSMMLDVVL
Ga0335079_112969221	3300032783	Soil	VVASGLRPGDHLALTAEPAGGTARPTTPMMLDVAL
Ga0335080_109004561	3300032828	Soil	PARHGMTGPVVATGLRPGDHLVLTAGPAAGAARPAAPMMLDVVL
Ga0335083_100795915	3300032954	Soil	AGDRAVSMLPPGRHGMTGPVIAAGLRPGDHLALTAAPPGGTPYPAGPMMLDVVL
Ga0335076_111777711	3300032955	Soil	VVASGLRSGDHLALTAEPAGGTARPTTPMMLDVAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F036841

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences