NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F036418

Metagenome Family F036418

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F036418
Family Type Metagenome
Number of Sequences 170
Average Sequence Length 66 residues
Representative Sequence VQNFSGWERSKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEAEALVRHFQELKSALTEPGGR
Number of Associated Samples 123
Number of Associated Scaffolds 170

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 67.65 %
% of genes near scaffold ends (potentially truncated) 35.88 %
% of genes from short scaffolds (< 2000 bps) 81.18 %
Associated GOLD sequencing projects 110
AlphaFold2 3D model prediction Yes
3D model pTM-score0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (53.529 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(15.294 % of family members)
Environment Ontology (ENVO) Unclassified
(41.176 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(68.824 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 49.45%    β-sheet: 0.00%    Coil/Unstructured: 50.55%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.73
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.67.3.1: Ribosome recycling factor, RRFd1dd5a_1dd50.8459
d.67.3.1: Ribosome recycling factor, RRFd1wqga_1wqg0.83719
d.67.3.1: Ribosome recycling factor, RRFd1ek8a_1ek80.82636
a.47.3.1: Cag-Zd1s2xa11s2x0.79714
e.29.1.2: RNA-polymerase beta-primed4g7hd_4g7h0.76993


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 170 Family Scaffolds
PF00873ACR_tran 14.71
PF13435Cytochrome_C554 4.12
PF00144Beta-lactamase 4.12
PF03724META 2.35
PF02566OsmC 2.35
PF00196GerE 1.76
PF00775Dioxygenase_C 1.18
PF09905VF530 1.18
PF00158Sigma54_activat 1.18
PF02321OEP 1.18
PF13520AA_permease_2 1.18
PF00149Metallophos 0.59
PF02812ELFV_dehydrog_N 0.59
PF13432TPR_16 0.59
PF12695Abhydrolase_5 0.59
PF13472Lipase_GDSL_2 0.59
PF00892EamA 0.59
PF13570PQQ_3 0.59
PF02311AraC_binding 0.59
PF00113Enolase_C 0.59
PF03444HrcA_DNA-bdg 0.59
PF00208ELFV_dehydrog 0.59
PF00453Ribosomal_L20 0.59
PF13715CarbopepD_reg_2 0.59
PF01212Beta_elim_lyase 0.59
PF00593TonB_dep_Rec 0.59
PF07638Sigma70_ECF 0.59
PF00698Acyl_transf_1 0.59
PF14537Cytochrom_c3_2 0.59
PF07730HisKA_3 0.59
PF00291PALP 0.59
PF14361RsbRD_N 0.59
PF13505OMP_b-brl 0.59
PF05922Inhibitor_I9 0.59

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 170 Family Scaffolds
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 4.12
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 4.12
COG2367Beta-lactamase class ADefense mechanisms [V] 4.12
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 2.35
COG1764Organic hydroperoxide reductase OsmC/OhrADefense mechanisms [V] 2.35
COG1765Uncharacterized OsmC-related proteinGeneral function prediction only [R] 2.35
COG3187Heat shock protein HslJPosttranslational modification, protein turnover, chaperones [O] 2.35
COG0334Glutamate dehydrogenase/leucine dehydrogenaseAmino acid transport and metabolism [E] 1.18
COG1167DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domainTranscription [K] 1.18
COG3485Protocatechuate 3,4-dioxygenase beta subunitSecondary metabolites biosynthesis, transport and catabolism [Q] 1.18
COG0075Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucGAmino acid transport and metabolism [E] 0.59
COG0076Glutamate or tyrosine decarboxylase or a related PLP-dependent proteinAmino acid transport and metabolism [E] 0.59
COG0112Glycine/serine hydroxymethyltransferaseAmino acid transport and metabolism [E] 0.59
COG0148EnolaseCarbohydrate transport and metabolism [G] 0.59
COG01567-keto-8-aminopelargonate synthetase or related enzymeCoenzyme transport and metabolism [H] 0.59
COG0292Ribosomal protein L20Translation, ribosomal structure and biogenesis [J] 0.59
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 0.59
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 0.59
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 0.59
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 0.59
COG1003Glycine cleavage system protein P (pyridoxal-binding), C-terminal domainAmino acid transport and metabolism [E] 0.59
COG1104Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS familyAmino acid transport and metabolism [E] 0.59
COG1404Serine protease, subtilisin familyPosttranslational modification, protein turnover, chaperones [O] 0.59
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.59
COG1921Seryl-tRNA(Sec) selenium transferaseTranslation, ribosomal structure and biogenesis [J] 0.59
COG1982Arginine/lysine/ornithine decarboxylaseAmino acid transport and metabolism [E] 0.59
COG2008Threonine aldolaseAmino acid transport and metabolism [E] 0.59
COG2524Predicted transcriptional regulator, contains C-terminal CBS domainsTranscription [K] 0.59
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 0.59
COG2902NAD-specific glutamate dehydrogenaseAmino acid transport and metabolism [E] 0.59
COG3033TryptophanaseAmino acid transport and metabolism [E] 0.59
COG3850Signal transduction histidine kinase NarQ, nitrate/nitrite-specificSignal transduction mechanisms [T] 0.59
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 0.59
COG4564Signal transduction histidine kinaseSignal transduction mechanisms [T] 0.59
COG4585Signal transduction histidine kinase ComPSignal transduction mechanisms [T] 0.59
COG4992Acetylornithine/succinyldiaminopimelate/putrescine aminotransferaseAmino acid transport and metabolism [E] 0.59


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms53.53 %
UnclassifiedrootN/A46.47 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000033|ICChiseqgaiiDRAFT_c0854485Not Available552Open in IMG/M
3300000363|ICChiseqgaiiFebDRAFT_11268988All Organisms → cellular organisms → Bacteria → FCB group2274Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101347260Not Available590Open in IMG/M
3300004114|Ga0062593_103036777Not Available537Open in IMG/M
3300004156|Ga0062589_100468937Not Available1050Open in IMG/M
3300004480|Ga0062592_100036622All Organisms → cellular organisms → Bacteria2505Open in IMG/M
3300004480|Ga0062592_102465903Not Available522Open in IMG/M
3300005093|Ga0062594_100085397All Organisms → cellular organisms → Bacteria1811Open in IMG/M
3300005290|Ga0065712_10373311All Organisms → cellular organisms → Bacteria760Open in IMG/M
3300005327|Ga0070658_11381877Not Available611Open in IMG/M
3300005339|Ga0070660_100152081All Organisms → cellular organisms → Bacteria1861Open in IMG/M
3300005341|Ga0070691_10781872All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300005345|Ga0070692_10174346All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1242Open in IMG/M
3300005354|Ga0070675_100002410All Organisms → cellular organisms → Bacteria13947Open in IMG/M
3300005355|Ga0070671_100062792All Organisms → cellular organisms → Bacteria3093Open in IMG/M
3300005355|Ga0070671_100123802All Organisms → cellular organisms → Bacteria2177Open in IMG/M
3300005356|Ga0070674_100507290All Organisms → cellular organisms → Bacteria1006Open in IMG/M
3300005364|Ga0070673_100110956Not Available2275Open in IMG/M
3300005364|Ga0070673_100526620Not Available1072Open in IMG/M
3300005365|Ga0070688_100242225All Organisms → cellular organisms → Bacteria1280Open in IMG/M
3300005365|Ga0070688_100564077All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium867Open in IMG/M
3300005366|Ga0070659_100620899All Organisms → cellular organisms → Bacteria930Open in IMG/M
3300005436|Ga0070713_100390098All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae1299Open in IMG/M
3300005444|Ga0070694_100470714All Organisms → cellular organisms → Bacteria995Open in IMG/M
3300005456|Ga0070678_101074613Not Available742Open in IMG/M
3300005458|Ga0070681_10002474All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis16919Open in IMG/M
3300005466|Ga0070685_10433299All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium917Open in IMG/M
3300005471|Ga0070698_100867493Not Available848Open in IMG/M
3300005518|Ga0070699_100233741All Organisms → cellular organisms → Bacteria1640Open in IMG/M
3300005544|Ga0070686_101359620Not Available595Open in IMG/M
3300005545|Ga0070695_100316254All Organisms → cellular organisms → Bacteria1159Open in IMG/M
3300005549|Ga0070704_101475845Not Available625Open in IMG/M
3300005564|Ga0070664_100031867All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes4408Open in IMG/M
3300005616|Ga0068852_100814178All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300005617|Ga0068859_101298074All Organisms → cellular organisms → Bacteria → Terrabacteria group802Open in IMG/M
3300005617|Ga0068859_101326797Not Available793Open in IMG/M
3300005618|Ga0068864_102303533Not Available545Open in IMG/M
3300005840|Ga0068870_10982812Not Available601Open in IMG/M
3300005841|Ga0068863_100611712All Organisms → cellular organisms → Bacteria → Proteobacteria1079Open in IMG/M
3300005842|Ga0068858_100963194All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300006169|Ga0082029_1090605All Organisms → cellular organisms → Bacteria1193Open in IMG/M
3300006169|Ga0082029_1765637All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales3220Open in IMG/M
3300006196|Ga0075422_10228951All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300006844|Ga0075428_100203324Not Available2141Open in IMG/M
3300006844|Ga0075428_100462806All Organisms → cellular organisms → Bacteria1358Open in IMG/M
3300006844|Ga0075428_100480941All Organisms → cellular organisms → Bacteria1329Open in IMG/M
3300006844|Ga0075428_100506184All Organisms → cellular organisms → Bacteria1292Open in IMG/M
3300006845|Ga0075421_100027127All Organisms → cellular organisms → Bacteria7224Open in IMG/M
3300006845|Ga0075421_100073688All Organisms → cellular organisms → Bacteria4307Open in IMG/M
3300006845|Ga0075421_100191736All Organisms → cellular organisms → Bacteria2535Open in IMG/M
3300006845|Ga0075421_100201657All Organisms → cellular organisms → Bacteria2462Open in IMG/M
3300006845|Ga0075421_100311715All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium1911Open in IMG/M
3300006846|Ga0075430_100002120All Organisms → cellular organisms → Bacteria16409Open in IMG/M
3300006846|Ga0075430_100324920Not Available1272Open in IMG/M
3300006847|Ga0075431_100656961All Organisms → cellular organisms → Bacteria1028Open in IMG/M
3300006847|Ga0075431_100682534Not Available1006Open in IMG/M
3300007004|Ga0079218_10736021Not Available933Open in IMG/M
3300007004|Ga0079218_13581924Not Available527Open in IMG/M
3300009094|Ga0111539_10846751Not Available1064Open in IMG/M
3300009100|Ga0075418_10072416Not Available3670Open in IMG/M
3300009100|Ga0075418_10451220All Organisms → cellular organisms → Bacteria1378Open in IMG/M
3300009147|Ga0114129_10451785All Organisms → cellular organisms → Bacteria1685Open in IMG/M
3300009147|Ga0114129_12149910Not Available672Open in IMG/M
3300009147|Ga0114129_12250952Not Available655Open in IMG/M
3300009147|Ga0114129_13093085Not Available544Open in IMG/M
3300009148|Ga0105243_10084452All Organisms → cellular organisms → Bacteria2600Open in IMG/M
3300009156|Ga0111538_10208856All Organisms → cellular organisms → Bacteria2476Open in IMG/M
3300009174|Ga0105241_11923127Not Available580Open in IMG/M
3300009177|Ga0105248_10571403All Organisms → cellular organisms → Bacteria1276Open in IMG/M
3300009840|Ga0126313_10027196All Organisms → cellular organisms → Bacteria3885Open in IMG/M
3300009840|Ga0126313_10049650All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium2954Open in IMG/M
3300009840|Ga0126313_10281791Not Available1296Open in IMG/M
3300010036|Ga0126305_10450194Not Available854Open in IMG/M
3300010037|Ga0126304_10161278All Organisms → cellular organisms → Bacteria1455Open in IMG/M
3300010037|Ga0126304_10965939Not Available580Open in IMG/M
3300010038|Ga0126315_11030424Not Available553Open in IMG/M
3300010040|Ga0126308_10529957All Organisms → cellular organisms → Bacteria798Open in IMG/M
3300010042|Ga0126314_11081129Not Available597Open in IMG/M
3300010045|Ga0126311_10635458Not Available848Open in IMG/M
3300010045|Ga0126311_11081135Not Available659Open in IMG/M
3300010166|Ga0126306_10024841All Organisms → cellular organisms → Bacteria3996Open in IMG/M
3300010166|Ga0126306_11829759Not Available509Open in IMG/M
3300010400|Ga0134122_12238249Not Available591Open in IMG/M
3300010403|Ga0134123_12572379Not Available576Open in IMG/M
3300012212|Ga0150985_106517072Not Available724Open in IMG/M
3300012212|Ga0150985_119118764Not Available509Open in IMG/M
3300012469|Ga0150984_107285321All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300012469|Ga0150984_118867689All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae1341Open in IMG/M
3300012500|Ga0157314_1009715All Organisms → cellular organisms → Bacteria → FCB group818Open in IMG/M
3300012908|Ga0157286_10193732Not Available680Open in IMG/M
3300012960|Ga0164301_10488612Not Available885Open in IMG/M
3300012985|Ga0164308_11458522All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300013296|Ga0157374_11624825Not Available670Open in IMG/M
3300013306|Ga0163162_12753467Not Available566Open in IMG/M
3300013307|Ga0157372_10422870Not Available1553Open in IMG/M
3300014326|Ga0157380_11982941Not Available644Open in IMG/M
3300015262|Ga0182007_10402030Not Available522Open in IMG/M
3300015371|Ga0132258_10456876All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae3185Open in IMG/M
3300015371|Ga0132258_10639928All Organisms → cellular organisms → Bacteria2673Open in IMG/M
3300015371|Ga0132258_11080367Not Available2028Open in IMG/M
3300015371|Ga0132258_12136688Not Available1407Open in IMG/M
3300015372|Ga0132256_100599036Not Available1216Open in IMG/M
3300015373|Ga0132257_101678553Not Available814Open in IMG/M
3300015373|Ga0132257_103819419Not Available548Open in IMG/M
3300017792|Ga0163161_10676521Not Available857Open in IMG/M
3300017792|Ga0163161_11150730Not Available669Open in IMG/M
3300018073|Ga0184624_10219371All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium850Open in IMG/M
3300018476|Ga0190274_10686135Not Available1066Open in IMG/M
3300018481|Ga0190271_13237987Not Available546Open in IMG/M
3300019356|Ga0173481_10861410Not Available507Open in IMG/M
3300022756|Ga0222622_10004093All Organisms → cellular organisms → Bacteria6406Open in IMG/M
3300025315|Ga0207697_10047299All Organisms → cellular organisms → Bacteria1773Open in IMG/M
3300025321|Ga0207656_10077871All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae1485Open in IMG/M
3300025893|Ga0207682_10121677All Organisms → cellular organisms → Bacteria1158Open in IMG/M
3300025899|Ga0207642_10061748All Organisms → cellular organisms → Bacteria1744Open in IMG/M
3300025903|Ga0207680_10631799Not Available766Open in IMG/M
3300025903|Ga0207680_10733274Not Available708Open in IMG/M
3300025904|Ga0207647_10133244All Organisms → cellular organisms → Bacteria → FCB group1459Open in IMG/M
3300025909|Ga0207705_11070477Not Available622Open in IMG/M
3300025920|Ga0207649_10715990Not Available777Open in IMG/M
3300025925|Ga0207650_10007264All Organisms → cellular organisms → Bacteria7546Open in IMG/M
3300025925|Ga0207650_10580932Not Available941Open in IMG/M
3300025925|Ga0207650_10763550Not Available818Open in IMG/M
3300025926|Ga0207659_11271878Not Available632Open in IMG/M
3300025931|Ga0207644_10486964All Organisms → cellular organisms → Bacteria → FCB group1016Open in IMG/M
3300025931|Ga0207644_10730946Not Available826Open in IMG/M
3300025931|Ga0207644_11167168All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300025932|Ga0207690_10478168All Organisms → cellular organisms → Bacteria1005Open in IMG/M
3300025935|Ga0207709_11357286All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300025937|Ga0207669_11198460Not Available643Open in IMG/M
3300025940|Ga0207691_11179886Not Available635Open in IMG/M
3300025941|Ga0207711_10050166All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae3572Open in IMG/M
3300025941|Ga0207711_10453551All Organisms → cellular organisms → Bacteria → FCB group1194Open in IMG/M
3300025944|Ga0207661_10463504All Organisms → cellular organisms → Bacteria1155Open in IMG/M
3300025944|Ga0207661_11165931Not Available709Open in IMG/M
3300025960|Ga0207651_10342666All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1256Open in IMG/M
3300025960|Ga0207651_10386684All Organisms → cellular organisms → Bacteria1187Open in IMG/M
3300025960|Ga0207651_11700380Not Available568Open in IMG/M
3300025981|Ga0207640_12028893All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300026067|Ga0207678_11555281Not Available583Open in IMG/M
3300026075|Ga0207708_10030260All Organisms → cellular organisms → Bacteria4106Open in IMG/M
3300026089|Ga0207648_10186641All Organisms → cellular organisms → Bacteria1837Open in IMG/M
3300026089|Ga0207648_10418744Not Available1216Open in IMG/M
3300026121|Ga0207683_10413435All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1242Open in IMG/M
3300026142|Ga0207698_10194438All Organisms → cellular organisms → Bacteria1811Open in IMG/M
3300026142|Ga0207698_11898933Not Available610Open in IMG/M
3300027821|Ga0209811_10003152All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root4045375Open in IMG/M
3300027880|Ga0209481_10111840All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1326Open in IMG/M
3300027909|Ga0209382_10186598All Organisms → cellular organisms → Bacteria2383Open in IMG/M
3300027909|Ga0209382_10393545Not Available1544Open in IMG/M
3300027909|Ga0209382_10993527Not Available875Open in IMG/M
3300031538|Ga0310888_10421609Not Available787Open in IMG/M
3300031562|Ga0310886_10172163All Organisms → cellular organisms → Bacteria → FCB group1159Open in IMG/M
3300031716|Ga0310813_11730191Not Available586Open in IMG/M
3300031824|Ga0307413_10537287All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium946Open in IMG/M
3300031847|Ga0310907_10230631All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sBnM-33901Open in IMG/M
3300031852|Ga0307410_10015157All Organisms → cellular organisms → Bacteria4564Open in IMG/M
3300031858|Ga0310892_10119586All Organisms → cellular organisms → Bacteria1477Open in IMG/M
3300031901|Ga0307406_10263245All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes1306Open in IMG/M
3300031908|Ga0310900_10241535All Organisms → cellular organisms → Bacteria → Terrabacteria group1295Open in IMG/M
3300031938|Ga0308175_100178955All Organisms → cellular organisms → Bacteria → FCB group2066Open in IMG/M
3300031938|Ga0308175_101351844Not Available794Open in IMG/M
3300031938|Ga0308175_102747472Not Available550Open in IMG/M
3300031939|Ga0308174_11027736Not Available700Open in IMG/M
3300032002|Ga0307416_101822533All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300032004|Ga0307414_10840160All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes839Open in IMG/M
3300032013|Ga0310906_11294039Not Available532Open in IMG/M
3300032179|Ga0310889_10084146All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sBnM-331323Open in IMG/M
3300032421|Ga0310812_10484475All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium557Open in IMG/M
3300033475|Ga0310811_11467492Not Available513Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere15.29%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere8.82%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil7.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil6.47%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.29%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.29%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere4.71%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.53%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.53%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.53%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.94%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.94%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.94%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.35%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.35%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.76%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.76%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.76%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.76%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.18%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest1.18%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.18%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.18%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.18%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.18%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.18%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.59%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.59%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.59%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.59%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.59%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.59%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.59%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.59%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.59%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.59%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.59%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.59%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012500Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610Host-AssociatedOpen in IMG/M
