Metagenome / Metatranscriptome Family F036321

Basic Information
Family ID	F036321
Family Type	Metagenome / Metatranscriptome
Number of Sequences	170
Average Sequence Length	47 residues
Representative Sequence	MADKRALKLIGIMFAALTLMVISTAAVVVAGHAASSGEYVKLVDLHD
Number of Associated Samples	140
Number of Associated Scaffolds	170

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.18 %
% of genes near scaffold ends (potentially truncated)	34.12 %
% of genes from short scaffolds (< 2000 bps)	86.47 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Most Common Taxonomy
Group	Bacteria (85.882 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.118 % of family members)
Environment Ontology (ENVO)	Unclassified (40.588 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.176 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 56.00% β-sheet: 0.00% Coil/Unstructured: 44.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 170 Family Scaffolds
PF00072	Response_reg	7.65
PF13433	Peripla_BP_5	5.29
PF00583	Acetyltransf_1	2.35
PF05239	PRC	1.76
PF11154	DUF2934	1.76
PF05930	Phage_AlpA	1.18
PF12681	Glyoxalase_2	1.18
PF04679	DNA_ligase_A_C	1.18
PF07963	N_methyl	1.18
PF12244	DUF3606	1.18
PF03061	4HBT	1.18
PF02586	SRAP	0.59
PF13360	PQQ_2	0.59
PF02743	dCache_1	0.59
PF07969	Amidohydro_3	0.59
PF13361	UvrD_C	0.59
PF13673	Acetyltransf_10	0.59
PF00771	FHIPEP	0.59
PF01266	DAO	0.59
PF02559	CarD_CdnL_TRCF	0.59

COG ID	Name	Functional Category	% Frequency in 170 Family Scaffolds
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.18
COG3311	DNA-binding transcriptional regulator AlpA	Transcription [K]	1.18
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.59
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.59

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.88 %
Unclassified	root	N/A	14.12 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.88 %
Unclassified	root	N/A	14.12 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.88 %
Unclassified	root	N/A	14.12 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	78.24 %
Unclassified	root	N/A	14.12 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.59 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.59 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	75.29 %
Unclassified	root	N/A	14.12 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.59 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.59 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.59 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	72.94 %
Unclassified	root	N/A	14.12 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.59 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.59 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.59 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	72.35 %
Unclassified	root	N/A	14.12 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.59 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.59 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.59 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	62.35 %
Unclassified	root	N/A	14.12 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	2.35 %
Stenotrophomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas	0.59 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.59 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.59 %

Name	Rank	Taxonomy	Distribution
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	15.29 %
Unclassified	root	N/A	14.12 %
unclassified Afipia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia	2.35 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	2.35 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.59 %
Bradyrhizobium icense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	0.59 %
Stenotrophomonas maltophilia group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group	0.59 %
Microvirga aerophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga aerophila	0.59 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.59 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.12 %
Bradyrhizobium sp. sGM-13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	6.47 %
Bradyrhizobium sp. 190	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 190	4.12 %
Bradyrhizobium sp. AUGA SZCCT0283	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	2.94 %
Afipia sp. P52-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. P52-10	2.35 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	2.35 %
Bradyrhizobium sp. sBnM-33	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sBnM-33	1.18 %
Stenotrophomonas maltophilia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	0.59 %
Bradyrhizobium sp. NAS80.1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	0.59 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.59 %
Bradyrhizobium icense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	0.59 %
Microvirga aerophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga aerophila	0.59 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.59 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.59 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10857007	Not Available	577	Open in IMG/M
3300002568\|C688J35102_119426291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	693	Open in IMG/M
3300004463\|Ga0063356_104152426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	623	Open in IMG/M
3300005172\|Ga0066683_10099961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1760	Open in IMG/M
3300005174\|Ga0066680_10083072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1935	Open in IMG/M
3300005175\|Ga0066673_10528371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	693	Open in IMG/M
3300005186\|Ga0066676_10398250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	928	Open in IMG/M
3300005331\|Ga0070670_100512266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1068	Open in IMG/M
3300005334\|Ga0068869_100049757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3035	Open in IMG/M
3300005334\|Ga0068869_101146584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	681	Open in IMG/M
3300005335\|Ga0070666_10213290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1360	Open in IMG/M
3300005338\|Ga0068868_101434845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	645	Open in IMG/M
3300005347\|Ga0070668_100021450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	4880	Open in IMG/M
3300005347\|Ga0070668_100093777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2369	Open in IMG/M
3300005353\|Ga0070669_101495446	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300005354\|Ga0070675_100525196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1068	Open in IMG/M
3300005364\|Ga0070673_101297080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	684	Open in IMG/M
3300005440\|Ga0070705_101681870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sBnM-33	536	Open in IMG/M
3300005444\|Ga0070694_100887077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	736	Open in IMG/M
3300005455\|Ga0070663_100185363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1617	Open in IMG/M
3300005456\|Ga0070678_100686088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	921	Open in IMG/M
3300005457\|Ga0070662_100299234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1307	Open in IMG/M
3300005457\|Ga0070662_101941248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	509	Open in IMG/M
3300005543\|Ga0070672_100095512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2404	Open in IMG/M
3300005547\|Ga0070693_101173355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	589	Open in IMG/M
3300005555\|Ga0066692_10004906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5851	Open in IMG/M
3300005578\|Ga0068854_100027604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	3914	Open in IMG/M
3300005618\|Ga0068864_100089141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	2717	Open in IMG/M
3300005719\|Ga0068861_100091536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2401	Open in IMG/M
3300005841\|Ga0068863_100667734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1031	Open in IMG/M
3300005843\|Ga0068860_101693031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	654	Open in IMG/M
3300005844\|Ga0068862_100176302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1916	Open in IMG/M
3300005844\|Ga0068862_102449751	Not Available	534	Open in IMG/M
3300006038\|Ga0075365_10095168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2034	Open in IMG/M
3300006038\|Ga0075365_10785635	Not Available	672	Open in IMG/M
3300006042\|Ga0075368_10068970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1426	Open in IMG/M
3300006177\|Ga0075362_10073820	All Organisms → cellular organisms → Bacteria	1562	Open in IMG/M
3300006177\|Ga0075362_10279722	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300006178\|Ga0075367_10634840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	679	Open in IMG/M
3300006186\|Ga0075369_10339568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. P52-10	704	Open in IMG/M
3300006195\|Ga0075366_10041698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2718	Open in IMG/M
3300006195\|Ga0075366_10170735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1319	Open in IMG/M
3300006755\|Ga0079222_12163014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. P52-10	552	Open in IMG/M
3300006796\|Ga0066665_10023581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3911	Open in IMG/M
3300006797\|Ga0066659_10256052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1313	Open in IMG/M
3300006800\|Ga0066660_10302882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1277	Open in IMG/M
3300006844\|Ga0075428_102274604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	558	Open in IMG/M
3300006881\|Ga0068865_100504658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1009	Open in IMG/M
3300006931\|Ga0097620_100197259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2097	Open in IMG/M
3300006954\|Ga0079219_11038249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. P52-10	686	Open in IMG/M
3300006969\|Ga0075419_11147701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	571	Open in IMG/M
3300007258\|Ga0099793_10110304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1279	Open in IMG/M
3300009011\|Ga0105251_10662494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. P52-10	500	Open in IMG/M
3300009012\|Ga0066710_100016179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7975	Open in IMG/M
3300009094\|Ga0111539_10513996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1395	Open in IMG/M
3300009094\|Ga0111539_10813006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	1088	Open in IMG/M
3300009100\|Ga0075418_10571922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1215	Open in IMG/M
3300009101\|Ga0105247_10062416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	2312	Open in IMG/M
3300009101\|Ga0105247_11203003	Not Available	603	Open in IMG/M
3300009156\|Ga0111538_14076174	Not Available	505	Open in IMG/M
3300009553\|Ga0105249_10162889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2156	Open in IMG/M
3300009553\|Ga0105249_12640332	Not Available	574	Open in IMG/M
3300009789\|Ga0126307_10619687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 190	873	Open in IMG/M
3300009840\|Ga0126313_10794001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	770	Open in IMG/M
3300010036\|Ga0126305_10156178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 190	1422	Open in IMG/M
3300010037\|Ga0126304_10451106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	861	Open in IMG/M
3300010038\|Ga0126315_11024317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	554	Open in IMG/M
3300010039\|Ga0126309_11060441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	548	Open in IMG/M
3300010040\|Ga0126308_10390374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	927	Open in IMG/M
3300010041\|Ga0126312_11452316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	508	Open in IMG/M
3300010042\|Ga0126314_10746996	Not Available	718	Open in IMG/M
3300010044\|Ga0126310_10986339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	662	Open in IMG/M
3300010045\|Ga0126311_10295258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1218	Open in IMG/M
3300010045\|Ga0126311_11337064	Not Available	596	Open in IMG/M
3300010147\|Ga0126319_1371837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	711	Open in IMG/M
3300010159\|Ga0099796_10201902	Not Available	807	Open in IMG/M
3300010166\|Ga0126306_10982445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	687	Open in IMG/M
3300010371\|Ga0134125_10863684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sBnM-33	994	Open in IMG/M
3300010371\|Ga0134125_12572722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group → Stenotrophomonas maltophilia	553	Open in IMG/M
3300010373\|Ga0134128_10888808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	986	Open in IMG/M
3300010400\|Ga0134122_11237482	Not Available	750	Open in IMG/M
3300011119\|Ga0105246_10666191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 190	908	Open in IMG/M
3300011119\|Ga0105246_10925410	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300012203\|Ga0137399_10334418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1256	Open in IMG/M
3300012204\|Ga0137374_10240181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1527	Open in IMG/M
3300012212\|Ga0150985_100217008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	780	Open in IMG/M
3300012212\|Ga0150985_114172504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	541	Open in IMG/M
3300012212\|Ga0150985_116128113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1068	Open in IMG/M
3300012212\|Ga0150985_119312674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 190	982	Open in IMG/M
3300012360\|Ga0137375_10304282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1440	Open in IMG/M
3300012469\|Ga0150984_101797500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	533	Open in IMG/M
3300012469\|Ga0150984_111730718	Not Available	591	Open in IMG/M
3300012469\|Ga0150984_114990950	Not Available	1196	Open in IMG/M
3300012469\|Ga0150984_118775332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	992	Open in IMG/M
3300012469\|Ga0150984_122950422	Not Available	502	Open in IMG/M
3300012899\|Ga0157299_10355141	Not Available	504	Open in IMG/M
3300012985\|Ga0164308_12266108	Not Available	505	Open in IMG/M
3300012986\|Ga0164304_10498928	All Organisms → cellular organisms → Bacteria → Proteobacteria	888	Open in IMG/M
3300013296\|Ga0157374_11515294	Not Available	694	Open in IMG/M
3300013297\|Ga0157378_13201233	Not Available	508	Open in IMG/M
3300013306\|Ga0163162_10887254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1005	Open in IMG/M
3300014745\|Ga0157377_10006309	All Organisms → cellular organisms → Bacteria	5644	Open in IMG/M
3300014968\|Ga0157379_10249504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga aerophila	1611	Open in IMG/M
3300015052\|Ga0137411_1073617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	681	Open in IMG/M
3300015371\|Ga0132258_10978851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	2137	Open in IMG/M
3300015374\|Ga0132255_101157233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1164	Open in IMG/M
3300017792\|Ga0163161_11552017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	583	Open in IMG/M
3300018056\|Ga0184623_10383508	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300018075\|Ga0184632_10019449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2872	Open in IMG/M
3300018429\|Ga0190272_10010982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4444	Open in IMG/M
3300018429\|Ga0190272_10930477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	820	Open in IMG/M
3300018431\|Ga0066655_10080782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1770	Open in IMG/M
3300018433\|Ga0066667_10148560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	1649	Open in IMG/M
3300018476\|Ga0190274_10100260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2300	Open in IMG/M
3300018476\|Ga0190274_11832320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	702	Open in IMG/M
3300021078\|Ga0210381_10192042	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300022756\|Ga0222622_10820001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	680	Open in IMG/M
3300025315\|Ga0207697_10146532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	1026	Open in IMG/M
3300025315\|Ga0207697_10188553	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300025321\|Ga0207656_10648446	Not Available	540	Open in IMG/M
3300025899\|Ga0207642_10392336	Not Available	829	Open in IMG/M
3300025908\|Ga0207643_10063369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2113	Open in IMG/M
3300025914\|Ga0207671_11104724	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300025918\|Ga0207662_10703057	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	709	Open in IMG/M
3300025918\|Ga0207662_11149378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	552	Open in IMG/M
3300025923\|Ga0207681_10578806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	926	Open in IMG/M
3300025927\|Ga0207687_10927134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	746	Open in IMG/M
3300025933\|Ga0207706_10574641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	969	Open in IMG/M
3300025937\|Ga0207669_10467882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1002	Open in IMG/M
3300025938\|Ga0207704_10259237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1310	Open in IMG/M
3300025942\|Ga0207689_10110164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2262	Open in IMG/M
3300025961\|Ga0207712_10817271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	820	Open in IMG/M
3300025961\|Ga0207712_12051362	Not Available	512	Open in IMG/M
3300025972\|Ga0207668_10891651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	791	Open in IMG/M
3300026035\|Ga0207703_10803798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	898	Open in IMG/M
3300026067\|Ga0207678_10322865	All Organisms → cellular organisms → Bacteria → Proteobacteria	1328	Open in IMG/M
3300026075\|Ga0207708_10496080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 190	1023	Open in IMG/M
3300026088\|Ga0207641_11018717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	825	Open in IMG/M
3300026118\|Ga0207675_100549289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1154	Open in IMG/M
3300026327\|Ga0209266_1274316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	533	Open in IMG/M
3300026328\|Ga0209802_1086401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	1443	Open in IMG/M
3300026343\|Ga0209159_1083807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1428	Open in IMG/M
3300026538\|Ga0209056_10216485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1387	Open in IMG/M
3300027903\|Ga0209488_10845848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	645	Open in IMG/M
3300028380\|Ga0268265_10121258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2154	Open in IMG/M
3300028381\|Ga0268264_10768068	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300028719\|Ga0307301_10268674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	558	Open in IMG/M
3300028794\|Ga0307515_10346726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 190	1134	Open in IMG/M
3300028794\|Ga0307515_10511472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	811	Open in IMG/M
3300028802\|Ga0307503_10356786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	751	Open in IMG/M
3300028811\|Ga0307292_10205085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	811	Open in IMG/M
3300028814\|Ga0307302_10533475	Not Available	583	Open in IMG/M
3300028824\|Ga0307310_10174493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1004	Open in IMG/M
3300028880\|Ga0307300_10328937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	523	Open in IMG/M
3300028885\|Ga0307304_10414761	Not Available	609	Open in IMG/M
3300030905\|Ga0308200_1013998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 190	1199	Open in IMG/M
3300030905\|Ga0308200_1092319	Not Available	633	Open in IMG/M
3300030993\|Ga0308190_1197673	Not Available	505	Open in IMG/M
3300031058\|Ga0308189_10081056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	985	Open in IMG/M
3300031058\|Ga0308189_10220266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sGM-13	699	Open in IMG/M
3300031092\|Ga0308204_10029241	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300031092\|Ga0308204_10289650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	544	Open in IMG/M
3300031123\|Ga0308195_1055088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	585	Open in IMG/M
3300031184\|Ga0307499_10009992	All Organisms → cellular organisms → Bacteria → Proteobacteria	1906	Open in IMG/M
3300031366\|Ga0307506_10457116	All Organisms → cellular organisms → Bacteria → Proteobacteria	534	Open in IMG/M
3300031548\|Ga0307408_102016971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	555	Open in IMG/M
3300032002\|Ga0307416_102894635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	574	Open in IMG/M
3300032005\|Ga0307411_10174665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1624	Open in IMG/M
3300032126\|Ga0307415_100160495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1742	Open in IMG/M
3300032126\|Ga0307415_100167756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1709	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	54.12%
Environmental	Environmental	45.88%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	54.12%
Terrestrial	Environmental → Terrestrial	42.94%
Aquatic	Environmental → Aquatic	2.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	42.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.00%
Roots	Host-Associated → Plants → Roots	6.47%
Sediment	Environmental → Aquatic → Sediment	1.76%
Freshwater	Environmental → Aquatic → Freshwater	1.18%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.29%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.35%
Loam	Environmental → Terrestrial → Soil → Loam	5.29%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	5.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.76%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.18%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.59%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.59%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.24%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.24%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	5.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.18%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.18%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.59%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.12%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	7.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.47%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	5.29%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.12%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.12%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.94%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.35%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.35%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.18%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.18%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.18%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.18%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.18%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.18%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	1.18%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.59%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.59%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.59%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006186	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2)	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028794	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031123	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_196 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F036321

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_108570072	3300001686	Soil	MVDKRALKLIGVLFAALTLIVVFTAAAVVASHAASGVSGEYLKMVDLRD*
C688J35102_1194262912	3300002568	Soil	MVDKRALKLIGVLFAALTLIVVFTAAAVVAGHAASGVSGEYLKMVDLRD*
Ga0063356_1041524261	3300004463	Arabidopsis Thaliana Rhizosphere	MADKRALKLIGIMFAALTLMVISTAAVVVAGHAASSGEYVKLVDLHD*
Ga0066683_100999612	3300005172	Soil	MADKRALKFIGIMFAALTLMVISTAAVVVAGRAASSVNGEYLKLVNLHD*
Ga0066680_100830722	3300005174	Soil	MADKRALKLIGIMFAALTLMVISTAAVVVAGHAASSVNGEYLKLVNLHD*
Ga0066673_105283711	3300005175	Soil	MADKRALKLVGIMFATLTLMAILAAAVAVAGHAASSVNGEYLKLVDLHD*
Ga0066676_103982502	3300005186	Soil	MADKRALKLIGIMFAILTLMVILTAAVAVAGHAASSVNGEYLKLVDLHD*
Ga0070670_1005122661	3300005331	Switchgrass Rhizosphere	MADKRALKLIGITFAALTLMVIAMAAVVASHAASSANGGYLELVDL
Ga0068869_1000497576	3300005334	Miscanthus Rhizosphere	MADKRALKLIGITFAALTLMVIAMAAVVASHAASSANGGYLELVDLRD*
Ga0068869_1011465842	3300005334	Miscanthus Rhizosphere	MADRRALKLIGIMFAALTLMVISRAAVVVAGQAASSVDGEYLNLAVHRD*
Ga0070666_102132902	3300005335	Switchgrass Rhizosphere	VADKRALKLIGIVFATLTLMVVSTGAVVVTGHAASSAGGGYPEWAGSRD*
Ga0068868_1014348452	3300005338	Miscanthus Rhizosphere	MADQRALKLIGIMFAALTLMVISRAAVVVAGQAASSVDGEYLNLAVHRD*
Ga0070668_1000214505	3300005347	Switchgrass Rhizosphere	MADKRALKLIGIMLAALTLMVSSTAAVVVAGHAASSANGEYLKLVDVRD*
Ga0070668_1000937773	3300005347	Switchgrass Rhizosphere	MADKHALKLIGIMFAALTLMVISTAAVVVAGHAASSVSGEYLKLVDVRD*
Ga0070669_1014954462	3300005353	Switchgrass Rhizosphere	VADKRALKLIGIVFATLTLMVVSTGAVVVTGHAASSAGGGYPEWAG
Ga0070675_1005251962	3300005354	Miscanthus Rhizosphere	MADKRALKLIGVIFAALTLMVISTAAVVVTGHAANSGEYVKLVDLHD*
Ga0070673_1012970802	3300005364	Switchgrass Rhizosphere	FAMADKRALKLIGIMLAALTLMVSSTAAVVVAGHAASSANGEYLKLVDHRD*
Ga0070705_1016818701	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RALKLIGIMFAALTLMVISRAAVVVAGQAASSVDGEYLNLAVHRD*
Ga0070694_1008870772	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	DRRALKLIGIMFAALTLMVISRAAVVVAGQAASSVDGEYLNLAVHRD*
Ga0070663_1001853632	3300005455	Corn Rhizosphere	MADKRALKLIGLMFAALTMMVISTAAVVVTGHAASGVNGEYVKLVDLHD*
Ga0070678_1006860881	3300005456	Miscanthus Rhizosphere	VADKRALKLIGIVFATLTLMVVSTGAVVVTGQAASSAGGGYPEWAGSRD*
Ga0070662_1002992341	3300005457	Corn Rhizosphere	MADKRALKLIGIIFAALTLMVISTAAVVVTGHAASSGEYVKLVDLHD*
Ga0070662_1019412482	3300005457	Corn Rhizosphere	AMADKRALKLIGIMFAALTLMVISMAAVVVAGHAASSVNGEYLKLVDPRD*
Ga0070672_1000955124	3300005543	Miscanthus Rhizosphere	MADKRALKLIGVIFAALTLMVISTAAVVVTGHAANSGEYAKLVDLHD*
Ga0070693_1011733551	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	LGLIMADRRALKLIGIMFAALTLMVISRAAVVVAGQAASSVDGEYLNLAVHRD*
Ga0066692_100049065	3300005555	Soil	MADKRALKLIGIMFAALTLMVISTAAVVVAGRAASSVNGEYLKLVDLHD*
Ga0068854_1000276044	3300005578	Corn Rhizosphere	MADKRALKLIGIMLAALTLMVSSTAAVVVAGHAASSANGEYLKLVDLRD*
Ga0068864_1000891416	3300005618	Switchgrass Rhizosphere	MADKRALKLIGIMLAALTSMVSSTAAVVVAGHAASSANGEYLKLVD
Ga0068861_1000915361	3300005719	Switchgrass Rhizosphere	MADKRALKLIGIIFAALTLMVISTAAVVVTGHAANSGEYVKLVDFHD*
Ga0068863_1006677343	3300005841	Switchgrass Rhizosphere	KAELLEQGKGPMADQRALKLIGIMFAALTLMVISTAAVVVAGHATGFSGEYSELAGSRD*
Ga0068860_1016930312	3300005843	Switchgrass Rhizosphere	MADKRALKLIGIIFAALTLMVISTAAVVVTGHAANSSEYVKLVDLHD*
Ga0068862_1001763024	3300005844	Switchgrass Rhizosphere	FAMADKRALKLIGIIFAALTLMVISTAAVVVTGHAASSGEYVKLVDLRD*
Ga0068862_1024497511	3300005844	Switchgrass Rhizosphere	ALKLIGITFAALTLMVIAMAAVVASHAASSANGGYLELVDLRD*
Ga0075365_100951682	3300006038	Populus Endosphere	MADKRALKLIGIMFAALTFMVISTAAVVVAGHAANNDEYAVDLHD*
Ga0075365_107856352	3300006038	Populus Endosphere	IGIVFATLTLMVVSTGAVVVTGHAASSAGGGYPEWAGSRD*
Ga0075368_100689701	3300006042	Populus Endosphere	IMFAGLTLMVSSTAAVVVARHAASSISGEYLKLVDPRD*
Ga0075362_100738202	3300006177	Populus Endosphere	MADKHALKLIGIMFAALTLMVISTAAVVVAGHAASSVSGEYLKLVHVRD*
Ga0075362_102797222	3300006177	Populus Endosphere	MADRRALKLIGIMFATRTSMVISRAAVVVASQAASSVGGEYLNLPVHRD*
Ga0075367_106348401	3300006178	Populus Endosphere	GRFAMADKRALKLIGIMFAALTLTVVSTAAVVVAGHAANSANAEHVKLVDLRD*
Ga0075369_103395681	3300006186	Populus Endosphere	MADKRALKLIGVIFAALTLMVISTAAVVVAGHAASGEYVEVVDLRD*
Ga0075366_100416981	3300006195	Populus Endosphere	MADKRALKLIGIMFAALTLMVISTAAVVVAGHAASGEYVEVVDLRD*
Ga0075366_101707351	3300006195	Populus Endosphere	IGIMLAALTLMVSSTAAVVVAGHAASSANGEYLKLVDVRD*
Ga0079222_121630141	3300006755	Agricultural Soil	MADKRALKLIGIMLAALTLMVSSTAAVVVAGHAASSANGEYLKLVDHRD*
Ga0066665_100235812	3300006796	Soil	MADKRALKLIGVMFAALTLMVISTAAVVVAGRAASSVNGEYLKLVNLHD*
Ga0066659_102560521	3300006797	Soil	MADKRALKLIGIMFAALTLMVISTAAVVVAGRAASSVNGEYLKLVNLHD*
Ga0066660_103028821	3300006800	Soil	MADKRALKLIGIMFAALTLMVISTAAVVVTSHAASSANGEY
Ga0075428_1022746041	3300006844	Populus Rhizosphere	QGGRFAMADKRALKLIGVIFAALTLMVISTAAVVVTGHAANSSEYVKLVDLHD*
Ga0068865_1005046582	3300006881	Miscanthus Rhizosphere	MRATDEEEAYFTMADTRALKLIGVMFAALTLMVVSTAAVVVAGHPASGVNGEYPKLVDLRD*
Ga0097620_1001972592	3300006931	Switchgrass Rhizosphere	MADKRALKLIGVIFAALTLMVISTAAVVVTGHAANSSEYVKLVDLHD*
Ga0079219_110382491	3300006954	Agricultural Soil	MADKRALKLIGVMLAALTLIVSSTAAVVVAGHAASSANGEYLKLVDLRD*
Ga0075419_111477012	3300006969	Populus Rhizosphere	WKDAAMADKRALKLIGIMFAALTLMVVSTAAVVVVGHAASGTNGEYVKLDDLRD*
Ga0099793_101103042	3300007258	Vadose Zone Soil	MADKRGLKLIGIMFAALTLMVFSTAAVVVARHAASSVNGEYLKLVDLRD*
Ga0105251_106624941	3300009011	Switchgrass Rhizosphere	MADQRALKLIGIMFAALTLMVISTAAVVVAGHATG
Ga0066710_1000161795	3300009012	Grasslands Soil	MADKRALKFIGIMFAALTLMVISTAAVVVAGHAASSVNGEYLKLVNLHD
Ga0111539_105139964	3300009094	Populus Rhizosphere	MADKRALKLIGIIFAALTLMVISTAAVVVTGHAANSGEYAKLVDLHD*
Ga0111539_108130062	3300009094	Populus Rhizosphere	MADKRALKLIGVMLAALTLIVSSTAAVVVAGHAASSANGEYLKLVDVRD*
Ga0075418_105719223	3300009100	Populus Rhizosphere	MADRRALKLIGIMFATRTLMVISRAAVVVASQAASSVGGEYLNLPVHRD*
Ga0105247_100624164	3300009101	Switchgrass Rhizosphere	MADQRALKLIGIMFAALTLMVISTAAVVVAGHATGFSGEYSELAGSRD*
Ga0105247_112030032	3300009101	Switchgrass Rhizosphere	AMTLMVISTAAVVVAGHAAGSADGDYVKMVDFRD*
Ga0111538_140761741	3300009156	Populus Rhizosphere	IGIMLAALTLMVSSTAAVVVAGHAASSANGEYLKLVDHRD*
Ga0105249_101628892	3300009553	Switchgrass Rhizosphere	MADRRALKLIGIMFATRTLMVISRAAVVVFSQAASSVGGEYLNLPVHRD*
Ga0105249_126403321	3300009553	Switchgrass Rhizosphere	ALKLIGIMFAALTLMVISTAAVVVAGHAASSVSGEYLKLVDVRD*
Ga0126307_106196872	3300009789	Serpentine Soil	WIGIMFAALTLMVISTAAVVVTGHAANSGEYVKLVDLHD*
Ga0126313_107940012	3300009840	Serpentine Soil	MADKRALKLIGIMFAALTLTVISTAAVVVAGHAASGEYVELVDLRD*
Ga0126305_101561782	3300010036	Serpentine Soil	MADKRALKLIGIIFAALTMMVISTAAVVVTGHAANSGEYVKLVDLHD*
Ga0126304_104511062	3300010037	Serpentine Soil	MADKRALKLIGIIFAALTFMVISTAAVVVAGHAANNGEYGKSVDLHD*
Ga0126315_110243171	3300010038	Serpentine Soil	MADKRALKLIGIMFAALTLTVISTAAVVVAGHAASSNGEYVKLVDLHD*
Ga0126309_110604411	3300010039	Serpentine Soil	MADKRGLKLIGIMFAALTFMVISAAAVVVAGHAASGEYVELVDLRD*
Ga0126308_103903742	3300010040	Serpentine Soil	MADKRALKWIGIMFAALTLMVISTAAVVVTGHAANSGEYVKLVDLHD*
Ga0126312_114523162	3300010041	Serpentine Soil	MADKRALRLIGIIFAALTLMVISTAAVVVTGHAAGSANGDYVILVDPRD*
Ga0126314_107469961	3300010042	Serpentine Soil	MADKRALRLIGIIFAALTLMVISTAAVVVTGHAANSGEYVKLVDLHD*
Ga0126310_109863391	3300010044	Serpentine Soil	MADKRALKLIGIMFAALTFMVISTAAVVVAGHAANIDEYAKSVDLHD*
Ga0126311_102952582	3300010045	Serpentine Soil	MADKRALKLIGIMFAAMTFMVISTAAVVVAGHAANNDEYVKSVNLHD*
Ga0126311_113370642	3300010045	Serpentine Soil	GRFAMADKRALRLIGIIFAALTLMVISTAAVVVTGHAANSGEYVKLVDLHD*
Ga0126319_13718372	3300010147	Soil	MADKRALKLIGFMFAALTMTVISTAAVVVAGHAASGVNGEYVKLVDLHD*
Ga0099796_102019022	3300010159	Vadose Zone Soil	LKLIGIMFAALTLMVISTAAVVVAGHATGFSGEYSELAGSRD*
Ga0126306_109824451	3300010166	Serpentine Soil	MADKRALKLIGIMFAALTLMVISTAAVVVAGHAPNSGEYVRLVDLRD*
Ga0134125_108636842	3300010371	Terrestrial Soil	MADRRALKFIGIMFAALTLMVISRAAVVVAGQAASSVDGEYLNLAVHRD*
Ga0134125_125727221	3300010371	Terrestrial Soil	DKRALKLIGIMLAALTLMVSSTAAVVVAGHAASSANGEYRKLVDLRD*
Ga0134128_108888081	3300010373	Terrestrial Soil	EGRFAMADKRALKLIGIMLAALTLMVSSTAAVVVAGHAASSANGEYLKLVDHRD*
Ga0134122_112374822	3300010400	Terrestrial Soil	MADKHALKLIGIMFAALTLMVVSTAAVVVAGQAESSVNGEYLKSVDHRD*
Ga0105246_106661911	3300011119	Miscanthus Rhizosphere	MADKRALKLIGVIFAALTLTVISTAAVVVTGHAANSGEYAKLVDLHD*
Ga0105246_109254101	3300011119	Miscanthus Rhizosphere	RLAMADKRALKLIGITFAALTLMVIAMAAVVASHAASSANGGYLELVDLRD*
Ga0137399_103344181	3300012203	Vadose Zone Soil	MADKRGLKLIGIMFAALTLMVISTAAVVVARHAASSVNGEYLKLVDLRD*
Ga0137374_102401812	3300012204	Vadose Zone Soil	MVDKRALKLIGILFAALTLMVVSMAVVVVAGHAANSVSGEYLKLVDLRD*
Ga0150985_1002170081	3300012212	Avena Fatua Rhizosphere	MADKRALKWIGIMFAALTLMVGSTAAVMVAGHAASSGEYVKLVDLRD*
Ga0150985_1141725042	3300012212	Avena Fatua Rhizosphere	MADKRALKLIGIMFAALTLMVISTAAVMVAGYAASGEYVKWVDLRD*
Ga0150985_1161281133	3300012212	Avena Fatua Rhizosphere	VALKGRLAMADKRALKLIGITFAAVTLMVIATAVIAASHAASSANGRYLELVDLRD*
Ga0150985_1193126741	3300012212	Avena Fatua Rhizosphere	GIFAMADKRALKLIGIMFAALTFMVISTAAVVVAGHAASGEYVELVDLRD*
Ga0137375_103042821	3300012360	Vadose Zone Soil	MVDKRALKLIGILFAALTLMVVSMAVGVVAGHAGNSVSAEYLKLVDLRD*
Ga0150984_1017975001	3300012469	Avena Fatua Rhizosphere	QGGRFAMADKRALKLIGIMFAALTLTVISTAAVVVAGHAASGEYVELVDLRD*
Ga0150984_1117307182	3300012469	Avena Fatua Rhizosphere	MADKRALKLIGIVFAALTIMVISTAAVMVAGHAASGVNGEYVKLVDLHD*
Ga0150984_1149909502	3300012469	Avena Fatua Rhizosphere	MADRHALKLIGIMFAALTLMVISTAAVVVAGHATGFSGEYSELAGSRD*
Ga0150984_1187753323	3300012469	Avena Fatua Rhizosphere	VADKRALKLIGIVFGTLTLMVISTGAVVVAGSATSSAEGRYLESAYIRD*
Ga0150984_1229504222	3300012469	Avena Fatua Rhizosphere	ALKLIGIMFAALTLMVISTAAVVVAGHATGFSGENSELAGSRD*
Ga0157299_103551411	3300012899	Soil	RFAMADKRALKLIGVIFAALTLMVISTAAVVVTGHAANSSEYVKLVDLHD*
Ga0164308_122661081	3300012985	Soil	VADKRALKLIGIVFGTLTLMVISTGAIVVAGSATSSAEGGYLESAYIRD*
Ga0164304_104989282	3300012986	Soil	VADKRALKLIGIVFGTLTLMVISTGAVVVAGSATSSAEGGYLESAYIRD*
Ga0157374_115152941	3300013296	Miscanthus Rhizosphere	DKRALKLIGIVFATLTLMVVSTGAVVVTGHASRSAGGGYPEWAGSRD*
Ga0157378_132012331	3300013297	Miscanthus Rhizosphere	LKLIGIMTAALTLMVVSTAAVVVTGHATGFSGEYSELAGSRD*
Ga0163162_108872542	3300013306	Switchgrass Rhizosphere	VADKRALKLIGVVFGTLTLMVISAGAVVVAGSATSSEGGYLE
Ga0157377_100063091	3300014745	Miscanthus Rhizosphere	FAALTLMVIAMAAVVASHAASSANGGYLELVDLRD*
Ga0157379_102495041	3300014968	Switchgrass Rhizosphere	VADKRALKLIGIVFATLTLMVVSTGAVVVTGHAASSAGG
Ga0137411_10736172	3300015052	Vadose Zone Soil	LEGRFAMADKRGLKLIGIMFAALTLMVISTAAVVVARHAASSVNGEYLKLVDLRD*
Ga0132258_109788511	3300015371	Arabidopsis Rhizosphere	VADKRALKLIGIVFATATLMVMSTGVVVVTGHAASSADRGYLE*
Ga0132255_1011572331	3300015374	Arabidopsis Rhizosphere	MADKRALKLIGFMFAALTMMVISTAAVVVAGHAASGVNGEYIKLVAPHD*
Ga0163161_115520172	3300017792	Switchgrass Rhizosphere	MADKRALKLIGVIFAALTLMVISTAAVVVTGHAANSSEYVKLVDLHD
Ga0184623_103835083	3300018056	Groundwater Sediment	FAIADKRALKLIGIMFAALTLMVMSTAAVVVAGHAASGVNGEYVKLADLHD
Ga0184632_100194493	3300018075	Groundwater Sediment	MADKRALKLIGIMFAALTLMVMSTAAVVVAGHAASGVNGEYVKLADLHD
Ga0190272_100109824	3300018429	Soil	MADKRALKLIGIMFATLTLMVISTAVVVVAGHAASSVSGEYLKLVDLRD
Ga0190272_109304772	3300018429	Soil	MPDKRALKLIGIMFAALTLAVISTAAVVVAGHAASSVNVEYQIGGPS
Ga0066655_100807825	3300018431	Grasslands Soil	MADKRALKLIGIMFAALTLMVISMAAVVVAGHAASSVNGEYLKLVNLHD
Ga0066667_101485603	3300018433	Grasslands Soil	MADKRALKLIGVMFAALTLMVISTAAVVVAGHAASSVNGEYLKLVNLHD
Ga0190274_101002603	3300018476	Soil	MADKRALKLIGIIFAALTLMVISTAAVVVTGHAASSGEYVKLVDLRD
Ga0190274_118323202	3300018476	Soil	MADKRALKLIGIMFAALTFMVISTAAVVVAGHAANNDEYAKSVDLHD
Ga0210381_101920421	3300021078	Groundwater Sediment	KRALKLIGIMFAALTMMVISTAAVVVAGHAASGVNGEYLKLVDLHD
Ga0222622_108200012	3300022756	Groundwater Sediment	MADKRALKLIGIMFAALTMMVISTAAVVVAGHAASGVNGEYLKLVDLHD
Ga0207697_101465322	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MADKRALKLIGIMLAALTLMVSSTAAVVVAGHAASSANGEYLKLVDVRD
Ga0207697_101885531	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MADKRALKLIGITFAALTLMVIAMAAVVASHAASSANG
Ga0207656_106484461	3300025321	Corn Rhizosphere	MADKRALKLIGITFAALTLMVIAMAAVVASHAASSANGGYLELVDLRD
Ga0207642_103923361	3300025899	Miscanthus Rhizosphere	MADKHALKLIGIMFAALTLMVISTAAVVVAGHAASSVSGEYLKLVDVRD
Ga0207643_100633691	3300025908	Miscanthus Rhizosphere	MADKRALKLIGIMLAALTLMVSSTAAVVVAGHAASSANG
Ga0207671_111047241	3300025914	Corn Rhizosphere	MADRRALKLIGIMFAALTLMVISRAAVVVAGQAASSVDGEYLNLAVHRD
Ga0207662_107030573	3300025918	Switchgrass Rhizosphere	VADKRALKLIGIVFATLTLMVVSTGAVVVTGQAASSAGGGYPEWAGSRD
Ga0207662_111493781	3300025918	Switchgrass Rhizosphere	FAMADKRALKLIGIMLDALTLMVSSTAAVVVAGHAASSANGEYLKLVDHRD
Ga0207681_105788062	3300025923	Switchgrass Rhizosphere	MADKRALKLIGVIFAALTLMVISTAAVVVTGHAANSGEYVKLVDLHD
Ga0207687_109271341	3300025927	Miscanthus Rhizosphere	MADKRALKLIGITFAALTLMVIAMAAVVASHAASS
Ga0207706_105746413	3300025933	Corn Rhizosphere	MADKRALKLIGIIFAALTLMVISTAAVVVTGHAASSGEYVKLVDLR
Ga0207669_104678821	3300025937	Miscanthus Rhizosphere	MADKRALKLIGIMLAALTLMVSSTAAVVVAGHAASSANGEYLK
Ga0207704_102592372	3300025938	Miscanthus Rhizosphere	MADKRALKLIGVIFAALTLMVISTAAVVVTGHAANSSEYVKLVDLRD
Ga0207689_101101642	3300025942	Miscanthus Rhizosphere	VADKRALKLIGIVFATLTLMVVSTGAVVVTGHAASSAGGGYPEWAGSRD
Ga0207712_108172711	3300025961	Switchgrass Rhizosphere	MADKRALKLIGVIFAALTLMVISTAAVVVTGHAANSSEYVKLVDL
Ga0207712_120513621	3300025961	Switchgrass Rhizosphere	MADRRALKLIGIMFATRTLMVISRAAVVVFSQAASSVGG
Ga0207668_108916512	3300025972	Switchgrass Rhizosphere	MADTRALKLIGVMFAALTLMVVSTAAVVVAGHPASSVNGEYPKLADLRD
Ga0207703_108037983	3300026035	Switchgrass Rhizosphere	MADQRALKLIGIMFAALTLMVISTAAVVVAGHATGFSGEYFELAGSHD
Ga0207678_103228651	3300026067	Corn Rhizosphere	MADKRALKLIGLMFAALTMMVISTAAVVVTGHAASGVNGEYVKLVDLHD
Ga0207708_104960801	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	SWPCQGGRFAMADKRALKLIGVIFAALTLMVISTAAVVVTGHAANSSEYVKLVDLHD
Ga0207641_110187171	3300026088	Switchgrass Rhizosphere	MADQRALKLIGIMFAALTLMVVSTAAVVVTGHATGFSGEYSELAGSHD
Ga0207675_1005492891	3300026118	Switchgrass Rhizosphere	MADKRALKLIGIIFAALTLMVISTAAVVVTGHAANSSEYVKLVDLHD
Ga0209266_12743162	3300026327	Soil	MADKRALKFIGIMFAALTLMVISTAAVVVAGRAAS
Ga0209802_10864012	3300026328	Soil	MADKRALKLIGIMFAALTLMVISTAAVVVAGHAASSVNGEYLKLVNLHD
Ga0209159_10838072	3300026343	Soil	MADKRALKFIGIMFAALTLMVISTAAVVVAGRAASSVNGEYLKLVNLHD
Ga0209056_102164852	3300026538	Soil	MADKRALKLIGVMFAALTLMVISTAAVVVAGRAASSVNGEYLKLVNLHD
Ga0209488_108458482	3300027903	Vadose Zone Soil	MVDKRALKLIGVLFAALTLIVVFTAAAVVAGHAASGVSGEYLKMVDLRD
Ga0268265_101212584	3300028380	Switchgrass Rhizosphere	MADRRALKLIGIMFATRTLMVISRAAVVVASQAASSVGGEYLNLPVHRD
Ga0268264_107680683	3300028381	Switchgrass Rhizosphere	VADKRALKLIGIVFATLTLMVVSTGAVVVTGHAASS
Ga0307301_102686742	3300028719	Soil	MADKRALKLIGIMFAALTLMVISTAAVVVAGHATGFSGEYSELAGSRD
Ga0307515_103467262	3300028794	Ectomycorrhiza	MADKRALKLIGIIFAALTMMVISTAAVVVTGHAANSGEYVKLVDLHD
Ga0307515_105114722	3300028794	Ectomycorrhiza	MADQRALKLIGIMFAALTLMVISTAAVVVAGHATGFSGELF
Ga0307503_103567861	3300028802	Soil	MADKRALKLIGFMFAALTMTVISTAAVVVAGHAASGVNGEYVKLVDLHD
Ga0307292_102050851	3300028811	Soil	MADQRALKLIGIMFAALTLMVISTAAVMVAGYAASGEYVKWVYLRD
Ga0307302_105334752	3300028814	Soil	MADKRALTLIGIVFAALTMMVISTAAVLVAGHAASGVKGEYVKLVDLHD
Ga0307310_101744931	3300028824	Soil	MADKRALKLIGIMFAALTLMVISTAAVMVTGYAASGEYVKWVDLRD
Ga0307300_103289372	3300028880	Soil	MADKRALKLIGIMFAALTMMVISTAAVLVAGHAASGVKGEYVKLVDLHD
Ga0307304_104147611	3300028885	Soil	KRALTLIGIVFAALTMMVISTAAVLVAGHAASGVKGEYVKLVDLHD
Ga0308200_10139982	3300030905	Soil	MADKRALKLIGIMFAALTLMVISTAAVMVAGYAASGEYVKWVDLRD
Ga0308200_10923192	3300030905	Soil	MADKRALTLIGIVFAALTMMVISTAAVVVAGHAASGVNGEYVKLVDLHD
Ga0308190_11976731	3300030993	Soil	KAYFTMADKRALKLIGVTFAALTLMVVSTAAVVVAGHPASSVNGEYTKLVDLRD
Ga0308189_100810561	3300031058	Soil	MADKRALKWIGIMFAALTLMVISTAAVVVAGHAAGSANGDDVKLVELRD
Ga0308189_102202662	3300031058	Soil	MADKRALKLIGIMFAALTLMVISTAAVMVTGHAADSGNGDYVKLVDLRD
Ga0308204_100292413	3300031092	Soil	MADKRALKLIGIMFAALTMMVISTAAVVVAGHAASGVNGEHVKLVDLHD
Ga0308204_102896502	3300031092	Soil	MADKRALKWIGITFAALTLMVISTAAVVVAGHAAGSANGDYVKLVDLRD
Ga0308195_10550882	3300031123	Soil	MADRRALKLIGIMFAALTLMVISTAAVVVTGHAAGSANGDYVILVNPRD
Ga0307499_100099923	3300031184	Soil	MVDKRALKLIGVLFAALTLIVVFTAAAVVASHAASGVSGEYLKMVDLRD
Ga0307506_104571162	3300031366	Soil	VADKRALKLIGIVFGTLTLMVISTGAVVVAGSATSSAEGGYLE
Ga0307408_1020169712	3300031548	Rhizosphere	MADRRALKLIGIIFAALTLMVISTAAVVVTGHAANSGEYVKLVDLHD
Ga0307416_1028946351	3300032002	Rhizosphere	MADKRALKLIGIMFAALTLMVISTAAVVVAGHAANSGEYVKLVDLHD
Ga0307411_101746651	3300032005	Rhizosphere	KLIGIIFAALTLMVISTAAVVVTGHAANSGEYVKLVDLHD
Ga0307415_1001604955	3300032126	Rhizosphere	MADRRALKLIGIIFAALTLMVISTAAVVVTGHAANSGEYVKLV
Ga0307415_1001677565	3300032126	Rhizosphere	MADKRALKLIGIMFAALTFMVISTAAVVVAGHAANSGEYVKLVDLHD

Hidden Markov Model


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