NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F036332

Metagenome / Metatranscriptome Family F036332

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F036332
Family Type Metagenome / Metatranscriptome
Number of Sequences 170
Average Sequence Length 47 residues
Representative Sequence MNAGMEFKLSHLQSMLLFALLISIAFGFLSRRRPIDRVKYIVWSL
Number of Associated Samples 120
Number of Associated Scaffolds 170

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 95.33 %
% of genes near scaffold ends (potentially truncated) 60.00 %
% of genes from short scaffolds (< 2000 bps) 51.76 %
Associated GOLD sequencing projects 111
AlphaFold2 3D model prediction Yes
3D model pTM-score0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (62.941 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(36.471 % of family members)
Environment Ontology (ENVO) Unclassified
(37.059 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(45.882 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 45.21%    β-sheet: 0.00%    Coil/Unstructured: 54.79%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 170 Family Scaffolds
PF00557Peptidase_M24 34.12
PF02594DUF167 4.12
PF01168Ala_racemase_N 3.53
PF00724Oxidored_FMN 1.76
PF13177DNA_pol3_delta2 1.18
PF02223Thymidylate_kin 0.59
PF01381HTH_3 0.59
PF13561adh_short_C2 0.59
PF17209Hfq 0.59
PF030614HBT 0.59

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 170 Family Scaffolds
COG1872Uncharacterized conserved protein YggU, UPF0235/DUF167 familyFunction unknown [S] 4.12
COG0042tRNA-dihydrouridine synthaseTranslation, ribosomal structure and biogenesis [J] 1.76
COG19022,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) familyEnergy production and conversion [C] 1.76
COG0125Thymidylate kinaseNucleotide transport and metabolism [F] 0.59

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms62.94 %
UnclassifiedrootN/A37.06 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001661|JGI12053J15887_10593995All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300002914|JGI25617J43924_10296268All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300004092|Ga0062389_104971544All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300005332|Ga0066388_104812427All Organisms → cellular organisms → Bacteria → Acidobacteria687Open in IMG/M
3300005436|Ga0070713_101642908All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae624Open in IMG/M
3300005468|Ga0070707_100950472All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae824Open in IMG/M
3300005555|Ga0066692_10316992All Organisms → cellular organisms → Bacteria989Open in IMG/M
3300005559|Ga0066700_10118700All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1757Open in IMG/M
3300005560|Ga0066670_10114318All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1531Open in IMG/M
3300005560|Ga0066670_10710551All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300006041|Ga0075023_100424114All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300006052|Ga0075029_100728191All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae671Open in IMG/M
3300006086|Ga0075019_10036910All Organisms → cellular organisms → Bacteria2751Open in IMG/M
3300006176|Ga0070765_100086743All Organisms → cellular organisms → Bacteria2670Open in IMG/M
3300006791|Ga0066653_10000690All Organisms → cellular organisms → Bacteria9386Open in IMG/M
3300006804|Ga0079221_10879081All Organisms → cellular organisms → Bacteria655Open in IMG/M
3300006914|Ga0075436_100020950All Organisms → cellular organisms → Bacteria → Proteobacteria4484Open in IMG/M
3300007258|Ga0099793_10333132All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300007265|Ga0099794_10039066All Organisms → cellular organisms → Bacteria2251Open in IMG/M
3300009088|Ga0099830_10798861All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae778Open in IMG/M
3300009088|Ga0099830_11035213All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300009089|Ga0099828_12034190All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300009090|Ga0099827_11432738All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300009090|Ga0099827_11476488All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300009520|Ga0116214_1075456All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1232Open in IMG/M
3300010359|Ga0126376_10054040All Organisms → cellular organisms → Bacteria2856Open in IMG/M
3300010359|Ga0126376_11126613All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae795Open in IMG/M
3300010401|Ga0134121_10779406All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae916Open in IMG/M
3300010876|Ga0126361_11241126All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1248Open in IMG/M
3300012096|Ga0137389_10733637All Organisms → cellular organisms → Bacteria → Acidobacteria849Open in IMG/M
3300012096|Ga0137389_10787513All Organisms → cellular organisms → Bacteria817Open in IMG/M
3300012189|Ga0137388_11166733All Organisms → cellular organisms → Bacteria → Acidobacteria707Open in IMG/M
3300012202|Ga0137363_10004032All Organisms → cellular organisms → Bacteria8981Open in IMG/M
3300012203|Ga0137399_10449770All Organisms → cellular organisms → Bacteria1077Open in IMG/M
3300012205|Ga0137362_11161502All Organisms → cellular organisms → Bacteria655Open in IMG/M
3300012210|Ga0137378_10355491All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1361Open in IMG/M
3300012361|Ga0137360_10845680All Organisms → cellular organisms → Bacteria → Acidobacteria788Open in IMG/M
3300012362|Ga0137361_10052703All Organisms → cellular organisms → Bacteria3364Open in IMG/M
3300012363|Ga0137390_10885913All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae848Open in IMG/M
3300012363|Ga0137390_11637821All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300012398|Ga0134051_1254734All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300012683|Ga0137398_10372289All Organisms → cellular organisms → Bacteria970Open in IMG/M
3300012917|Ga0137395_10468508All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae906Open in IMG/M
3300012925|Ga0137419_10258654All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1315Open in IMG/M
3300012925|Ga0137419_11248784All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300012925|Ga0137419_11776657All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300012927|Ga0137416_12123891All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300012930|Ga0137407_10307981All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1450Open in IMG/M
3300012931|Ga0153915_12101206All Organisms → cellular organisms → Bacteria → Acidobacteria661Open in IMG/M
3300012944|Ga0137410_10870891All Organisms → cellular organisms → Bacteria → Acidobacteria760Open in IMG/M
3300012944|Ga0137410_11594953All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300012971|Ga0126369_11955210All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300015051|Ga0137414_1025782All Organisms → cellular organisms → Bacteria → Acidobacteria796Open in IMG/M
3300015051|Ga0137414_1212415All Organisms → cellular organisms → Bacteria → Acidobacteria798Open in IMG/M
3300015054|Ga0137420_1423656All Organisms → cellular organisms → Bacteria1173Open in IMG/M
3300015054|Ga0137420_1474966All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4078Open in IMG/M
3300015242|Ga0137412_10147502All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1897Open in IMG/M
3300015245|Ga0137409_10820130All Organisms → cellular organisms → Bacteria → Acidobacteria765Open in IMG/M
3300017955|Ga0187817_10455585All Organisms → cellular organisms → Bacteria → Acidobacteria816Open in IMG/M
3300018012|Ga0187810_10152520All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae928Open in IMG/M
3300018468|Ga0066662_10618710All Organisms → cellular organisms → Bacteria1017Open in IMG/M
3300019789|Ga0137408_1447356All Organisms → cellular organisms → Bacteria2500Open in IMG/M
3300020579|Ga0210407_10008352All Organisms → cellular organisms → Bacteria7768Open in IMG/M
3300020579|Ga0210407_11243477All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300020583|Ga0210401_10001142All Organisms → cellular organisms → Bacteria31183Open in IMG/M
3300021086|Ga0179596_10599354All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300021088|Ga0210404_10322827All Organisms → cellular organisms → Bacteria → Acidobacteria853Open in IMG/M
3300021088|Ga0210404_10817991All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300021170|Ga0210400_10374454All Organisms → cellular organisms → Bacteria → Acidobacteria1173Open in IMG/M
3300021171|Ga0210405_10324998All Organisms → cellular organisms → Bacteria → Acidobacteria1215Open in IMG/M
3300021181|Ga0210388_11293629All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300021405|Ga0210387_11470358All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300021405|Ga0210387_11553210All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300021407|Ga0210383_10138124All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2068Open in IMG/M
3300021478|Ga0210402_10070825All Organisms → cellular organisms → Bacteria3085Open in IMG/M
3300021478|Ga0210402_11183867All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300021559|Ga0210409_10156942All Organisms → cellular organisms → Bacteria2083Open in IMG/M
3300022726|Ga0242654_10230152All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300024227|Ga0228598_1049769All Organisms → cellular organisms → Bacteria → Acidobacteria831Open in IMG/M
3300024330|Ga0137417_1002007All Organisms → cellular organisms → Bacteria2088Open in IMG/M
3300024330|Ga0137417_1228786All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300026291|Ga0209890_10228699All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300026328|Ga0209802_1306263All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300026538|Ga0209056_10610403All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300026555|Ga0179593_1107514All Organisms → cellular organisms → Bacteria2508Open in IMG/M
3300027334|Ga0209529_1036782All Organisms → cellular organisms → Bacteria836Open in IMG/M
3300027587|Ga0209220_1018729All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1846Open in IMG/M
3300027846|Ga0209180_10598876All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300027862|Ga0209701_10015058All Organisms → cellular organisms → Bacteria5069Open in IMG/M
3300027875|Ga0209283_10441453All Organisms → cellular organisms → Bacteria → Acidobacteria844Open in IMG/M
3300027903|Ga0209488_10636465All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae770Open in IMG/M
3300028673|Ga0257175_1124101All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300028780|Ga0302225_10528134All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300029636|Ga0222749_10322945All Organisms → cellular organisms → Bacteria → Acidobacteria803Open in IMG/M
3300031018|Ga0265773_1013449All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300031057|Ga0170834_100390137All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300031240|Ga0265320_10476976All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300031525|Ga0302326_12874575All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300031573|Ga0310915_10856922All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300031720|Ga0307469_11783697All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300031754|Ga0307475_10204922All Organisms → cellular organisms → Bacteria → Acidobacteria1577Open in IMG/M