3300012908Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_085448513300000033SoilVNDLARWERSKLEKLTELQSRTIEGLGMLLAAPAPPEAKVAEADALVRHYKELKDALIEPGTARLDDARG*
ICChiseqgaiiFebDRAFT_1126898813300000363SoilVQNFSGWERSKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFQELKNALSEAPTAR*
INPhiseqgaiiFebDRAFT_10134726013300000364SoilVXNFXGWXRXKLEKLTELXSRTIEGVGMLLSTPASPEEKVAEAEALVRHFRELKNALTDAGGR*
Ga0062593_10303677713300004114SoilVQNFSGWERSKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFQELKSALTEPGGR*
Ga0062589_10046893723300004156SoilVHNLARWERSKLEKLTELQSRTIEGLGMVLATPAPPEAKVAEADALVRHYRELKDALVEPGTGSLDDAGD*
Ga0062592_10003662233300004480SoilVQNFSGWERSKLERLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFRELKNALTEGQAPTAR*
Ga0062592_10246590313300004480SoilVYSFSGWERSKLDQLVELQSRTIELVGMVLATPAPPETKVAEAAELIRHFQELRDTLTEQATTQGRSP*
Ga0062594_10008539723300005093SoilMQNFASLERSKLEKLTELQSRTIDGLGMVLATPAPPEAKVAEADELVRHYRELKDTLMGPGPGSRDAGD*
Ga0065712_1037331123300005290Miscanthus RhizosphereVQNFAGWDRSKLERLAELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFQELKNALSEAPTAR*
Ga0070658_1138187713300005327Corn RhizosphereVQNFSGWERSKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFQELKSALTEAGGR*
Ga0070660_10015208123300005339Corn RhizosphereVQNFAGWDRSKLERLTELQSRTIEGVGMVLSTPASPEEKVAEADALLRHYLELKNELTEAKASTVR*
Ga0070691_1078187223300005341Corn, Switchgrass And Miscanthus RhizosphereVQNFSGWERSKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFRELKSALTEAKAPTAP*
Ga0070692_1017434623300005345Corn, Switchgrass And Miscanthus RhizosphereMHNFASLERSKLEKLTELQSRTIDGLGMVLATPAPPEAKVAEADELVRHYRELKDTLMGPGPGSRDAGD*
Ga0070675_10000241043300005354Miscanthus RhizosphereVYSFSGWERSKLDQLVELQSRTIELLGMVLATPAPPETKVAEAAELIRHFQELRDTLTEQATTQGRSP*
Ga0070671_10006279223300005355Switchgrass RhizosphereVQNFSGWERSKLEKLTELQSRTIETVGMLLSTPASPEEKVAEAEALVRHFRELKNALTEAKASTVR*
Ga0070671_10012380213300005355Switchgrass RhizosphereRCRVQNFSGWERSKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEAEALVRHFQELKSALTEPGGR*
Ga0070674_10050729023300005356Miscanthus RhizosphereVQNFSGWERSKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEAEALVRHFQELKSALTEPGGR*
Ga0070673_10011095613300005364Switchgrass RhizosphereVDSFSGWERSKLDQLVELQSRTIELVGMVLATPAPPETKVAEAQELIRHFRELRDTLTVQATTQGRSP*
Ga0070673_10052662013300005364Switchgrass RhizosphereRVQNFSGWERSKLERLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFRELKNALTEGQAPTAR*
Ga0070688_10024222513300005365Switchgrass RhizosphereGRGRCRVQNFSGWERSKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFQELKSALTEPGGR*
Ga0070688_10056407723300005365Switchgrass RhizosphereVYSFSGWERSKLDQLVELQSRTIELLGMVLATPAPPETKVAEAAELIRHFQELRDTLTEQATTQGR
Ga0070659_10062089913300005366Corn RhizosphereNFAGWDRSKLERLTELQSRTIEGVGMVLSTPASPEEKVAEADALLRHYLELKNELTEAKASTVR*
Ga0070713_10039009823300005436Corn, Switchgrass And Miscanthus RhizosphereVQNFSGWERSKLERLTELQSRTIEGVGMLLSTPASPEEKVAEAEALVRHFQELKSALTEPGGR*
Ga0070694_10047071413300005444Corn, Switchgrass And Miscanthus RhizosphereQNFASLERSKLEKLTELQSRTIDGLGMVLATPAPPEAKVAEADELVRHYRELKDTLMGPGPGSRDAGD*
Ga0070678_10107461313300005456Miscanthus RhizosphereVQNFAGWDRSKLERLAELQSRTIEGVGMLLSTPASPEEKVAEAEALVRHFHELKNALTEAKASTVR*
Ga0070681_10002474113300005458Corn RhizosphereDTPRQRRYRVQNFSGWERSKLERLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFRELKNALTEGQAPTAR*
Ga0070685_1043329923300005466Switchgrass RhizosphereVYSFSGWERSKLDQLVELQSRTIELVGMVLATPAPPETKVAEAAELIRHFQELRDT
Ga0070698_10086749323300005471Corn, Switchgrass And Miscanthus RhizosphereVQNLAAWERSKLEKLTELQARTIEWVGMVLATPAPPEAKVAEADALVRHYQELKDALLEPDDAGD*
Ga0070699_10023374123300005518Corn, Switchgrass And Miscanthus RhizosphereVQNLAAWERSKLEKLTELQARTIEWVGMVLATPAPPEAKVAEADALVRHYQELKDALLAPETGRLDNAGD*
Ga0070686_10135962023300005544Switchgrass RhizosphereMQNFASLERSKLEKLTELQSRTIDGLGMLLATPAPAEAKVAEADELVRHFRELKEMLMGPGPGSKDAGG*
Ga0070695_10031625423300005545Corn, Switchgrass And Miscanthus RhizosphereCRVQNFSGWERSKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFQELKSALTEPGGR*
Ga0070704_10147584513300005549Corn, Switchgrass And Miscanthus RhizosphereMHNFASLERSKLEKLTELQSRTLDGLGMVLATPAPPEAKVAEADELVRHYRELKDTLLGPAPASRDAGD*
Ga0070664_10003186723300005564Corn RhizosphereMDNFAGWERSKLEKLTELQSRTIDGLGMVLSTSAPPEAKVAEAEELVRHFRELKDTLAGPQTSRDSRK*
Ga0068852_10081417823300005616Corn RhizosphereGWERSKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFQELKSALTEPGGR*
Ga0068859_10129807413300005617Switchgrass RhizosphereMQNFASLERSKLEKLTELQSRTIDGLGMVLATPAPPEAKVAEADELVRHFRELKDTLLG
Ga0068859_10132679713300005617Switchgrass RhizosphereRCRVQNFSGWERSKLERLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFRELKNALTEGQAPTAR*
Ga0068864_10230353323300005618Switchgrass RhizosphereLEKLTELQSRTIDGLGMVLATSAPPEAKVAEAEELVRHFRELKDTLAGPQTSRDSRK*
Ga0068870_1098281213300005840Miscanthus RhizosphereKLEKLTELQSRTIDGLGMLLATPAPAEAKVAEADELVRHFRELKEMLMGPGPGSKDAGG*
