Metagenome / Metatranscriptome Family F036413

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F036413
Family Type	Metagenome / Metatranscriptome
Number of Sequences	170
Average Sequence Length	60 residues
Representative Sequence	MRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEEGSSPPDVPKVDAGGSPE
Number of Associated Samples	96
Number of Associated Scaffolds	169

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.68 %
% of genes near scaffold ends (potentially truncated)	40.00 %
% of genes from short scaffolds (< 2000 bps)	77.06 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.765 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (30.000 % of family members)
Environment Ontology (ENVO)	Unclassified (33.529 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (33.529 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.67% β-sheet: 8.33% Coil/Unstructured: 55.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 169 Family Scaffolds
PF06772	LtrA	24.85
PF02566	OsmC	3.55
PF16177	ACAS_N	2.96
PF04542	Sigma70_r2	2.37
PF03861	ANTAR	1.78
PF08281	Sigma70_r4_2	1.18
PF13492	GAF_3	1.18
PF02585	PIG-L	0.59
PF13185	GAF_2	0.59
PF07508	Recombinase	0.59
PF04909	Amidohydro_2	0.59
PF05239	PRC	0.59
PF16203	ERCC3_RAD25_C	0.59
PF01425	Amidase	0.59
PF12706	Lactamase_B_2	0.59
PF06271	RDD	0.59

COG ID	Name	Functional Category	% Frequency in 169 Family Scaffolds
COG4292	Low temperature requirement protein LtrA (function unknown)	Function unknown [S]	24.85
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	3.55
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	3.55
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	2.37
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	2.37
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	2.37
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	2.37
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	1.78
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.59
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.59
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.59
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.59

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.76 %
Unclassified	root	N/A	48.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.76 %
Unclassified	root	N/A	48.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.76 %
Unclassified	root	N/A	48.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.24 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	31.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.24 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25.88 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	2.35 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.24 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12.94 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	5.29 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.35 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1.18 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.24 %
Euzebyales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales	5.29 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	2.35 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.76 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	1.18 %
Sporichthyales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales	0.59 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.24 %
Euzebyales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales	5.29 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	2.35 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.76 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1.18 %
Sporichthyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae	0.59 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.24 %
Euzebyales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales	5.29 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	2.35 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.76 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1.18 %
unclassified Sporichthyaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → unclassified Sporichthyaceae	0.59 %
Burkholderia plantarii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia plantarii	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.24 %
Euzebyales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales	5.29 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	2.35 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.76 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1.18 %
Sporichthyaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → unclassified Sporichthyaceae → Sporichthyaceae bacterium	0.59 %
Burkholderia plantarii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia plantarii	0.59 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0800861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1241	Open in IMG/M
3300000956\|JGI10216J12902_113866480	Not Available	666	Open in IMG/M
3300003373\|JGI25407J50210_10002905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4081	Open in IMG/M
