NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F034512

Metagenome / Metatranscriptome Family F034512

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F034512
Family Type Metagenome / Metatranscriptome
Number of Sequences 174
Average Sequence Length 52 residues
Representative Sequence DFVCAGALLNAINRVESQRKSVQIFGASPIIRALLLLIGISPRHFVKKPQ
Number of Associated Samples 156
Number of Associated Scaffolds 174

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 98.28 %
% of genes from short scaffolds (< 2000 bps) 97.13 %
Associated GOLD sequencing projects 151
AlphaFold2 3D model prediction Yes
3D model pTM-score0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (57.471 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(7.471 % of family members)
Environment Ontology (ENVO) Unclassified
(39.655 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(41.954 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 37.18%    β-sheet: 2.56%    Coil/Unstructured: 60.26%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 174 Family Scaffolds
PF00227Proteasome 82.76
PF01494FAD_binding_3 7.47
PF01266DAO 2.30
PF13098Thioredoxin_2 1.72
PF13421Band_7_1 0.57
PF07885Ion_trans_2 0.57
PF00254FKBP_C 0.57
PF00004AAA 0.57
PF03992ABM 0.57
PF13450NAD_binding_8 0.57
PF08352oligo_HPY 0.57

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 174 Family Scaffolds
COG063820S proteasome, alpha and beta subunitsPosttranslational modification, protein turnover, chaperones [O] 82.76
COG3484Predicted proteasome-type proteasePosttranslational modification, protein turnover, chaperones [O] 82.76
COG5405ATP-dependent protease HslVU (ClpYQ), peptidase subunitPosttranslational modification, protein turnover, chaperones [O] 82.76
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 14.94
COG0578Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 7.47
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 7.47
COG0665Glycine/D-amino acid oxidase (deaminating)Amino acid transport and metabolism [E] 7.47


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms72.99 %
UnclassifiedrootN/A27.01 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459008|GA8OVOZ02HMYHXAll Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria504Open in IMG/M
2170459010|GIO7OMY02F146RAll Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium516Open in IMG/M
3300001213|JGIcombinedJ13530_107899490All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri547Open in IMG/M
3300004079|Ga0055514_10119810All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria682Open in IMG/M
3300004091|Ga0062387_100812840All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales698Open in IMG/M
3300004145|Ga0055489_10310030All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales507Open in IMG/M
3300004479|Ga0062595_101604146All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria607Open in IMG/M
3300005163|Ga0066823_10064784All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria689Open in IMG/M
3300005208|Ga0069003_10052010All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria699Open in IMG/M
3300005293|Ga0065715_10605940All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales685Open in IMG/M
3300005328|Ga0070676_10441769All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria913Open in IMG/M
3300005329|Ga0070683_101385746Not Available676Open in IMG/M
3300005330|Ga0070690_100968357All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri669Open in IMG/M
3300005344|Ga0070661_101153900All Organisms → cellular organisms → Bacteria → Proteobacteria647Open in IMG/M
3300005353|Ga0070669_101354284All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria617Open in IMG/M
3300005366|Ga0070659_100433525All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1113Open in IMG/M
3300005438|Ga0070701_10234464All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1101Open in IMG/M
3300005446|Ga0066686_10152788All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1527Open in IMG/M
3300005468|Ga0070707_101170847All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria735Open in IMG/M
3300005487|Ga0074211_115733All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales813Open in IMG/M
3300005539|Ga0068853_100364997All Organisms → cellular organisms → Bacteria → Proteobacteria1346Open in IMG/M
3300005543|Ga0070672_100166898All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1829Open in IMG/M
3300005548|Ga0070665_101851383All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales610Open in IMG/M
3300005548|Ga0070665_101999606All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria585Open in IMG/M
3300005560|Ga0066670_10791488Not Available575Open in IMG/M
3300005576|Ga0066708_10488327Not Available793Open in IMG/M
3300005617|Ga0068859_100508482All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1300Open in IMG/M
3300005617|Ga0068859_100791783All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1036Open in IMG/M
3300005618|Ga0068864_101914390All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria599Open in IMG/M
3300005719|Ga0068861_101131893All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria754Open in IMG/M
3300005995|Ga0066790_10158366All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria969Open in IMG/M
3300006046|Ga0066652_100423261All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1219Open in IMG/M
3300006049|Ga0075417_10761412All Organisms → cellular organisms → Bacteria → Proteobacteria500Open in IMG/M
3300006796|Ga0066665_11037903All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri627Open in IMG/M
3300006797|Ga0066659_11442619All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria575Open in IMG/M
3300006844|Ga0075428_102242533All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales563Open in IMG/M
3300006852|Ga0075433_11231726All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria649Open in IMG/M
3300006881|Ga0068865_100853323All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria789Open in IMG/M
3300006914|Ga0075436_101309539All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300006918|Ga0079216_10880604All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria672Open in IMG/M
3300009147|Ga0114129_10317452All Organisms → cellular organisms → Bacteria2072Open in IMG/M
3300009147|Ga0114129_11478249Not Available836Open in IMG/M
3300009147|Ga0114129_12700217All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300009148|Ga0105243_13042604All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium508Open in IMG/M
3300009162|Ga0075423_10671645All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1093Open in IMG/M
3300009171|Ga0105101_10563130Not Available563Open in IMG/M
3300009179|Ga0115028_11322903Not Available601Open in IMG/M
3300009553|Ga0105249_11101069Not Available864Open in IMG/M
3300010333|Ga0134080_10474425All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri590Open in IMG/M
3300010867|Ga0126347_1382893All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria577Open in IMG/M
3300011991|Ga0120153_1058809All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium684Open in IMG/M
3300011996|Ga0120156_1038740Not Available873Open in IMG/M
3300012203|Ga0137399_11514940All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria558Open in IMG/M
3300012210|Ga0137378_11207795All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria672Open in IMG/M
3300012357|Ga0137384_11110980All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria633Open in IMG/M
3300012362|Ga0137361_11676329All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri556Open in IMG/M
3300012483|Ga0157337_1032717Not Available540Open in IMG/M
3300012532|Ga0137373_10292144All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1299Open in IMG/M
3300012681|Ga0136613_10246002All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1001Open in IMG/M
3300012910|Ga0157308_10412849Not Available527Open in IMG/M
3300012955|Ga0164298_11085065All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri598Open in IMG/M
3300012958|Ga0164299_11700192All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria501Open in IMG/M
3300012961|Ga0164302_11438954All Organisms → cellular organisms → Bacteria → Proteobacteria565Open in IMG/M
3300012971|Ga0126369_12303491Not Available625Open in IMG/M
3300012989|Ga0164305_11771135All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri557Open in IMG/M
3300013104|Ga0157370_11042840Not Available740Open in IMG/M
3300013297|Ga0157378_10812733Not Available961Open in IMG/M
3300013306|Ga0163162_11174188Not Available871Open in IMG/M
3300013307|Ga0157372_11186170All Organisms → cellular organisms → Bacteria → Proteobacteria882Open in IMG/M
3300013308|Ga0157375_10071036All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3493Open in IMG/M
3300014308|Ga0075354_1032101All Organisms → cellular organisms → Bacteria → Proteobacteria897Open in IMG/M
3300014324|Ga0075352_1174048Not Available620Open in IMG/M
3300014885|Ga0180063_1276394Not Available534Open in IMG/M
3300015193|Ga0167668_1099148All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria540Open in IMG/M
3300015254|Ga0180089_1139275All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria506Open in IMG/M
3300015360|Ga0163144_11416852All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri617Open in IMG/M
3300015371|Ga0132258_10215014All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria4673Open in IMG/M
3300015374|Ga0132255_104394234Not Available598Open in IMG/M
3300016270|Ga0182036_10571920Not Available903Open in IMG/M
3300016319|Ga0182033_10149181All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1802Open in IMG/M
3300016404|Ga0182037_11478209Not Available602Open in IMG/M
3300016445|Ga0182038_10538658All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1001Open in IMG/M
3300017654|Ga0134069_1366631All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium519Open in IMG/M
3300017657|Ga0134074_1250907All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri637Open in IMG/M
3300018060|Ga0187765_10536904Not Available746Open in IMG/M
3300018072|Ga0184635_10041721All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1755Open in IMG/M
3300018075|Ga0184632_10187029Not Available913Open in IMG/M
3300018078|Ga0184612_10617793All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium512Open in IMG/M
3300018476|Ga0190274_11921685All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300018481|Ga0190271_12542424All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium614Open in IMG/M
3300019362|Ga0173479_10428897All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri646Open in IMG/M
3300019886|Ga0193727_1038354All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1601Open in IMG/M
3300019888|Ga0193751_1061675All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1565Open in IMG/M
3300019888|Ga0193751_1087891All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1224Open in IMG/M
3300021418|Ga0193695_1053018Not Available881Open in IMG/M
3300022534|Ga0224452_1017735All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1951Open in IMG/M
3300025315|Ga0207697_10100398All Organisms → cellular organisms → Bacteria → Proteobacteria1233Open in IMG/M
3300025901|Ga0207688_10427421Not Available824Open in IMG/M
3300025914|Ga0207671_10932113Not Available686Open in IMG/M
3300025917|Ga0207660_10672144Not Available845Open in IMG/M
3300025919|Ga0207657_10193082All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1642Open in IMG/M
3300025919|Ga0207657_10331831All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1201Open in IMG/M
3300025919|Ga0207657_11463472Not Available511Open in IMG/M
3300025919|Ga0207657_11490852All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri506Open in IMG/M
3300025920|Ga0207649_10044369All Organisms → cellular organisms → Bacteria → Proteobacteria2721Open in IMG/M
3300025923|Ga0207681_11759727Not Available517Open in IMG/M
3300025923|Ga0207681_11860357All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria502Open in IMG/M
3300025924|Ga0207694_10950716Not Available727Open in IMG/M
3300025926|Ga0207659_11030684Not Available708Open in IMG/M
3300025928|Ga0207700_11940261All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria515Open in IMG/M
3300025931|Ga0207644_10788468Not Available794Open in IMG/M
3300025937|Ga0207669_11204594All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri641Open in IMG/M
3300025941|Ga0207711_10586710All Organisms → cellular organisms → Bacteria → Proteobacteria1040Open in IMG/M
3300025941|Ga0207711_10830775Not Available860Open in IMG/M
3300025949|Ga0207667_11135604Not Available763Open in IMG/M
3300025949|Ga0207667_11805914All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri575Open in IMG/M
3300025960|Ga0207651_10606959All Organisms → cellular organisms → Bacteria → Proteobacteria957Open in IMG/M
3300025961|Ga0207712_10341151All Organisms → cellular organisms → Bacteria1242Open in IMG/M
3300025961|Ga0207712_10696144All Organisms → cellular organisms → Bacteria → Proteobacteria886Open in IMG/M
3300025966|Ga0210105_1007750All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales1541Open in IMG/M
3300025981|Ga0207640_10367216All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1162Open in IMG/M
3300025981|Ga0207640_11048763Not Available719Open in IMG/M
3300025981|Ga0207640_11087232All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri707Open in IMG/M
3300027695|Ga0209966_1051118All Organisms → cellular organisms → Bacteria → Proteobacteria879Open in IMG/M
3300027739|Ga0209575_10287506Not Available569Open in IMG/M
3300027765|Ga0209073_10004943All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3245Open in IMG/M
3300027840|Ga0209683_10060102All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1678Open in IMG/M
3300027871|Ga0209397_10506656All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri600Open in IMG/M
3300027873|Ga0209814_10548631All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium514Open in IMG/M
3300027899|Ga0209668_10603125Not Available734Open in IMG/M
3300027902|Ga0209048_11029081All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium524Open in IMG/M
3300027979|Ga0209705_10276528Not Available861Open in IMG/M
3300028381|Ga0268264_10694350All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1010Open in IMG/M
3300028381|Ga0268264_11166605All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri779Open in IMG/M
3300028587|Ga0247828_10611625Not Available666Open in IMG/M
3300028596|Ga0247821_10666270All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria676Open in IMG/M
3300028651|Ga0302171_10112818All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium656Open in IMG/M
3300028732|Ga0302264_1066869All Organisms → cellular organisms → Bacteria → Proteobacteria843Open in IMG/M
3300028733|Ga0302261_1036686All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1144Open in IMG/M
3300028770|Ga0302258_1094752All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri721Open in IMG/M
3300030001|Ga0302272_1110712All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri762Open in IMG/M
3300030048|Ga0302273_1110584All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri812Open in IMG/M
3300030294|Ga0311349_10979959All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri793Open in IMG/M
(restricted) 3300031150|Ga0255311_1105396All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri612Open in IMG/M
3300031521|Ga0311364_11224569Not Available745Open in IMG/M
3300031562|Ga0310886_10965732Not Available544Open in IMG/M
3300031720|Ga0307469_10311736All Organisms → cellular organisms → Bacteria → Proteobacteria1302Open in IMG/M
3300031720|Ga0307469_12421461All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria513Open in IMG/M
3300031722|Ga0311351_11417278All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300031726|Ga0302321_103085992All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium543Open in IMG/M
3300031740|Ga0307468_100477847Not Available980Open in IMG/M
3300031768|Ga0318509_10721481All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri553Open in IMG/M
3300031846|Ga0318512_10244296All Organisms → cellular organisms → Bacteria885Open in IMG/M
3300031901|Ga0307406_11007969Not Available715Open in IMG/M
3300031918|Ga0311367_11252816Not Available734Open in IMG/M
3300031997|Ga0315278_12059299All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri531Open in IMG/M
3300032002|Ga0307416_100297329All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1602Open in IMG/M
3300032002|Ga0307416_102689608All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri594Open in IMG/M
3300032075|Ga0310890_10334039All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1102Open in IMG/M
3300032075|Ga0310890_11425843All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300032143|Ga0315292_11686084Not Available509Open in IMG/M
3300032164|Ga0315283_11237251Not Available777Open in IMG/M
3300032177|Ga0315276_11877156All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri614Open in IMG/M
3300032897|Ga0335071_10324813All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1492Open in IMG/M
3300033233|Ga0334722_11063188Not Available569Open in IMG/M
3300033412|Ga0310810_10246777All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1968Open in IMG/M
3300033413|Ga0316603_10537515Not Available1077Open in IMG/M
3300033414|Ga0316619_12238668All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium501Open in IMG/M
3300033419|Ga0316601_100347721All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales1376Open in IMG/M
3300033433|Ga0326726_11104613Not Available771Open in IMG/M
3300033521|Ga0316616_100800703All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales1147Open in IMG/M
3300034354|Ga0364943_0421852All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri518Open in IMG/M
3300034358|Ga0370485_0082664All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria896Open in IMG/M
3300034417|Ga0364941_093444All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Steinernematidae → Steinernema → Steinernema glaseri718Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.47%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen5.17%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.17%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.02%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere4.02%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.45%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.45%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.45%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment2.87%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.87%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.87%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.30%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.30%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.30%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.72%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.72%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.72%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.72%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.72%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.15%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland1.15%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment1.15%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.15%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.15%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.15%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil1.15%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.15%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.15%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.15%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog1.15%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.15%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.15%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.15%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.15%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.15%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.15%
SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Sediment0.57%
Freshwater Microbial MatEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat0.57%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.57%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment0.57%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.57%
FreshwaterEnvironmental → Aquatic → Freshwater → Pond → Sediment → Freshwater0.57%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.57%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.57%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.57%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.57%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.57%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.57%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.57%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.57%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.57%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.57%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.57%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.57%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.57%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.57%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.57%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.57%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.57%

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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459008Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect DNA Tissue lysis 0-10cmEnvironmentalOpen in IMG/M
2170459010Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)EnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300004079Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleC_D2EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004145Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005163Soil and rhizosphere microbial communities from Laval, Canada - mgHMBEnvironmentalOpen in IMG/M
3300005208Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D2EnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005487Sediment microbial communities from Lake Washington, Seattle, Washington, USA - Methanol enrichmentEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005995Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009171Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009179Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1EnvironmentalOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010867Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011991Permafrost microbial communities from Nunavut, Canada - A34_65cm_12MEnvironmentalOpen in IMG/M
3300011996Permafrost microbial communities from Nunavut, Canada - A39_65cm_12MEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012483Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.yng.040610Host-AssociatedOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012681Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)EnvironmentalOpen in IMG/M
3300012910Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014308Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1EnvironmentalOpen in IMG/M
3300014324Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1EnvironmentalOpen in IMG/M
3300014885Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10DEnvironmentalOpen in IMG/M
3300015193Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)EnvironmentalOpen in IMG/M
3300015254Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10DEnvironmentalOpen in IMG/M
3300015360Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300021418Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2EnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025966Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027695Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027739Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Medium cellulose week 11 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027840Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027871Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027899Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)EnvironmentalOpen in IMG/M
3300027902Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)EnvironmentalOpen in IMG/M
3300027979Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028596Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14EnvironmentalOpen in IMG/M
3300028651Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_2EnvironmentalOpen in IMG/M
3300028732Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_4EnvironmentalOpen in IMG/M
3300028733Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E2_4EnvironmentalOpen in IMG/M
3300028770Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_4EnvironmentalOpen in IMG/M
3300030001Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N1_2EnvironmentalOpen in IMG/M
3300030048Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N1_3EnvironmentalOpen in IMG/M
3300030294II_Fen_E3 coassemblyEnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031521III_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031722II_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300031726Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031918III_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300031997Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032143Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0EnvironmentalOpen in IMG/M
3300032164Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0EnvironmentalOpen in IMG/M
3300032177Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M
3300033233Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottomEnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033413Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCTEnvironmentalOpen in IMG/M
3300033414Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_BEnvironmentalOpen in IMG/M
3300033419Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCTEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300034354Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17EnvironmentalOpen in IMG/M
3300034358Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_16EnvironmentalOpen in IMG/M
3300034417Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
F48_083308802170459008Grass SoilMTAVDRVDFVCAGALLNLITRVETQRKAVQIIGASPIIRAMLLLIGISPRHFVKKRE
F62_059200202170459010Grass SoilVDRIDFVCAGALLNAIYRVESQRKAVQIAGASPIIRALLLLIGISPRHFLKKAT
JGIcombinedJ13530_10789949013300001213WetlandWVCAGALLNAIHRIEATGKTVQIAGATPIIRALLLLIGIPYQQFVRKIT*
Ga0055514_1011981023300004079Natural And Restored WetlandsRIDFVCAGSLLNAINRVESQRKAVQITGASPIIRALLLLIGISPRHFLKRAT*
Ga0062387_10081284013300004091Bog Forest SoilPIDLSAVDRIDFVCAGAILNAIIRSESQRKTVQIAGASPIIRALLLLIGISPRHFIKKTQ
Ga0055489_1031003013300004145Natural And Restored WetlandsRVDFVGAGAVFNAIKTLEQQGKAVQIVGATPIVRAMLLLIGVPSGHFYKKSSP*
Ga0062595_10160414613300004479SoilMSEVERIDFVCAGAFLNVINRIELQRKTVQIVGASPIIRALLLLIGVSPRHFVKKPQ*
Ga0066823_1006478413300005163SoilSIVPIDMTTVDRIDFVCAGSLLNAIYRVESQRKAVQIVGASPIIRALLLLIGISPRHFLKKAT*
Ga0069003_1005201023300005208Natural And Restored WetlandsAVDRIDFVCAGSLLNAINRVESQRKAVQITGASPIIRALLLLIGISPRHFLKRAP*
Ga0065715_1060594023300005293Miscanthus RhizosphereDMTAVDRIDFVCAGSLLNAINRIEHQRKAVQIIGASPIIRALLLLIGISPRHFLKRAT*
Ga0070676_1044176913300005328Miscanthus RhizosphereVDRMDFVCAGAFLNALGRVESQRKSVQIVGASPIVRALLLLIGVSPRNFVKKTP*
Ga0070683_10138574613300005329Corn RhizosphereVCAGAMLNAINRIEGQRKSVQISGASPIIRALLLLIGVSPRHFVRKAA*
Ga0070690_10096835723300005330Switchgrass RhizosphereAGALLNLIGRIESQHKSVQIVGASPIIRALLLLIGVSPRHFVKKPQ*
Ga0070661_10115390023300005344Corn RhizosphereRIDFIFAGALFNAISRIETQGKAVQITGATPIVRALLLLIGISPRHFVKKVD*
Ga0070669_10135428413300005353Switchgrass RhizosphereEVERIDFVCAGAFLNHITRIEAQRKAVQIVGVTPIVRALLLLLGVSPRHFVKKAE*
Ga0070659_10043352513300005366Corn RhizosphereIGIDMSAIDRIDFVCAGAMLNTITRIEGQRKSVQIAGASPIIRALLLLIGISPRHFVRKSS*
Ga0070701_1023446413300005438Corn, Switchgrass And Miscanthus RhizosphereSEVERVDFVCAGALLNVISRIELQHKSVQLVGASPIIRALLLLIGVSPRHFVKKPQ*
Ga0066686_1015278833300005446SoilVDRIDFVCAGALLNAIARTEAQHKTVQIAGASPIVRALLLLIGISPRHFIKQAQ*
Ga0070707_10117084723300005468Corn, Switchgrass And Miscanthus RhizosphereRIDFVCAGSLLNVINRVEAQRRAVQIVGASPIIRALLLLIGISPRHFLKKAQ*
Ga0074211_11573323300005487SedimentPVEMSQVERIDFVCPGALLNPINRIESQRKPVQIVGATPIVRALLLLIGISPRHFVKKA*
Ga0068853_10036499733300005539Corn RhizosphereDRIDFIFAGALFNAISRIETQGKAVQITGATPIVRALLLLIGISPRHFVKKVD*
Ga0070672_10016689833300005543Miscanthus RhizosphereDFVCAGALLNLIGRIESQHKSVQIVGASPIIRALLLLIGVSPRHFVKKPQ*
Ga0070665_10185138323300005548Switchgrass RhizosphereSAVQRIDFVCAGALLNAIGRVEQQRKAVQIMGASPIIRALLLLIGISPRHFLKKPQ*
Ga0070665_10199960613300005548Switchgrass RhizosphereMTAVERIDFVCAGAMLNSISRIEAQRKSVQISGASPIVRALLLLIGISPRHFVRKAA*
Ga0066670_1079148823300005560SoilVCAGALLNAIIRTEGQRKTVQIAGASPIIRALLLLIGISPRHFIKAVQ*
Ga0066708_1048832713300005576SoilVCAGALLNTINRIETQRKTVQIVGASPILRALLLLIGISPRHFVKKAA*
Ga0068859_10050848213300005617Switchgrass RhizosphereVERVDFVCAGALLNAINRVEAQRKAVQILGVSPIIRALLLLIGISPRHFLKKAQ*
Ga0068859_10079178313300005617Switchgrass RhizosphereIDFVCAGALLNLIGRIESQHKSVQIVGASPIIRALLLLIGVSPRHFVKKPQ*
Ga0068864_10191439023300005618Switchgrass RhizosphereDRIDFVCAGAMLNTITRIEGQRKSVQIAGASPIIRALLLLIGISPRHFVRKST*
Ga0068861_10113189313300005719Switchgrass RhizosphereRIDFVCAGALLNVINRIELQHKSVQLVGASPIIRALLLLIGVSPRHFVKKPQ*
Ga0066790_1015836613300005995SoilVDRIDFVCAGALLNGISRAESQRKSVQIVGATPIVRVLLLLIGISPRHFIKKAQ*
Ga0066652_10042326133300006046SoilCAGALLNTIGRIEAQRKTVQIVGASPIVRALLLLIGISPRHFVKKAA*
Ga0075417_1076141213300006049Populus RhizosphereSDVERVDFVCAGSLLNVINRVESQRKAVQIVGASPIIRALLLLIGISPRHFLKKSF*
Ga0066665_1103790313300006796SoilDFVCAGALLNAIARTEAQHKTVQIAGASPIVRALLLLIGISPRHFIKQAQ*
Ga0066659_1144261913300006797SoilERVDFVCAGALLNAIIRTEGQRKTVQIAGASPIIRALLLLIGISPRHFIKAVQ*
Ga0075428_10224253313300006844Populus RhizosphereGVERVDFIFAGALFNTISRVEGQGKAVQIVGASPIVRALLLLIGISPRHFVKKGE*
Ga0075433_1123172623300006852Populus RhizosphereERIDFICAGGLLNAINRIEGQAKAVQILGATPIVRALLLLIGISPRHFVKKTD*
Ga0068865_10085332313300006881Miscanthus RhizosphereADRIDFVCAGALLNAINRVEQQRKAVQIQGASPIIRALLTLIGISPRHFLKKPQ*
Ga0075436_10130953923300006914Populus RhizosphereGALLNTINRIEAQRKTVQIVGASPILRALLLLIGISPRHFVKKPA*
Ga0079216_1088060413300006918Agricultural SoilIDFVCAGSLLNAVTRIESQRKAVQVLGASPIIRALLLLIGLSPRHFVKKVV*
Ga0114129_1031745243300009147Populus RhizosphereVCAGAFLNTVGRVEGQRKSVQIVGASPIIRALLLLIGVSPRHFVKKTG*
Ga0114129_1147824933300009147Populus RhizosphereVERVDFIFAGALFNAITRAETQGKAVQILGASPIVRALLLLIGISPRHFVKKAD*
Ga0114129_1270021723300009147Populus RhizosphereAGVERIDFVCAGAFLNSIGRVEGQRKSVQIVGASPIIRALLLLIGVSPRHFVKRTG*
Ga0105243_1304260423300009148Miscanthus RhizosphereRVDFVCAGTLLNTINRIETQRKAVQIVGASPIIRALLLLIGISPRHFLKKSF*
Ga0075423_1067164533300009162Populus RhizosphereVCAGAFLNHITRIEGQRKAVQIVGVTPIVRALLLLLGVSPRHFVKKAE*
Ga0105101_1056313023300009171Freshwater SedimentCAGALLNAINRIEKQRRSVQIVGASPIVRALLLLIGISPRHFVKKSP*
Ga0115028_1132290313300009179WetlandDFVCAGALLNAINRVESQRKSVQIFGASPIIRALLLLIGISPRHFVKKPQ*
Ga0105249_1110106913300009553Switchgrass RhizosphereFIFAGALFNAISRVEGQGKAVQILGASPIVRALLLLIGISPRHFVKKAD*
Ga0134080_1047442513300010333Grasslands SoilDFVCAGALLNAIVRAEGQRKTVQIAGATPIIRALLLLIGISPRHFIKKPQ*
Ga0126347_138289323300010867Boreal Forest SoilAVDRIDFVCAGALSNAIVRAESQRKGVQIIGASPIIRALLLLIGVSPRHFVKKAQ*
Ga0120153_105880913300011991PermafrostMSAVDRIDFVCAGAFSNAIIRAESQRKGVQIIGASPIIRALLLLIGISPRHFVKKAQ*
Ga0120156_103874023300011996PermafrostTIPIYMSAVDRIDFVCAGAFSNAIIRAESQRKGVQIIGASPIIRALLLLIGISPRHFVKKAQ*
Ga0137399_1151494023300012203Vadose Zone SoilMSAVDRIDFVCSGALLNGIIRAEGQRKTVQIAGASPIIRALLLLIGISP
Ga0137378_1120779513300012210Vadose Zone SoilIDFVCAGAFSNAIVRAESQRKGVQIIGASPIIRALLLLIGISPRHFVKKSQ*
Ga0137384_1111098013300012357Vadose Zone SoilTIPIDMTAVDRIDFVCAGAFSNAIVRAESQRKGVQIIGASPIIRALLLLIGISPRHFVKKSQ*
Ga0137361_1167632923300012362Vadose Zone SoilDFVCAGALFNAIARTESQRKTVQIAGASPIIRALLLLIGISPRHFIKTAQ*
Ga0157337_103271713300012483Arabidopsis RhizosphereVDFIFAGALLNAITRIETLGKAVQITGATPIVRALLLLIGISPRHFVKKVD*
Ga0137373_1029214413300012532Vadose Zone SoilCAGALLNTITRIEAQRKTVQIVGASPIVRALLLLIGISPRHFVKKAA*
Ga0136613_1024600233300012681Polar Desert SandVERIDFVASGALANAINRIETQRKAIQFVGVSPIIRAMLLLIGVSPRHFVKKG*
Ga0157308_1041284923300012910SoilAGALFNTISRVEAQGKAVQIVGASPIVRALLLLIGISPRHFVKKGE*
Ga0164298_1108506513300012955SoilDMTDVDRVDFIFAGALLNAITRIETLGKAVQITGATPIVRALLLLIGISPRHFVKKVD*
Ga0164299_1170019223300012958SoilALLNAITRSETLGKAVQFTGGTPIVRALLLLIGISPRHFVKKVD*
Ga0164302_1143895413300012961SoilIDFVCAGAIFNAISRAESQRKSIQIIGASPIIRALLLLIGISPRHFIKKAT*
Ga0126369_1230349113300012971Tropical Forest SoilSGVDRIDFVCAGAVLNAIARIEGQRKSVQIIGASPMIRALLLLIGVSPRHFVKKSA*
Ga0164305_1177113523300012989SoilVDFIFAGALFNTITRVEGQGKAVQIVGASPIVRALLLLIGISPRHFVKKGE*
Ga0157370_1104284013300013104Corn RhizosphereIDFVCAGALLNAIARIESQGKAVQIEAVSPIVRALLLLVGISPRHFVRKID*
Ga0157378_1081273313300013297Miscanthus RhizosphereTDVDRIDFIFAGALFNAISRIETQGKAVQIIGATPIVRALLLLIGISPRHFVKKVD*
Ga0163162_1117418823300013306Switchgrass RhizosphereSAVERIDFVCAGSLLNVINRVESQRKAVQIVGASPIIRALLLLIGISPRHFLKKSF*
Ga0157372_1118617033300013307Corn RhizosphereALLNAIGRIESQGKSVEIESISPIVRALLLLIGISPRHFVRKVD*
Ga0157375_1007103613300013308Miscanthus RhizosphereGALLNLIGRIESQHKSVQIVGASPIIRALLLLIGVSPRHFVKKPQ*
Ga0075354_103210133300014308Natural And Restored WetlandsDFVCAGALLNAINRVESQRKSVQIFGASPIVRALLLLIGISPRHFVKKPQ*
Ga0075352_117404823300014324Natural And Restored WetlandsSEVERIDFVCAGALLNQITRIEAQRKAIQIVGASPILRALLLLIGVSPRHFVKKSN*
Ga0180063_127639423300014885SoilVCAGALLNAINRVESQRKSVQIFGASPIIRALLLLIGISPRHFVKKPQ*
Ga0167668_109914813300015193Glacier Forefield SoilRIDFVCAGAFSNAIIRAESQRKGVQIIGASPIIRALLLLIGISPRHFVKKAQ*
Ga0180089_113927513300015254SoilMTLVDRVDFVCAGALLNTVTRVEGQRKAVQIHGASPIIRALLLLIGLSPRHFVRKKG*
Ga0163144_1141685223300015360Freshwater Microbial MatFVCAGALFNAINRIEQQRKAVQIVGATPIIRALLLLIGISPRHFVKKPQ*
Ga0132258_1021501473300015371Arabidopsis RhizosphereGALLNAINRVETQRRAVQIVGASPIIRALLLLIGISPRHFVKKAT*
Ga0132255_10439423423300015374Arabidopsis RhizosphereVDFVCAGALLNAINRVEAQRKAVQILGVSPIVRALLLLIGISPRHFLKKAQ*
Ga0182036_1057192023300016270SoilDRIDFVCAGALLNSVSRTEAQRKTVQIIGASPIIRALLLLIGISPRHFIKKAQ
Ga0182033_1014918133300016319SoilVERIDFVCAGALLNAIGRAESQRKTVQIAGATPIIRALLLLIGISPRHFVKKAQ
Ga0182037_1147820913300016404SoilAGAFLNHISRIEAQRKAVQIVGVTPIIRALLLLLGVSPRHFVKKAE
Ga0182038_1053865833300016445SoilDFVCAGALLNAIGRAESQRKTVQIAGATPIIRALLLLIGISPRHFVKKAQ
Ga0134069_136663123300017654Grasslands SoilVCAGALLNAIVRAEGQRKTVQIAGATPIIRALLLLIGISPRHFIKKPQ
Ga0134074_125090723300017657Grasslands SoilRIDFVCAGALLNAIIRAEGQRKTVQMAGASPIIRALLLLIGISPRHFIKKPQ
Ga0187765_1053690423300018060Tropical PeatlandIDFVCAGALFNAIGRVESQRKTVQLSGATPIIRALLLLIGISPRHFVKKAP
Ga0184635_1004172133300018072Groundwater SedimentAGALLNAIIRAEGQRKTVQIAGASPIIRALLLLLGISPRHFIKKPQ
Ga0184632_1018702913300018075Groundwater SedimentRIDFVCAGALLNAIIRAEGQRKTVQIAGASPIIRALLLLLGISPRHFIKKPQ
Ga0184612_1061779313300018078Groundwater SedimentCAGALLNAIIRAEGQRKTVQIAGASPIIRALLLLLGISPRHFIKKPQ
Ga0190274_1192168523300018476SoilDMSDVDRVDFIFAGALFNAIARIEVQGNAVQIFGATPIIRALLLLIGISPRHFVKKAT
Ga0190271_1254242413300018481SoilVAAVERIDFVCAGSLLNAVNRIEGQRKAVQVLGASPIIRALLLLIGLSPRHFVKKAV
Ga0173479_1042889723300019362SoilIDMTSVDRIDFVCAGSLLNAINRIEHQRKAVQIIGASPIIRALLLLIGISPRHFLKRAT
Ga0193727_103835413300019886SoilIPIDMSAVDRMDFVCAGAFSNAIIRAESQRKGVQIIGASPIIRALLLLIGISPRHFVKKA
Ga0193751_106167533300019888SoilDRMDFVCAGAFSNAIIRAESQRKGVQIIGASPIIRALLLLIGISPRHFVKKAQ
Ga0193751_108789113300019888SoilCAGALSNAIVRAESQRKGVQIIGASPIIRALLLLIGISPRHFIKKAQ
Ga0193695_105301823300021418SoilFVCAGALLNAIIRAEGQRKTVQIAGASPIIRALLLLIGISPRHFIRKPQ
Ga0224452_101773533300022534Groundwater SedimentFVCAGALLNAIIRAEGQRKTVQIAGASPIIRALLLLLGISPRHFIKKPQ
Ga0207697_1010039813300025315Corn, Switchgrass And Miscanthus RhizosphereERIDFVCAGALLNLIGRIESQHKSVQIIGASPIIRALLLLIGVSPRHFLKKAQ
Ga0207688_1042742113300025901Corn, Switchgrass And Miscanthus RhizosphereMTGVERVDFIFAGALFNTITRVEGQGKAVQIVGASPIVRALLLLIGISPRHFVKKGE
Ga0207671_1093211313300025914Corn RhizosphereVCAGSLRNVINRVASQRKAVQIVGASPIIRALLLLIGISPRHFLKKSF
Ga0207660_1067214413300025917Corn RhizosphereAGALSNAIARIESQGKAVQIVGATPIVRALLLLIGISPRHFVKNVG
Ga0207657_1019308213300025919Corn RhizosphereFIFAGALFNTISRVEAQGKAVQIVGASPIVRALLLLIGISPRHFVKKGE
Ga0207657_1033183113300025919Corn RhizosphereVDRIDFIFAGALFNAISLIETQGKAVQITGATPIVRALLLLIGISPRHFVKKVD
Ga0207657_1146347213300025919Corn RhizosphereRVERIDFICAGALLNAIGRIEGQGKAVQIVGASPIVRALLLLIGISPRHFVKKSA
Ga0207657_1149085213300025919Corn RhizosphereFVCAGALLNAINRIEGQRKVVQVSGASPIIRALLLLIGISPRHFIRQAT
Ga0207649_1004436913300025920Corn RhizosphereKPTVIDFIFAGALFNAISRIETQGKAVQITGATPIVRALLLLIGISPRHFVKKVD
Ga0207681_1175972713300025923Switchgrass RhizosphereEVERIDFVCAGAFLNHITRIEAQRKAVQIVGVTPIVRALLLLLGVSPRHFVKKAE
Ga0207681_1186035713300025923Switchgrass RhizospherePIDMSGVDRIDFVCAGAMLNAINNVEKQRKVVEIFGATPIIVAILLLIGLTPGHFVKKAP
Ga0207694_1095071613300025924Corn RhizosphereVDFIFAGALLNAITRIETLGKAVQIIGATPIVRALLLLIGISPRHFVKKAD
Ga0207659_1103068423300025926Miscanthus RhizosphereRIDSVCAGAMLNAINRIEGQRKSVQISGASPIIRALLLLIGISPRHFVRKAA
Ga0207700_1194026113300025928Corn, Switchgrass And Miscanthus RhizosphereIDFVCAGAIFNAISRAESQRKSIQIIGASPIIRALLLLIGISPRHFIKKAT
Ga0207644_1078846813300025931Switchgrass RhizosphereIDFVCAGALLNLIGRIESQHKSVQIIGASPIIRALLLLIGVSPRHFLKKAQ
Ga0207669_1120459413300025937Miscanthus RhizosphereAGALLNLIGRIESQHKSVQIVGASPIIRALLLLIGVSPRHFVKKPQ
Ga0207711_1058671033300025941Switchgrass RhizosphereGALFNAISRIETQGKAVQIIGATPIVRALLLLIGISPRHFVKKVD
Ga0207711_1083077533300025941Switchgrass RhizosphereDRIDFIFAGALFNAISRIETQGKAVQITGATPIVRALLLLIGISPRHFVKKVD
Ga0207667_1113560413300025949Corn RhizosphereGALTNVVTRVESQGKSVQIAGATPIVRALLLLIGISPRHFVKKTD
Ga0207667_1180591413300025949Corn RhizosphereDRVDFIFAGALLNAITRIETLGKAVQIIGATPIVRALLLLIGISPRHFVKKAD
Ga0207651_1060695923300025960Switchgrass RhizosphereMIDMTKVDRVDFVCAGTLLNTINRIETQRKAVQIVGASPIIRALLLLIGISPRHFLKKSQ
Ga0207712_1034115113300025961Switchgrass RhizosphereCAGTLLNTINRIETQRKAVQIVGASPIIRALLLLIGISPRHFLKKSQ
Ga0207712_1069614413300025961Switchgrass RhizosphereCAGSLLNVINRVESQRKAVQIVGASPIIRALLLLIGISPRHFLKKSF
Ga0210105_100775033300025966Natural And Restored WetlandsIDFVCAGAFLNVVNRIEGQRKSVQIVGATPIIRALLLLIGLPPRHFVKKAA
Ga0207640_1036721633300025981Corn RhizosphereAVQRIDFVCAGALLNAIGRVEQQRKAVQIMGASPIIRALLLLIGISPRHFLKKPQ
Ga0207640_1104876313300025981Corn RhizosphereVADLERIDFVCAGALLNTINRIETQRKSVQIVGASPIIRALLLLIGISPRHFVRKTA
Ga0207640_1108723223300025981Corn RhizospherePVVPIDMTAVDRIDFVCAGSLLNAINRIEHQRKAVQIIGASPIIRALLLLIGISPRHFLKRAT
Ga0209966_105111823300027695Arabidopsis Thaliana RhizosphereMTDVERVDFIFAGALFNAITRAETQGKAVQILGASPIVRALLLLIGISPRHFVKKAD
Ga0209575_1028750613300027739FreshwaterVDFVCAGALLNAVHRIEQQRKAVQIVGATPIVRALLLLIGISPRHFVKKAD
Ga0209073_1000494313300027765Agricultural SoilFICAGALLNAITRIEGQGKAVQILGATPIVRALLLLIGISPRHFVKKAG
Ga0209683_1006010233300027840Wetland SedimentDFVCAGALLNTINRIEKQRRSVQIVGASPIVRALLLLIGISPRHFVKKSE
Ga0209397_1050665613300027871WetlandFVCAGALLNAINNVELQRKSVQIAGASPIIRALLLLIGISPRHFVKKDV
Ga0209814_1054863113300027873Populus RhizosphereSDVERVDFVCAGSLLNVINRVESQRKAVQIVGASPIIRALLLLIGISPRHFLKKSF
Ga0209668_1060312513300027899Freshwater Lake SedimentGALLNAINGVELQRKSVQITGASPIIRALLLLIGISPRHFVKKDV
Ga0209048_1102908113300027902Freshwater Lake SedimentVERVDFVCAGALLNAINRVESQRKAVQIIGASPIVRALLLLIGISPRHFVKKAQ
Ga0209705_1027652813300027979Freshwater SedimentFVCAGALLNAINRIEKQRRSVQIVGASPIVRALLLLIGISPRHFVKKSP
Ga0268264_1069435013300028381Switchgrass RhizosphereDFVCAGTLLNTISRIETQRKAVQIVGASPIIRALLLLIGISPRHFLKKSQ
Ga0268264_1116660513300028381Switchgrass RhizosphereCAGSLLNVINRVEAQRKAVQIVGASPIIRALLLLIGISPRHFLKKPQ
Ga0247828_1061162523300028587SoilAGALLNAITRIETLGKAVQITGATPIVRALLLLIGISPRHFVKKVD
Ga0247821_1066627013300028596SoilNDVTQVNMTGVERVDFIFAGALFNTISRVEGQGKAVQIVGASPIVRALLLLIGISPRHFVKKGE
Ga0302171_1011281813300028651FenIDFVCAGSLLNTINRIEAQRKAVQILGASPIIRALLLLIGISPRHFLKRAP
Ga0302264_106686913300028732FenAGALLNAIGRAEAQRKAVQIIGATPIIRALLLLIGISPRHFIKKAG
Ga0302261_103668613300028733FenIDFVCAGSLLNTINRIEAQRKAVQIMGASPIIRALLLLIGISPRHFLKRTP
Ga0302258_109475213300028770FenAGSLLNTINRIEAQRKAVQILGASPIIRALLLLIGISPRHFLKRAP
Ga0302272_111071223300030001BogIDMTAVDRIDFVCAGSLMNAIYRVESQRKAVQIVGASPIIRALLLLIGVSPRHFLKRAT
Ga0302273_111058413300030048BogVDRIDFVCAGSLLNAINRIEAQRKAVQIMGASPIIRALLLLIGISPRHFLKRSP
Ga0311349_1097995913300030294FenEVDRIDFVCAGSLLNAINRVESQRKAVQIVGASPIIRALLLLIGISPRHFLKRAP
(restricted) Ga0255311_110539613300031150Sandy SoilERMDFVCAGAFLNALGRVESQRKSVQIVGASPIIRALLLLIGVSPRNFVKKSG
Ga0311364_1122456913300031521FenDRVDFVCAGALLNAIGRAEAQRKAVQIIGATPIIRALLLLIGISPRHFIKKAG
Ga0310886_1096573213300031562SoilVDFIFAGALFNTITRVEAQGKAVQIVGASPIVRALLLLIGISPRHFVKKGE
Ga0307469_1031173613300031720Hardwood Forest SoilGAFLNHVTRIESQRKAVQIVGVSPIVRALLLLLGVSPRHFVKKAE
Ga0307469_1242146123300031720Hardwood Forest SoilIDFVCAGALLNGISRAESQRKSVQIVGASPIIRALMLLIGISPRHFIKKAQ
Ga0311351_1141727823300031722FenAVDRIDFVCAGSLLNTINRIEAQRKAVQILGASPIIRALLLLIGISPRHFLKRAA
Ga0302321_10308599213300031726FenDFVCAGSLLNAINRIEGQRKAVQIMGASPIIRALLLLIGISPRHFLKRSP
Ga0307468_10047784733300031740Hardwood Forest SoilSEVERIDFVCAGALLNTINRIEAQRKSVQIAGATPIIRALLLLIGISPRHFVKKA
Ga0318509_1072148123300031768SoilVDRIDFVCAGALFNAIGKVESQRKTVQISGATPIIRALLLLIGISPRHFVKKAP
Ga0318512_1024429633300031846SoilIDFVCAGALLNAIGRAESQRKTVQIAGATPIIRALLLLIGISPRHFVKKAQ
Ga0307406_1100796913300031901RhizosphereVDFIFAGALFNAIARVESQGKAVQIVGATPIIRALLLLIGISPRHFVRKAD
Ga0311367_1125281613300031918FenTNVERMDFVCAGALLNTINRIETQRKSVQIIGATPIVRALLLLIGISPRHFVKKAQ
Ga0315278_1205929913300031997SedimentERIDFVCAGALLNLINRIEAQRKAVQIVGASPIIRSLLLLIGVSPRHFVKKPQ
Ga0307416_10029732933300032002RhizosphereAVERIDFVCAGSLLNAVTRVEGQRKAVQVLGASPIIRALLLLIGLSPRHFVKKVV
Ga0307416_10268960823300032002RhizosphereIDFVCAGAMLNTINRVEGQRKSVQISGASPIIRALLLLIGISPRHFVRKAA
Ga0310890_1033403933300032075SoilAGAFLNLIGRIESQHKSVQIVGASPIIRALLLLIGVSPRHFVKKPQ
Ga0310890_1142584313300032075SoilAGAFLNAIGRVEGQRKSVQIVGASPIIRALLLLIGVSPRHFVKKTG
Ga0315292_1168608413300032143SedimentIDFVCAGALFNVITRIETQRKAVQFVGASPIIRALLLLLGVSPRNFVKKSQ
Ga0315283_1123725123300032164SedimentAGALVNLINRIESQKKAIQIVGASPIIRALLLLIGVSPHHFVKKPQ
Ga0315276_1187715613300032177SedimentCAGALLNLINRIESQRKAIQIVGASPIIRALLLLIGVSPRHFVKKPQ
Ga0335071_1032481333300032897SoilDMSDADRVDFVCAGALLNIINRVEAQRKAVQIVGASPIIRALLLLIGISPRHFLKRPQ
Ga0334722_1106318823300033233SedimentMDFVCAGALLNVINRIESQRKAIQIVGASPIIRALLLLIGVSPRHFVKKPQ
Ga0310810_1024677713300033412SoilFIFAGALLNAITRIETLGKAVQITGATPIVRALLLLIGISPRHFVKKVD
Ga0316603_1053751533300033413SoilVCAGALLNAINSVELQRKSVQIAGASPIIRALLLLIGISPRHFVKKDV
Ga0316619_1223866813300033414SoilERVDFVCAGALLNAINRVESQRKSVQIFGASPIIRALLLLIGISPRHFVKKDV
Ga0316601_10034772133300033419SoilSAVSRVDFVCAGALLNAINNVELQRKSVQIAGASPIIRALLLLIGISPRHFVKKDV
Ga0326726_1110461323300033433Peat SoilPIEMTAVDRIDFVCAGALLNAISRTESQRKSVQIIGASPIIRALMLLIGISPRHFIKKAQ
Ga0316616_10080070313300033521SoilERIDFVCAGAFLNAVSRIEAQRKSVQIVGATPIIRALLLLIGLPPRHFVKKNV
Ga0364943_0421852_5_1783300034354SedimentMSEVERIDFVCAGAFLNVINRIELQRKTVQIVGASPIIRALLLLIGVSPRHFVKKPQ
Ga0370485_0082664_2_1393300034358Untreated Peat SoilGALLNAINRIEAQRKAVQIMGASPIIRALLLLIGISPRHFLKRAP
Ga0364941_093444_560_7183300034417SedimentRIDFVCAGSLLNAINRVESQRRAVQIIGASPIIRALLLLIGISPRHFLKRAT


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