NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F035808

Metagenome / Metatranscriptome Family F035808

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F035808
Family Type Metagenome / Metatranscriptome
Number of Sequences 171
Average Sequence Length 65 residues
Representative Sequence LFRRIGVAAAIVLVAAGLAVPAAQAKAHMLVGIQDDAMTLRGNPTFTFPTLKQLRTQIVRINLN
Number of Associated Samples 144
Number of Associated Scaffolds 171

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 92.40 %
% of genes near scaffold ends (potentially truncated) 98.83 %
% of genes from short scaffolds (< 2000 bps) 98.25 %
Associated GOLD sequencing projects 142
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil
(36.842 % of family members)
Environment Ontology (ENVO) Unclassified
(46.199 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(64.327 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 64.13%    β-sheet: 0.00%    Coil/Unstructured: 35.87%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 171 Family Scaffolds
PF16363GDP_Man_Dehyd 78.95
PF01370Epimerase 15.79
PF00535Glycos_transf_2 0.58
PF13189Cytidylate_kin2 0.58
PF11790Glyco_hydro_cc 0.58


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_110633437All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300004157|Ga0062590_101231405All Organisms → cellular organisms → Bacteria732Open in IMG/M
3300004157|Ga0062590_102356572All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria561Open in IMG/M
3300004643|Ga0062591_100151063All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1620Open in IMG/M
3300005093|Ga0062594_101248137All Organisms → cellular organisms → Bacteria741Open in IMG/M
3300005171|Ga0066677_10530810All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300005179|Ga0066684_11080201All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300005186|Ga0066676_10552387All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300005294|Ga0065705_10640262All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300005365|Ga0070688_100137949All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1653Open in IMG/M
3300005406|Ga0070703_10371152All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria616Open in IMG/M
3300005440|Ga0070705_101196652All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300005451|Ga0066681_10191732All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium1219Open in IMG/M
3300005466|Ga0070685_11495078All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria520Open in IMG/M
3300005467|Ga0070706_101392777All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300005536|Ga0070697_102024927All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria515Open in IMG/M
3300005549|Ga0070704_100463602All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1093Open in IMG/M
3300005549|Ga0070704_101551907All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300005553|Ga0066695_10793290All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300005553|Ga0066695_10795157All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300005557|Ga0066704_10557463All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria745Open in IMG/M
3300005559|Ga0066700_11022111All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300005561|Ga0066699_10704042All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300005618|Ga0068864_100963065All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.845Open in IMG/M
3300005764|Ga0066903_102598663All Organisms → cellular organisms → Bacteria981Open in IMG/M
3300006034|Ga0066656_10657918All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300006237|Ga0097621_100966911All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria795Open in IMG/M
3300006755|Ga0079222_11294647All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300006796|Ga0066665_11408045All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium540Open in IMG/M
3300006914|Ga0075436_100004147All Organisms → cellular organisms → Bacteria9946Open in IMG/M
3300009038|Ga0099829_10222270All Organisms → cellular organisms → Bacteria1534Open in IMG/M
3300009147|Ga0114129_11808374All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300009156|Ga0111538_11401041All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.882Open in IMG/M
3300009789|Ga0126307_11624437All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300010042|Ga0126314_11386135All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300010043|Ga0126380_11289754All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300010087|Ga0127492_1024133All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300010096|Ga0127473_1013704All Organisms → cellular organisms → Bacteria1080Open in IMG/M
3300010102|Ga0127453_1028181All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300010104|Ga0127446_1015653All Organisms → cellular organisms → Bacteria1142Open in IMG/M
3300010109|Ga0127497_1097005All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300010114|Ga0127460_1095347All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300010115|Ga0127495_1092119All Organisms → cellular organisms → Bacteria818Open in IMG/M
3300010116|Ga0127466_1116101All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300010119|Ga0127452_1036928All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300010120|Ga0127451_1026088All Organisms → cellular organisms → Bacteria1114Open in IMG/M
3300010125|Ga0127443_1049694All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300010127|Ga0127489_1069247All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300010127|Ga0127489_1113370All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300010127|Ga0127489_1145911All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300010130|Ga0127493_1060584All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300010130|Ga0127493_1171775All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300010134|Ga0127484_1031620All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300010136|Ga0127447_1146891All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300010139|Ga0127464_1055104All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300010139|Ga0127464_1096876All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300010140|Ga0127456_1119729All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300010140|Ga0127456_1213986All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300010141|Ga0127499_1134026All Organisms → cellular organisms → Bacteria1084Open in IMG/M
3300010145|Ga0126321_1348497All Organisms → cellular organisms → Bacteria810Open in IMG/M
3300010154|Ga0127503_10410683All Organisms → cellular organisms → Bacteria1103Open in IMG/M
3300010326|Ga0134065_10301553All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300010333|Ga0134080_10480326All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300010333|Ga0134080_10517525All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300010333|Ga0134080_10689052All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300010362|Ga0126377_12368376All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300010366|Ga0126379_12975541All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300010371|Ga0134125_11265433All Organisms → cellular organisms → Bacteria805Open in IMG/M
3300010373|Ga0134128_11257675All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300010375|Ga0105239_12698826All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300010398|Ga0126383_12356837All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300010896|Ga0138111_1044407All Organisms → cellular organisms → Bacteria807Open in IMG/M
3300010905|Ga0138112_1093305All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300010905|Ga0138112_1153214All Organisms → cellular organisms → Bacteria1009Open in IMG/M
3300011119|Ga0105246_10712613All Organisms → cellular organisms → Bacteria881Open in IMG/M
3300012011|Ga0120152_1057030All Organisms → cellular organisms → Bacteria1230Open in IMG/M
3300012096|Ga0137389_10287621All Organisms → cellular organisms → Bacteria1389Open in IMG/M
3300012204|Ga0137374_10548844All Organisms → cellular organisms → Bacteria889Open in IMG/M
3300012349|Ga0137387_11014247All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300012350|Ga0137372_10651958All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300012350|Ga0137372_10656083All Organisms → cellular organisms → Bacteria764Open in IMG/M
3300012354|Ga0137366_10717083All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300012375|Ga0134034_1199043All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300012377|Ga0134029_1014470All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300012380|Ga0134047_1083303All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300012383|Ga0134033_1191429All Organisms → cellular organisms → Bacteria840Open in IMG/M
3300012384|Ga0134036_1183542All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300012385|Ga0134023_1189422All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300012385|Ga0134023_1264782All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300012391|Ga0134035_1325712All Organisms → cellular organisms → Bacteria836Open in IMG/M
3300012393|Ga0134052_1007083All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300012393|Ga0134052_1184722All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium1173Open in IMG/M
3300012395|Ga0134044_1224605All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300012395|Ga0134044_1240283All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300012396|Ga0134057_1101629All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300012396|Ga0134057_1155027All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300012397|Ga0134056_1339420All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300012398|Ga0134051_1185505All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.1096Open in IMG/M
3300012398|Ga0134051_1298145All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300012399|Ga0134061_1168933All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300012400|Ga0134048_1221709All Organisms → cellular organisms → Bacteria1080Open in IMG/M
3300012400|Ga0134048_1225576All Organisms → cellular organisms → Bacteria1129Open in IMG/M