3300003373\|JGI25407J50210_10012148	All Organisms → cellular organisms → Bacteria	2206	Open in IMG/M
3300003373\|JGI25407J50210_10061438	All Organisms → cellular organisms → Bacteria → Terrabacteria group	943	Open in IMG/M
3300003373\|JGI25407J50210_10089723	Not Available	761	Open in IMG/M
3300003373\|JGI25407J50210_10094788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	738	Open in IMG/M
3300003373\|JGI25407J50210_10141020	Not Available	593	Open in IMG/M
3300003373\|JGI25407J50210_10172458	Not Available	533	Open in IMG/M
3300004016\|Ga0058689_10097693	Not Available	617	Open in IMG/M
3300005444\|Ga0070694_101171178	Not Available	643	Open in IMG/M
3300005562\|Ga0058697_10123435	Not Available	1102	Open in IMG/M
3300005562\|Ga0058697_10284749	Not Available	783	Open in IMG/M
3300005562\|Ga0058697_10478663	Not Available	632	Open in IMG/M
3300005562\|Ga0058697_10534267	Not Available	603	Open in IMG/M
3300005562\|Ga0058697_10713846	Not Available	534	Open in IMG/M
3300005562\|Ga0058697_10804174	Not Available	509	Open in IMG/M
3300005937\|Ga0081455_10023523	All Organisms → cellular organisms → Bacteria	5731	Open in IMG/M
3300005981\|Ga0081538_10013237	All Organisms → cellular organisms → Bacteria	6545	Open in IMG/M
3300005981\|Ga0081538_10017442	All Organisms → cellular organisms → Bacteria	5448	Open in IMG/M
3300005981\|Ga0081538_10022004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4633	Open in IMG/M
3300005981\|Ga0081538_10024125	All Organisms → cellular organisms → Bacteria	4342	Open in IMG/M
3300005981\|Ga0081538_10035130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3299	Open in IMG/M
3300005981\|Ga0081538_10038330	All Organisms → cellular organisms → Bacteria	3094	Open in IMG/M
3300005981\|Ga0081538_10048492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2589	Open in IMG/M
3300005981\|Ga0081538_10069748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1945	Open in IMG/M
3300005985\|Ga0081539_10046097	All Organisms → cellular organisms → Bacteria	2501	Open in IMG/M
3300005985\|Ga0081539_10047520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2450	Open in IMG/M
3300005985\|Ga0081539_10062359	All Organisms → cellular organisms → Bacteria	2038	Open in IMG/M
3300006049\|Ga0075417_10073820	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300006058\|Ga0075432_10102093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1061	Open in IMG/M
3300006169\|Ga0082029_1331106	Not Available	556	Open in IMG/M
3300006880\|Ga0075429_100355372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1283	Open in IMG/M
3300009094\|Ga0111539_10203594	All Organisms → cellular organisms → Bacteria	2307	Open in IMG/M
3300009162\|Ga0075423_12239729	Not Available	594	Open in IMG/M
3300009789\|Ga0126307_10135563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales	1967	Open in IMG/M
3300009789\|Ga0126307_10515724	Not Available	965	Open in IMG/M
3300009789\|Ga0126307_10799286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	761	Open in IMG/M
3300009840\|Ga0126313_10004349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8352	Open in IMG/M
3300009840\|Ga0126313_10049231	All Organisms → cellular organisms → Bacteria	2964	Open in IMG/M
3300009840\|Ga0126313_10513281	Not Available	961	Open in IMG/M
3300009840\|Ga0126313_10741824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	797	Open in IMG/M
3300009840\|Ga0126313_10947479	Not Available	704	Open in IMG/M
3300010036\|Ga0126305_10309229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1027	Open in IMG/M
3300010037\|Ga0126304_11263473	Not Available	506	Open in IMG/M
3300010037\|Ga0126304_11273028	Not Available	504	Open in IMG/M
3300010038\|Ga0126315_10183609	Not Available	1253	Open in IMG/M
3300010038\|Ga0126315_10183609	Not Available	1253	Open in IMG/M
3300010038\|Ga0126315_10247907	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1086	Open in IMG/M
3300010040\|Ga0126308_10771068	Not Available	665	Open in IMG/M
3300010041\|Ga0126312_10053193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2715	Open in IMG/M
3300010041\|Ga0126312_10253171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1237	Open in IMG/M
3300010041\|Ga0126312_10767361	Not Available	698	Open in IMG/M
3300010045\|Ga0126311_10039051	All Organisms → cellular organisms → Bacteria	2981	Open in IMG/M
3300010145\|Ga0126321_1265362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → unclassified Sporichthyaceae → Sporichthyaceae bacterium	560	Open in IMG/M
3300010145\|Ga0126321_1395278	Not Available	529	Open in IMG/M
3300010166\|Ga0126306_10023655	All Organisms → cellular organisms → Bacteria	4083	Open in IMG/M
3300010395\|Ga0058701_10706056	Not Available	553	Open in IMG/M
3300012021\|Ga0120192_10107158	Not Available	572	Open in IMG/M
3300012893\|Ga0157284_10223455	Not Available	580	Open in IMG/M
3300014487\|Ga0182000_10056473	Not Available	1194	Open in IMG/M
3300014487\|Ga0182000_10508084	Not Available	562	Open in IMG/M
3300014488\|Ga0182001_10056361	Not Available	1080	Open in IMG/M
3300014965\|Ga0120193_10105101	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300015265\|Ga0182005_1133207	Not Available	714	Open in IMG/M