3300031754|Ga0307475_10890911All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae703Open in IMG/M
3300031962|Ga0307479_10037224All Organisms → cellular organisms → Bacteria4661Open in IMG/M
3300031962|Ga0307479_10204223All Organisms → cellular organisms → Bacteria → Acidobacteria1946Open in IMG/M
3300032160|Ga0311301_12652600All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300032180|Ga0307471_100840355All Organisms → cellular organisms → Bacteria1085Open in IMG/M
3300032205|Ga0307472_100180281All Organisms → cellular organisms → Bacteria1582Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil36.47%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil17.06%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.06%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil7.06%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.53%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.94%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.94%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.35%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.76%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.76%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.76%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.76%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere1.76%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.18%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.18%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.59%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.59%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.59%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.59%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.59%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.59%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.59%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.59%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.59%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.59%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.59%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.59%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006086Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010876Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012386Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012398Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014657Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaGEnvironmentalOpen in IMG/M
3300015051Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017924Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300018012Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021046Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depthEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024186Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29EnvironmentalOpen in IMG/M
3300024227Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4Host-AssociatedOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300026291Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300027334Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027535Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027587Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028023Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5Host-AssociatedOpen in IMG/M
3300028673Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-BEnvironmentalOpen in IMG/M
3300028780Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031018Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031240Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaGHost-AssociatedOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033983Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fractionEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12635J15846_1036402313300001593Forest SoilMNAHFTHFQAMLLFALVISVAFGFLSRRRPLDRVKYM
JGI12053J15887_1059399523300001661Forest SoilMNAGMGFHLSHFQSMLLFALLISIAFGFLSRRRPIDRVKYIVWSLFLFLLIGV
JGI25617J43924_1029626823300002914Grasslands SoilMNAGMGFKLNHLQSMLLFAVLISVAFGFLSRRRPIDRVKYMVWSLFLFLLIGVGIGW
JGIcombinedJ51221_1043993723300003505Forest SoilVIVAIAFNLTHFQSMTLFALLISVAFGFLSRRRANERVKYIIWS
Ga0062389_10497154413300004092Bog Forest SoilMATIGFSLSHFQAMTLFALLISIAFGFLSRRRTSDRVKYIIWSLFLF
Ga0062595_10050786413300004479SoilVIAAIGFELTHFQSMTLFALLISIAFGFLSRRRTSDRVKYIM
Ga0066388_10481242723300005332Tropical Forest SoilMIAGAAWKLSHLQSMVLFALVISVAFGFLARRRSKERLKYIVWTLLLFLLVGVGIGWAMY
Ga0070713_10164290813300005436Corn, Switchgrass And Miscanthus RhizosphereVTPVKFHLSHFQAMLLFALVVSIAFGFLSRRRPLDRVKYIVWSLLLFLL
Ga0070707_10095047213300005468Corn, Switchgrass And Miscanthus RhizosphereMSAGLAFKISHLQAMLLFALVISVAFGFLARRRPVDRVKYIVWSLF
Ga0066701_1061714613300005552SoilMNVGPGFKLTHLQAMLLFALAISIAFGFLSRRKPIE
Ga0066692_1031699213300005555SoilMNTEMGIKLGHLQSMLLFALLISIAFGFLSRRRPIDRVKYIVWSLFLFLL
Ga0066692_1086942023300005555SoilMIAETGFKLNHLQSMLLFALVISIAFGFLSRRKPIDRVKYIVWSL
Ga0066700_1011870033300005559SoilMNAGMGFKLSHLQSMLLFALLISIAFGFLSRRQPIERAKYIVWSLLLFLLIGV
Ga0066700_1075014013300005559SoilMNAGMEFKLNHLQSMLLFASLISIAFGFLSRRQPIERVKYIV
Ga0066670_1011431813300005560SoilMNAGMGFKLRHLQSMLLFALLISIAFGFLSRRQPIERVKYIVWSLLL
Ga0066670_1071055123300005560SoilMNFGMGFKLSHLQSMLLFALLISIAFGFLSRRRPIDRAKYIVWSLFLFLLIGVGI
Ga0070762_1092884813300005602SoilVIATIGFTLTHFQAMTLFALLISIAFGFLSRRRTSERIKYILWS
Ga0075023_10042411423300006041WatershedsMISAAIVMKLSHLQAMLIFAVVISVAFGTLGRRRTADRVKYILWTLFLFIVIGVG
Ga0075029_10072819113300006052WatershedsMMAETLAIKLSHLQAMLLFALVISVAFGTLGRRRTSDRLKYVLWTLF
Ga0075019_1003691013300006086WatershedsMSGGFGFKLSHLQAMLLFAVVISIAFGFLGKRRPVDRVKYIVWALFLF
Ga0070765_10008674353300006176SoilMIFNLSHFQSMILFALMVSIAFGFLSRRPMRERAKYIGWSFLLFVL
Ga0070765_10100168213300006176SoilVILAIAFTLSHFQSMTLFALLISVAFGFLSRRRTNERV
Ga0066653_10000690133300006791SoilMNAGMGFKLSHLQSMLLFALLISIAFGFLSRRQPIERAKYIVWSLLLFLLIGVGIGWAMYP*
Ga0079221_1087908123300006804Agricultural SoilMIAAIGVKLSHIQAMVLFALVISVAFGFLGRRKPIDRMKYIIWSLILFLLIGVGVVPQ
Ga0075436_10002095063300006914Populus RhizosphereMNAGMGFKLSHLQSMLLFALLISIAFGFLSRRQPIERVKYIVWSLLLFLLIGVGIGRAMYPFSR*
Ga0099793_1033313223300007258Vadose Zone SoilVSAAIAFNLSHLQAMLLFALVISIAFGFLSRRQPIERVKYIVWSLFLFLLIGVG
Ga0099794_1003906613300007265Vadose Zone SoilMNAEMGIKLGHLQSMLLFALLISIAFGFLSRRRPIDRVKYIVCSLFLFLLIGVGIG
Ga0099830_1079886113300009088Vadose Zone SoilMNVGPGFKLTHLQAMLLFALAISIAFGFLSRRKPIERVKYIVWSLFLFLLIGVG
Ga0099830_1100178133300009088Vadose Zone SoilMNTGIGFKLSHLQAMLLFALLISIAFGFLSRRRPIDRVK
Ga0099830_1103521313300009088Vadose Zone SoilMKFHLSHLQAMLLFALMISIAFGFLSRRRPLDRIRYIAWSLLLFL
Ga0099828_1203419013300009089Vadose Zone SoilMNAGFGFKLSHLQSMLLFALVISVAFGFLSRRQPVDRVKYIVWSLFLFLLVGVGI
Ga0099827_1002674673300009090Vadose Zone SoilMSVRLNHFQAMLFFALVISVAFGFLSRRRPLDRVKYM
Ga0099827_1143273823300009090Vadose Zone SoilMNAGFGFKLSHLQSMLLFALVISVAFGFLSRRRPVDRVKYIVWSLFLFLLVGVGI
Ga0099827_1147648813300009090Vadose Zone SoilMNARMGFKLDHLQSMLLFALLISIAFGFLSRRRPMDRVKYIVWSLFLF
Ga0116214_107545633300009520Peatlands SoilMNAAMVFKIDHLQSMLLFAALISIAFGFLSRRRPMDRVKYIVWSLILFLLI
Ga0116216_1061023113300009698Peatlands SoilMNAAMVFKIDHLQSMLLFAALISIAFGFLSRRRPMDRVKYIVW
Ga0134067_1005348733300010321Grasslands SoilMNAGMGFKLRHLQSMLLFALLISIAFGFLSRRQPI
Ga0134064_1004759113300010325Grasslands SoilMNAGMGFKLSHLQSMLLFALLISIAFGFLSRRQPIERAKY
Ga0134065_1012077113300010326Grasslands SoilMNFGMGFKLSHLQSMLLFALLISIAFGFLSRRRPIDRAKYIV
Ga0126376_1005404013300010359Tropical Forest SoilMIAGAAWTLSHLQSMVLFALVISIAFGFLARRQSKERLKYIVWTLLLFLLV
Ga0126376_1112661333300010359Tropical Forest SoilMIAGAAWKLSHLQSMVLFALVISVAFGFLARRQSKERLKYIVWTLLLFLLVGVGIGW
Ga0126372_1169538113300010360Tropical Forest SoilMIAGAAWKLSHLQSMILFALVISVAFGFLARRRSKERLKYIVW
Ga0126383_1285255523300010398Tropical Forest SoilMIAGAAWKLSHLQSMVLFALVISIAFGFLARRRSKERLK
Ga0134121_1077940613300010401Terrestrial SoilMIFNLSHFQAMILFALMVSVAFGFLSRRPMRERAKYIGWSFLLF
Ga0126361_1124112633300010876Boreal Forest SoilVIAAIAFNLSHFQAMTLFALLISIAFGFLSRRRTSERVKYIIWSLFLFLLIGV
Ga0137391_1143115113300011270Vadose Zone SoilMKFHLSHSQAMLLFAMLISIAFGFLSRRRPLDRVKYIAWSL
Ga0137393_1171380013300011271Vadose Zone SoilMSAGMEFKLSHLQSMLLFALLISIAFGFLSRRRPIDRVKYIVWS
Ga0137389_1003144373300012096Vadose Zone SoilMKFHLSHLQGMLLFALLISIAFGFLSRRRPLDRVKYIAWSLL
Ga0137389_1073363733300012096Vadose Zone SoilMNAGMEFKLSHLQSMLLFALLISIAFGFLSRRRPIERVKYIVWSLFLFLLIGVGIGW
Ga0137389_1078751333300012096Vadose Zone SoilMNAEMGIKLGHLQSMLLFALLISIAFGFLSRRRPIDRVKYIVWSLFLFLLIGVRIGWAMYRFSH*
Ga0137388_1116673313300012189Vadose Zone SoilMNAEMGFKLGHLQSMLLFALLISIAFGFLSRRRPIDRVKYIVWSLFLFLLI
Ga0137388_1128034433300012189Vadose Zone SoilVSATIAFNLSHLQAMLLFALVISIAFGFLSRRKPVDRVKYI
Ga0137363_1000403213300012202Vadose Zone SoilMNFGIGFKLSHLQSMLLFALLISIAFGFLSRRRPIDRVKYIVWSLF
Ga0137399_1044977013300012203Vadose Zone SoilVSAAVVLGLSHLQAMLLFALVISIAFGFLSRRQPIERIKYIMWSLFLFLLIGV
Ga0137362_1048539633300012205Vadose Zone SoilMNAGMGFKLSHLQSMVLFALLISVAFGFLSRRRPIDRV
Ga0137362_1078234613300012205Vadose Zone SoilVSAAIGFSLSHLQAMLLFALVISIAFGFLSRRQPIERVKYIVW
Ga0137362_1116150213300012205Vadose Zone SoilMNVGPGFKLTHLQAMLLFALAISIAFGFLSRRKPIERVKYIVWSLFLFLLIG
Ga0137378_1035549113300012210Vadose Zone SoilMNGGMGFHLSHFQSLLLFALLISVAFGFLSRRRPIDRVKYIVWSLFLFLLIGVGIG
Ga0137360_1037425213300012361Vadose Zone SoilMNAGMEFKLSHLQSMLLFALLISIAFGFLSRRRPIDRVKYIVWSL
Ga0137360_1084568013300012361Vadose Zone SoilMNAGMGFKLSHLQAVLLFALLISIAFGFLSRRRPIERVKYIVWSLF
Ga0137361_1005270313300012362Vadose Zone SoilVSAAIGFSLSHLQAMLLFALVISIAFGFLSRRQPIERVKYIVWSLFL
Ga0137361_1046204013300012362Vadose Zone SoilVSAAIGFSLSHLQAMLLFALVISIAFGFLSRRQPVE
Ga0137390_1088591313300012363Vadose Zone SoilMNAGMEFKLSHLQSMLLFALLISIAFGFLSRRRPIDRVKYIVWSLFLFLL
Ga0137390_1163782113300012363Vadose Zone SoilMNAGMGFNLSHFQSMLLFALLISIAFGFLSRRRPIDRVKYIVWSLFLFL
Ga0134046_124435313300012386Grasslands SoilMNAGMGFKLSHLQSMLLFALLISIAFGFLSRRQPIERAKYIV
Ga0134051_125473423300012398Grasslands SoilMNAGMGFKLSHLQSMLLFALLISIAFGFLSRRQPIERAKYIVWSLLLFLLIGVGIGW
Ga0137398_1037228913300012683Vadose Zone SoilMKFHLSHLQAMLLFALLISIAFGFLSRRRPMDRVKYIAWSLLLFLLFG
Ga0137395_1046850833300012917Vadose Zone SoilMNAGMEFKLSHLQSMLLFALLTSIAFGFLSRRRPIDRVKYIVWSLFLFLLIGVG
Ga0137419_10003627123300012925Vadose Zone SoilMNTGMGFKLSHLQSMLLFALLISIAFGFLSRRRPIDRVK
Ga0137419_1025865413300012925Vadose Zone SoilVSAAIVLNLSHLQAMLLFALVISITFGFLSRRKPVDRVKYIVWSLFLFLLIG
Ga0137419_1124878423300012925Vadose Zone SoilVSAAIVFNLSHLQAMLLFALVISIAFGFLSRRKPVERVKYIVWSLFLFLLIGVSI
Ga0137419_1174979023300012925Vadose Zone SoilMKFHLSHLQAMLLFALMISIAFGFLSRRRPLERVKYIV
Ga0137419_1177665713300012925Vadose Zone SoilMKFHLSHLQAMLLFALLISTAFGFLSRRRPMDRVKYIAWSLLL
Ga0137416_1034174313300012927Vadose Zone SoilMNASIGFTLSHLQSMLLFALLISIAFGFLSRRRPIDRVKYIVWS
Ga0137416_1053963413300012927Vadose Zone SoilVSAAIGFSLSHLQAMLLFALVISIAFGFLSRRQPVERVKYIV
Ga0137416_1116684533300012927Vadose Zone SoilVSAAIGFSLSHLQAMLLFALVISIAFGFLSRRQPVERVK
Ga0137416_1212389113300012927Vadose Zone SoilMNFGIGFKLSHLQSMLLFALLISIAFGFLSRRRPIDRVKYIVWSLFLF
Ga0137407_1030798113300012930Vadose Zone SoilMSGGMGFKLSHLQSLLLFAVLISIAFGFLSRRRPIDRLKYIVWSLFL
Ga0153915_1210120633300012931Freshwater WetlandsMTLTHLHGMLLFALIVSVAFGFLSRRRPMDRVKYIVWSLFLFLLVGIGI
Ga0137410_1087089113300012944Vadose Zone SoilMTLHFSHFQSMLLFALAISVAFGFLSRRPALERLKYVGWSLLMFLLIGVGI
Ga0137410_1159495313300012944Vadose Zone SoilMNASIGFTLSHLQSMLLFALLISIAFGFLSRRRPIDRVKYIVWSLFLFL
Ga0126369_1195521013300012971Tropical Forest SoilMIAGAIWKLSHLQSMVVFALVISVAFGFLARRQSKERLKYIVWTLLLFL
Ga0181522_1072114913300014657BogMIFNLSHFQAMVLFALMVSIAFGFLSRRPMRERAKYIGWS
Ga0137414_102578213300015051Vadose Zone SoilMGFKLSHLQSLLLFAVLISIAFGFLSRRRPIDRLKYIVWSLFLFLLIGVGI
Ga0137414_121241533300015051Vadose Zone SoilMGFKLSHLQSLLLFAVLISIAFGFLSRRRPIDRLKYIVWSLFLFLLIGVG
Ga0137420_130900813300015054Vadose Zone SoilMNAGMEFKLSHLQSMLLFALLISIAFGFLSRRRPIDRVKYIV
Ga0137420_142365613300015054Vadose Zone SoilMNAGMEFKLSHLQSMLLFALLISIAFGFLSRRRPIDRVKYIVWSLFLFLLIGVGIGWAMYPF
Ga0137420_1474966103300015054Vadose Zone SoilMNAEMGIKLGHLQSMLLFALLISIAFGFLSRRRPIDRVKYIVWSLFLFS*
Ga0137412_1014750213300015242Vadose Zone SoilMGFKLSHLQSLLLFAVLISIAFGFLSRRRPIDRLKYIVWSLFLFLLIGVGIGW
Ga0137409_1082013033300015245Vadose Zone SoilMTLHFSHFQSMLLFALAISVAFGFLSRRPALERLKYVGWSLLMFLLIGVGIG
Ga0187820_100568413300017924Freshwater SedimentVIAAIEFHLTHFQSMTLFALLISIAFGFLSRRRMSERVKYIL
Ga0187817_1045558513300017955Freshwater SedimentMNAAVVFKLGHLQSMLLFAILISVAFGFLSRRRPVDRVKYIVWSLILFLLIGV
Ga0187810_1015252013300018012Freshwater SedimentMIGAAGFKLSHLQAMLLFALIISIAFGFLSRRKPIDRVKYILWSLFLFLLV
Ga0066662_1061871013300018468Grasslands SoilMNAGMGFKLSHLQSMLLFALLISIAFGFLSRRQPIERAKYIVWSLLLFLLIGVVIGWAMY
Ga0137408_103187233300019789Vadose Zone SoilMNTEMGIKLGHLQSMLLFALLISIAFGFLSRRRPI
Ga0137408_144735613300019789Vadose Zone SoilVSAAIGFSLSHLQAMLLFALVISIAFGFLSRRQPVERVKYIVWSLFLFL
Ga0210407_10008352113300020579SoilMKFHLSHLQAMLLFALLVSVAFGFLSRRRPLDRAKYIAWSLLLFLLFGI
Ga0210407_1030596513300020579SoilMNLEMGFKISHLQSMLLFAVLISIAFGFLGRRRPIE
Ga0210407_1124347713300020579SoilVNATLGFHLSHLQAMVLFALIISVAFGFLGRRRPLDRVRYIAWSLFLFL
Ga0210399_1083080133300020581SoilMTLQLSHLQAMLLFALAISVAFGFLSRRPAMERVK
Ga0210401_1000114213300020583SoilMIAAIAFKLSHLQAMLLFSLVISAAFGFLSRRQPVERVKYIAWSLFFFFFLGVGH
Ga0210401_1051886913300020583SoilVIATIGFSLSHFQAMTLFALLISIAFGFLSRRRASDRVKY
Ga0215015_1014805113300021046SoilMSAVIALKLSHLQAMLLFALVISISFGFLSRRRPIDRVK
Ga0179596_1059935413300021086Vadose Zone SoilMNAETGFKLSHLQSMLLFALVISVAFGFLSRRRPIDRVKYIVWSLVLFILIGVG
Ga0210404_1021492333300021088SoilMNAGMGFKLSHLQAMLLFALLISIAFGFLSRRRPIERVKY
Ga0210404_1032282713300021088SoilMNAEMGFKLGHLQSMLLFALLISIAFGFLSRRRPIDRVKYIVWSLFLFLLIGVGIGWAMY
Ga0210404_1081799123300021088SoilMIAAIAFKLSHLQAMLLFSLVISVAFGFLSRRQPVERVKYIAWSLFFFLLIGVGIGWAMYPF
Ga0210406_1127020923300021168SoilMGWKVSHFQAMLLFAVAISLAFGFLSRRQPLERVKYI
Ga0210400_1037445433300021170SoilMNFHLSHLQAMLLFALLISIAFGFLSRRRPLDRVKYIAWSLLLFL
Ga0210405_1032499833300021171SoilMNAGMGFKLSHLQAMLLFALLISIAFGFLSRRRPIERVKYIAWSLFLFLLFGVAI
Ga0210388_1025993933300021181SoilMIAAIAFKLSHLQAMLLFSLVISIAFGFLSRRQPAERV
Ga0210388_1129362913300021181SoilVIAALGMTFSHFQAMTLFALLISIAFGFLSRRRTNERVKYIIWSLFLFLLIG
Ga0210387_1147035813300021405SoilVSDSSGIHLSHLQALLFFALIISVAFGFLSRRRWPDRIKYILWSFMLF
Ga0210387_1155321013300021405SoilMTAGIHLSHFPAMLIFALIISVSFGFLSRRRPSDRIKYILWSLFLFLFIGI
Ga0210383_1013812443300021407SoilMIFNLSHFQAMVLFALMVSIAFGFLSRRPMRERAKYIGWSFLLFVVIGIG
Ga0210402_1007082563300021478SoilVIAAIVLKLSHLQSMLLFASIISIGFGFLSRRNPVERVKYIAWSLLLFLLI
Ga0210402_1048247113300021478SoilVTSAADFHLSHFQAMLLFALLISIAFGFLSRRRTSERVKYI
Ga0210402_1118386713300021478SoilMKFHLSHLQAMLLFALLISIAFGFLSRRRPLERVKYIAWSLLLFL
Ga0210402_1146336413300021478SoilVIAAIGFELTHFQSMTLFALLISIAFGILSRRRTSDRVK
Ga0210402_1149836923300021478SoilMSLQLSHLQAMLLFALAISVAFGFLSRRPAMERVKYIVWSLL
Ga0210410_1011901113300021479SoilMNAEMGFKLGHFQSMLLFALLISIAFGFLSRRRPIDRVKYIV
Ga0210409_1015694213300021559SoilVIAPTDFHLSHFQAMTLFALLISIAFGFLSRRRTSERVKYIIWSLFLFLLIG
Ga0242654_1023015213300022726SoilMNTEMGIKLGHLQSMLLFALLISIAFGFLSRRRPIDRVKYIVWSLF
Ga0247688_109211313300024186SoilVIVAIVFQLSHFQAMTLFALLISIAFGFLSRRRTRERVT
Ga0228598_104976933300024227RhizosphereVIATIGFTLSHFQAMTLFALLISIAFGFLSRRRTSERVKYIIWSLFLFLLIGVGI
Ga0137417_100200713300024330Vadose Zone SoilMNAGMGFHLSHFQSMLLFALLISIAFGFLSRRRPIDRVKYIVWSLFLFVAVSLSVDR
Ga0137417_122878623300024330Vadose Zone SoilMKPRGAGKLDLAMKFHLSHLQGMLLFALLISIAFGFLSRRRPLDRVKYIAWSLLLFLLFGIGI