3300012400|Ga0134048_1351086All Organisms → cellular organisms → Bacteria1131Open in IMG/M
3300012400|Ga0134048_1366909All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.1102Open in IMG/M
3300012402|Ga0134059_1170671All Organisms → cellular organisms → Bacteria1011Open in IMG/M
3300012403|Ga0134049_1204118All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.1159Open in IMG/M
3300012403|Ga0134049_1341981All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300012405|Ga0134041_1184119All Organisms → cellular organisms → Bacteria1037Open in IMG/M
3300012406|Ga0134053_1337191All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300012407|Ga0134050_1292215All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300012409|Ga0134045_1328927All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300012409|Ga0134045_1478959All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.1104Open in IMG/M
3300012410|Ga0134060_1145888All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium1022Open in IMG/M
3300012410|Ga0134060_1523126All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300012938|Ga0162651_100054025All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300012944|Ga0137410_11666035All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300012957|Ga0164303_10206701All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.1091Open in IMG/M
3300012960|Ga0164301_10003645All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia5416Open in IMG/M
3300012977|Ga0134087_10229150All Organisms → cellular organisms → Bacteria843Open in IMG/M
3300012987|Ga0164307_10789773All Organisms → cellular organisms → Bacteria753Open in IMG/M
3300014487|Ga0182000_10264449All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300014968|Ga0157379_11615905All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300017792|Ga0163161_10819729All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300018028|Ga0184608_10394412All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300018053|Ga0184626_10032940All Organisms → cellular organisms → Bacteria2143Open in IMG/M
3300018061|Ga0184619_10053239All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1764Open in IMG/M
3300018076|Ga0184609_10329714All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300018433|Ga0066667_10450829All Organisms → cellular organisms → Bacteria1051Open in IMG/M
3300019269|Ga0184644_1581998All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300019877|Ga0193722_1118107All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300020022|Ga0193733_1100299All Organisms → cellular organisms → Bacteria808Open in IMG/M
3300020059|Ga0193745_1052157All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium896Open in IMG/M
3300021363|Ga0193699_10395097All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300021951|Ga0222624_1480942All Organisms → cellular organisms → Bacteria1098Open in IMG/M
3300025904|Ga0207647_10324656All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.874Open in IMG/M
3300025928|Ga0207700_10982880All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300025940|Ga0207691_10524273All Organisms → cellular organisms → Bacteria1005Open in IMG/M
3300026078|Ga0207702_11000385All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.829Open in IMG/M
3300026121|Ga0207683_10910887All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.816Open in IMG/M
3300026323|Ga0209472_1119524All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium1033Open in IMG/M
3300026550|Ga0209474_10558974All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300027748|Ga0209689_1308532All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300028379|Ga0268266_10357078All Organisms → cellular organisms → Bacteria1374Open in IMG/M
3300028379|Ga0268266_10964476All Organisms → cellular organisms → Bacteria825Open in IMG/M
3300028381|Ga0268264_10799598All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → environmental samples → uncultured Nocardioides sp.942Open in IMG/M
3300028704|Ga0307321_1051096All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300028707|Ga0307291_1154762All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300028716|Ga0307311_10173916All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300028721|Ga0307315_10152171All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300028787|Ga0307323_10106492All Organisms → cellular organisms → Bacteria1007Open in IMG/M
3300028791|Ga0307290_10226263All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300028796|Ga0307287_10409095All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300028819|Ga0307296_10638501All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300028824|Ga0307310_10067228All Organisms → cellular organisms → Bacteria1531Open in IMG/M
3300028828|Ga0307312_10530258All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300028875|Ga0307289_10427020All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300030905|Ga0308200_1149726All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300030993|Ga0308190_1007529All Organisms → cellular organisms → Bacteria1495Open in IMG/M
3300031058|Ga0308189_10266968All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300031092|Ga0308204_10039407All Organisms → cellular organisms → Bacteria1096Open in IMG/M
3300031093|Ga0308197_10042833All Organisms → cellular organisms → Bacteria1132Open in IMG/M
3300031170|Ga0307498_10165176All Organisms → cellular organisms → Bacteria746Open in IMG/M
3300031200|Ga0307496_10091131All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300031226|Ga0307497_10625451All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300031720|Ga0307469_11632182All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300031996|Ga0308176_12017286All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300034644|Ga0370548_015349All Organisms → cellular organisms → Bacteria1108Open in IMG/M
3300034680|Ga0370541_006488All Organisms → cellular organisms → Bacteria1089Open in IMG/M
3300034680|Ga0370541_007188All Organisms → cellular organisms → Bacteria1051Open in IMG/M
3300034680|Ga0370541_055928All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300034680|Ga0370541_057953All Organisms → cellular organisms → Bacteria519Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil36.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil18.13%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.19%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.68%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.09%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.34%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.34%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.34%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.75%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.17%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil1.17%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.17%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.17%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.17%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.17%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.17%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.17%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.58%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.58%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.58%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.58%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.58%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.58%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.58%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.58%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.58%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.58%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.58%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.58%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.58%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.58%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.58%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.58%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.58%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010087Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010096Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010102Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010104Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010109Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010114Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010115Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010116Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010119Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010120Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010125Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010127Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010130Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010134Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010136Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010139Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010140Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010141Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010145Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010896Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010905Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012011Permafrost microbial communities from Nunavut, Canada - A30_65cm_6MEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012375Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012377Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012380Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012383Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012384Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012385Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012391Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012393Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012395Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012396Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012397Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012398Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012399Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012400Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012402Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012403Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012405Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012406Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012407Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012409Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012410Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012938Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300014487Bulk soil microbial communities from Mexico - Magueyal (Ma) metaGEnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019269Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019877Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300020059Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2EnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300021951Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028704Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379EnvironmentalOpen in IMG/M
3300028707Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148EnvironmentalOpen in IMG/M
3300028716Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198EnvironmentalOpen in IMG/M
3300028721Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300030905Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030993Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031200Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300034644Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034680Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_11063343713300000956SoilLRRRIGVVAAIVLVAAGLCVPAAGAKAHMLVGIQDDAMTLRGNPTFTFRTLKQLRTQIIRVNLNWNDV
Ga0062590_10123140513300004157SoilLPKRIGVIAATALAAVGLCVPAAQAQRHLLVGLQDDAMVLRGDPTFTFRTLKQLRVQIVRVNLNWNDV
Ga0062590_10235657223300004157SoilLRRRIGVAAAIVLVAAGLAVPAAQAKAHMLVGIQDDAMTLRGNPTFTFPTLKQLRTQIVRINLNWNDVAKRR
Ga0062591_10015106333300004643SoilLRRRFGVVAAIVFLAAGLSVPAAQAKNHMLIGMQDDAMTLFGNPTFTFNTLKQLRVQIVRVNLNWNQV
Ga0062594_10124813723300005093SoilLHRRLGVLAAIVFLAAALSVPAAQAKRHMLIGLQDDAMTLFGNPTFTFRTLKQLRVQ
Ga0066677_1053081023300005171SoilLRRHIGVFAAILVFAAALAVPAAQAARHMLVGMQDDAMALRGNPDFTFGTMKQLR
Ga0066684_1108020113300005179SoilLRKRLGVFAAIGFVAAALAVPAAQAARHMLIGMQDDAMALRGNPDFTFGTMKQLRVQ
Ga0066676_1055238723300005186SoilLRRHIGVFAAIFFLAAALSVPAAQAKRHMLIGMQDDAMTLFGNPTFTFNTLKQLRVQVVRVNLNWNQVAKRRPAHPQDPSD
Ga0065705_1064026223300005294Switchgrass RhizosphereLRKRLGVFAAIVVFAAGLSVPAAQAKAHMLVGIQDDAMTLFGDPGFTFRTMKQLRAQIVRVNLNWDKVAK
Ga0070688_10013794933300005365Switchgrass RhizosphereMGVAAAIVLVAAGLAVPAAQAKQHMLVGIQDDAMTLHGNPQFTFSTLKSLRTQIIRINLNWNEVAK
Ga0070703_1037115213300005406Corn, Switchgrass And Miscanthus RhizosphereLRKRLGVFAAIFILAAGLAVPAAQAKRGMLIGIQDDAMVLYGNPTFTFSMLKQLRVQIVRVN
Ga0070705_10119665223300005440Corn, Switchgrass And Miscanthus RhizosphereLAAIVLVAAGLCVPAASAKAHMLVGIQDDALTLHGSPTSTFPTLKQLRAQIIRINLNWNDVAKRRPA
Ga0066681_1019173213300005451SoilLHRRFGVFAAIVFVAAALSVPAAQAKSHMLIGMQDDAMVLSGNPDFTFKTLKQLR
Ga0070685_1149507823300005466Switchgrass RhizosphereLRRRIGVAAAIVLVAAGLAVPAAQAKAHMLVGIQDDAMTLRGNPSFTFPTLKQLRTQIVRLNLNWNEVAKRRPAHPQ
Ga0070706_10139277713300005467Corn, Switchgrass And Miscanthus RhizosphereLRRHLGVFAAIVLLAAGLSVPAAQAKQHMLVGLQDDAMVLYGDPTFTFRTLKELRVQIIRVNLNWDKVA
Ga0070697_10202492723300005536Corn, Switchgrass And Miscanthus RhizosphereLRKRLGVFAAIFILAAGLAVPAAQAKRGMLIGIQDDAMVLYGNPTFTFSMLKQLRVQIVRVNLNWD
Ga0070704_10046360213300005549Corn, Switchgrass And Miscanthus RhizosphereLRRRIGVAAAIVLVAAGLAVPAAQAKQHMLVGIQDDAMTLHGNPQFTFSTLKSLRTQII
Ga0070704_10155190713300005549Corn, Switchgrass And Miscanthus RhizosphereLRKRFGVFAAIFFLAAGLSVPAAQAKNHMLIGMQDDAMTLTGNPDFTFKTLKQLRVQIVRVN
Ga0066695_1079329023300005553SoilLPRRLGVFAAIVLVVAGLSVPAAQAKRHLLVGIQDDSMTLRGNPTFTFGTLKQLRTQIVR
Ga0066695_1079515713300005553SoilLPRRIGVAAAIVFAAAGLCVPVASAKAHMLVGIQDDAMTLHGNPTFTFPILKQLRTQIVR
Ga0066704_1055746313300005557SoilLPRRLGVLAAIVLVAAGLCVPAASAKAHMLVGIQDDALTLHGNPTSTFPTLKQLRTQIIRINLNWND
Ga0066700_1102211113300005559SoilLHRRFGVFAAIVLVAAGLAVPAAQAQRHLLVGIQDDAMTLRGNPTFTFSTLKQLRTQIVR
Ga0066699_1070404223300005561SoilLPRRLGVLAAIVLVAAGLCVPAASAKAHMLVGIQDDALTLHGNPTFTFPTLKQLRTQIIRINLNWN
Ga0068864_10096306523300005618Switchgrass RhizosphereMGVAAAIVLVAEGLAVPAAQAKQHMLVGIQDDAMALHGNPQFTFSTLKSLRTQIIRINLNWNEVAKRRPAHPQDPAD
Ga0066903_10259866323300005764Tropical Forest SoilLHKRIGVFAAIVFLAAALAVPAAQAKNHMLIGMQDDAMTLNGNPTFTFNTLKQLRVQIVRVNLNWNLVAKRR
Ga0066656_1065791813300006034SoilLHRRFGVFAAIVLVAAGLAVPAAQAQRHLLVGIQDDAMTLRGDPTFTFPILKQLRTQI
Ga0097621_10096691113300006237Miscanthus RhizosphereMGVAAAIVLVAAGLAVPAAQAKQHMLVGIQDDAMALHGNPQFTFSTLKSLRTQIIRINLNWNEVAK
Ga0079222_1129464713300006755Agricultural SoilLRKRIGVFAAIFFLAAALAVPAAQAKRHMLIGMQDDAMTLNGNPTFTFNTLKQLR
Ga0066665_1140804523300006796SoilLPRRIGVAAAIVFVAAGLCVPVASAKAHMLVGIQDDAMTLHGNPTFTFPTLKQLRTQIVR
Ga0075436_100004147113300006914Populus RhizosphereLHRRLGVFAAIVLFAASLSVPAAQAKNHMLIGMQDDAMVLSGNPDFTF
Ga0099829_1022227033300009038Vadose Zone SoilLPRRIGVAAAIVFVAAVLCVPAAEAKAHMLIGIQDDAMTLRGDPTFTFPTLKQLRTQIVRINLNWN
Ga0114129_1180837423300009147Populus RhizosphereLPRRLGVFAAILLVVAGLAVPAAQAKRHLLVGIQDDSMTLRGNPTFTFPALKTLRAQIVRINLNWNDVAERRPAHPQDPSDP
Ga0111538_1140104113300009156Populus RhizosphereVATALVAVGLCVPAAQAQRHLLVGIQDDAMVLRGDPTFTFRTLKSLRVQIVRVN
Ga0126307_1162443713300009789Serpentine SoilVAIIFVAAGLSVPAAQSARGMLVGLQDDAMALRGNPTFTFGMMKQLRVQIVR
Ga0126314_1138613523300010042Serpentine SoilVVAIALVAVGLCVPAAQAQRHLLVGLQDDAMVLRGDPTFTFRTLKQLRVQIVRVNLNWNDVAERRP
Ga0126380_1128975423300010043Tropical Forest SoilLRKRFGVFAAIFFLAAGLSVPAAQAKNHMLIGMQDDAMTLTG
Ga0127492_102413323300010087Grasslands SoilLHKRIGVCAAIFFLAAALSVPAAQAKRHMLIGLQDDAMVLAGNPTTTFQTLKQLRVQIVRVNL
Ga0127473_101370413300010096Grasslands SoilLRRHIGVFAAILVFAAALAVPAAQAARYMLIGMQDDAMALRGSPDFTFGTMKQ
Ga0127453_102818113300010102Grasslands SoilLHRRLGVFAAIVLVAAGLAVPAAQAQRHLLVGIQDDAMVLHGNPTFTFSTLKQLRTQIVRINLNW
Ga0127446_101565313300010104Grasslands SoilLAAIVLVAAGFAVPAAQAQRHLLVGIQDDAMVLRGNPQFTFSTLKQLRTQIVRMNLNWPDVAKRRP
Ga0127497_109700513300010109Grasslands SoilLRRRLGVFAAIVLVAAGLAVPAAQAQRHLLVGIQDDAMTLRGNPTFTFPLLKQLRTQIVRINLNW
Ga0127460_109534723300010114Grasslands SoilLHKRIGVCAAIFFLAAALSVPAAQAKRHMLIGLQDDAMVLAGNPTTTFQTLKQLRVQIVRVNLNWNQVAKR
Ga0127495_109211923300010115Grasslands SoilLRRRLGVFAAIVLVAAGLAVPAAQAQRHLLVGIQDDAMTLRGNPTFTFPLLKQLRTQIV
Ga0127466_111610113300010116Grasslands SoilLRRHIGVFAAILVFAAALAVPAAQAARHMLIGMQDDAMALRGSPDFTFGTMKQLRVQVVRINLNWPDVAKRRPAHPQDPADDAYN
Ga0127452_103692823300010119Grasslands SoilLAAIVLVAAGLAVPAAQAQRHLLVGIQDDAMVLRGNPQFTFSTLKQLRTQIVRI
Ga0127451_102608813300010120Grasslands SoilLAAIVLVAAGLAVPAAQAQRHLLVGIQDDAMVLRGNPQFTFSTLKQLRTQIVRMNLNWPD
Ga0127443_104969413300010125Grasslands SoilLRRHIGVFAAIFFLAAGLSVPAAQAKRHMLIGLQDDAMVLFGNPDFTFKTMKQLRVQIVRVNLNW
Ga0127489_106924713300010127Grasslands SoilLHRRIGVFAAIVLIAAGLAVPAAQAQRHLLVGMQDDAMVLSGNPDFTFKTLKQLRVQIVRVNLNWNLVAKRRPAHPQDP
Ga0127489_111337023300010127Grasslands SoilLHRRIGVFAAIVFLAAGLSVPAAQAKRHMLIGIQDDAIVLSGNP
Ga0127489_114591123300010127Grasslands SoilLRRRIGVFAAIFFLAAGLSVPAAQAKRHMLIGLQDDAMVLFGNPDFTF
Ga0127493_106058413300010130Grasslands SoilLRRHIGVFAAILVFAAALAVPAAQAARHMLIGMQDDAMALRGNPDFTFGTMKQLRVQIV
Ga0127493_117177533300010130Grasslands SoilLHRRLGVFAAIVLVAAGLAVPAAQAQRHLLVGIQDDAMVLHGNPTFTFSTLKQLRTQIVRINLNWPDVANKRPAHP
Ga0127484_103162013300010134Grasslands SoilLRRHIGVFAAIFFLAAGLSVPAAQAKRHMLIGLQDDAMVLAGNPTTTFQTLKQLRVQIVRVNLNWNQ
Ga0127447_114689113300010136Grasslands SoilLRRRIGVFAAIFFLAAGLSVPAAQAKRHMLIGMQDDAMVLSGNPTTTFR
Ga0127464_105510423300010139Grasslands SoilLRRHIGVFAAIFFLAAGLSVPAAQAKRHMLIGLQDDAMVLSGNPTFTFNTLKQLRVQIVRVNVNWNQVAKRRP
Ga0127464_109687613300010139Grasslands SoilLRRRIGVFAAIVLVAAGLAVPAAQAQRHLLVGIQDDAMTLRGNPTFTFGTLKQLRVQIVRMNLNWNDVAK
Ga0127456_111972913300010140Grasslands SoilLAAIVLVAAGLAVPAAQAQRHLLVGIQDDAMVLRGNPQFTFSTLKQLRTQIVRINLNWPDVA
Ga0127456_121398623300010140Grasslands SoilLHKRIGVCAAIFFLAAALSVPAAQAKRHMLIGLQDDAMVLSGNPTFTFNTLKQLRVQIV
Ga0127499_113402613300010141Grasslands SoilLAAIVLVAAGFAVPAAQAQRHLLVGIQDDAMVLRGNPQFTFSTLKQLRTQIVRMN
Ga0126321_134849713300010145SoilLPRRIGVALAVVCAAAGLAVPAAQAKAHMLVGIQDDAMTLRGDPTFTFRTLRQLRTQII
Ga0127503_1041068313300010154SoilLRNRIGVAAAIVLIAAGLAVPAAQAKAHMLVGIQDDAMTLHGNPTFTFPTLKQLRTQIVRINLNWND
Ga0134065_1030155313300010326Grasslands SoilLRRHIGVFAAILVFAAALAVPAAQAARGMLIGMQDDAMALRGNPDFTFGTMKQLRVQIVRINLNWPDVAERRP
Ga0134080_1048032613300010333Grasslands SoilLRRRVGVFAAIVLVAAGLAVPAAQAQRHLLVGVQDDAMTLRGNPTFTFSTLKQLRTQIVRINLNWPDVANKRPAHAQDPA
Ga0134080_1051752523300010333Grasslands SoilLPRRIGVAAAIVFVAAVLYVPVAQAKAHMLVGIQDDAMTLHGNPTFTFPTLKQLQRRKRS
Ga0134080_1068905223300010333Grasslands SoilLRRHIGVFAAIFFLAAGLSVPAAQAKRHMLIGLQDDAMVLAGNPTTTFQTLKQLRVQIVRVNLNWN
Ga0126377_1236837623300010362Tropical Forest SoilLRKRFGVFAAIFFLAAGLSVPAAQAKNHMLIGMQDDAMTLTGNPTFT
Ga0126379_1297554113300010366Tropical Forest SoilLPKNIGVFAATVFLAAALAVPAAQAKNHMLVGMQDDAMTLTGNPTFTFNTLKQLRVQIVRVNLN
Ga0134125_1126543323300010371Terrestrial SoilLRRRFGVVAAIVFLAAGLSVPAAQAKNHMLIGMQDDAMTLFGNPTFTFNTLKQLRVQIVRVNLNWNQVAKRRPAHPQDPA
Ga0134128_1125767513300010373Terrestrial SoilLRKRFGVFAAIFFLAAGLSVPAAQAKNHMLIGMQDDAMTLTGNPDFTFKTLKQLRVQIVRVNVNWNQ
Ga0105239_1269882613300010375Corn RhizosphereLRKRFGVFAAIFFLAAGLSVPAAQAKNHMLIGMQDDAMTLTGNPDFTFKTLKQLRVQIVR
Ga0126383_1235683713300010398Tropical Forest SoilLRKHFGVFAAIFFLAAALSVPAAQAKQHMLIGMQDDAMVLSGSPDFTFK
Ga0138111_104440723300010896Grasslands SoilLRRRVGVFAAIFFLAAALSVPAAQAKRHMLIGMQDDAMTLFGNPTFTFNTLKQLRVQIVR
Ga0138112_109330523300010905Grasslands SoilLRRRIGVFAAIFFLAAGLSVPAAQAKRHMLIGMQDDAMVLSGNPTTTFRTLK
Ga0138112_115321413300010905Grasslands SoilLAAIVLVAAGFAVPAAQAQRHLLVGIQDDAMVLRGNPQFTFSTLKQLRTQIVRMNLNWPDVAKRRPKIKKRKESR*
Ga0105246_1071261313300011119Miscanthus RhizosphereMGVAAAIVLVAAGLAVPAAQAKQHMLVGIQDDAMTLHGNPQFTFSTLKSLRTQIIRINLNWNEVAKRR
Ga0120152_105703013300012011PermafrostLPRRIGVAAAIVFVAAGLCVPAASAKAHMLVGIQDDSMTLHGNPTFTFPTLKQLRTQIVRINLN
Ga0137389_1028762123300012096Vadose Zone SoilLVLAAGLAVPAATAARHLLVGIQDDAQTLYGNPTTTFPILRQLRAQIIRINLIWGGCAGRRSPATACGRRPA
Ga0137374_1054884413300012204Vadose Zone SoilLGVFAAIVLLAAGLSVPAAQAKRHMLIGLQDDAMVLFGNPDFTFKTMKQLRVQIVRVNLNWDKVAK
Ga0137387_1101424713300012349Vadose Zone SoilLPRRIGVAAAIVFVAAGLCVPAASAKAHMLVGIQDDAMTLRGNPTFTFPTLKQLRTQIVRINLNWNDVAKRRPAHPQ
Ga0137372_1065195813300012350Vadose Zone SoilMGVFAAALVVAAGLAVPAANAQKHLLVGVQDDAMVLRGDPVFTFGLLKQLRVQIVRINL
Ga0137372_1065608313300012350Vadose Zone SoilMGVLAAALVVAAGLAVPAANAQKHLLVGVQDDAMVLRGDPVFTFGLLKQLRVQIVRINL
Ga0137366_1071708323300012354Vadose Zone SoilMGVFAAALVVAAGLAVPAANAQKHLLVGVQDDAMVPRADPVFPFGLLKQLRVQIVRSNLT
Ga0134034_119904313300012375Grasslands SoilLRRRVGVFAAIVLVAAGLAVPAAQAQRHLLVGIQDDAMTLRGDPTFTFPILKQLRTQ
Ga0134029_101447013300012377Grasslands SoilLRRRIGVFAAIFFLAAGLSVPAAQAKRHMLIGLQDDAMVLAGNPTTTFQTLKQLRVQIVRVNL
Ga0134047_108330313300012380Grasslands SoilLRRRIGVFAAIFFLAAGLSVRAAQAKRHMLIGMQDDAMVLSGNPTTTFRTLKQLRVQ
Ga0134033_119142923300012383Grasslands SoilLRRRVGVFAAIVLVAAGLAVPAAQAQRHLLVGIQDDAMTLRGDPTFTFPILKQLRTQIVRINLNWPDVA
Ga0134036_118354223300012384Grasslands SoilLRRRVGVFAAIVLVAAGLAVPAAQAQRHLLVGIQDDAMTLRGDPTFTFPILKQLRTQIVRINLNWPD
Ga0134023_118942213300012385Grasslands SoilLRRRIGVFAAIFFLAASLSVPAAQAKQHMLVGLQDDAMVLFGNPTFTFKTLKQ
Ga0134023_126478223300012385Grasslands SoilLRKHLGVFAAIFFVAAALSVPAAQAKNHMLIGLQDDAMTLFGTPDVTFKTMKQLRVQIVRVNLN
Ga0134035_132571223300012391Grasslands SoilLAAIVLVAAGLAVPAAQAQRHLLVGIQDDAMVLRGNPQFTFSTLKQLRTQIVRMNLNW
Ga0134052_100708323300012393Grasslands SoilLRRRIGVFAAIVLVAAGLAVPAAQAQRHLLVGIQDDAMVLRGNPQFTFSTLKQLRTQIVRMNLNWPDFAKRRPA
Ga0134052_118472213300012393Grasslands SoilLHKRIGVCAAIFFLAAALSVPAAQAKRHMLIGLQDDAMVLFGNPDFTFKTMKQLRVQIVRVNLNWDKVAKRRPAHPQDPSDPAY
Ga0134044_122460523300012395Grasslands SoilLAAIVLVAAGLAVPAAQAQRHLLVGIQDDAMVLRGNPQFTFSTLKQLRTQI
Ga0134044_124028313300012395Grasslands SoilLAAIVLVAAGFAVPAAQAQRHLLVGIQDDAMVLRGNPQFTFSTLKQLRTQI
Ga0134057_110162923300012396Grasslands SoilLRRRVGVFAAIVLVAAGLAVPAAQAQRHLLVGIQDDAMTLRGDPTFTFPILKQLRTQIVRINLNWPDVADKRPAHP
Ga0134057_115502713300012396Grasslands SoilLHRRLGVFAAIVLVAAGLAVPAAQAQRHLLVGIQDDAMVLHGNPTFTFSTLKQLR
Ga0134056_133942023300012397Grasslands SoilLHKRIGVCAAIFFLAAALSVPAAQAKRHMLIGLQDDAMVLSGNPTFTFNTLKQLLVQIV
Ga0134051_118550513300012398Grasslands SoilLRKRFGVFAAIVLLAAGLSVPAAQAKNHMFIGMQDDAMVLFGNPTFTFNTLKQLRTQIVRVNVNWNQ
Ga0134051_129814523300012398Grasslands SoilLRRHIGVFAAIFFLAAGLSVPAAQAKRHMLIGLQDDAMVLAGNPTTTFQTLKQLRVQIVRVNLNWNQVAK
Ga0134061_116893323300012399Grasslands SoilLPRRIGVAAAIVFVAAGLCVPAASAKAHMLVGIQDDAMTLRGNPTFTFPTLKQLRTQVVRINLNWNDVAKR
Ga0134048_122170923300012400Grasslands SoilLRRRLGVFAAIVLVAAGLAVPAAQAQRHLLVGIQDDAMTLRGDPTFTFPILKQLRTQIV
Ga0134048_122557623300012400Grasslands SoilLRRRIGVFAAIVLVAAGLAVPAAQAQRHLLVGVQDDAMTLRGNPTFTFSTLKQLRTQIVRINLNWPDVAN
Ga0134048_135108613300012400Grasslands SoilLHRRIGVAAAIVLVAAGLAVPAAQAKAHMLVGIQDDAMTLRGNPTFTFGTLKQLRTQIIRINLNWPDVAK
Ga0134048_136690913300012400Grasslands SoilLRKRFGVFAAIVLLAAGLSVPAAQAKNHMFIGMQDDAMVLFGNPTFTFNTLKQLRTQI
Ga0134059_117067123300012402Grasslands SoilLPRRIGVAAAIVLVAAGLAVPAASAKAHMLVGIQDDAMTLRGNPAFTFPTLKQLRTQIVRINLNW
Ga0134049_120411813300012403Grasslands SoilLRKRFGVFAAIVLLAAGLSVPAAQAKNHMFIGMQDDAMVLFGNPTFTFNTLKQLRTQIVRVNVNWNQVAKRRPAHPQ
Ga0134049_134198113300012403Grasslands SoilLHKRIGVCAAIFFLAAALSVPAAQAKRHMLIGLQDDAMVLSGNPTFT
Ga0134041_118411913300012405Grasslands SoilLRRRVGVFAAIVLVAAGLAVPAAQAQRHLLVGIQDDAMTLRGDPTFTFPILKQLRTQIVRINLNWPDV
Ga0134053_133719123300012406Grasslands SoilLRRRLGVFAAIVLIAAGLAVPAAQAQRHLLVGIQDDAMTLKGNPTFTFSTLKQLRT
Ga0134050_129221523300012407Grasslands SoilLRKRFGVFAAIVLLAAGLSVPAAQAKNHMFIGMQDDAMVLFGNPTFTFNTLKQLRTQIVRVNVNWN
Ga0134045_132892713300012409Grasslands SoilLRKRIGVFAAIALLAAGLSAPAAQAKRHMLIGLQDDAMVLFGNPDFTFKTMKQLRVQIVRVNLNWDK
Ga0134045_147895913300012409Grasslands SoilLRKRFGVFAAIVLLAAGLSVPAAQAKNHMFIGMQDDAMVLFGNPTFTFNTLKQLRTQIV
Ga0134060_114588813300012410Grasslands SoilLHKRIGVCAAIFFLAAALSVPAAQAKRHMLIGLQDDAMVLSGNPTFTFNTLKQLRVQIVRVNVNWNQVAKR
Ga0134060_152312623300012410Grasslands SoilLRRRLGVFAAIVLVAAGLAVPAAQAQRHLLVGIQDDAMTLRGDPTFTFPILKQLRTQIVRINLNWPDVADKRPAHP
Ga0162651_10005402523300012938SoilLRKRIGVFAAIVLLAAGLSVPAAQAKRHMLIGLQDDAMVLFGNPDFTFKTMKQLRVQIVRVNVNWDKVAKRRPAHPQ
Ga0137410_1166603523300012944Vadose Zone SoilLPRRIGVAAAIVFVAAGLCVPVASAKAHMLVGIQDDAMTLHGNPTFTFPTLKQLRTQIVRINLNWNDVAKRRPAHPQDPADP
Ga0164303_1020670123300012957SoilLRRRIGVAAAIVLVAAGLAVPAAQAKQHMLVGLQDDAMTLHGNPQFTFSTLKSLRTQIVRINLNW
Ga0164301_1000364573300012960SoilLRRRIGVAAAIVLVAAGLAVPAAQAKQHMLVGIQDAAMTLHGNPQFTFSTLKSLRTQIIR
Ga0134087_1022915013300012977Grasslands SoilLRRHIGVFAAILVFAAALAVPAAQAARHMLIGMQDDAMALRGSPDFTFGTMKQLRVQVV
Ga0164307_1078977323300012987SoilLRRRIGVAAAIVLVAAGLAVPAAQAKQHMLVGIQDDAMTLHGNPQFTFSTLKSLRTQIIRINLNWNEVAKRRPAHPQDPADPA
Ga0182000_1026444913300014487SoilLRNKIWLVAAIVLLAAGLSVPAAQAKRGMLIGMQDDAMTLFGNPDFTFRTLKQLRVQIVRVNLNWNQ
Ga0157379_1161590523300014968Switchgrass RhizosphereMGVAAAIVLVAAGLAVPAAQAKQHMLVGIQDDAMTLHGNPQFTFSTLKSLRTQIIRI
Ga0163161_1081972923300017792Switchgrass RhizosphereMGVAAAIVLVAAGLAVPAAQAKQHMLVGIQDDAMTLHGNPQFTFSTLKSLRTQIIRINLNWNEVAKRRPAHPQDP
Ga0184608_1039441223300018028Groundwater SedimentLFRRIGVAAAIVLVAAGLAVPAAQAKAHMLVGIQDDAMTLRGNPTFTFPTLKQLRTQIVRINLN
Ga0184626_1003294013300018053Groundwater SedimentMKDCAGCFPASGGSRSLPRRIGVFVAIVLVAAGLSVPAAQSARGMLVGLQDDAMVLRGNPTFTFGMMKQLRVQIVRINLNWNDVAKRRPAHPQDPADP
Ga0184619_1005323913300018061Groundwater SedimentLRKRIGVFAAIALLAAALSVPAAQAKRHMLIGLQDDAMVLFGNPDFTFK
Ga0184609_1032971413300018076Groundwater SedimentLHRRIGVAAAIVLVAAGLAVPAAQAKAHMLVGIQDDAMTLRGNPTFTFATLKQLRAQIIRINLNWNDVAKRRPAHGQ
Ga0066667_1045082923300018433Grasslands SoilLHRRFGVFAAIVLVAAGLAVPAAQAKAHMLVGIQDDSMTLHGNPTFTFPTLKQLRTQIVRINLNWNDVAKR
Ga0184644_158199823300019269Groundwater SedimentLRRRIGVAAAIVLVAAGLAVPAAQAKQHMLVGIQDDAMTLHGNPQFTFSTMKSLRAQIIRINLNWNEVAKRRP
Ga0193722_111810713300019877SoilLLRRIGVAAAIVIVAAGLAVPAAQAKAHMLVGIQDDSMTLRGNPTFTFTTLKQLRTQIVR
Ga0193733_110029923300020022SoilLLRRIGVAAAIVLVAAGLAVPAASAKAHMLVGIQDDSMTLRGNPTFTFSTLKQLRTQIVRINLNW
Ga0193745_105215723300020059SoilLRRRIGVAAAIVLVAAGLAVPAAQAKQHMLVGIQDDAMTLHGNPQFTFSTLKSLRTQIIRINLNWNEVAKRRP
Ga0193699_1039509713300021363SoilLLRRIGVAAAIVLVAAGLAVPAAQAKAHMLVGIQDDSMTLRGNPTFTFSTLKQLRAQIIRINLNWNDVAKRRPAHGQDPAD
Ga0222624_148094213300021951Groundwater SedimentLRRRIGVAAAIVLVAAGLAVPAAQAKQHMLVGIQDDAMTLHGNPQFTFSTMKSLRAQIIR
Ga0207647_1032465613300025904Corn RhizosphereMGVAAAIVLVAAGLAVPAAQAKQHMLVGIQDDAMALHGNPQFTFSTLKSLRTQIIRINLN
Ga0207700_1098288023300025928Corn, Switchgrass And Miscanthus RhizosphereLRRRIGVAAAIVLVAAGLAVPAAQAKQHMLVGIQDDAMALHGNPQFTFSTLKSLRTQIIRINLNWNEVAKRRPAHPQDP
Ga0207691_1052427323300025940Miscanthus RhizosphereLRRRIGVAAAIVLVAAGLAVPAAQAKAHMLVGIQDDAMTLRGNPSFTFPTLKQLRTQIV
Ga0207702_1100038513300026078Corn RhizosphereMGVAAAIVLVAAGLAVPAAQAKQHMLVGIQDDAMALHGNPQFTFSTLKSLRTQIIRINLNWNE
Ga0207683_1091088723300026121Miscanthus RhizosphereMGVAAAIVLVAAGLAVPAAQAKQHMLVGIQDDAMALHGNPQFTFSTLKSLRTQIIRINLNWNEVAKRR
Ga0209472_111952423300026323SoilLHRRFGVFAAIVFVAAALSVPAAQAKSHMLIGMQDDAMVLSGNPDFTFKT
Ga0209474_1055897413300026550SoilLRRHIGVFAAIVFFAAALAVPAAQAQRHLLVGMQDDAMALRGSPDFTFGTMKQLRVQIVR
Ga0209689_130853223300027748SoilLRRHIGVFAAILVFAAALAVPAAQAARHMLVGMQDDAMALRGNPDFTFGTMKQLRVQIVRINLNWPDVAKRRPAHPQ
Ga0268266_1035707813300028379Switchgrass RhizosphereMGVAAAIVLVAAGLAVPAAQAKQHMLVGIQDDAMTLHGNPQFTFSTLKSLRTQIIRINLNWNEVAKRRPAHPQD
Ga0268266_1096447613300028379Switchgrass RhizosphereLRRRIGVAAAIVLVAAGLAVPAAQAKAHMLVGIQDDAMTLRGNPSFTFPTLKQLRTQIVRLNLNWNEVAKRRPAHPHGCP
Ga0268264_1079959823300028381Switchgrass RhizosphereMGVAAAIVLVAAGLAVPAAQAKQHMLVGIQDDAMALHGNPQFTFSTLKSLRTQIIR
Ga0307321_105109613300028704SoilLRRRIGVAAAIVLVAAGLAVPAAQAKQHMLVGIQDDAMTLHGNPQFTFSTMKSLRAQIIRINLNWNEVAKR
Ga0307291_115476213300028707SoilLRRRIGVAAAIVLVAAGLAVPAAQAKQHMLVGIQDDAMTLHGNPQFTFSTMKSLRAQIIRINLNWNEV
Ga0307311_1017391613300028716SoilLRRRIGVAAAIVLVAAGLAVPAAQAKQHMLVGIQDDAMALHGNPQFTFSTLKSLRTQIIRINLNWNEVA
Ga0307315_1015217123300028721SoilLLRRIGVVSAIVLVAVGLAVPAAQAKTHMLVGLQDDAMTLRGNPTFTFNTLKQLRVQIVRINLNWPDVAKRRP
Ga0307323_1010649213300028787SoilLLRRIGVVSAIVLVAVGLAVPAAQAKTHMLVGLQDDAMTLRGNPTFTFNTLKQLRVQ
Ga0307290_1022626323300028791SoilLPRRIGVAAAIVFVAAGLCVPAASAKAHMLVGIQDDAMTLRGNPTLTFQTLKQLRTQIVR
Ga0307287_1040909523300028796SoilLRKRIGVFAAIVLLAAGLSVPAAQAKRHMLIGLQDDAMVLFGNPDFTFKTMKQLRVQIVRVNVN
Ga0307296_1063850113300028819SoilLPRRIGVAAAIVFVAAGLCVPAASAKAHMLVGIQDDAMTLRGNPTFTFQTLKQLRTQIVRINLNWNDVAKKRPTHGQDP
Ga0307310_1006722833300028824SoilLLRRIGVVSAIVLVAVGLAVPAAQAKTHMLVGLQDDAMTLRGNPTFTFNTLKQLRVQIVRINLNWPDVAKRRPVH
Ga0307312_1053025823300028828SoilLFRRIGVAAAIVLVAAGLAVPAAQAKAHMLVGIQDDAMTLRGNPTFTFSTLKQLRT
Ga0307289_1042702013300028875SoilLPRRIGVAAAIVFVAAGLYVPAASAKAHMLVGIQDDAMTLRGNPTLTFQTLKQLRTQIVR
Ga0308200_114972623300030905SoilLRRRIGVAAAIVLVAAGLAVPAAQAKQHMLVGIQDDAMALHGNPQFTFSTLKSLRTQIIRINLNWNEVAKRRPA
Ga0308190_100752933300030993SoilLRKRFGVFAAIVLLAAGLSVPAAQAKQHMLVGMQDDAMTLRGNPTFTFNMLKQLRVQIVRINLNWPDVAKRRPVH
Ga0308189_1026696823300031058SoilLRRRIGVAAAIVLVAAGLAVPAAQAKQHMLVGIQDDAMTLHGNPQFTFSTMKSLRAQIIRINLNWNEVAKRRPAHPQ
Ga0308204_1003940713300031092SoilLRRRIGVAAAIVLVAAGLAVPAAQAKQHMLVGIQDDAMTLHGNPQFTFSTMKSLRAQII
Ga0308197_1004283313300031093SoilLPRRIGVAAAIVFVAAGLCVPAASAKAHMLVGIQDDAMTLRGNPTFTFPTLKQLRTQIVRINLNWNDVAK
Ga0307498_1016517613300031170SoilMGVAAAIVLVAAGLAVPAAQAKQHMLVGIQDDAMTLHGNPQFTFSTLKSLRTQIVRINLNWNEVAKRRPAHPQDPADP
Ga0307496_1009113113300031200SoilLRRRIGVAAAIVLVAAGLAVPAAQAKQHMLVGIQDDAMALHGNPQFTFSTLKSLRTQIIR
Ga0307497_1062545123300031226SoilLLRRIGVAAAIVLVAAGLAVPAAQAKAHMLVGIQDDAMTLRGNPSFTFPTLKQLRTQIVRINLNWNEVAKRRPAHPQDPADP
Ga0307469_1163218223300031720Hardwood Forest SoilLRRRIGVAAAIVLVAAGLAVPAAEAKQHMLVGIQDDAMALHGNPQFTFSTLKSLRTQ
Ga0308176_1201728623300031996SoilLHKRFGVFAAIFFLAAALSVPAAQAKRHMLIGLQDDAMVLFGNPTFTFNTLKQLRVQIVRVNLNWNQVAK
Ga0370548_015349_2_1993300034644SoilLRRRIGVFAAILLVAAGLCVPAASAKAHMLIGIQDDSMTLHGNPQFTFSTMKQLRTQIVRINLNWN
Ga0370541_006488_3_2033300034680SoilLPRRIGVAAAIVFVAAGLCVPAASAKAHMLVDIQDDAMTLRGNPTFTFPTLKQLRTQIVRINLNWND
Ga0370541_007188_842_10513300034680SoilLRKRIGVFAAIALLAAALSVPAAQAKRHMLIGLQDDAMVLFGNPDFTFRTFKQLRVQIVRVNLNWDKVAK
Ga0370541_055928_345_5243300034680SoilLFRRIGVAAAIVLVAAGLAVPAAQAKAHMLVGLQDDAMTLRGNPTFTFGTLKQLRTQIVR
Ga0370541_057953_1_1983300034680SoilLRKRIGVFAAIALLAAALSVPAAQAKRHMLIGLQDDAMVLFGNPDFTFKTMKQLRVQIVRVNLNRD

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.