3300017997\|Ga0184610_1158254	Not Available	746	Open in IMG/M
3300018000\|Ga0184604_10013622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales	1787	Open in IMG/M
3300018000\|Ga0184604_10265276	Not Available	602	Open in IMG/M
3300018027\|Ga0184605_10099870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1280	Open in IMG/M
3300018051\|Ga0184620_10049479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1177	Open in IMG/M
3300018051\|Ga0184620_10289522	Not Available	552	Open in IMG/M
3300018061\|Ga0184619_10117324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales	1203	Open in IMG/M
3300018061\|Ga0184619_10478512	Not Available	552	Open in IMG/M
3300018066\|Ga0184617_1008748	All Organisms → cellular organisms → Bacteria	1952	Open in IMG/M
3300018066\|Ga0184617_1010490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales	1839	Open in IMG/M
3300018072\|Ga0184635_10119936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1045	Open in IMG/M
3300018073\|Ga0184624_10018009	All Organisms → cellular organisms → Bacteria	2592	Open in IMG/M
3300018074\|Ga0184640_10306253	Not Available	721	Open in IMG/M
3300018075\|Ga0184632_10486631	Not Available	507	Open in IMG/M
3300018076\|Ga0184609_10331142	Not Available	711	Open in IMG/M
3300018077\|Ga0184633_10505217	Not Available	586	Open in IMG/M
3300018078\|Ga0184612_10021833	All Organisms → cellular organisms → Bacteria	3293	Open in IMG/M
3300018081\|Ga0184625_10225855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	981	Open in IMG/M
3300018429\|Ga0190272_12933970	Not Available	528	Open in IMG/M
3300018432\|Ga0190275_11807103	Not Available	690	Open in IMG/M
3300018465\|Ga0190269_11876868	Not Available	515	Open in IMG/M
3300018466\|Ga0190268_10278776	Not Available	985	Open in IMG/M
3300018466\|Ga0190268_11396236	Not Available	599	Open in IMG/M
3300018466\|Ga0190268_11759142	Not Available	556	Open in IMG/M
3300018466\|Ga0190268_12268189	Not Available	510	Open in IMG/M
3300018469\|Ga0190270_10131907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1990	Open in IMG/M
3300018476\|Ga0190274_10018779	All Organisms → cellular organisms → Bacteria	4490	Open in IMG/M
3300018476\|Ga0190274_11963184	Not Available	681	Open in IMG/M
3300019377\|Ga0190264_10111502	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1313	Open in IMG/M
3300019377\|Ga0190264_10664683	Not Available	760	Open in IMG/M
3300019377\|Ga0190264_10961079	Not Available	677	Open in IMG/M
3300019377\|Ga0190264_12087950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	523	Open in IMG/M
3300019767\|Ga0190267_10069395	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300019767\|Ga0190267_10414520	All Organisms → cellular organisms → Bacteria → Terrabacteria group	758	Open in IMG/M
3300019767\|Ga0190267_10938225	Not Available	598	Open in IMG/M
3300019767\|Ga0190267_11232161	Not Available	552	Open in IMG/M
3300019767\|Ga0190267_11659432	Not Available	503	Open in IMG/M
3300019884\|Ga0193741_1154122	Not Available	565	Open in IMG/M
3300020016\|Ga0193696_1067593	Not Available	933	Open in IMG/M
3300021078\|Ga0210381_10011459	All Organisms → cellular organisms → Bacteria	2161	Open in IMG/M
3300021078\|Ga0210381_10084432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1009	Open in IMG/M
3300022694\|Ga0222623_10087899	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300022756\|Ga0222622_10067017	All Organisms → cellular organisms → Bacteria	2097	Open in IMG/M
3300025972\|Ga0207668_10382667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales	1185	Open in IMG/M
3300026790\|Ga0208710_101693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1133	Open in IMG/M
3300027718\|Ga0209795_10022989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2162	Open in IMG/M
3300027750\|Ga0209461_10022134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1159	Open in IMG/M
3300027750\|Ga0209461_10026968	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300027750\|Ga0209461_10053963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	824	Open in IMG/M
3300027750\|Ga0209461_10067673	Not Available	758	Open in IMG/M
3300027809\|Ga0209574_10031455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1269	Open in IMG/M
3300027809\|Ga0209574_10048671	Not Available	1073	Open in IMG/M
3300027873\|Ga0209814_10017284	All Organisms → cellular organisms → Bacteria	2897	Open in IMG/M
3300028708\|Ga0307295_10135792	Not Available	678	Open in IMG/M
3300028710\|Ga0307322_10033417	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300028712\|Ga0307285_10223376	Not Available	531	Open in IMG/M
3300028712\|Ga0307285_10241315	Not Available	512	Open in IMG/M
3300028716\|Ga0307311_10191875	Not Available	597	Open in IMG/M
3300028716\|Ga0307311_10239433	Not Available	538	Open in IMG/M
3300028718\|Ga0307307_10062930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales	1099	Open in IMG/M
3300028718\|Ga0307307_10118500	Not Available	815	Open in IMG/M
3300028719\|Ga0307301_10157823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	731	Open in IMG/M
3300028719\|Ga0307301_10308542	Not Available	519	Open in IMG/M