Ga0068863_10061171213300005841Switchgrass RhizosphereVDSFSGWERSKLDQLVELQSRTIELVGMVLATPAPPETKVAEAAELIRHFQELRDTLTEQATTQGRSP*
Ga0068858_10096319413300005842Switchgrass RhizosphereRVQNFSGWERSKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFQELKSALTEAGGR*
Ga0082029_109060513300006169Termite NestKLEKLTELQSRTIEGLGMLLAAPAPPEAKVAEADALVRHFQELKDALIEPGSGSREARA*
Ga0082029_176563723300006169Termite NestVQNFSGWERSKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFRELKNALTEAKASTAP*
Ga0075422_1022895123300006196Populus RhizosphereVQNFSGWERSKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFQELKSALTEAKAPTAP*
Ga0075428_10020332453300006844Populus RhizosphereERSKLEKLTELQSRTIEGLGMLLAAPAPPEAKVAEADALVRHFQELKDTLVGPGTSSRDATR*
Ga0075428_10046280613300006844Populus RhizosphereMHNFAGLERSKLEKLIELQSRTIDGLGMLLAAPAPPEAKVAEADELVRHYRELKDTLIGPEPASHDA
Ga0075428_10048094123300006844Populus RhizosphereVQNFSGWERTKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFQELKSALTEAKAPTAP*
Ga0075428_10050618433300006844Populus RhizosphereERSKLEKLTELQSRTIEGLGMLLAAPAPPEAKVAEADALVRHYKELKDALIEPGAGRRDDAGG*
Ga0075421_10002712743300006845Populus RhizosphereVNNFAEWERSKLEKLTELQSRTIEGLGMLLAAPAPAEAKVAEADALVRHYQELKDTLVEPGTGKRPGGK*
Ga0075421_10007368853300006845Populus RhizosphereVHDFAGMERSKLEKLTELQSRTIEGLGMLLAAPAPPEAKVAEADALVRHFQELKDTLVGPGTSSRDATR*
Ga0075421_10019173613300006845Populus RhizosphereVHNFAGLERSKLEKLSELQSRTIEGVGMVLATPAPPEAKVAEADAIVRHYRELKDALIEPVTGSLGARE*
Ga0075421_10020165723300006845Populus RhizosphereVNDLARWERSKLEKLTELQSRTIEGLGMLLAAPAPPEAKVAEADALVRHYKELKDALIEPGAGRRDDAGG*
Ga0075421_10031171513300006845Populus RhizosphereWERSKLEKLTELQSRTIEGLGMLLAAPAPPEAKVAEADALVRHYQELKDAIVEPGTGSLDSRK*
Ga0075430_10000212063300006846Populus RhizosphereVNDLARWERSKLEKLTELQSRTIEGLGMVLATPAPPEAKVAEADALVRHYQELKDALIEPGTARVD*
Ga0075430_10032492013300006846Populus RhizosphereARWERSKLEKLTELQSRTIEGLGMLLAAPAPPEAKVAEADALVRHYKELKDALIEPGTARLDDARG*
Ga0075431_10065696133300006847Populus RhizosphereREVRRVNDLARWERSKLEKLTELQSRTIEGLGMLLAAPAPPEAKVAEADALVRHYKELKDALIEPGAGRRDDAGG*
Ga0075431_10068253413300006847Populus RhizosphereEKLTELQSRTIEGLGMLLAAPAPPEAKVAEADALVRHYKELKDALIEPGTARLDDARG*
Ga0079218_1073602113300007004Agricultural SoilSEPREMREVTRVHDLAKWERSKLEKLTELQSRTIEGLGMVLATPASPEAKVAEADALVRHYQELKDALIEPGTGSLDAGK*
Ga0079218_1358192413300007004Agricultural SoilVNNFAGLERSKLEKLTELQSRTIEGVGMVLATPAPSEAKVAEAEAIVRHYQELKDELIEPVTGTRGAGA*
Ga0111539_1084675113300009094Populus RhizosphereMERSKLEKLTELQSRTIEGLGMLLAAPAPPEAKVAEADALVRHFQELKDTLVGPGTSSRDATR*
Ga0075418_1007241643300009100Populus RhizosphereLEKLTELQSRTIEGLGMLLAAPAPPEAKVAEADALVRHYQELKDTLVGPEAGSREGGR*
Ga0075418_1045122033300009100Populus RhizosphereMQNFASLERSKLEKLTELQSRTIDGLGMVLATPAPPEAKVAEADELVRHYRELKDTLI
Ga0114129_1045178523300009147Populus RhizosphereVHNLAGWERSKLEKLTELQSRTIEGVGMVLATPATPEAKVAEADALVRHYQELKDALIEPGTSSLDDAGER*
Ga0114129_1214991023300009147Populus RhizosphereLERSKLEKLVELQSRTIDGLGMLLATPAAPEEKVAEADALVRHYQELKDTLMGPVSTPPSR*
Ga0114129_1225095223300009147Populus RhizosphereLTELQSRTIEGLGMVLATPAPPETKVEEAGALVRHYQELKDTLLGAGTGSRDASK*
Ga0114129_1309308523300009147Populus RhizosphereMHNFAGLERSKLEKLTELQSRTIEGLGMVLATPAPPEAKVAEADELVRHYRELKDTLIGPEPASHDAGR*
Ga0105243_1008445253300009148Miscanthus RhizosphereWERSKLEKLTELQARTIEWVGMVLATPAPPEAKVAEADELVRHYRELKDTLMGPGPGSRDAGD*
Ga0111538_1020885613300009156Populus RhizosphereMHNFASLERSKLEKLTELQSRTIDGLGMVLATPAPPEAKVAEADELVRHFRELKDTLLGPAPASRDAGD*
Ga0105241_1192312713300009174Corn RhizosphereMQNFASLERSKLEKLTELQSRTIDGLGMVLATPAPPEAKVAEADELVRHYRELKDTLMGPGPGSR
Ga0105248_1057140313300009177Switchgrass RhizosphereLEKLTELQSRTIEGVGMLLSTPASPEEKVAEAEALVRHFQELKSALTEPGGR*
Ga0126313_1002719643300009840Serpentine SoilVGTEQAGELTELQSRTIEVVAMVLATSAPPEARVAEAGALVRHYQELNDTLVEPGTGRRDPGE*
Ga0126313_1004965043300009840Serpentine SoilMYNFASLERSKLEKLTELQSRTIDGLGMLLATPAPPEAKVAEADELVRHYRELKDTLIGPAPTSRDASD*
Ga0126313_1028179123300009840Serpentine SoilMHNFAGWERGKLEKLTELQSRTIDGLSMLLATSASPEAKVAEAEEFVRRYRELKDTLAGPGTGSPDARNK*
Ga0126305_1045019423300010036Serpentine SoilLGTEQAGELTELQSRTIEVVAMVLATAAPPEARVAEAGALVRHYQELNDTLVEPGTGSRNPGE*
Ga0126304_1016127823300010037Serpentine SoilMHNFASLERSKLEKLTELQSRTIDGLGMLLATPAPPEAKVAEADELVRHYRELKDTLIGPAPTTRDASD*
Ga0126304_1096593913300010037Serpentine SoilLGTEQAGELTELQSRTIEVVTMVLATSAPPEARVAEAGALVRHYQELNDTLVEPGTGSRNPGE*
Ga0126315_1103042413300010038Serpentine SoilMHNFASLERSKLEKLTELQSRTIDGLGMLLAAPAPPEAKVAEADEIVRHYRELKDTLIGPAPAGRDAGD*
Ga0126308_1052995723300010040Serpentine SoilGWDRSKLEKLVELQSRTIDGVGMVLGTPAPPEAKVAEADALVRHYKELKDTMIEPGPRSLDAGS*
Ga0126314_1108112913300010042Serpentine SoilMHNFASLERSKLEKLIELQSRTIDGLGMLLAAPAPPEAKVAEADEIVRHYRELKDTLIGPAPAGR
Ga0126311_1063545823300010045Serpentine SoilMHNFASLERSKLEKLTELQSRTIDGLGMLLATPAPPEAKVAEADELVRHYRELKDTLIGPAPTSRDASD*
Ga0126311_1108113523300010045Serpentine SoilLTELQSRTIDGLSMVLATSASPEAKVAEAEEFVRRYRELKDTLVGPGTGSPDARNK*
Ga0126306_1002484133300010166Serpentine SoilMHNFASLERSKLEKLTELQSRTIDGLGMLLATPAPPEAKVAEADELVRHYRELKDTLIGPASTSRDASD*
Ga0126306_1182975923300010166Serpentine SoilHDFASLERSKLEKLIELQSRTIDGLGMLLAAPAPPEAKVAEADELVRHYRELKDTLIGPAPASRDAGD*
Ga0134122_1223824923300010400Terrestrial SoilLAGKTGGGRCRVQNFSGWERSKLERLTELQSRTIEGVGMLLSTPASPEEKVAEAEALVRHFQELKNALTEPGGR*
Ga0134123_1257237913300010403Terrestrial SoilMHNFAGWERSELEKLTELQSRTIDGLGMVLSTSAPPEAKVAEAEELVRHFRELKDTLAGPRTSRDSRK*
Ga0150985_10651707213300012212Avena Fatua RhizosphereVYSFSGWERSKVDQLVELQSRTIELVGMVLATPAPPETKVVEAEELIRHFRELRDTLTEQATTQGRSP*
Ga0150985_11911876413300012212Avena Fatua RhizosphereMGNFAGWDRNKLERLVELQSRTLDGVGMVLGTPAPPEAKVAEADALVRHYKELKDTLIEPAPRNPDVGS*
Ga0150984_10728532113300012469Avena Fatua RhizosphereLDRSKLEKLTELQSRTIETVGMLLSTPASPEEKVAEAEALVRHFQELKNALTEANAPSAR
Ga0150984_11886768913300012469Avena Fatua RhizosphereRRHRVQNFSGWERSKLERLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFRELKNALTDGQAPTAR*
Ga0157314_100971513300012500Arabidopsis RhizosphereVQNFSGWERSKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEAEALVRHYRELKNALTDAKAPAAP*
Ga0157286_1019373213300012908SoilVHNLARWERSKLEKLTELQSRTIEGLGMVLATPAPPEAKVAEADALVRHYRELKDALVEPGTGS
Ga0164301_1048861223300012960SoilVYNFSGWERSKLDQLVELQSRTIDLVGMVLATPAPPETKLAEAEELIRHYQELKETLAEQGTTQARSP*
Ga0164308_1145852213300012985SoilTEGRCRVQNFSGWERSKLERLTELQSRTIEGVGMLLSTPASPEEKVAEAEALVRHFQELKSALTEPGGR*
Ga0157374_1162482513300013296Miscanthus RhizosphereLAERPAERYRVQNFAGWDRSKLERLAELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFQELKNALSEAPTAR*
Ga0163162_1275346723300013306Switchgrass RhizosphereVQNFSGWERSKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFQELKSALTEPGG
Ga0157372_1042287013300013307Corn RhizosphereLADTPRQRRYRVQNFSGWERSKLERLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFRELKNALTEGQAPTAR*
Ga0157380_1198294113300014326Switchgrass RhizosphereMQDFASLERSKLEKLTELQSRTIDGLGMVLATPAPAEAKVAEADELVRHFRELKET
Ga0182007_1040203023300015262RhizosphereLAERPAERYRVQNFAGWDRSKLERLAELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFQELKNALSEAPT
Ga0132258_1045687623300015371Arabidopsis RhizosphereVPNFEGWDRSKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEAEALVRHYRELKNALTDAKAPAAP*
Ga0132258_1063992813300015371Arabidopsis RhizosphereVHNFSGWERSKLEELIELQSRTIEVVGMVLATPAPPETKVAEAEEFIRHYQELKNSLAEQGTTPGRSA*
Ga0132258_1108036723300015371Arabidopsis RhizosphereMERSKLEKLIELQSRTIEGLGMLLAAPAPPEAKVAEADALGRHFQELKATLVGPGTSDATR*
Ga0132258_1213668823300015371Arabidopsis RhizosphereMERSKLEKLTELQSRTIEGLGMLLAAPAPPEAKVAEADALVRHFQELKATLVGPGTGSRDATR*
Ga0132256_10059903633300015372Arabidopsis RhizosphereMERSKLEKLIELQSRTIEGLGMLLAAPAPPEAKVAEADALVRHFQELKATLVGPGTGSRDATR*
Ga0132257_10167855313300015373Arabidopsis RhizosphereMERSKLEKLTELQSRTIEGLGMLLAAPAPPEAKVAEADALVRHFQELKATLVGPGTESRDATR*
Ga0132257_10381941913300015373Arabidopsis RhizosphereMERSKLEKLTELQSRTIEGLGMLLAPPAPPKAKVAEADALVRHFQELKATLVGPGTGSRDATR*
Ga0163161_1067652123300017792Switchgrass RhizosphereVYNFSGWERSKLDQLVELQSRTIELLGMVLATPAPPETKVAEAAELIRHFQELRDTLTEQATTQGRSP
Ga0163161_1115073013300017792Switchgrass RhizosphereMQNFASLERSKLEKLTELQSRTIDGLGMVLATPAPPEAKVAEADELVRHYRELKDTLMGPGPGSRDAGD
Ga0184624_1021937113300018073Groundwater SedimentVYSFSGWERSKLDQLVELQSRTIELVGMVLATPAPPETKVAEAAELIRHFQELRDTLTGQATTQGRSP
Ga0190274_1068613523300018476SoilVYNFSGWERSKLDQLAELQSRTIELVGMVLATPAPPETKVAEAEELIRHFQELRGTLADQGTTQGHSP
Ga0190271_1323798713300018481SoilELQSRTIELVGMVLATPAPPETKVAEAEELIRHFQELRGTLAEQGTTQERSP
Ga0173481_1086141023300019356SoilVHNLARWERSKLEKLTELQSRTIEGLGMVLATPAPPEAKVAEADALVRHYRELKDALFEPGTGSLDDAGD
Ga0222622_1000409333300022756Groundwater SedimentVYSFSGWERSKLDQLVELQSRTIELLGMVLATPAPPETKVAEAAELIRHFQELRDTLTEQATTQGRSP
Ga0207697_1004729913300025315Corn, Switchgrass And Miscanthus RhizosphereVQNFSGWERSKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFQELKSALTEPGGR
Ga0207656_1007787113300025321Corn RhizosphereVQNFSGWERSKLERLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFRELKNALTEGQAPTAR
Ga0207682_1012167733300025893Miscanthus RhizosphereGMQNFASLERSKLEKLTELQSRTIDGLGMVLATPAPPEAKVAEADELVRHYRELKDTLMGPGPGSRDAGD
Ga0207642_1006174823300025899Miscanthus RhizosphereVQNFSGWERSKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEAEALVRHFQELKSALTEPGGR
Ga0207680_1063179913300025903Switchgrass RhizosphereVQNFSGWERSKLERLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFRELKNALTE
Ga0207680_1073327423300025903Switchgrass RhizosphereVQNFAGWDRSKLERLAELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFQELKSALTEP
Ga0207647_1013324413300025904Corn RhizosphereVQNFSGWERSKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFQELKSALTEAGGR
Ga0207705_1107047713300025909Corn RhizosphereVQNFSGWERSKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFRELKNALTEGQAPTAR
Ga0207649_1071599013300025920Corn RhizosphereMDNFAGWERSKLEKLTELQSRTIDGLGMVLSTSAPPEAKVAEAEELVRHFRELKDTLAGPQTSRDSRK
Ga0207650_1000726433300025925Switchgrass RhizosphereVQNFAGWDRSKLERLAELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFQELKNALSEAPTAR
Ga0207650_1058093223300025925Switchgrass RhizosphereVYSFSGWERSKLDQLVELQSRTIELVGMVLATPAPPETKVAEAAELIRHFQELRDTLTEQATTQGRSP
Ga0207650_1076355023300025925Switchgrass RhizosphereMQNFASLERSKLEKLTELQSRTIDGLGMVLATPAPPEAKVAEAEELVRHFRELKDTLAGPRTSRDSRK
Ga0207659_1127187813300025926Miscanthus RhizosphereMQNFASLERSKLEKLTELQSRTIDGLGMLLATPAPPEAKVAEADELVRHYRELKDTLMGPGPGSRDAGD
Ga0207644_1048696423300025931Switchgrass RhizosphereVQNFSGWERSKLEKLTELQSRTIETVGMLLSTPASPEEKVAEAEALVRHFQELKNA
Ga0207644_1073094613300025931Switchgrass RhizosphereSKLEKLTELQSRTIETVGMLLSTPASPEEKVAEAEALVRHFRELKNALTEAKASTVR
Ga0207644_1116716823300025931Switchgrass RhizosphereTEGRCRVQNFSGWERSKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEAEALVRHFQELKSALTEPGGR
Ga0207690_1047816813300025932Corn RhizosphereGGRYRVQNFAGWDRSKLERLTELQSRTIEGVGMVLSTPASPEEKVAEADALLRHYLELKNELTEAKASTVR
Ga0207709_1135728623300025935Miscanthus RhizosphereRRPRLAGKTGRRRCRVQNFSGWERSKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFQELKSALTEPGGR
Ga0207669_1119846023300025937Miscanthus RhizosphereVQNFAGWDRSKLERLAELQSRTIEGVGMLLSTPASPEEKVAEAEALVRHFHELKNALTEA
Ga0207691_1117988623300025940Miscanthus RhizosphereVDSFSGWERSKLDQLVELQSRTIELVGVVLATPAPPETKVAEAQELIRHFRELRDTLTVQATTQGRSP
Ga0207711_1005016673300025941Switchgrass RhizosphereDSFSGWERSKLDQLVELQSRTIELVGMVLATPAPPETKVAEAAELIRHFQELRDTLTEQATTQGRSP
Ga0207711_1045355123300025941Switchgrass RhizosphereVQNFAGWDRSKLERLTELQSRTIEGVGMVLSTPASPEERSRKRDALLRHYLELKNELTEAKASTVR
Ga0207661_1046350433300025944Corn RhizosphereVARLDWPDTPRQRRYRVQNFSGWERSKLERLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFRELKNALTEGQAPTAR
Ga0207661_1116593113300025944Corn RhizosphereMDNFAGWERSKLEKLTELQSRTIDGLGMVLSTSAPPEAKVAEAEELVRHFRELKDTLAGPQTSRDSR
Ga0207651_1034266623300025960Switchgrass RhizosphereVDSFSGWERSKLDQLVELQSRTIELVGMVLATPAPPETKVAEAVELIRHFQELRDTLTEQATTQGRSP
Ga0207651_1038668413300025960Switchgrass RhizosphereWPDTPRQRRYRVQNFSGWERSKLERLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFRELKNALTEGQAPTAR
Ga0207651_1170038013300025960Switchgrass RhizosphereMQDFASLERSKLEKLTELQSRTIDGLGMVLATPAPAEAKVAEADELVRHFRELKEMLMGPGPGSKDAGG
Ga0207640_1202889313300025981Corn RhizosphereHLDWPRDPAERYRVQNFAGWDRSKLERLAELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFQELKNALSEAPTAR
Ga0207678_1155528123300026067Corn RhizosphereVYSFSGWERSKVDQLVELQSRTIELVGMVLATPAPPETKVAEAAELIRHFQELRDTLTEQATTQGRSP
Ga0207708_1003026043300026075Corn, Switchgrass And Miscanthus RhizosphereVQNFSGWERSKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFQELKSALTEAKAPTAP
Ga0207648_1018664123300026089Miscanthus RhizosphereMQNFASLERSKLEKLTELQSRTIDGLGMLLATPAPAEAKVAEADELVRHFRELKEMLIGPGPGSKDAGG
Ga0207648_1041874423300026089Miscanthus RhizosphereVQNFSGWERSKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEAEALVRHFHELKNALTEAKASTVR
Ga0207683_1041343513300026121Miscanthus RhizosphereVQNFAGWDRSKLERLAELQSRTIEGVGMLLSTPASPEEKVAEAEALVRHFHELKNALTEAKASTVR
Ga0207698_1019443823300026142Corn RhizosphereVQNFAGWDRSKLERLTELQSRTIEGVGMVLSTPASPEEKVAEADALLRHYLELKNELTEAKASTVR
Ga0207698_1189893323300026142Corn RhizosphereVQNFAGWDRSKLERLAELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFQELKSALTEPGGR
Ga0209811_1000315213300027821Surface SoilVYNFSGWERSKLDQLVELQSRTIDLVGMVLATPAPPETKLAEAEELIRHYQELKETLAEQGTTQARSP
Ga0209481_1011184023300027880Populus RhizosphereVNDLARWERSKLEKLTELQSRTIEGLGMLLAAPAPPEAKVAEADALVRHYKELKDALIEPGAGRRDDAGG
Ga0209382_1018659833300027909Populus RhizosphereVNNFAEWERSKLEKLTELQSRTIEGLGMLLAAPAPAEAKVAEADALVRHYQELKDTLVEPGTGKRPGGK
Ga0209382_1039354513300027909Populus RhizosphereVNDLARWERSKLEKLTELQSRTIEGLGMLLAAPAPPEAKVAEADALVRHYKELKDALIEPGTARLDDARG
Ga0209382_1099352723300027909Populus RhizosphereMHNFAGLERSKLEKLIELQSRTIDGLGMLLAAPAPPEAKVAEADELVRHYRELKDTLIGPEPASHDAGR
Ga0310888_1042160913300031538SoilMHNFASLERSKLEKLTELQSRTIDGLGMVLATPAPPEAKVAEADELVRHYRELKDTLMGPGPGSRDAGD
Ga0310886_1017216313300031562SoilVQNFSGWERCKLEKLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFQELKSALTEP
Ga0310813_1173019123300031716SoilVQNFAGWDRSKLERLAELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFQELKNALS
Ga0307413_1053728723300031824RhizosphereGGGRVHNFAGLERGKLEKLAELQSRTIEGVGMVLATPAPPEAKVAEADAIVRHYRELKDEMIEPVTGGRGAGT
Ga0310907_1023063123300031847SoilMHNFASLERSKLEKLTELQSRTIDGLGMVLATPAPPEAKVAEADELVRHFRELKDTLLGPAPASRDAGD
Ga0307410_1001515733300031852RhizosphereVGNFAGLDRSKLEKLTELQSRTIEGLGMVLATPAPPETKVEEAGALVRHYQELKDTLLGAGTGSRDASK
Ga0310892_1011958623300031858SoilMHNFASLERSKLEKLTELQSRTLDGLGMVLATPAPPEAKVAEADELVRHYRELKDTLMGPGPGSRDAGD
Ga0307406_1026324523300031901RhizosphereVGNFAGLDRSKLEKLTELQSRTIEGLGMVLATPAPPETKVEEAGALVRHYQELKDTLLGAGTGIRDASK
Ga0310900_1024153523300031908SoilMHNFASLERSKLEKLTELQSRTLDGLGMVLATPAPPEAKVAEADELVRHFRELKDTLLGPAPASRDAGD
Ga0308175_10017895513300031938SoilVQNFSGWERSKLERLAELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFRELQNALTDGQAPTPR
Ga0308175_10135184413300031938SoilVYSFSGWERSKVDQLVELQSRTIELVGMVLATPAAPETKVAEAAELIRHFQELRDTLTEQATTQGRSP
Ga0308175_10274747223300031938SoilRRYRVQNFSGWERSKLERLTELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFRELKNALTEGQAPTAR
Ga0308174_1102773623300031939SoilMGNFAGWDRNKLERLVELQSRTLDGVGMVLGTPAPPEAKVAEADALVRHYKELKDTLIEPAPRNPDVGA
Ga0307416_10182253313300032002RhizosphereMHNFASLERSKLEKLIELQSRTIDGLGMLLATPAPPEAKVAEADELVRHYRELKDTLIGPAPASRDAGD
Ga0307414_1084016013300032004RhizosphereVGNFAGLDRSKLEKLTELQSRTIEGVGMVLATPAPSEAKVAEAEAIVRHYQELKDELIEP
Ga0310906_1129403913300032013SoilMRRVHDLASWERSQLEKLTELQTRTIEGLGMLLATPAPPEAKVAEADALVRHYQELKAALIEPGTGRLDRGG
Ga0310889_1008414623300032179SoilMQNFASLERSKLEKLTELQSRTIDGLGMVLATPAPPEAKVAEADELVRHYRELKDTLLGPAPASRDAGD
Ga0310812_1048447513300032421SoilMHDFARWERSKLEKLTELQSRTIEGLGMLLATPAPPEAKVAEADALVRHYQELKDTLVGAKAGSRDAAK
Ga0310811_1146749213300033475SoilVQNFAGWDRSKLERLAELQSRTIEGVGMLLSTPASPEEKVAEVEALVQHFQELKSALTEAGGR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.