Ga0209890_1022869923300026291SoilMTLHFSHFQSMLLFALAISVAFGFLSRRPALERLKYIGWSVLMFLL
Ga0209131_126289433300026320Grasslands SoilMKAAMEFKLDHLQSMLFFAVLISIAFGFLSRRRPIDR
Ga0209802_130626313300026328SoilMNAGMAFKLSHLQSMLLFALLISIAFGFLSRRRPMDRVKYIVWSLFLFLLIG
Ga0209267_122811613300026331SoilMNAGMGFKLRHLQSMLLFALLISIAFGFLSRRQLIERV
Ga0209056_1010952813300026538SoilMNAGMGFHLSHFQSLLLFALLISIAFGFLSRRRPIDRVKYI
Ga0209056_1061040323300026538SoilMNVGPGFKLTHLQAMLLFALAISIAFGFLSRRKPIERVKYIVWSL
Ga0179593_110751413300026555Vadose Zone SoilMVAGVHLSHFPAMIIFALIISVSFGFLSRRRPIDRIKYILWSLFL
Ga0209529_103678213300027334Forest SoilMIFNLSHLQAMILFALMVSIAFGFLSRRPMRERAKYVGWSFLLFVL
Ga0209734_109345823300027535Forest SoilMNFHFTHFQAMLLFALVISVAFGFLSRRRPLDRVK
Ga0209220_101872933300027587Forest SoilMNAGMGFNLSHFQSLLLFALLISIAFGFLSRRRPIDRVKYIVWSLFLFLLIGVGIG
Ga0209180_1009177813300027846Vadose Zone SoilVSAALGFRLSHLQAMVLFALIISVAFGFLSRRRPR
Ga0209180_1039658113300027846Vadose Zone SoilMNAETGFKLSHLQSMLLFALVISVAFGFLSRRRPIDRVKYIVWS
Ga0209180_1059887613300027846Vadose Zone SoilMSAGMGFNLSHFQSMVLFALLISIAFGFLSRRRPIDRVKYIVWSLFLFLLVGVGI
Ga0209701_1001505883300027862Vadose Zone SoilMSVRLNHFQAMLFFALVISVAFGFLSRRRPLDRVKYMLWSLFLFLLV
Ga0209283_1033468713300027875Vadose Zone SoilMKFHLSHLQAMLLFALMISIAFGFLSRRRPLDRIRYI
Ga0209283_1044145333300027875Vadose Zone SoilMNAGMEFKLSHLQSMLLFALLISIAFGFLSRRRPIDRVKYVVWSLFLFLLIGVGIGWAM
Ga0209488_1063646533300027903Vadose Zone SoilMSGGMGFKLSHLQSLLLFAVLISVAFGFLSRRRPIDRLKYIVWSLFLFLLIGVGIG
Ga0265357_104212013300028023RhizosphereVIATIGFTLTHFQAMTLFALLISIAFGFLSRRRTSDRVKYIIW
Ga0257175_112410113300028673SoilVSAAIGFSLSHLQAMLLFALVISIAFGFLSRRQPVERVKYIVWSLFLFLLI
Ga0302225_1052813423300028780PalsaVIEASEVRLSHFQSMLLFALVISIAFGFLSRRRPLDRVKYILWSLFLFLVI
Ga0308309_1047943713300028906SoilVILAIAFTLSHFQSMTLFALLISVAFGFLSRRRTNERVKY
Ga0222749_1032294513300029636SoilMTLQLSHLQAMLLFALAISVAFGFLSRRPAMDRLKYIVWSLF
Ga0265773_101344913300031018SoilVIATIGFTLTHFQAMTLFALLISIAFGFLSRRRTSDRVKYIIWSLFL
Ga0170834_10039013713300031057Forest SoilMMPPHEFKLSHFQTMVIFALVISIAFGFLSRRGTYKRAKYILWSFILFLLIGV
Ga0265320_1016277113300031240RhizosphereVIAAMAFTLTHFQAMTLFALLISIAFGFLSRRRTSERVKY
Ga0265320_1047697613300031240RhizosphereVTVPGDFHLTHFQAMVLFALLISIAFGFLSRRRTSDRVKYILWSLFL
Ga0302326_1287457523300031525PalsaMTEDAGVRLSHLQAMVLFAVVISMAFGFLSRRRPADRIRYMAWSLFL
Ga0310915_1085692223300031573SoilMTADVGLKLSHFQAMLLFALLISIVFGFLSRRRPVERVKYVIWSL
Ga0310686_111259884133300031708SoilVIAPTDFHLSHFQAMTFFALLISIAFGFLSRRRTSDR
Ga0307474_1016449033300031718Hardwood Forest SoilVTSAADFHLSHFQAMVLFALLISIAFGFLSRRRTNERVKY
Ga0307474_1030113313300031718Hardwood Forest SoilMNAGMGFKLSHLQAMLLFALLISIAFGFLSRRRPIERV
Ga0307469_1178369723300031720Hardwood Forest SoilMNLQLSHLQSMLLFALVISVAFGFLSRRSPLDRVKYIAWSLLLFLLIGISIGWAMY
Ga0307475_1012157643300031754Hardwood Forest SoilMNVGTGFKLSHLQSMLLFALLISIAFGFLSRRRPI
Ga0307475_1020492233300031754Hardwood Forest SoilMKAAMEFKLDHLQSMLLFAVLISIAFGFLSRRRPIDRVKYIVWSLFLFLL
Ga0307475_1089091133300031754Hardwood Forest SoilMNAAMGFKLSHLQSMLFFALLISIAFGFLSRRRPIDRAKYIVWSLFLFLL
Ga0307473_1022755513300031820Hardwood Forest SoilMNAETGIKLSHLQSMLLFAVVISIAFGFLSRRRPIDR
Ga0307478_1138449213300031823Hardwood Forest SoilLSAMKFHLSHLQAMLLFALLISVAFGFLSRRRPLDRVKYIAWS
Ga0307479_1003722473300031962Hardwood Forest SoilMNAAVGFKLSHLQSMLFFALLISIAFGFLSRRRPIDRAKYIVWSLF
Ga0307479_1020422343300031962Hardwood Forest SoilMRFHLSHLQAMLLFALMISIAFGFLSRRRPMDRVKYMVWSLLL
Ga0311301_1265260023300032160Peatlands SoilMSGGMGFKLSHLQSMLLFAVLISIAFGFLSRRRPIERVKYIVWSLFLFL
Ga0307471_10084035513300032180Hardwood Forest SoilMNAGMGFHLSHFQSLLLFALLISIAFGFLSRRRPIDRVKYIVWSLFLFLLIGVGIGW
Ga0307472_10018028133300032205Hardwood Forest SoilMSLHLSHLQAMLLFAVVISVAFGFLSRRPPMERLKYILWSLGLF
Ga0371488_0036738_2_1123300033983Peat SoilVIPANGFALTHFQAFLLFAAVISIAFGFLGRRRPKDR

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.