3300028722\|Ga0307319_10027439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	1756	Open in IMG/M
3300028722\|Ga0307319_10129585	Not Available	815	Open in IMG/M
3300028722\|Ga0307319_10131874	Not Available	807	Open in IMG/M
3300028771\|Ga0307320_10013144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales	2964	Open in IMG/M
3300028771\|Ga0307320_10020091	All Organisms → cellular organisms → Bacteria	2410	Open in IMG/M
3300028771\|Ga0307320_10046919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1591	Open in IMG/M
3300028771\|Ga0307320_10399521	Not Available	551	Open in IMG/M
3300028784\|Ga0307282_10487573	Not Available	599	Open in IMG/M
3300028796\|Ga0307287_10134133	Not Available	939	Open in IMG/M
3300028875\|Ga0307289_10248035	All Organisms → cellular organisms → Bacteria → Terrabacteria group	732	Open in IMG/M
3300028875\|Ga0307289_10296829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	665	Open in IMG/M
3300028878\|Ga0307278_10000271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	26604	Open in IMG/M
3300028878\|Ga0307278_10022832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales	2883	Open in IMG/M
3300028878\|Ga0307278_10235969	Not Available	813	Open in IMG/M
3300028881\|Ga0307277_10153257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1000	Open in IMG/M
3300028881\|Ga0307277_10185813	All Organisms → cellular organisms → Bacteria → Terrabacteria group	908	Open in IMG/M
3300028884\|Ga0307308_10560487	Not Available	548	Open in IMG/M
3300030499\|Ga0268259_10156860	Not Available	544	Open in IMG/M
3300030510\|Ga0268243_1058629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	845	Open in IMG/M
3300030513\|Ga0268242_1039664	Not Available	860	Open in IMG/M
3300030516\|Ga0268255_10132606	Not Available	736	Open in IMG/M
3300031091\|Ga0308201_10360601	Not Available	536	Open in IMG/M
3300031548\|Ga0307408_100051020	All Organisms → cellular organisms → Bacteria	2978	Open in IMG/M
3300031548\|Ga0307408_100120029	All Organisms → cellular organisms → Bacteria	2035	Open in IMG/M
3300031731\|Ga0307405_10038683	All Organisms → cellular organisms → Bacteria	2878	Open in IMG/M
3300031731\|Ga0307405_11531513	Not Available	587	Open in IMG/M
3300031824\|Ga0307413_11583278	Not Available	581	Open in IMG/M
3300031852\|Ga0307410_10030027	All Organisms → cellular organisms → Bacteria	3469	Open in IMG/M
3300031901\|Ga0307406_10006095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6626	Open in IMG/M
3300031901\|Ga0307406_10241363	Not Available	1355	Open in IMG/M
3300031903\|Ga0307407_10184057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia plantarii	1387	Open in IMG/M
3300031995\|Ga0307409_100136937	All Organisms → cellular organisms → Bacteria	2103	Open in IMG/M
3300031995\|Ga0307409_100435118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales	1262	Open in IMG/M
3300032005\|Ga0307411_10104238	All Organisms → cellular organisms → Bacteria	2014	Open in IMG/M
3300032005\|Ga0307411_10721078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	871	Open in IMG/M
3300032005\|Ga0307411_11543078	Not Available	611	Open in IMG/M
3300032005\|Ga0307411_11630339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	596	Open in IMG/M
3300032080\|Ga0326721_10431360	Not Available	770	Open in IMG/M
3300032126\|Ga0307415_100102735	All Organisms → cellular organisms → Bacteria	2101	Open in IMG/M
3300032159\|Ga0268251_10488549	Not Available	549	Open in IMG/M
3300034172\|Ga0334913_124956	Not Available	547	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.12%
Host-Associated	Host-Associated	35.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.41%
Plants	Host-Associated → Plants	35.88%
Aquatic	Environmental → Aquatic	14.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.12%
Sediment	Environmental → Aquatic → Sediment	11.76%
Roots	Host-Associated → Plants → Roots	8.82%
Phylloplane	Host-Associated → Plants → Phylloplane	7.06%
Phyllosphere	Host-Associated → Plants → Phyllosphere	3.53%
Freshwater	Environmental → Aquatic → Freshwater	2.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.35%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.76%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	8.82%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	7.06%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	3.53%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.35%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.76%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.18%
Loam	Environmental → Terrestrial → Soil → Loam	1.18%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.76%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	8.82%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	7.06%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	3.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.35%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.76%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.18%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.18%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.59%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	30.00%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	11.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	10.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	9.41%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	8.82%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	7.06%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.53%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	3.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.94%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.35%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.76%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.18%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.18%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	1.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.18%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.59%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.59%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.59%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010395	Agave microbial communities from Guanajuato, Mexico - Or.Ma.e	Host-Associated	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014965	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T2	Environmental	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026790	Grasslands soil microbial communities from Gorham, Kansas, USA that are Nitrogen fertilized -NN607 (SPAdes)	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030499	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030513	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG (v2)	Environmental	Open in IMG/M
3300030516	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_08008612	3300000033	Soil	MRYRVTWNVEVDADDEGQARTAARQYLLENEDEALSKVVGLEEGSSPPDIPKVDAGGSPAI*
JGI10216J12902_1138664801	3300000956	Soil	AMRYRVTWNVEVDADDEGKARTAARQYLLDNEDEALSKVVALAEGSSPPDIPKVDAGGSPTI*
JGI25407J50210_100029054	3300003373	Tabebuia Heterophylla Rhizosphere	MRYRVTWNVEVEADDEAQAREAARQYLLDNEDEALSKVVALEEGSTPRDVPKVDAD*
JGI25407J50210_100121483	3300003373	Tabebuia Heterophylla Rhizosphere	MRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEKGSSPPDVPKVDAGGSPEL*
JGI25407J50210_100614382	3300003373	Tabebuia Heterophylla Rhizosphere	MRYRVTWNVEVDADDEGQARTAARQFLMESEDEALSKVVALEEGSSPADVPKVDAGGTPSI*
JGI25407J50210_100897232	3300003373	Tabebuia Heterophylla Rhizosphere	MRYRVTWNVEVDADDEGQARTAARQFLRDNEDEALSKVVALEEGSTPADVPKVDAGGTPSI*
JGI25407J50210_100947882	3300003373	Tabebuia Heterophylla Rhizosphere	MRYRVTWNVEVEADDEGQARTAARQYLLENEDEALSKVVALEDGSSPPDVPKVDAGGTAEL*
JGI25407J50210_101410201	3300003373	Tabebuia Heterophylla Rhizosphere	MRYRVTWNVEVDADDEGQARTAARQFLMDNEDEALSKVVALEEGSSPADVPKVDAGGTPSI*
JGI25407J50210_101724581	3300003373	Tabebuia Heterophylla Rhizosphere	MRYRVTWNVEVDANDEGQARTAARQYLLENEDEALSKVVALEEGSSPPDVPKVDAGGSPEL*
Ga0058689_100976931	3300004016	Agave	MRYRVTWNVEIDADDETQARTAARQYLLDHEDEALSKVVALEEGSSPRDVPKVDAG*
Ga0070694_1011711782	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEEGSSPPDVPKVDAGGSPEI*
Ga0058697_101234352	3300005562	Agave	MRYRVTWNVEVDADDEGQARTAAREYLLNNEDEALSKVVALEEGSSPPDVPKVDAGGSPAI*
Ga0058697_102847492	3300005562	Agave	MRYRVTWNVEVEADDEGQARTAARQFLLDNEDEALSKVVALEEGSSPADVPKVDAGGSPTI*
Ga0058697_104786631	3300005562	Agave	MRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEDGSAPPDVPKVDAGGTPSI*
Ga0058697_105342671	3300005562	Agave	GPALPKTPEAAMRYRVTWNVEVDADDEGQARSAARQYLLDNEDEALSKVVALEEGSSPPDVPKVDAGGSPAI*
Ga0058697_107138461	3300005562	Agave	MRYRVTWNVEVEADDEGQARTAARQFLLENEDEALSKVVALEEGSSPADVPKVDAGGSPAI*
Ga0058697_108041742	3300005562	Agave	MRYRVTWNVEVDADDEAQARTAARQYLLDHEDEALSKVVALEEGSSPRDVPKVDAG*
Ga0081455_100235233	3300005937	Tabebuia Heterophylla Rhizosphere	MRYRVTWNVEVDADDEGRARTAARQFLMDNEDEALSKVVALEEGSSPADVPKVDAGGTPSI*
Ga0081538_100132373	3300005981	Tabebuia Heterophylla Rhizosphere	MRYRVTWNVEVEADDEGQARTAARQYLLENEDEALSKVVALEEGSSPPDVPKVDAGGTAEL*
Ga0081538_100174425	3300005981	Tabebuia Heterophylla Rhizosphere	MRYRVTWNVEVDADDEEQARTAARQYLLDHEDEALSKVVALEEGSAPRDVPKVDAG*
Ga0081538_100220044	3300005981	Tabebuia Heterophylla Rhizosphere	MRYRVTWNVEVDADDEGQARTAARQFLLQNEDEALSKVVALEDGSAPPDVPKVDAGGTAEI*
Ga0081538_100241255	3300005981	Tabebuia Heterophylla Rhizosphere	MRYRVTWNVEVDAGDEGQARTAARQYLLENEDEALSKVVALEEGASPPDVPKVDAGGTAEI*
Ga0081538_100351301	3300005981	Tabebuia Heterophylla Rhizosphere	WNVEVEADDEGQARTAARQYLLDNEDEALSKVVALEDGSSPPDVPKVDAGGTPEL*
Ga0081538_100383303	3300005981	Tabebuia Heterophylla Rhizosphere	MRYRVTWNVEVDANDEGQAHTAARLYLLENEDEALSKVVALEDGSSPPDVPKVDAGGTAEL*
Ga0081538_100484924	3300005981	Tabebuia Heterophylla Rhizosphere	AAMRYRVTWNVEVEADDEGQARTAARQYLLDNEDEALSKVVALEEGSSPADVPKVDAGGSPAI*
Ga0081538_100697482	3300005981	Tabebuia Heterophylla Rhizosphere	MRYRVTWNVEVDADDEGQARTAARQYLLENEDEALSKVVALEEGPSPPDVPKVDAGGTAEI*
Ga0081539_100460971	3300005985	Tabebuia Heterophylla Rhizosphere	MRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALDDGSAPPDVPKVDAGGTPAI*
Ga0081539_100475201	3300005985	Tabebuia Heterophylla Rhizosphere	PEATMRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEDGSAPPDVPKVDAGGTPTI*
Ga0081539_100623593	3300005985	Tabebuia Heterophylla Rhizosphere	MRYRVTWNVEVDADDEGQARTAARQYLLDNENEALSKVVALDEGSSPPDVPKVDAGGSPAI*
Ga0075417_100738202	3300006049	Populus Rhizosphere	MRYRVTWNVEVDADDEGQARTAARQYLLENEDEALSKVVGLDEGSSPPDVPKVDAGGSPAI*
Ga0075432_101020931	3300006058	Populus Rhizosphere	AAMRYRVTWNVEVDADDEGQARTAARQYLLENEDEALSKVVGLDEGSSPPDVPKVDAGGSPAI*
Ga0082029_13311061	3300006169	Termite Nest	MRYRVTWNVEVDADDEGQARTAARQFLMDNEDEALSKVVALEEGSSPADVPKVDAGGTPAI*
Ga0075429_1003553722	3300006880	Populus Rhizosphere	MRYRVTWNVEVEADDEGQARTAARQFLLDNEAEAFTKVVALEEGSSPPDVPKVDAG
Ga0111539_102035943	3300009094	Populus Rhizosphere	MRYRVTWNVEVNADDEGQARTAARQFLLENEDEALSKVVALEDGSSPPDVPKVDAGGSPEV*
Ga0075423_122397292	3300009162	Populus Rhizosphere	FPTTPEAVMRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEEGSSPPDVPKVDAGGSPEI*
Ga0126307_101355632	3300009789	Serpentine Soil	MRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALDDGSSPPDVPKVDAGGSPEI*
Ga0126307_105157242	3300009789	Serpentine Soil	VMRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEEGSSPPDVPKVDAGGSPEI*
Ga0126307_107992862	3300009789	Serpentine Soil	EAAMRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEDGSSPPDVPKVDAGGTPSI*
Ga0126313_100043499	3300009840	Serpentine Soil	RVTWNVEVDADDEGQARTAARQFLMDNEDEALSKVVALEEGSSPADVPKVDAGGTPSI*
Ga0126313_100492313	3300009840	Serpentine Soil	MRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEDGSAPPDVPKVDAGGTPTV*
Ga0126313_105132811	3300009840	Serpentine Soil	RVTWNVEVDADDEGQARTAARQFLMDNEDEALSKVVALEEGSAPADVPKVDAGGTPSI*
Ga0126313_107418241	3300009840	Serpentine Soil	TTTPEAAMRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEDGSAPPDVPKVDAGGTPTI*
Ga0126313_109474792	3300009840	Serpentine Soil	MRYRVTWNVEVDADDEGQARSAARQYLLDNEDEALSKVVALDEGSSPPDVPKVDAGGSPAI*
Ga0126305_103092291	3300010036	Serpentine Soil	AVMRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALDDGSSPPDVPKVDAGGSPEI*
Ga0126304_112634732	3300010037	Serpentine Soil	MRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALDDGSSPPDVPKVD
Ga0126304_112730282	3300010037	Serpentine Soil	VMRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEEGSPPPDVPKVDAGGSPEI*
Ga0126315_101836092	3300010038	Serpentine Soil	MRYRVTWNVEVDADDEGQARSAARQYLLDNEDEALSKVVALEEGSSPPDVPKVDAGGSPAI*
Ga0126315_101836093	3300010038	Serpentine Soil	VKVARCPVRTWNVEVDADDEGQARTAARQFLMENEDEALSKVVALEEGSSPADVPK
Ga0126315_102479072	3300010038	Serpentine Soil	VTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALDDGSSPPDVPKVDAGGSPEI*
Ga0126308_107710681	3300010040	Serpentine Soil	MTPEAAMRYRVTWNVEVEADDEGQARTAARQFLLENEDEALSKVVALEAGSSPADVPKVDAGGSPEI*
Ga0126312_100531931	3300010041	Serpentine Soil	YRVTWNVEVDADDEGQARTAARQYLLENEDEALSKVVALDEGSSPPDIPKVDAGGSPEI*
Ga0126312_102531712	3300010041	Serpentine Soil	MRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEDGSAPPDVPKVDAGGTPTI*
Ga0126312_107673611	3300010041	Serpentine Soil	PTTPEAAMRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEKGSSPPDVPKVDAGGSPEL*
Ga0126311_100390511	3300010045	Serpentine Soil	MRYRVTWNVEFDSDDEVQARTAALQFLLENEDEALSKVVALEDGSAPPDVPKVDAGGTPTV*
Ga0126321_11317401	3300010145	Soil	RPALPTTPEAAMRYRVTWNVEVEADDEGQARTAARQFLLDNEAEALSKVVALEEGSSPADVPKVDAGGSPTI*
Ga0126321_12653621	3300010145	Soil	RTPTTTPEAAMRYRVTWNVEVDADDEGQARTAARQFLMDNEDEALSKVVALEEGSTPADVPKVDAGGTPSI*
Ga0126321_13952782	3300010145	Soil	TTTMPEARMRYRVTWNVEVDADDEGQARTAARQFLLDNEDEALSKVVALEEGPSPADIPKVDAGGTPAI*
Ga0126306_100236555	3300010166	Serpentine Soil	MRYRVTWNVEVDADDEGQARTAARQFLMENEDEALSKVVALEEGSSPADVPKVDAGGTPSI*
Ga0058701_107060562	3300010395	Agave	MTPEAAMRYRVTWNVEVEADDEGQARTAARQFLLENEDEALSKVVALEEGSSPADVPKVDAGGSPTI*
Ga0120192_101071581	3300012021	Terrestrial	MRYRVTWNVEVEADDEAQAREAARQYLVDNEDEALSKVVALEEGSTPRDVPKVDAG*
Ga0157284_102234551	3300012893	Soil	TTPEAAMRYRVTWNVEVDADDEGKARTAARQYLLENEDEALSKVVALEEGSSPPDIPKVDAGGSPTI*
Ga0182000_100564732	3300014487	Soil	MRYRVTWNVEVEADDEGQARTAARQFLLANEAEAFSKVVALEEGSSPADVPKVDAGGSPTI*
Ga0182000_105080841	3300014487	Soil	TMRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALDDGSAPPDVPKVDAGGTPTI*
Ga0182001_100563612	3300014488	Soil	MRYRVTWNVEVDADDEGQARTAARQYLLENEDEALSKVVALEDGSSPPDVPKVDAGGSPEL*
Ga0120193_101051012	3300014965	Terrestrial	MRYRVTWNVEVDADDEEQARAAGRQYLLDHEDEALSKVVALEEGSTPRDVPKVDAG*
Ga0182005_11332072	3300015265	Rhizosphere	MRYRVTWNVEVEADDEGQARTAARQFLLDNEAEAFTKVVALEEGSSPADVPKVDAGGSPAI*
Ga0184610_11582542	3300017997	Groundwater Sediment	VTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEEGSSPPDVPKVDAGGSPEI
Ga0184604_100136221	3300018000	Groundwater Sediment	MRYRVTWNVEVDADDEGQARIAARQFLLENEDEALSKVVALDEGSSPPDVPKVDAGGSPE
Ga0184604_102652762	3300018000	Groundwater Sediment	MRYRVTWNVEVDADDEGQARTAARQFLMENEDEALSKVVALEDGSAPPDVPKVDAGGSPA
Ga0184605_100998702	3300018027	Groundwater Sediment	MRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALDEGSSPPDVPKVDAGGSPE
Ga0184620_100494792	3300018051	Groundwater Sediment	MRYRVTWNVEVDADDEGQARTAARQFLMDNEDEALSKVVALEDGSAPPDIPKVDAGGTPA
Ga0184620_102895222	3300018051	Groundwater Sediment	MPYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEEGSSPPDVPKVDAGGSPE
Ga0184619_101173241	3300018061	Groundwater Sediment	PTTPEAVMRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEDGSSPPDIPKVDAGGSPEI
Ga0184619_104785122	3300018061	Groundwater Sediment	MRYRVTWNVEVDADDEGQARTAARQFLMDNEDEALSKVVALEDGSAPPDVPKVDAGGTPA
Ga0184617_10087482	3300018066	Groundwater Sediment	MRYRVTWNVEVDADDEGQARTAARQFLMNNEDEALSKVVALEDGSAPPDVPKVDAGGSPT
Ga0184617_10104901	3300018066	Groundwater Sediment	VEADDAGQARTAARQFLLENEDEALSKVVALEDGSAPPDIPKVDAGGTPAI
Ga0184635_101199362	3300018072	Groundwater Sediment	MRYRVTWNVEVDADDEGQARTAARQYLLENEDEALSKVVALDEGSSPPDVPKVD
Ga0184624_100180093	3300018073	Groundwater Sediment	MRYRVTWNVEVDADDEGQARTAARQYLLENEDEALSKVVALDEGSSPPDVPKVDAGGSPA
Ga0184640_103062532	3300018074	Groundwater Sediment	MRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEEGSSPPDVPKVDAGGSPE
Ga0184632_104866312	3300018075	Groundwater Sediment	MRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEEGSSPPDIPKVDAGGTAE
Ga0184609_103311422	3300018076	Groundwater Sediment	MRYRVTWNVEVDAEDEGQARTAARQFLLENEDEALSKVVALEEGSSPPDVPKVDAGGSPE
Ga0184633_105052171	3300018077	Groundwater Sediment	MRYRVTWNVEVDADDEGQARMAARQFLLENEDEALSKVVALEEGSSPPDVPKVDAGGSPE
Ga0184612_100218332	3300018078	Groundwater Sediment	MRYRVTWNVEVDADDEGQARTAARQYLLENEEEALSKVVALEEGSSPPDIPKVDAGGTAE
Ga0184625_102258552	3300018081	Groundwater Sediment	MRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALDEGSSPPDVP
Ga0190272_129339702	3300018429	Soil	MRYRVTWNVEVEADDEGQARTAARQFLLENEEEALSKVVALEEGSSPPDVPKVDAGGSPE
Ga0190275_118071032	3300018432	Soil	MRYRVTWNVEVDADDEGQARTAARQFLMDNEAEALSKVVALEEGSSPADVPKVDAGGTPS
Ga0190269_118768681	3300018465	Soil	PTTPEAVMRYRVTWNVEVDADDEGQARTAARQYLLENEDEALSKVVALDEGSSPPDIPKVDAGGSPEI
Ga0190268_102787762	3300018466	Soil	MRYRVTWNVEVDADDEGQARTAARQYLLENEDEALSKVVALDEGSSPPDIPKVDAGGSPE
Ga0190268_113962361	3300018466	Soil	TTPEAAMRYRVTWNVEVDADDEGQARSAARQYLLDNEDEALSKVVALDEGSSPPDVPKVDAGGSPAI
Ga0190268_117591421	3300018466	Soil	TTPEAAMRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEDGSSPPDVPKVDAGGSPEI
Ga0190268_122681891	3300018466	Soil	DADDEGQARTAARQFLLENEDEALSKVVALEDGSAPPDVPKVDAGGTPTI
Ga0190270_101319072	3300018469	Soil	MRYRVTWNVEVDADDVGQARTAARQFLLENEDEALSKVVALEEGSSPPDIPKVDAGGTAE
Ga0190274_100187793	3300018476	Soil	MRYRVTWNVEVDADDEGQARTAARQFLMENEDEALSKVVALEEGSSPADVPKVDAGGTPS
Ga0190274_119631842	3300018476	Soil	PALPTMPEAMMRYRVTWNVEVDADDEGQARTAARQYLLENEDEALTKVVALEDGSSPPEIPKVDAGGTVEI
Ga0190264_101115022	3300019377	Soil	MRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEDGSSPPDVPKVDAGGSPE
Ga0190264_106646831	3300019377	Soil	WNVEVDADDEGQARTAARQFLLENEDEALSKVVALEEGSSPPDVPKVDAGGSPEI
Ga0190264_109610792	3300019377	Soil	MRYRVTWNVEGDADDEGQARTAARQFLLENEEEALSKVVALEDGSSPPDVPKVDAGGSPE
Ga0190264_120879502	3300019377	Soil	VEVDADDEGQARAAARQYLLDHEDEALSKVVALEDGSSPPDVPKVDAGGSASI
Ga0190267_100693952	3300019767	Soil	MRYRVTWNVEVEADDEGQARTAARQFLLENEDEALSKVVALEAGSSPADVPKVDAGGSPE
Ga0190267_104145201	3300019767	Soil	MRYRVTWNVEVDADDEGQARTAARQFLLENEEEALSKVVALEEGSSPPDVPKVDAGG
Ga0190267_109382251	3300019767	Soil	TWNVEVDADDEGQARTAARQFLLENEDEALSKVVALDEGSSPPDVPKVDAGGSAEI
Ga0190267_112321612	3300019767	Soil	NVEVDADDEGQARTAARQFLLENEDEALSKVVALDEGSSPPDIPKVDAGGSPEI
Ga0190267_116594322	3300019767	Soil	MRYRVTWNVEVEADDEGQARTAARQFLLDNEAEAFTKVVALEEGSSPADVPKVDAGGSPA
Ga0193741_11541221	3300019884	Soil	MRYRVTWNVEVEAGDEGQARTAARQFLLENEDEALSKVVALEEGSSPPDVPKVDAGGSP
Ga0193696_10675931	3300020016	Soil	NVEVDADDEGQARTAARQFLLENEDEALSKVVALDEGSSPPDVPKVDAGGSPEI
Ga0210381_100114592	3300021078	Groundwater Sediment	VTWNVEVDADDEGQARPAARQFLLENEDEALSKVVALEEGSSPPDVPKVDAGGSPEI
Ga0210381_100844321	3300021078	Groundwater Sediment	MRYRVTWNVEVDADDEGQARTAARQFLMDNEDEALSKVVALEDGSAPPDVPRVDAGGSPA
Ga0222623_100878991	3300022694	Groundwater Sediment	MRYRVTWNVEVDADDEGQARTAARQYLLENEDEALSKVVALEEGSSPPDIPKVDAGG
Ga0222622_100670173	3300022756	Groundwater Sediment	VTWNVEVDADDEGQARPAARQFLLENEDEALSKVVALEEGSSPPDVPTVDAGGSPEI
Ga0207668_103826671	3300025972	Switchgrass Rhizosphere	GGPAFPTTPEAVMRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEEGSSPPDVPKVDAGGSPEI
Ga0208710_1016932	3300026790	Soil	MRYRVTWNVEVDADDQGQARSAARQYLLDNEDEALSKVVALEEGSSPPDVPKVDAGGTPA
Ga0209795_100229891	3300027718	Agave	MRYRVTWNVEVDADDEAQARTAARQYLLDHEDEALSKVVALEEGSSPRDVPKVDAG
Ga0209461_100221342	3300027750	Agave	MRYRVTWNVEVEADDEGQARTAARQFLLENEDEALSKVVALEEGSSPADVPKVDAGGSPA
Ga0209461_100269682	3300027750	Agave	MRYRVTWNVEVDADDEGQARSAARQYLLDNEDEALSKVVALEEGSSPPDVPKVDAGG
Ga0209461_100539632	3300027750	Agave	RYRVTWNVEVDADDEGQARSAARQYLLDNEDEALSKVVALEEGSSPPDVPKVDAGGSPAI
Ga0209461_100676732	3300027750	Agave	MRYRVTWNVEVEADDEGQARTAARQFLLDNEDEALSKVVALEEGSSPADVPKVDAGGSPT
Ga0209574_100314552	3300027809	Agave	MRYRVTWNVEVEADDEGQARTAARQFLLDNEDEALSKVVALEEGSSPADVPKVDAGGTST
Ga0209574_100486712	3300027809	Agave	MRYRVTWNVEVDADDEGQARSAARQYLLDNEDEALSKVVALEEGSSPPDVPKVDAGGSPA
Ga0209814_100172844	3300027873	Populus Rhizosphere	MRYRVTWNVEVDADDEGQARTAARQYLLENEDEALSKVVGLDEGSSPPDVPKVDAGGSPA
Ga0307295_101357921	3300028708	Soil	EVDADDEGQARIAARQFLLENEDEALSKVVALDEGSSPPDVPKVDAGGSPEI
Ga0307322_100334172	3300028710	Soil	MRYRVTWNVEVDADDEGQARTAARQFLMDNEDEALSKVVALEDGSAPPDIPKVDAGGT
Ga0307285_102233762	3300028712	Soil	RVTWNVEVEADDEGQARTAARQFLLENEDEALSKVVALEEGSSPPDVPKVDAGGSPEI
Ga0307285_102413151	3300028712	Soil	MRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEEGSSPPDVPKVD
Ga0307311_101918751	3300028716	Soil	WNVEVDADDEGQARTAARQFLMDNEDEALSKVVALEDGSAPPDIPKVDAGGTPAI
Ga0307311_102394331	3300028716	Soil	MRYRVTWNVEVDADDEGQARTAARQFLMDNEDEALSKVVALEDGSAPPDVPRVDA
Ga0307307_100629302	3300028718	Soil	TWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEEGSSPPDVPKVDAGGSPEI
Ga0307307_101185002	3300028718	Soil	SLTPEAAMRYRVTWNVEVDADDEGQARTAARQFLMDNEDEALSKVVALEDGSAPPDIPKVDAGGTPAI
Ga0307301_101578232	3300028719	Soil	MRYRVTWNVEVDADDEGQARTAARQFLMDNEDEALSKVVALEDGSAPPDVPKVDAGGSPA
Ga0307301_103085421	3300028719	Soil	RSDGTTTPEAAMRYRVTWNVEVDADDEGQARTAARQFLMDNEDEALSKVVALEDGSAPPDIPKVDAGGTPAI
Ga0307319_100274392	3300028722	Soil	MRYRVTWNVEVEADDEGQARTAARQFLLENEDEAHSKVVALEEGSSPPDVPKVDAGGSPE
Ga0307319_101295852	3300028722	Soil	VTWNVEVDADDEGQARTAARQYLLENEDEALSKVVALEEGSSPPDIPKVDAGGTAEI
Ga0307319_101318742	3300028722	Soil	MRYRVTWNVEVEADDEGQARTAARQFLLENEDEALSKVVALEEGSSPPDVPKVDAGGSPE
Ga0307320_100131442	3300028771	Soil	MRYRVTWNVEVDADDEGQARTAARQYLLENEDEALSKVVALEEGSSPPDIPKVDAGGSPE
Ga0307320_100200911	3300028771	Soil	MRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEEGSSPPDIPKVDAGGT
Ga0307320_100469192	3300028771	Soil	MRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALDDGSSPPDIPKVDAGGSPE
Ga0307320_103995212	3300028771	Soil	MRYRVTWNVEVDADDEGQARSAARQYLLDNEDEALSKVVALDEGSSPPDVPKVDAGGSPA
Ga0307282_104875731	3300028784	Soil	AMRYRVTWNVEVDADDEGQARTAARQFLMDNEDEALSKVVALEDGSAPPDIPKVDAGGTPAI
Ga0307287_101341331	3300028796	Soil	TWNVEVDADDEGQARTAARQFLMDNEDEALSKVVALEDGSAPPDVPRVDAGGTPAI
Ga0307289_102480352	3300028875	Soil	MRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEEGSSPPDVPKVDAGG
Ga0307289_102968291	3300028875	Soil	PEAAMRYRVTWNVEVDADDEGQARTAARQFLMDNEDEALSKVVALEDGSAPPDVPRVDAGGSPAI
Ga0307278_1000027110	3300028878	Soil	MRYRVTWNVEVDADDEGQARTAARQFLLDNEAEALSKVVALEEGSSPPDVPKVDAGGSPE
Ga0307278_100228322	3300028878	Soil	MRYRVTWNVEVDADDEGQQRTAARQFLMDNEDEALSKVVALEDGSAPPDVPKVDAGGSPA
Ga0307278_102359691	3300028878	Soil	VMRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEEGSSPPDVPKVDAGGSPEI
Ga0307277_101532572	3300028881	Soil	MRYRVTWNVEVEADDEGQARTAARQFLLANEAEAFSKVVALEEGSSPADVPKVDAGGSPT
Ga0307277_101858131	3300028881	Soil	MRYRVTWNVEVDADDEGQARTAARQFLMENEDEALSKVVALEDGSAPPDVPKV
Ga0307308_105604872	3300028884	Soil	MRYRVTWNVEVDAEDEGQARVAARQFLMENEDEALSKVVALEDGSAPPDVPKVDAGGS
Ga0268259_101568601	3300030499	Agave	MRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEDGSAPPDVPKVDAGGTPS
Ga0268243_10586292	3300030510	Soil	MRYRVTWNVEVEADDEGQARTAARQFLLDNEDEALSKVVALEEGSSPADVPKVDAGGTPT
Ga0268242_10396642	3300030513	Soil	MRYRVTWNVEVDADDEGQARTAARQFLLENEAEALSKVVALEDGSSPPDVPKVDAGGSPE
Ga0268255_101326062	3300030516	Agave	PALPMTPEAAMRYRVTWNVEVEADDEGQARTAARQFLLENEDEALSKVVALEAGSSPADVPKVDAGGSPEI
Ga0308201_103606012	3300031091	Soil	NVEVDADDEGQARTAARQFLLENEDEALSKVVALEEGSSPPDVPKVDAGGSPEI
Ga0307408_1000510203	3300031548	Rhizosphere	MRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEKGSSPPDVPKVDAGGSPE
Ga0307408_1001200292	3300031548	Rhizosphere	MRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALDDGSSPPNVPKVDAGGSPE
Ga0307405_100386835	3300031731	Rhizosphere	MRYRVTWNVEVEADDEAAARAAARQYLLDNEDEALSKVVALEEGSTPRDVPKVDAG
Ga0307405_115315132	3300031731	Rhizosphere	MRYRVTWNVEVDADDEGQARSAARQYLLDNEDEALSKVVALEEGSSPPDV
Ga0307413_115832781	3300031824	Rhizosphere	MRYRVTWNVEVDADDEGQARTAARQFLMDNEDEALSKVVALEEGSAPADVPKVDAGGTPS
Ga0307410_100300275	3300031852	Rhizosphere	MRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEDGSAPPDVPKVDAGGTPT
Ga0307406_100060954	3300031901	Rhizosphere	MRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALDDGSSPPDVPKVDAGGSPE
Ga0307406_102413632	3300031901	Rhizosphere	MRYRVTWNVEVDADDEGQARTAARQFLMDNEDEALSKVVALEEGSSPADVPKVDAGGTPS
Ga0307407_101840573	3300031903	Rhizosphere	MRYRVTWNVEVDADDEGQARTVARQFLLENEDEALSKVVALEDGSSPPDVPKVDAGGTPS
Ga0307409_1001369373	3300031995	Rhizosphere	MRYRVTWNVEVDADDEGQARTAARQFLMDNEDEALSKVVALEEGSAPADIPKVDAGGTPS
Ga0307409_1004351181	3300031995	Rhizosphere	PDPALPTTPEAAMRYRVTWNVEVDADDEGQARSAARQYLLENEDEALSKVVALEEGSSPPDVPKVDAGGSPAI
Ga0307411_101042383	3300032005	Rhizosphere	MRYRVTWNVEVDADDEGQARTAARQFLMDNEDEALSKVVALEEGSAPADIPKVDA
Ga0307411_107210781	3300032005	Rhizosphere	MRYRVTWNVEVDADDEGQARSAARQYLLDNEDEALSKVVALDEGSSPPDVPKV
Ga0307411_115430782	3300032005	Rhizosphere	TWNVEVEADDEAAARAAARQYLLDNEDEALSKVVALEEGSTPRDVPKVDAG
Ga0307411_116303392	3300032005	Rhizosphere	AMRYRVTWNVEVDADDEGQARTAARQFLLENEDEALSKVVALEDGSAPPDVPKVDAGGTPTV
Ga0326721_104313602	3300032080	Soil	MRYRVTWNVEVEADDEGQARTAARQFLLENEDEALSKVVALEDGSSPPDVPKVDAGGSPE
Ga0307415_1001027352	3300032126	Rhizosphere	MRYRVTWNVEVEADDEGQARTAARQFLLDNEDEALSKVVALEEGSSPADVPRVDAGGSPA
Ga0268251_104885492	3300032159	Agave	MRYRVTWNVEVDADDEGQARTAAREYLLNNEDEALSKVVALEEGSSPPDVPKVDAGGSPA
Ga0334913_124956_266_433	3300034172	Sub-Biocrust Soil	MKYRVTWTVEVDADDEAQARTAARQYLLDNEDEALAKIVAVEDGSSPRDVPHVEA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F036413

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences