Metagenome / Metatranscriptome Family F034081

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F034081
Family Type	Metagenome / Metatranscriptome
Number of Sequences	175
Average Sequence Length	65 residues
Representative Sequence	MATRNDTNDQNKAADEAARTARTVTDEAARVGEQTARAGADVFRRGTETARDNLQQGLNT
Number of Associated Samples	94
Number of Associated Scaffolds	175

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	87.28 %
% of genes near scaffold ends (potentially truncated)	96.57 %
% of genes from short scaffolds (< 2000 bps)	97.14 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (63.429 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (28.571 % of family members)
Environment Ontology (ENVO)	Unclassified (43.429 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.286 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.77% β-sheet: 0.00% Coil/Unstructured: 35.23%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 175 Family Scaffolds
PF13545	HTH_Crp_2	2.29
PF09361	Phasin_2	2.29
PF00072	Response_reg	1.14
PF13610	DDE_Tnp_IS240	1.14
PF01165	Ribosomal_S21	1.14
PF00872	Transposase_mut	1.14
PF06823	DUF1236	1.14
PF00313	CSD	1.14
PF00196	GerE	0.57
PF00293	NUDIX	0.57
PF01734	Patatin	0.57
PF14307	Glyco_tran_WbsX	0.57
PF07799	DUF1643	0.57
PF13358	DDE_3	0.57
PF09339	HTH_IclR	0.57
PF07311	Dodecin	0.57
PF00884	Sulfatase	0.57
PF00920	ILVD_EDD	0.57
PF01464	SLT	0.57
PF03734	YkuD	0.57

COG ID	Name	Functional Category	% Frequency in 175 Family Scaffolds
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	1.14
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	1.14
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	1.14
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.57
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.57
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.57
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.57
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.57
COG4333	Uncharacterized conserved protein, DUF1643 domain	Function unknown [S]	0.57
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.57

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.43 %
All Organisms	root	All Organisms	36.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.43 %
cellular organisms	root	All Organisms → cellular organisms	36.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.43 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.86 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	1.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.43 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.57 %
uncultured bacterium esnapd21	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium esnapd21	1.14 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.43 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	21.14 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.14 %
uncultured bacterium esnapd21	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium esnapd21	1.14 %
Legionellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.43 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	12.00 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.71 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.14 %
Salinarimonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Salinarimonadaceae	1.14 %
uncultured bacterium esnapd21	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium esnapd21	1.14 %
Legionellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.43 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	10.29 %
Salinarimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Salinarimonadaceae → Salinarimonas	1.14 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.14 %
uncultured bacterium esnapd21	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium esnapd21	1.14 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples	0.57 %
Legionella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.43 %
Microvirga lupini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	2.29 %
Salinarimonas soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Salinarimonadaceae → Salinarimonas → Salinarimonas soli	1.14 %
uncultured bacterium esnapd21	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium esnapd21	1.14 %
Microvirga lotononidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis	0.57 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.57 %
uncultured Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	0.57 %
Microvirga pudoricolor	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga pudoricolor	0.57 %
Legionella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella	0.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.43 %
Microvirga lupini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	2.29 %
Salinarimonas soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Salinarimonadaceae → Salinarimonas → Salinarimonas soli	1.14 %
uncultured bacterium esnapd21	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium esnapd21	1.14 %
Bradyrhizobium sp. Tv2a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	0.57 %
Microvirga lotononidis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis	0.57 %
uncultured Acetobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	0.57 %
Microvirga pudoricolor	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga pudoricolor	0.57 %
Legionella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella	0.57 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_109377839	Not Available	763	Open in IMG/M
3300001205\|C688J13580_1011185	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300001305\|C688J14111_10047338	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300001305\|C688J14111_10108587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	846	Open in IMG/M
3300001686\|C688J18823_10237097	Not Available	1217	Open in IMG/M
3300001686\|C688J18823_10295884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1064	Open in IMG/M
3300001686\|C688J18823_10897372	Not Available	562	Open in IMG/M
3300002568\|C688J35102_119435099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	694	Open in IMG/M
3300002568\|C688J35102_119955165	Not Available	826	Open in IMG/M
3300003305\|Ga0006770J48903_1052000	Not Available	736	Open in IMG/M
3300003579\|Ga0007429J51699_1035219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	737	Open in IMG/M
3300003692\|Ga0007426_1037729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	757	Open in IMG/M
3300004081\|Ga0063454_100468574	Not Available	873	Open in IMG/M
3300004081\|Ga0063454_101628699	Not Available	558	Open in IMG/M
3300004153\|Ga0063455_100355594	Not Available	838	Open in IMG/M
3300004153\|Ga0063455_100648900	Not Available	699	Open in IMG/M
3300004479\|Ga0062595_102268705	Not Available	534	Open in IMG/M
3300005093\|Ga0062594_101751526	Not Available	652	Open in IMG/M
3300005093\|Ga0062594_102290577	Not Available	587	Open in IMG/M
3300005093\|Ga0062594_103113357	Not Available	519	Open in IMG/M
3300005338\|Ga0068868_101404900	Not Available	651	Open in IMG/M
3300005338\|Ga0068868_101608277	Not Available	611	Open in IMG/M
3300005340\|Ga0070689_100826557	Not Available	816	Open in IMG/M
3300005347\|Ga0070668_101077049	Not Available	725	Open in IMG/M
3300005347\|Ga0070668_102249845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	504	Open in IMG/M
3300005356\|Ga0070674_101439333	Not Available	618	Open in IMG/M
3300005364\|Ga0070673_101322201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	677	Open in IMG/M
3300005457\|Ga0070662_101877104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	518	Open in IMG/M
3300005459\|Ga0068867_100170459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1723	Open in IMG/M
3300005548\|Ga0070665_101746860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	629	Open in IMG/M
3300005615\|Ga0070702_101602383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	539	Open in IMG/M
3300005719\|Ga0068861_102377217	Not Available	532	Open in IMG/M
3300005834\|Ga0068851_10322738	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300005843\|Ga0068860_102167003	Not Available	577	Open in IMG/M
3300006954\|Ga0079219_11785296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	574	Open in IMG/M
3300009098\|Ga0105245_10936461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	909	Open in IMG/M
3300009098\|Ga0105245_10956469	Not Available	900	Open in IMG/M
3300009101\|Ga0105247_10753584	Not Available	738	Open in IMG/M
3300009101\|Ga0105247_11852241	Not Available	503	Open in IMG/M
3300009177\|Ga0105248_10179825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	2383	Open in IMG/M
3300009553\|Ga0105249_10542995	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300009553\|Ga0105249_11986296	Not Available	654	Open in IMG/M
3300009553\|Ga0105249_13413911	Not Available	511	Open in IMG/M
3300009789\|Ga0126307_10120025	All Organisms → cellular organisms → Bacteria → Proteobacteria	2093	Open in IMG/M
3300009789\|Ga0126307_10309467	Not Available	1271	Open in IMG/M
3300009789\|Ga0126307_10333746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	1221	Open in IMG/M
3300009789\|Ga0126307_11172428	Not Available	622	Open in IMG/M
3300009789\|Ga0126307_11480115	Not Available	551	Open in IMG/M
3300009840\|Ga0126313_10522993	Not Available	951	Open in IMG/M
3300009840\|Ga0126313_10989955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	688	Open in IMG/M
3300009840\|Ga0126313_11035623	Not Available	673	Open in IMG/M
3300009840\|Ga0126313_11274826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	607	Open in IMG/M
3300010036\|Ga0126305_10885139	Not Available	609	Open in IMG/M
3300010036\|Ga0126305_11038933	Not Available	563	Open in IMG/M
3300010037\|Ga0126304_10260185	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium esnapd21	1143	Open in IMG/M
3300010037\|Ga0126304_10483583	Not Available	831	Open in IMG/M
3300010037\|Ga0126304_10606141	Not Available	738	Open in IMG/M
3300010037\|Ga0126304_11045639	Not Available	557	Open in IMG/M
3300010037\|Ga0126304_11103762	Not Available	542	Open in IMG/M
3300010038\|Ga0126315_10485803	Not Available	786	Open in IMG/M
3300010038\|Ga0126315_10579295	Not Available	723	Open in IMG/M
3300010038\|Ga0126315_10669488	Not Available	675	Open in IMG/M
3300010039\|Ga0126309_10468120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	769	Open in IMG/M
3300010039\|Ga0126309_10658730	Not Available	667	Open in IMG/M
3300010039\|Ga0126309_10708611	Not Available	647	Open in IMG/M
3300010039\|Ga0126309_10789500	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300010039\|Ga0126309_11305403	Not Available	502	Open in IMG/M
3300010040\|Ga0126308_10167216	All Organisms → cellular organisms → Bacteria	1398	Open in IMG/M
3300010040\|Ga0126308_10934976	Not Available	605	Open in IMG/M
3300010040\|Ga0126308_10994438	Not Available	588	Open in IMG/M
3300010041\|Ga0126312_10767844	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300010042\|Ga0126314_10445973	Not Available	936	Open in IMG/M
3300010042\|Ga0126314_11300352	Not Available	545	Open in IMG/M
3300010044\|Ga0126310_10111984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Salinarimonadaceae → Salinarimonas → Salinarimonas soli	1675	Open in IMG/M
3300010044\|Ga0126310_10478464	Not Available	905	Open in IMG/M
3300010044\|Ga0126310_10674884	Not Available	780	Open in IMG/M
3300010044\|Ga0126310_10884301	Not Available	694	Open in IMG/M
3300010044\|Ga0126310_10999770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	659	Open in IMG/M
3300010044\|Ga0126310_11012820	Not Available	655	Open in IMG/M
3300010044\|Ga0126310_11026465	Not Available	651	Open in IMG/M
3300010044\|Ga0126310_11109323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	630	Open in IMG/M
3300010044\|Ga0126310_11115457	Not Available	628	Open in IMG/M
3300010044\|Ga0126310_11309439	Not Available	586	Open in IMG/M
3300010044\|Ga0126310_11627075	Not Available	534	Open in IMG/M
3300010045\|Ga0126311_10248914	Not Available	1318	Open in IMG/M
3300010045\|Ga0126311_10389622	Not Available	1070	Open in IMG/M
3300010045\|Ga0126311_11606319	Not Available	547	Open in IMG/M
3300010045\|Ga0126311_11611949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	546	Open in IMG/M
3300010045\|Ga0126311_11867507	Not Available	510	Open in IMG/M
3300010045\|Ga0126311_11874523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → environmental samples → uncultured Acetobacteraceae bacterium	509	Open in IMG/M
3300010071\|Ga0127477_159232	Not Available	535	Open in IMG/M
3300010108\|Ga0127474_1070636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella	677	Open in IMG/M
3300010109\|Ga0127497_1054378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga pudoricolor	631	Open in IMG/M
3300010121\|Ga0127438_1067493	Not Available	530	Open in IMG/M
3300010146\|Ga0126320_1176216	Not Available	812	Open in IMG/M
3300010166\|Ga0126306_10148460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1739	Open in IMG/M
3300010166\|Ga0126306_10865204	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium esnapd21	732	Open in IMG/M
3300010166\|Ga0126306_11122255	Not Available	644	Open in IMG/M
3300010375\|Ga0105239_11138547	Not Available	899	Open in IMG/M
3300010375\|Ga0105239_13085001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300010399\|Ga0134127_13622996	Not Available	507	Open in IMG/M
3300010400\|Ga0134122_10495722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1104	Open in IMG/M
3300011119\|Ga0105246_10181304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1622	Open in IMG/M
3300011119\|Ga0105246_12584160	Not Available	501	Open in IMG/M
3300011332\|Ga0126317_11037992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	696	Open in IMG/M
3300012212\|Ga0150985_103003320	Not Available	611	Open in IMG/M
3300012212\|Ga0150985_106217098	Not Available	501	Open in IMG/M
3300012212\|Ga0150985_109469765	Not Available	573	Open in IMG/M
3300012212\|Ga0150985_111815277	Not Available	1114	Open in IMG/M
3300012212\|Ga0150985_112342570	Not Available	906	Open in IMG/M
3300012212\|Ga0150985_116700449	Not Available	1805	Open in IMG/M
3300012374\|Ga0134039_1008432	Not Available	725	Open in IMG/M
3300012377\|Ga0134029_1141163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	704	Open in IMG/M
3300012390\|Ga0134054_1194455	All Organisms → cellular organisms → Bacteria → Proteobacteria	824	Open in IMG/M
3300012397\|Ga0134056_1304048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	711	Open in IMG/M
3300012399\|Ga0134061_1298862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	699	Open in IMG/M
3300012404\|Ga0134024_1374852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	749	Open in IMG/M
3300012405\|Ga0134041_1160571	Not Available	577	Open in IMG/M
3300012409\|Ga0134045_1237578	Not Available	577	Open in IMG/M
3300012410\|Ga0134060_1138419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	640	Open in IMG/M
3300012410\|Ga0134060_1336173	Not Available	720	Open in IMG/M
3300012469\|Ga0150984_101530463	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300012469\|Ga0150984_104238734	Not Available	843	Open in IMG/M
3300012469\|Ga0150984_107433387	Not Available	605	Open in IMG/M
3300012469\|Ga0150984_109682634	Not Available	667	Open in IMG/M
3300012469\|Ga0150984_109784009	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300012469\|Ga0150984_116892673	Not Available	547	Open in IMG/M
3300012469\|Ga0150984_119847594	Not Available	601	Open in IMG/M
3300012951\|Ga0164300_10037452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1833	Open in IMG/M
3300012958\|Ga0164299_10263732	Not Available	1037	Open in IMG/M
3300013296\|Ga0157374_11048786	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300013296\|Ga0157374_11467964	Not Available	705	Open in IMG/M
3300013297\|Ga0157378_12469641	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300013306\|Ga0163162_10150928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	2441	Open in IMG/M
3300013306\|Ga0163162_10352553	All Organisms → cellular organisms → Bacteria	1604	Open in IMG/M
3300013306\|Ga0163162_11529111	Not Available	760	Open in IMG/M
3300013308\|Ga0157375_10668557	Not Available	1194	Open in IMG/M
3300013308\|Ga0157375_13523431	Not Available	521	Open in IMG/M
3300014326\|Ga0157380_12166363	Not Available	619	Open in IMG/M
3300014968\|Ga0157379_11705434	Not Available	617	Open in IMG/M
3300014969\|Ga0157376_10253650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Salinarimonadaceae → Salinarimonas → Salinarimonas soli	1644	Open in IMG/M
3300015373\|Ga0132257_102752170	All Organisms → cellular organisms → Bacteria → Proteobacteria	641	Open in IMG/M
3300015374\|Ga0132255_103479872	Not Available	670	Open in IMG/M
3300015374\|Ga0132255_103779585	Not Available	643	Open in IMG/M
3300017792\|Ga0163161_10241109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1406	Open in IMG/M
3300018466\|Ga0190268_11256291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	620	Open in IMG/M
3300018466\|Ga0190268_12117143	Not Available	522	Open in IMG/M
3300019767\|Ga0190267_10343657	Not Available	800	Open in IMG/M
3300019767\|Ga0190267_10383898	Not Available	775	Open in IMG/M
3300019767\|Ga0190267_10690697	Not Available	654	Open in IMG/M
3300020078\|Ga0206352_10580691	Not Available	645	Open in IMG/M
3300025321\|Ga0207656_10508353	Not Available	612	Open in IMG/M
3300025901\|Ga0207688_10278244	Not Available	1019	Open in IMG/M
3300025901\|Ga0207688_10340783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	922	Open in IMG/M
3300025901\|Ga0207688_10745964	Not Available	620	Open in IMG/M
3300025927\|Ga0207687_10367404	All Organisms → cellular organisms → Bacteria	1176	Open in IMG/M
3300025937\|Ga0207669_11179021	Not Available	648	Open in IMG/M
3300025961\|Ga0207712_10994112	Not Available	744	Open in IMG/M
3300025961\|Ga0207712_11318011	Not Available	645	Open in IMG/M
3300025972\|Ga0207668_10375246	Not Available	1196	Open in IMG/M
3300026067\|Ga0207678_10237124	All Organisms → cellular organisms → Bacteria	1562	Open in IMG/M
3300026067\|Ga0207678_11600357	Not Available	574	Open in IMG/M
3300026075\|Ga0207708_11658348	Not Available	562	Open in IMG/M
3300026095\|Ga0207676_10896471	Not Available	870	Open in IMG/M
3300026118\|Ga0207675_100277843	All Organisms → cellular organisms → Bacteria	1626	Open in IMG/M
3300028379\|Ga0268266_10668751	Not Available	1000	Open in IMG/M
3300028379\|Ga0268266_11977495	Not Available	557	Open in IMG/M
3300030905\|Ga0308200_1107843	Not Available	601	Open in IMG/M
3300030993\|Ga0308190_1085464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	669	Open in IMG/M
3300031548\|Ga0307408_101100607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	737	Open in IMG/M
3300034002\|Ga0334920_020009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lotononidis	1218	Open in IMG/M
3300034221\|Ga0334937_217879	Not Available	528	Open in IMG/M
3300034668\|Ga0314793_060366	Not Available	717	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.29%
Host-Associated	Host-Associated	41.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.14%
Plants	Host-Associated → Plants	41.71%
Aquatic	Environmental → Aquatic	1.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.00%
Freshwater	Environmental → Aquatic → Freshwater	1.14%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.71%
Loam	Environmental → Terrestrial → Soil → Loam	8.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.29%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.14%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	1.14%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.71%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	6.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.29%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.71%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.14%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	1.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.57%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.57%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	28.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.00%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	6.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.14%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	5.14%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	4.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.29%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.71%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.14%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.14%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.14%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.14%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.57%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.57%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	0.57%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	0.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.57%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001205	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003305	Avena fatua rhizosphere microbial communities - H3_Rhizo_Litter_13 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003579	Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003692	Grassland soil microbial communities from Hopland, California, USA - Sample H3_Bulk_42 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010071	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010108	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010109	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010121	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010146	Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012374	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012377	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012390	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012397	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012399	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012404	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012405	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300034002	Biocrust microbial communities from Mojave Desert, California, United States - 16HMC	Environmental	Open in IMG/M
3300034221	Biocrust microbial communities from Mojave Desert, California, United States - 33SMC	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1093778391	3300000955	Soil	MATRNDTNDQSKAADEAAHTARTVTDEAARVGEQTARAGADLARRSTETARDTVQTGLNT
C688J13580_10111852	3300001205	Soil	MSAHSNSTNDQNKAADEAARTARTVTDEAARVGERTARAGADIANRGTEAARNAVESGLNTATQT
C688J14111_100473382	3300001305	Soil	MSAHSNSTNDQNKAADEAARTARTVTDEAARVGERTARAGADIANRGTEAARNAVESGL
C688J14111_101085871	3300001305	Soil	MATRDDTKDQNKAADEAARTARTVTDETARVGDQTARAGADVFRRGSETARDTMQSGLNTATETFQRMTDQFT
C688J18823_102370971	3300001686	Soil	MSTRNDTNDQNKAADEAARTARTVTDEAARVGEQTARAGADIANRSTEATRNAVEAGLNTAT
C688J18823_102958841	3300001686	Soil	MATRNDNNDQNKAADEAARTVRVVTDEAARVGEQTARAGADAFRRSTETARESVQSGLNTATETFQRISDQFTKV
C688J18823_108973721	3300001686	Soil	MATPNDPNDQNKAADEAAPTARTVTNEAARVGEQTARTGADIARRSAETARETLQSGLNTATETFQRI
C688J35102_1194350991	3300002568	Soil	VLFGARVTLDKDDLMPAHSNNTNDQNKAADEAARTARTVTDEAGRVGEQTARAGADVFRRSTETARDNLQSGLNT
C688J35102_1199551651	3300002568	Soil	MATREDTKDQSKAADEAARTARTVTDEAARVGEQTARTGADMARRGTETARDTFQAGLNT
Ga0006770J48903_10520002	3300003305	Avena Fatua Rhizosphere	MVTRDDTKDQNRAADEAARTARTVTDEAARVGEQTARAGADIVNRSTETARNVVEAGLNTATETFQRATDQFT
Ga0007429J51699_10352192	3300003579	Avena Fatua Rhizosphere	MANRDDTKDQSRAADEAARTARTVTDEAARVGEQTARAGADIVNRSTETARNVVEAGLNTATETFQRATDQF
Ga0007426_10377292	3300003692	Avena Fatua Rhizosphere	MVTRDDTKDQNRAADEAARTARTVTDEAARVGEQTARAGADIVNRSTETARNVVEAGLNTATQTFQRATDQFT
Ga0063454_1004685742	3300004081	Soil	MAATRNTNEQIDRTTDEAARTARIVTDEAAHVGEQTARAGADITRRGAEAARDTIQSG
Ga0063454_1016286991	3300004081	Soil	MAIPTAVHRTDTNDQNKAADEAARTARTVPEETARLGEQSARAGADIARRGTETARDTVQAGLNTATETFQRMSDQFT
Ga0063455_1003555942	3300004153	Soil	MPSLCLSYDEDQMTTRNDTNDQTKAADEAARTARTVTDEAARVGEQTARASADLARRSTETARETFQAG
Ga0063455_1006489001	3300004153	Soil	MATRNDNNDQNKAADEAARTVRVVTDEAARVGEQTARAGADAFRRSTETARESVQSG
Ga0062595_1022687051	3300004479	Soil	MASRNDTNEQSKAADEAARTTRAVTDEVARVGERTARAGADVARRGADVARDTFQAGLNTASESFRRV
Ga0062594_1017515261	3300005093	Soil	MSLLDEEDLMATSRDNTPDQNRAADEAAHTARTVTDEAARVGEQTARAGADMARRGTETARDTVQTGLNTASETFQRVTDQFT
Ga0062594_1022905772	3300005093	Soil	RTDMPTRNDNDQNKAADEAARTARTVTDEAARVGEQTARAGAHIANRSTETARARWKRA*
Ga0062594_1031133572	3300005093	Soil	MATPNDTNDQSKAADEAARTARTVTDETALVGEQAARTGADIARRSAETARETLQSGLNTAT
Ga0068868_1014049001	3300005338	Miscanthus Rhizosphere	MATRNDNDHNKAEQNRAADEAARTARTVTDEAARVGEQTARAGADVFRRGSETARDTVQSGLNTATETFQRMSDQ
Ga0068868_1016082772	3300005338	Miscanthus Rhizosphere	MQSFCLSQDEDHMATRNDNDQNRAADEAARTARTVTDEAARVGEQTARAGADIARRGTETARDTFQTGLNTA
Ga0070689_1008265571	3300005340	Switchgrass Rhizosphere	MATRTDTDQNKAADEAARTVTDEAARVGEQTARAGADIANRSTETARSAMEAGLNTATQTFQRA
Ga0070668_1010770491	3300005347	Switchgrass Rhizosphere	MAATRNTNEQIDRTIDEAARTARIVTDEAARVGEQTARAGADITRRGAEAARDTVQSG
Ga0070668_1022498451	3300005347	Switchgrass Rhizosphere	MATRNDNDQNKAADEAARTARTVTDEAARVGEQTARAGADMARRGTETAR
Ga0070674_1014393333	3300005356	Miscanthus Rhizosphere	MSAQSNNTNDQNRAADEAARTARIVTDEAARVGEQTARAGADMARRGTETARDTFQSGLNTA
Ga0070673_1013222011	3300005364	Switchgrass Rhizosphere	MERLCLSLKRIFMATRNDADQNKAADETARTARTVTDEAARVGEQTARAGADLANRGTETVRNVVEAGLNT
Ga0070662_1018771041	3300005457	Corn Rhizosphere	MATPNDTNDQSKAADEAARTARTVTDETALVGEQAARTGADIARRSAETARETLQSGLNTATETFQRITDQ
Ga0068867_1001704591	3300005459	Miscanthus Rhizosphere	MATRNDNNDQNKAEQNKAADEAARTARTVTNEATRVGEQTARAGADVFRRGAETARDSLQSGLNTATET
Ga0070665_1017468601	3300005548	Switchgrass Rhizosphere	MATRNDTNEENKAGNEAARTTRTVTDEAARVGEQAARAGADVARRGAETARDTFQAGLNT
Ga0070702_1016023831	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MATRNDHDQNKAADEAARTARTVTDEAARVGEQTARAGADMARRGTETARDTFQTGLNTASETFQRMS
Ga0068861_1023772172	3300005719	Switchgrass Rhizosphere	MATRNDNDQNRAADEAARTARTVTDEAARVGEQTARAGADIARRGTEAARNA
Ga0068851_103227381	3300005834	Corn Rhizosphere	MATRNDNNDQNKAEQNKAADEAARTARTVTDEAARVGEQTARAGADVFRRSTETARDGLQQG
Ga0068860_1021670031	3300005843	Switchgrass Rhizosphere	MATRDDTKDQSKAADEAARTARTVTDEAARVGEQTARAGADMARRGSETARDTFQSGLNTASETFQ
Ga0079219_117852962	3300006954	Agricultural Soil	MTTRNDNNDQNKAADEAARAARTVTDEAARVGEQSARAGADIARRSTETARDTFQSGLNTANE
Ga0105245_109364611	3300009098	Miscanthus Rhizosphere	MATPNDTNDQSKAADEAARTARTVTDETALVGEQAARTGADIARRSAETARETLQSGLNTATQSFQRITDQFTQV
Ga0105245_109564691	3300009098	Miscanthus Rhizosphere	MSAHSNNTNEQSKAEQNRAADEAARTARTVTDEAARVGEQTARAGADLANRGTETVRNV
Ga0105247_107535841	3300009101	Switchgrass Rhizosphere	MATRNDNDQTKAADEAARTARTLTDEVARVGEQTARAGADLANRGTETVRNVVEAGLNTATQTFQR
Ga0105247_118522412	3300009101	Switchgrass Rhizosphere	MSAQSNNTNDQNRAADEAARTARIVTDEAARVGEQTARAGADVTRRGVETARDTFQTGLNTASETFQRLSDQFT
Ga0105248_101798255	3300009177	Switchgrass Rhizosphere	MSAQSNNTNDQNRAADEAARTARIVTDEAARVGEQAARAGADMARRGTETARVTFQSGLNTATETFQRMSD
Ga0105249_105429952	3300009553	Switchgrass Rhizosphere	MATRNDTNDQTNKAADAARNATDEAARTARTMTDEAARVGEQSARAGADIARRSTETACDTFQAGLNTA
Ga0105249_119862962	3300009553	Switchgrass Rhizosphere	MATRNDNDQNKAADEAARTARTVTDEAARVGEQTARAGADIANRGTETARDTFQAGLNTA
Ga0105249_134139111	3300009553	Switchgrass Rhizosphere	MPAYSNNTNDQNKAADEAARTARTVTDEAARVGEQTARAGADVFRRGTETARDNLQSGLNTATQSFQRINDQF
Ga0126307_101200252	3300009789	Serpentine Soil	MATRNDNDQNKAADEAARTARTVTDEAARVGEQTARAGADIANRGTEAARNAVETG
Ga0126307_103094671	3300009789	Serpentine Soil	MPAHSNDTDEQNKAADEAARTARTVADEAGRVGEQTARAGADVFRRGAETARDNLQSGLNTATQS
Ga0126307_103337461	3300009789	Serpentine Soil	MATRNDNDQNKAADEAARTARTVTDEAARVGEQTARAGADIANRGTKAARNAMEA
Ga0126307_111724281	3300009789	Serpentine Soil	MQSFCLSHDEDHMATRNDTNDQNKADQNKAADEAARTARTVTNEAARVGEQTARAGADMARRGAETARDTVQSGLNTASETFQRVT
Ga0126307_114801151	3300009789	Serpentine Soil	MLVAKTTLGEEDHMPAHRDNTNDQNKAADEAARTARTVTDEAARVGEQTTRAGADVFRRGTETARDTMQSG
Ga0126313_105229932	3300009840	Serpentine Soil	MPAQGNNTNEHNKTEQNKAADEAARTARTVADETARVGEQTARAGADMARRGT
Ga0126313_109899551	3300009840	Serpentine Soil	MAAPTPIHRNDTNDQNKAADEAARTARTVTDEAARVGEQTARAGADIARRGTETAR
Ga0126313_110356231	3300009840	Serpentine Soil	MATRNDNDQSKAADEAARTARTVTDEAARVGEQTARAGADVLRRSTETTRDTFQA
Ga0126313_112748262	3300009840	Serpentine Soil	MEMATRDHTKDQKKAADEAARTARTVTDEAAGMGEQAAGAGADVFRRSTETA
Ga0126305_108851392	3300010036	Serpentine Soil	MKMATRNDTNEQTKAADEATRTARTVTDETARVAEQTARVGADMARRGTETAQNIVES
Ga0126305_110389331	3300010036	Serpentine Soil	MATRNDNDQNKAADEAARTARTVTDEAARVGEQTARAGADIANRGTEAARNAVEAGLNTARETFQRT
Ga0126304_102601853	3300010037	Serpentine Soil	MLVANTTLDEEDHMATPRDNTNDQTKAADEAARTARTVTDEAARVGEQTTRAGADVFRRGTETARDTMQQGLNTATET
Ga0126304_104835831	3300010037	Serpentine Soil	MDMTTRNDNNDQINKAADAGRNATEEAARTARTVTDEAARVGEQTARAGADIANRGTE
Ga0126304_106061412	3300010037	Serpentine Soil	MATRNDNNDQNKAEQNKAADEAARTARTVTDEAARVGEQTARAGADVFRRGAET
Ga0126304_110456391	3300010037	Serpentine Soil	MATRNDNDQNKAADEAARTARTVTDEAARVGEQTARAGADIANRGTEAARNAVETGLNTARET
Ga0126304_111037621	3300010037	Serpentine Soil	MEMATRDHTKDQKKAADEAARTARTVTDEAAGMGEQAARAGADVFRRSTETARDTLQAGLNTASESLQRVTDQVTQA
Ga0126315_104858031	3300010038	Serpentine Soil	MATRNDNDQNKAADEAARTARTVTDEAARVGEQTARAGADIARRGTETARDNLQSGLNTATETFQRMTDQFTKV
Ga0126315_105792951	3300010038	Serpentine Soil	MATRNDNNDQNKAADEAARTARAVTDEAARVGEQTARAGADVFRRSTETARDS
Ga0126315_106694882	3300010038	Serpentine Soil	MATRNDNNDQNKAEQNKVADEAARTARTVTDEAARVGEQTARAGADIANRGTET
Ga0126309_104681201	3300010039	Serpentine Soil	MATRDDTKDQNKAADEAARTARTVTDETARVGDQTARAGADVFRRGSETARDTMQSGLNTATETFQR
Ga0126309_106587302	3300010039	Serpentine Soil	MATRNDNDQNKAADEAARTARTVTDEAARVGEQTARAGADIANRGTEAARNAME
Ga0126309_107086112	3300010039	Serpentine Soil	MRIFMATRNDNNDQNKAEQNKAADEAARTARTVTDEAGRVGEQTARAGADVFRRGAETARDNLQ
Ga0126309_107895002	3300010039	Serpentine Soil	MATHNDTDQNKAADEAARTARTVIDEAARVGEQTARAGADIANRGTETARNVVEAGLNTA
Ga0126309_113054032	3300010039	Serpentine Soil	MRIEMATRNDNNDQNKTADEADRTARTVTDEAARVGEQTTRAGADVFRRGAETARDNLQSGLNTATQTFQRMT
Ga0126308_101672161	3300010040	Serpentine Soil	MLVAKTTLGEEDHMPAPRDNTNDQTKAADEAARTARTVADEAARVGEQTTRAGADVFRRGTETARDTMQSGLNTATET
Ga0126308_109349761	3300010040	Serpentine Soil	MDMATRNDNNDQNKAADEAAHTARTVTDEAARVGEQTARAGADLARRSTETA
Ga0126308_109944381	3300010040	Serpentine Soil	MATRNDNNDQTKAADEAARTVRVVTDEAARVGEQTARAGADIARRGAETARDSLQSGVNMATQG
Ga0126312_107678443	3300010041	Serpentine Soil	MATRNDNDQNKAADEVARTARTVTDEAARVGEQTARAGADMARRGTETARDTFQSGL
Ga0126314_104459732	3300010042	Serpentine Soil	LYEEDLILAHSNNTNEHNKTEQNKAADEAARTARTVTDEAARVGEQTARAGADVFRRGSETARDTVQSGLNT
Ga0126314_113003522	3300010042	Serpentine Soil	MKMATRNDTNEQTKAANEAARTARTVTDETARVAEQTARAGADMARRGTETAQNIVE
Ga0126310_101119841	3300010044	Serpentine Soil	MATRNDNNDQNKADQNKAADETARTVRVVTDEVARVGEQTARAGADAFRRSTETARDNLQSGLNTA
Ga0126310_104784642	3300010044	Serpentine Soil	MDMTSRDDNDQNKAADEAARTARTVTDEAARVGERSARAGADIARRGTETARDALQSGLNTANETFQRMSDQ
Ga0126310_106748842	3300010044	Serpentine Soil	MATRNDINQENKADQNKAADEAALTARTVTDEAARVGEQTARAGADVFRRGSETARDNLQSGLNTATQSFQRVTDQFTQV
Ga0126310_108843011	3300010044	Serpentine Soil	MRIEMTTRNDNDQNKAADEAARTARTVTDEAARVGEQTARAGADIANRGTETARIVVESGLNTATQ
Ga0126310_109997702	3300010044	Serpentine Soil	MPAQRNENNDQNKAADEAARTARTVTDEAARVGEQTARAGADVFRRSTEATRDSLQQGLNTATQSFSV*
Ga0126310_110128201	3300010044	Serpentine Soil	MAASRDNTPDQNRAADEAARTARTVTDEAARLGEQTARAGADIARRGTETARDTVQTGLNTASETFQRMADQFT
Ga0126310_110264651	3300010044	Serpentine Soil	MATPTAVHRNDTNDQHKADQNRAADEAARTARTVTDEAARVGEQSARAGADIARQGTETARDTFQLGLNTATETFQRMSD
Ga0126310_111093232	3300010044	Serpentine Soil	MDMTTHDATKDQKKPADEAARTARTATDEAARMGEQAARAGADVFRRSTETARETMQAGLNTASESLQRATDQFT
Ga0126310_111154571	3300010044	Serpentine Soil	MDMTTRNDNNDQINKAADAGRNATEEAARTARTVTDEAARVGEQTARAGADIANRGTETARNMVQSGLNTATQTFQR
Ga0126310_113094392	3300010044	Serpentine Soil	MDMSTRNDTNDQNKAADEAARTARTVTDEAARVGEQTARAGADIANRGTEAARNAV
Ga0126310_116270752	3300010044	Serpentine Soil	MSTRNDNNDQNKADQNKAADEAARTARTVTNEAARVGEQTARAGADVFRRGSETARDTVQSGLNTATESFQRMSDQFTKVL
Ga0126311_102489141	3300010045	Serpentine Soil	MDMATRNDTTDQNRAADEAARTARTVTDEAARVGEQTARAGADAARRGTETARDTFQSGLNTATETFQRMADQ
Ga0126311_103896222	3300010045	Serpentine Soil	MPAHSNNTNEHNKTEQNKAADEAARTARTVADETARVGEQSARAGADIARRGTETARDTFQSGLNTATETFQRMSD
Ga0126311_116063191	3300010045	Serpentine Soil	MATRNDTNDQNKAADEAARTARTVTNEAARVGEQTARAGADVFRRSTETARESVQSGLNTATQTFQRISDQFTQVLG
Ga0126311_116119491	3300010045	Serpentine Soil	MATRNDTDQNKAADEAARTARTVTDEAARVGEQTARAGADIANRSTETARNTFQSGLNAASETF
Ga0126311_118675071	3300010045	Serpentine Soil	MSEQRNNTNDQNKAADEAARTARTVADEAGRVGEQTARAGADVFRRSTETARD
Ga0126311_118745231	3300010045	Serpentine Soil	MATRNDNNDQNKAEQNKAADEAARTARTVTDEAARVGEQTARAGADVFRRGTETARDNLQ
Ga0127477_1592322	3300010071	Grasslands Soil	MAAPTPIHRNDTTDQNKAADEAARTARTVTDEAARVGEQTARAGADIARRGTETARDTMQSGLNTATETFQRMSDQ
Ga0127474_10706361	3300010108	Grasslands Soil	MATRNDNDQNRAADEAARTARTMTDEAARVGEQSARAGADIARRGTETARDAIQSGLNTASETF
Ga0127497_10543781	3300010109	Grasslands Soil	MAAPTPIHRNDTTDQNKAADEAARTARTVTDEAARVGEHTARAGADMANQGAQTARDTFQSGLNTATE
Ga0127438_10674931	3300010121	Grasslands Soil	MPAHGNATNEQNKAADEAARTARAVTDGAARVGEQTARAGVDVFRRGTETARDNLQSGLNTATQTF
Ga0126320_11762161	3300010146	Soil	MATRNDNDQNKAADEAARTARTVTDEAARVGEQTARAGADVFRRGTETARDNLQSGLNTATQS
Ga0126306_101484603	3300010166	Serpentine Soil	MPAQSNNTNEQNKAADEAARTARTVADEAGRVGEQTARVGADVFRRGTETARDNLQSG
Ga0126306_108652042	3300010166	Serpentine Soil	MLVAKTTLGEEDHMATPRDNTNDQTKAADEAARTARTVTDEAARVGEQTTRAGADVFRRGTE
Ga0126306_111222551	3300010166	Serpentine Soil	MATRNDTNDQNKAADEAARTARTVTDEAARVGEQTARAGADVFRRGTETARDNLQQGLNT
Ga0105239_111385471	3300010375	Corn Rhizosphere	MATPNDTNDQSKAADEAARTARTVTDETALVGEQAARTGADIARRSAETAHETLQSGLNTATETFQRI
Ga0105239_130850012	3300010375	Corn Rhizosphere	MTTRNDNDQNRAADEAARTARTVTDETARVGEQTARAGADIARRSTETARDAFQS
Ga0134127_136229962	3300010399	Terrestrial Soil	MATRNDNEQNKAADEAARTARTVTDEAARVGEQTARAGADMARRGTETARDTFQTGLNTASETFQRLSDQ
Ga0134122_104957221	3300010400	Terrestrial Soil	MTTRNDNDQNRAADEAARTARTVTDEAARVGEQSARAGADIARRGTETARDTFQSGL
Ga0105246_101813044	3300011119	Miscanthus Rhizosphere	MATRNENNDQNRAADETARTARTVTNEAARVGEQTARAGADIARRSTETARDTFQSGLNTANETFQRMSD
Ga0105246_125841601	3300011119	Miscanthus Rhizosphere	MEMTTRNDTDQTKAADEAARTARTVTDEAARVGEQTARAGADIARRGTEAARNAVESGLN
Ga0126317_110379922	3300011332	Soil	MATRDDTKDQNKAADEAARTARTVTDETARVGDQTARAGADVFRRGSETARDTMQSG
Ga0150985_1030033202	3300012212	Avena Fatua Rhizosphere	MAATRNTNEQIDRTTDEAARTARIVTDEAAHVGEQTARAGADITRRGAEAARDTVQSGLNTASETFQ
Ga0150985_1062170981	3300012212	Avena Fatua Rhizosphere	MATRNDNNDQNKVEQNKAADEAARTARTVTNEAARVGEQTARAGADVFRRGAETARDNLQSGLNTATQTFQ
Ga0150985_1094697651	3300012212	Avena Fatua Rhizosphere	MATRNDNDQNKAADEAACTARTVTDEAARVGEQTARAGADIANRGTET
Ga0150985_1118152771	3300012212	Avena Fatua Rhizosphere	MATRNDTNDHNKAEQNRAADEAARTARTVTDEAARVGEQTARAGADVFRRGSETARDTVQSGLNTATETFQRMSDQFTK
Ga0150985_1123425701	3300012212	Avena Fatua Rhizosphere	MATRNDTNDQNKAADEAARTARVVTDGTARVGEQTARAGADVFRRSTETARESVQSGLNTATQTFQR
Ga0150985_1167004492	3300012212	Avena Fatua Rhizosphere	MTTRNDTNDQTKAADEAARTARTVTDEAARVGEQTARASADLARRSTETARETFQAGLDTANETFRRMT
Ga0134039_10084321	3300012374	Grasslands Soil	MATRDDTKDQNKAADEAARTARTVTDEAARVGEQTARAGADVFRRGSETARDTFQTGLNTATETFQRMSDQF
Ga0134029_11411632	3300012377	Grasslands Soil	MATRDDTKDQNRAADEAARTARTVTDEAARVGEQTARAGADIVNRSTETARNVVEAGLNT
Ga0134054_11944551	3300012390	Grasslands Soil	MPAHGNTTNDQNKAADEAARTARTVTDEAARVGEQTARAGADVFRRGAETARDNLQQGLNTANRTF
Ga0134056_13040482	3300012397	Grasslands Soil	MATRDDTKDQNKAADEAARTARTVTDEAARVGEQTARAGADVFRRGSETARDTVQTGLNT
Ga0134061_12988622	3300012399	Grasslands Soil	MAAPTPIHRNDTTDQNKAADEAARTARTVTDEAARVGEQTARAGADIARRGTETARD
Ga0134024_13748521	3300012404	Grasslands Soil	MATRDDTKDQNKAADEAARTARTVTDETARVGDQTARAGADVFRRGSETARDAMQSGLNTATETLQRMADQVTKV
Ga0134041_11605711	3300012405	Grasslands Soil	MPAHSNTAHEQNKAADEAARTARTVTDEAARVGEQTARAGADVFRRGSETARDTVQSGLNTATETFQRMSD
Ga0134045_12375782	3300012409	Grasslands Soil	MATRNDTNEQNKAGNEAARTTRAVTDEAARVGEQAARSGADVARRGAETARDTFQAGLN
Ga0134060_11384192	3300012410	Grasslands Soil	MAVPTPIHRNDTTDQNKAADEAARTARTVTDEAARVGEQTARAGADIARRGTETARDTMQSGLNTATETF
Ga0134060_13361731	3300012410	Grasslands Soil	MATRDDTKDQNKAADEAARTARTVTDEAARVGEQTACAGADVFRRGSETARDTFQAGLNTASETFQRMSDQFTK
Ga0150984_1015304632	3300012469	Avena Fatua Rhizosphere	MDMATRNDTNDQSKAADEAAHTARTVTDEAARVGEQTARAGADLARRSTETAR
Ga0150984_1042387341	3300012469	Avena Fatua Rhizosphere	MATRNDNTDHNKAADEAARTARTVTDEAARVGEQTARAGADMARRGTETARDAFQSGLNTASETFQRMSDQFTKVL
Ga0150984_1056486401	3300012469	Avena Fatua Rhizosphere	MEMTTRNDTDQTKAADEAARTARTVTDEAARVGEQTARAGAEIANR
Ga0150984_1074333871	3300012469	Avena Fatua Rhizosphere	MATRNDNDQNKAADEAACTARTVTDEAARVGEQTARAGADIANRGTETARNV
Ga0150984_1096826341	3300012469	Avena Fatua Rhizosphere	MATRNDTNEENKAGNEAARTTRTVTDEAARVGEQAARVGADVARRGAETARDTFQAGLNT
Ga0150984_1097840093	3300012469	Avena Fatua Rhizosphere	MATRNDNDQNKAADEAARTARTVTDEAARVGEQAARASADIANRGTETARNVVEAGLNTA
Ga0150984_1168926731	3300012469	Avena Fatua Rhizosphere	MDMSTRNDNDQNKAADEAARTARTVTDEAARVGERSARAGADVLRRSTETARDTFQSGLNTAHETFHRPSDQGTPGPGLHG
Ga0150984_1198475941	3300012469	Avena Fatua Rhizosphere	MATRNDNEQNKAADEAARTARTVTDEAARVGEQTARAGADIANRGTEAARNAVEAGLNTATQTFQRVSDQFTK
Ga0164300_100374521	3300012951	Soil	MATRNDTNEQNEAARTTRAVTDETARVGEQTARAGADVAWRGAEVARRGAEVARDTFQTG
Ga0164299_102637322	3300012958	Soil	MKMAIRDDTKEQNKAADEAARTARTVTDEAARAARAGADVLRSSTETARAHNPKSWSAAHPRTCRP*
Ga0157374_110487861	3300013296	Miscanthus Rhizosphere	MTTRNDNDQNRAADEAARTARTVTDEAARVGEQSARAGADIARRSTETARDAFQSGLNTANETFQ
Ga0157374_114679641	3300013296	Miscanthus Rhizosphere	VYVPELLRQGVRMSLLDEEDLMATSRDNTPDQNRAADEAAHTARTVTDEAARVGEQTARAGADMARRGTETARDTFQTGLNTASETFQ
Ga0157378_124696411	3300013297	Miscanthus Rhizosphere	MATRNDTDQTKAADEAARTARTVTDEAARVGEQTARAGAEIANRGAEAARNAVE*
Ga0163162_101509285	3300013306	Switchgrass Rhizosphere	LYEEKLMSAQSNNTNDQNRAADEAARTARTVTDEAARVGEQGARAGADVARRGVETARDA
Ga0163162_103525534	3300013306	Switchgrass Rhizosphere	MATRNDNDQNKAADEAARTARTVTDETARVGEQTARAGADVTRRGVETARDTVQAGLNTATETFQRMSDQFTKVLGF
Ga0163162_115291112	3300013306	Switchgrass Rhizosphere	MDTGNIMATPTPVHRHDTNDENRAADEAARTARTVTDEAARVGEQTTRAVADIARRSTETARDTLQSGLNT
Ga0163162_133925591	3300013306	Switchgrass Rhizosphere	MATRDDTKDQNRAADEAARTARTVTDETARVGEQTARAGADVFRRGSETA
Ga0157375_106685572	3300013308	Miscanthus Rhizosphere	MRIFMATRNDNEQNKAADEAARTARTVTDEAGRVGEQTARAGADIANRSTETARSA
Ga0157375_135234311	3300013308	Miscanthus Rhizosphere	MATRNDNEQNKAADEAARTARTVTDEAARVGEQTARAGADMARRGTETARDTFQTGLNTASETFQR
Ga0157380_121663631	3300014326	Switchgrass Rhizosphere	VYVPELLRQGVRMSLLDEEDLMATSRDNTPDQNRAADEAARTARTVTDEAARVGEQTARAGADMARRSTETARDTFQTGLNSASE
Ga0157379_117054341	3300014968	Switchgrass Rhizosphere	MATRNDNDQNRAADEAARTARTVTDETARVGEQTARAGADVTRRGVETARDTVQAGLNTA
Ga0157376_102536503	3300014969	Miscanthus Rhizosphere	MATRNDTNEQNKAADEAARTTRAVTDEAARVGEQAARAGADVARRGAEVARD
Ga0132257_1027521701	3300015373	Arabidopsis Rhizosphere	MTTRNDNDQNRAADEAARTARTVTDEAARVGEQSARAGADMARRSTETARDAFQAGLNTASETFQRLSDQVTKVLG
Ga0132255_1034798721	3300015374	Arabidopsis Rhizosphere	MPIPTAVHRTDTNDQNKAADEAARTARTVTDETARVGEQAARAGADIARRSTETARATVQSGLNTAGETFQRMADQVTQ
Ga0132255_1037795852	3300015374	Arabidopsis Rhizosphere	MATPNDTDDQSKAADEAVRTARTVTDETALVGEQAARTGADIARRSAETARETLQSGLNTATQSFQHMADQF
Ga0163161_102411094	3300017792	Switchgrass Rhizosphere	MSAQSNNTNDQNRAADEAARTARIVTDEAARVGEQTARAGADMARRGTETARDTFQSGLNTATETF
Ga0190268_112562911	3300018466	Soil	MPAQSNNTNEQNKAADEAARTARTVTDEAARVGEQTARAGADLANRGTQAARDA
Ga0190268_121171431	3300018466	Soil	MATRNDNDQNKAADEAARTARTVTDEAARVGEQTARAGADIANRGTEAARNAVEAGLNTATQTFQRVTDQFT
Ga0190267_103436571	3300019767	Soil	MPAHSNNTNEQNKAADEAARTARTVTDEAARVGEQTARAGADVFRRGSETARDTMQ
Ga0190267_103838981	3300019767	Soil	MATPTPVHRNDINDHNKAEQNRAADEAAHTARTVTDEAARVGEQTARAGADIARRGTEAARDTMQSG
Ga0190267_106906971	3300019767	Soil	MSEQRNNTNDQNKAADEAARTARTVADEAGRVGEQTARAGADVFRRSSETARDSLQSGLNTATQTFQRIND
Ga0206352_105806912	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MAARDDTKDQNKAADEAARTARTVTDEAARVGEQTARAGADIVNRGAETARDVV
Ga0207656_105083531	3300025321	Corn Rhizosphere	MSAQSNNTNDQNRAADEAARTARIVTDEAARVGEQSARAGADMARRGAETARDTMQ
Ga0207688_102782441	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MSAHSNNTNEQNKAADEAARTARTVTDEAARVGEQTARAGADVFRRSTETARDNL
Ga0207688_103407833	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MATRNENTDQNRAADEAARTARTVTDETARVGEQTARAGADIARRSTETARDAFQTGLNTTTETFQRVTDQ
Ga0207688_107459641	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MAATRNTNEQIDRTTDEAARTARIVTDEAARVGEQTARAGADITRRGAEAAGRFCSM
Ga0207687_103674042	3300025927	Miscanthus Rhizosphere	MLDEEDLMATSRDNTNDQNRAADEAARTVADETARVGEQTARAGADIARRNTETARDTVQAGLNAAHQDTLAV
Ga0207669_111790211	3300025937	Miscanthus Rhizosphere	MSAQSNNTNDQNRAADEAARTARIVTDEAARVGEQTARAGADMARRGTETARDTFQSGLNTAT
Ga0207712_109941121	3300025961	Switchgrass Rhizosphere	MATPNDTDDQSKAADEAARTARTVTDETALVGEQAARTGADIARRSAETARETLQSGLNTATQSFQRITDQFTDAA
Ga0207712_113180112	3300025961	Switchgrass Rhizosphere	MATRNDNDQSKAADEAARTARTVTDEAARVGEQTARAGADIANRGTETARDTFQAGLNTA
Ga0207668_103752461	3300025972	Switchgrass Rhizosphere	MAATRNTNEQIDRTTDEAARTARIVTDEAARVGEQTARAGADITRRGAEAARDTVQSGLNTASETFQR
Ga0207678_102371241	3300026067	Corn Rhizosphere	MAATRNTNEQIDRTTDEAARTARIVTDEAARVGEQTARAGANITRRGAEA
Ga0207678_116003571	3300026067	Corn Rhizosphere	MATPNDTNDQSKAADEAARTARTVTDETALVGEQAARTGADIARRSAETARETLQSGLNTASETFQRITDQ
Ga0207708_116583481	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MTTRNENNDQNRAADEAARTARTVTDEAARVGEQTARAGADAARRGAETARDTVQSGLNTATETFQRVTDQ
Ga0207676_108964711	3300026095	Switchgrass Rhizosphere	MATPNDTDDQSKAADEAVRTARTVTDETALVGEQAARTGADIARRSAETARETLQSGLNTATQSFQHMADQFTQVL
Ga0207675_1002778433	3300026118	Switchgrass Rhizosphere	MSAHSNNTNEQNKAADEAARTARTVTDEAARVGEQTARAGADVFRRSTETAR
Ga0268266_106687511	3300028379	Switchgrass Rhizosphere	MSAQSNNTNDQNRAADEAARTARIVTDEAARVGEQTARAGADMARRGTETARDTFQSGLNTATE
Ga0268266_119774951	3300028379	Switchgrass Rhizosphere	MATRNENTDQNRAADEAARTARTVTDETARVGEQTARAGADIARRGTETARNVMEQGL
Ga0308200_11078432	3300030905	Soil	MSTRNDTNDQNKAADEAARTARTVTDEAARAGEQTARAGADIANRGTETARNMVESGL
Ga0308190_10854642	3300030993	Soil	MATRDDTKDQNKAADEAARTARAGADEAARMGEQTARAGADVFRRGTET
Ga0307408_1011006072	3300031548	Rhizosphere	MATRNDNNDQNKAADEAAHTARTVTDEAARVGEQTARAGADLARRSTETARDTVQTGLNTATQ
Ga0334920_020009_1015_1218	3300034002	Hypolithic Biocrust	MANHNGTNEQNKAEQNRAADEAARTARTVTNEAARVGEQTARAGADVFRRGSETARDTVQSGLNTATE
Ga0334937_217879_286_528	3300034221	Biocrust	MATRNDNNDQNKAEQNKAADEAARTARTVTDEAARVGEQTARAGADIANRSTETARNAMEQGLNTANESFRRMADQFNQVL
Ga0314793_060366_525_716	3300034668	Soil	MNMATRDDTKDQNKAADEAARAARTMTDEAARVGEQTARAGADLVNRGTETARNVVEAGLNTAT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F034081

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences