Metagenome Family F033635

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F033635
Family Type	Metagenome
Number of Sequences	177
Average Sequence Length	45 residues
Representative Sequence	MLANVFSNTTPPRVEKAEGVPLLGLALSLCLMAAIAALAFVACAAL
Number of Associated Samples	113
Number of Associated Scaffolds	177

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.14 %
% of genes near scaffold ends (potentially truncated)	36.72 %
% of genes from short scaffolds (< 2000 bps)	89.83 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (32.203 % of family members)
Environment Ontology (ENVO)	Unclassified (35.028 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.588 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.43% β-sheet: 0.00% Coil/Unstructured: 67.57%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 177 Family Scaffolds
PF08042	PqqA	8.47
PF00378	ECH_1	4.52
PF05532	CsbD	2.82
PF04392	ABC_sub_bind	1.69
PF00072	Response_reg	1.13
PF13467	RHH_4	1.13
PF14534	DUF4440	1.13
PF04519	Bactofilin	1.13
PF01068	DNA_ligase_A_M	1.13
PF02203	TarH	0.56
PF00149	Metallophos	0.56
PF08281	Sigma70_r4_2	0.56
PF05362	Lon_C	0.56
PF03781	FGE-sulfatase	0.56
PF00656	Peptidase_C14	0.56
PF00144	Beta-lactamase	0.56
PF13005	zf-IS66	0.56
PF00313	CSD	0.56
PF04828	GFA	0.56
PF05225	HTH_psq	0.56
PF02518	HATPase_c	0.56
PF08241	Methyltransf_11	0.56
PF13340	DUF4096	0.56
PF01527	HTH_Tnp_1	0.56

COG ID	Name	Functional Category	% Frequency in 177 Family Scaffolds
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	2.82
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.69
COG0840	Methyl-accepting chemotaxis protein (MCP)	Signal transduction mechanisms [T]	1.13
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	1.13
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	1.13
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.13
COG0466	ATP-dependent Lon protease, bacterial type	Posttranslational modification, protein turnover, chaperones [O]	0.56
COG1067	Predicted ATP-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.56
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.56
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.56
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.56
COG1750	Predicted archaeal serine protease, S18 family	General function prediction only [R]	0.56
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.56
COG3480	Predicted secreted protein YlbL, contains PDZ domain	Signal transduction mechanisms [T]	0.56
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.56
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	61.58 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	59.32 %
Unclassified	root	N/A	33.33 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	39.55 %
Unclassified	root	N/A	33.33 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.99 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.56 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	39.55 %
Unclassified	root	N/A	33.33 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.21 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	0.56 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	39.55 %
Unclassified	root	N/A	33.33 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.26 %
Rivibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rivibacter	0.56 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	39.55 %
Unclassified	root	N/A	33.33 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.26 %
Rivibacter subsaxonicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rivibacter → Rivibacter subsaxonicus	0.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17037092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1809	Open in IMG/M
2088090014\|GPIPI_17394938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1788	Open in IMG/M
2170459010\|GIO7OMY01ERFZK	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
2170459012\|GOYVCMS02IS25O	Not Available	509	Open in IMG/M
2170459019\|G14TP7Y01C8AW2	Not Available	629	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0469652	Not Available	541	Open in IMG/M
3300001431\|F14TB_103990387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	886	Open in IMG/M
3300002908\|JGI25382J43887_10465184	Not Available	535	Open in IMG/M
3300002911\|JGI25390J43892_10011432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2075	Open in IMG/M
3300004153\|Ga0063455_100915433	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300004463\|Ga0063356_105029395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300004463\|Ga0063356_105538834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300005167\|Ga0066672_10157049	Not Available	1430	Open in IMG/M
3300005172\|Ga0066683_10228499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1151	Open in IMG/M
3300005172\|Ga0066683_10615783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M
3300005178\|Ga0066688_10211310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1234	Open in IMG/M
3300005186\|Ga0066676_10655288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	713	Open in IMG/M
3300005332\|Ga0066388_100010815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7139	Open in IMG/M
3300005332\|Ga0066388_101264948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1268	Open in IMG/M
3300005332\|Ga0066388_105942943	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300005434\|Ga0070709_10598017	Not Available	849	Open in IMG/M
3300005439\|Ga0070711_100152758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1742	Open in IMG/M
3300005445\|Ga0070708_101669291	Not Available	592	Open in IMG/M
3300005447\|Ga0066689_10264065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1062	Open in IMG/M
3300005447\|Ga0066689_10669784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	651	Open in IMG/M
3300005467\|Ga0070706_101252434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	681	Open in IMG/M
3300005468\|Ga0070707_101177650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	732	Open in IMG/M
3300005468\|Ga0070707_101840970	Not Available	572	Open in IMG/M
3300005471\|Ga0070698_100193940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1968	Open in IMG/M
3300005471\|Ga0070698_100691900	Not Available	961	Open in IMG/M
3300005471\|Ga0070698_101553155	Not Available	614	Open in IMG/M
3300005518\|Ga0070699_100015894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6462	Open in IMG/M
3300005518\|Ga0070699_100023393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5322	Open in IMG/M
3300005518\|Ga0070699_100038725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4128	Open in IMG/M
3300005518\|Ga0070699_100151634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2050	Open in IMG/M
3300005536\|Ga0070697_100735294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	871	Open in IMG/M
3300005552\|Ga0066701_10196661	Not Available	1234	Open in IMG/M
3300005552\|Ga0066701_10385267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	867	Open in IMG/M
3300005554\|Ga0066661_10119543	Not Available	1592	Open in IMG/M
3300005568\|Ga0066703_10857550	Not Available	518	Open in IMG/M
3300005713\|Ga0066905_100548080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	970	Open in IMG/M
3300005713\|Ga0066905_100688886	All Organisms → cellular organisms → Bacteria → Proteobacteria	876	Open in IMG/M
3300005713\|Ga0066905_101620756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	593	Open in IMG/M
3300005713\|Ga0066905_101631982	Not Available	591	Open in IMG/M
3300005764\|Ga0066903_100293636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2563	Open in IMG/M
3300005764\|Ga0066903_103094874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	900	Open in IMG/M
3300005764\|Ga0066903_103180089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	888	Open in IMG/M
3300005764\|Ga0066903_103564855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	838	Open in IMG/M
3300005764\|Ga0066903_104585051	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300005764\|Ga0066903_107558209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	560	Open in IMG/M
3300005983\|Ga0081540_1090737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1345	Open in IMG/M
3300006791\|Ga0066653_10756300	Not Available	508	Open in IMG/M
3300006796\|Ga0066665_10142091	All Organisms → cellular organisms → Bacteria → Proteobacteria	1813	Open in IMG/M
3300006797\|Ga0066659_10071722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2268	Open in IMG/M
3300006797\|Ga0066659_10258314	Not Available	1308	Open in IMG/M
3300006844\|Ga0075428_102167910	All Organisms → cellular organisms → Bacteria → Proteobacteria	574	Open in IMG/M
3300006847\|Ga0075431_100716094	Not Available	978	Open in IMG/M
3300006847\|Ga0075431_100900195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	854	Open in IMG/M
3300006852\|Ga0075433_11586774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	565	Open in IMG/M
3300006852\|Ga0075433_11701969	Not Available	543	Open in IMG/M
3300006903\|Ga0075426_10487612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	915	Open in IMG/M
3300009012\|Ga0066710_100844333	Not Available	1406	Open in IMG/M
3300009012\|Ga0066710_103996762	Not Available	552	Open in IMG/M
3300009147\|Ga0114129_10323343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2050	Open in IMG/M
3300009156\|Ga0111538_12555191	Not Available	640	Open in IMG/M
3300009792\|Ga0126374_10623320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	800	Open in IMG/M
3300010043\|Ga0126380_10114504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1651	Open in IMG/M
3300010043\|Ga0126380_10841894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	755	Open in IMG/M
3300010046\|Ga0126384_10560432	Not Available	994	Open in IMG/M
3300010046\|Ga0126384_10795268	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300010323\|Ga0134086_10094046	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300010336\|Ga0134071_10750356	Not Available	519	Open in IMG/M
3300010366\|Ga0126379_11248072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	849	Open in IMG/M
3300010373\|Ga0134128_10730031	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300010375\|Ga0105239_13631011	Not Available	501	Open in IMG/M
3300010396\|Ga0134126_12394255	Not Available	575	Open in IMG/M
3300010398\|Ga0126383_10469463	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300010398\|Ga0126383_11147816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	866	Open in IMG/M
3300010398\|Ga0126383_11431471	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300012198\|Ga0137364_10563553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	858	Open in IMG/M
3300012199\|Ga0137383_10277758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rivibacter → Rivibacter subsaxonicus	1227	Open in IMG/M
3300012199\|Ga0137383_10675917	Not Available	754	Open in IMG/M
3300012199\|Ga0137383_10774582	Not Available	700	Open in IMG/M
3300012199\|Ga0137383_10842793	Not Available	669	Open in IMG/M
3300012200\|Ga0137382_10957283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300012200\|Ga0137382_11303518	Not Available	513	Open in IMG/M
3300012200\|Ga0137382_11320943	Not Available	508	Open in IMG/M
3300012201\|Ga0137365_10036151	All Organisms → cellular organisms → Bacteria	3779	Open in IMG/M
3300012201\|Ga0137365_10062755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2806	Open in IMG/M
3300012201\|Ga0137365_10090495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2304	Open in IMG/M
3300012201\|Ga0137365_10723385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	727	Open in IMG/M
3300012202\|Ga0137363_10366512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1195	Open in IMG/M
3300012202\|Ga0137363_10403123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1139	Open in IMG/M
3300012202\|Ga0137363_10437814	Not Available	1093	Open in IMG/M
3300012204\|Ga0137374_10466041	Not Available	989	Open in IMG/M
3300012204\|Ga0137374_10759519	Not Available	722	Open in IMG/M
3300012205\|Ga0137362_11331848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	603	Open in IMG/M
3300012206\|Ga0137380_11236929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	632	Open in IMG/M
3300012207\|Ga0137381_11126445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	675	Open in IMG/M
3300012208\|Ga0137376_10010796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6528	Open in IMG/M
3300012208\|Ga0137376_11384995	Not Available	594	Open in IMG/M
3300012209\|Ga0137379_10374463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1333	Open in IMG/M
3300012209\|Ga0137379_10981888	Not Available	749	Open in IMG/M
3300012209\|Ga0137379_11824494	Not Available	502	Open in IMG/M
3300012210\|Ga0137378_10283127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1542	Open in IMG/M
3300012210\|Ga0137378_10381151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1309	Open in IMG/M
3300012210\|Ga0137378_10514024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1105	Open in IMG/M
3300012210\|Ga0137378_10587683	Not Available	1023	Open in IMG/M
3300012211\|Ga0137377_10189214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1976	Open in IMG/M
3300012211\|Ga0137377_11485131	Not Available	604	Open in IMG/M
3300012211\|Ga0137377_11491595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	602	Open in IMG/M
3300012211\|Ga0137377_11874268	Not Available	517	Open in IMG/M
3300012350\|Ga0137372_10147036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1928	Open in IMG/M
3300012350\|Ga0137372_10751237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	703	Open in IMG/M
3300012353\|Ga0137367_10210122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1408	Open in IMG/M
3300012354\|Ga0137366_10162652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1677	Open in IMG/M
3300012354\|Ga0137366_10410436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	985	Open in IMG/M
3300012355\|Ga0137369_10385771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1014	Open in IMG/M
3300012356\|Ga0137371_10636738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	818	Open in IMG/M
3300012356\|Ga0137371_10690805	Not Available	781	Open in IMG/M
3300012357\|Ga0137384_10366868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1192	Open in IMG/M
3300012357\|Ga0137384_10970651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	684	Open in IMG/M
3300012357\|Ga0137384_11125715	Not Available	628	Open in IMG/M
3300012357\|Ga0137384_11500032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
3300012357\|Ga0137384_11517197	Not Available	519	Open in IMG/M
3300012359\|Ga0137385_10380518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1205	Open in IMG/M
3300012359\|Ga0137385_11004416	Not Available	688	Open in IMG/M
3300012360\|Ga0137375_11267841	Not Available	559	Open in IMG/M
3300012361\|Ga0137360_11155613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	669	Open in IMG/M
3300012469\|Ga0150984_103973498	Not Available	518	Open in IMG/M
3300012532\|Ga0137373_10891896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	653	Open in IMG/M
3300012917\|Ga0137395_10467436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	907	Open in IMG/M
3300012923\|Ga0137359_10237339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1627	Open in IMG/M
3300012923\|Ga0137359_11209506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	644	Open in IMG/M
3300012923\|Ga0137359_11391971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589	Open in IMG/M
3300012929\|Ga0137404_10956104	Not Available	783	Open in IMG/M
3300012948\|Ga0126375_10913426	Not Available	707	Open in IMG/M
3300012955\|Ga0164298_10056500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1912	Open in IMG/M
3300012961\|Ga0164302_11863522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300012984\|Ga0164309_11286742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	618	Open in IMG/M
3300012984\|Ga0164309_11906589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300012985\|Ga0164308_11799296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	571	Open in IMG/M
3300015264\|Ga0137403_11146279	Not Available	623	Open in IMG/M
3300016294\|Ga0182041_11219849	Not Available	686	Open in IMG/M
3300016294\|Ga0182041_11687652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M
3300016404\|Ga0182037_11078957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	702	Open in IMG/M
3300016422\|Ga0182039_11865313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	551	Open in IMG/M
3300016422\|Ga0182039_12015218	Not Available	531	Open in IMG/M
3300016445\|Ga0182038_10996712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	742	Open in IMG/M
3300018061\|Ga0184619_10341947	Not Available	683	Open in IMG/M
3300018073\|Ga0184624_10433577	Not Available	579	Open in IMG/M
3300018431\|Ga0066655_10901994	Not Available	604	Open in IMG/M
3300018433\|Ga0066667_11187363	Not Available	663	Open in IMG/M
3300018468\|Ga0066662_11063544	Not Available	806	Open in IMG/M
3300018468\|Ga0066662_11944913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	615	Open in IMG/M
3300021168\|Ga0210406_10620033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	842	Open in IMG/M
3300022756\|Ga0222622_11147593	Not Available	572	Open in IMG/M
3300025910\|Ga0207684_10119669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2257	Open in IMG/M
3300025918\|Ga0207662_11210341	Not Available	537	Open in IMG/M
3300026277\|Ga0209350_1010859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2944	Open in IMG/M
3300026310\|Ga0209239_1004114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8402	Open in IMG/M
3300026310\|Ga0209239_1004327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8173	Open in IMG/M
3300026326\|Ga0209801_1230646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	719	Open in IMG/M
3300026538\|Ga0209056_10166547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1661	Open in IMG/M
3300026551\|Ga0209648_10156783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1790	Open in IMG/M
3300027654\|Ga0209799_1042398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1015	Open in IMG/M
3300028878\|Ga0307278_10047839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1938	Open in IMG/M
3300031719\|Ga0306917_10096038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2116	Open in IMG/M
3300031744\|Ga0306918_10960225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	665	Open in IMG/M
3300031771\|Ga0318546_10548143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	812	Open in IMG/M
3300031833\|Ga0310917_10262584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1164	Open in IMG/M
3300031947\|Ga0310909_10839032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	757	Open in IMG/M
3300032001\|Ga0306922_11485263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	678	Open in IMG/M
3300032076\|Ga0306924_12475688	Not Available	521	Open in IMG/M
3300032180\|Ga0307471_102922849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	606	Open in IMG/M
3300032261\|Ga0306920_102009989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	809	Open in IMG/M
3300033289\|Ga0310914_10486656	Not Available	1116	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.09%
Host-Associated	Host-Associated	7.34%
Engineered	Engineered	0.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.40%
Plants	Host-Associated → Plants	7.34%
Aquatic	Environmental → Aquatic	1.69%
Solid Waste	Engineered → Solid Waste	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.65%
Sediment	Environmental → Aquatic → Sediment	1.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.69%
Grass	Engineered → Solid Waste → Grass	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.32%
Loam	Environmental → Terrestrial → Soil → Loam	18.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.56%
Composting	Engineered → Solid Waste → Grass → Composting	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	19.21%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.69%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.56%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	32.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.30%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.13%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.13%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.13%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.13%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.13%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.13%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.56%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.56%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.56%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.56%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
2170459012	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO1O1 lysis Rhizosphere grass	Environmental	Open in IMG/M
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01058020	2088090014	Soil	MLANVYSNTARVEKAEGVPLLGLALSLCFMAAIAALAFLACAAL
GPIPI_01130340	2088090014	Soil	MLANVYSNTAHVEKAEGVPLLGLALSLCFMAAIAALAFLACAAL
F62_05015620	2170459010	Grass Soil	SNTTTTPRVEEAEGVPLLGLALSLCLMAAIAALAFVACAAL
N56_06702350	2170459012	Grass Soil	NVFSNTTPARAEKAKGAPLLDLVLSLCLMAAIAALAFLACAAL
4MG_00586930	2170459019	Switchgrass, Maize And Mischanthus Litter	MLANVFSNTTPPRVEKAEGVPLLGLALSLCLMAAIAALAFVACAAL
ICChiseqgaiiDRAFT_04696521	3300000033	Soil	MLANVYSNTARVEKAEGVPLLGLALSLCFMAAIAALAFLACAAL*
F14TB_1039903872	3300001431	Soil	MLVNVLSNTTPPRVKTAEGVSIVGLALSLSFMAAIAALAFVACAGL*
JGI25382J43887_104651841	3300002908	Grasslands Soil	MLANVFSNSTPPRVEKAEGVPLLGLALSLCLMAAIAALAFVACAAL*
JGI25390J43892_100114322	3300002911	Grasslands Soil	MLASLFSNTTPPRVEKAEGVPLVGLALSLCLMAAIAALAFVACAAI*
Ga0063455_1009154332	3300004153	Soil	MLANVFSDTTPPRVENAEGVPLLGLALSVMLMAAIATLAFVACAAL*
Ga0063356_1050293951	3300004463	Arabidopsis Thaliana Rhizosphere	MLANVFSNTTTPRVEKAEGVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0063356_1055388341	3300004463	Arabidopsis Thaliana Rhizosphere	MLANVFSNTTTTRVEEAEGVPLLGLALSLCLMAAIAGLAFVACAAL*
Ga0066672_101570491	3300005167	Soil	VFSNTTPPRVEKAEGVPLLGLALSLCVMAAIAALAFVACAAL*
Ga0066683_102284991	3300005172	Soil	MLANVFSNNTTPTRVEKAEGLPLLGLVLSLALMAAIAALAFVACAGL*
Ga0066683_106157832	3300005172	Soil	MLANVFSSTTPARVEKAEGVPLLGLALGLCFMAAIAALAFVACAAL*
Ga0066688_102113103	3300005178	Soil	MLANVFSNTTPARAEKAKGAPLLDLVLSLCFMAAIAALAFLACAAL*
Ga0066676_106552881	3300005186	Soil	EGRMLANVFSNNTTPPRVEKAEGVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0066388_1000108155	3300005332	Tropical Forest Soil	MLANVFSNTTPPRVEKAEGVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0066388_1012649483	3300005332	Tropical Forest Soil	MLVNVFSNTTPPRVKTAEGVSIVGVAALTLSFMAAIVALASVACAGL*
Ga0066388_1059429432	3300005332	Tropical Forest Soil	MLVNLFSNDTTPPRVKTAEGVSIVDVALTLSFMAAIVALVFVACAGL*
Ga0070709_105980171	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLANVYSNTARVEKAEGVPLLGQALSLCFMAAIAALAFLACAAL*
Ga0070711_1001527582	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MLANVYSNTAHVEKAEGVPLLGLALSLCFMAAIAALAFLACAAL*
Ga0070708_1016692912	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLANVFSDTTPPRVEKAEGVPLLGLALSLCVMAAIAALAFVACAAL*
Ga0066689_102640651	3300005447	Soil	LIPEAEIGRGIMLANVFSNTTAPRVEKAEDVPLLGLALNLCLMAAIAALAFVACAAL*
Ga0066689_106697841	3300005447	Soil	MLANVFSNTTPPRVEKAEGVPLLGLALSLCVMAAIAALAFVACAAL*
Ga0070706_1012524342	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MLANVFSNTTQPRVKDAEGVPLLGLALSLSLMAAIAALAFVACAAL*
Ga0070707_1011776503	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MLANVFSNTTPPRVEEAEGVPLLGFALSLCLMAAIAALAFVACAAL*
Ga0070707_1018409702	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MLAVFSNTTPPRVEKAEGVPLLGLALSLCVMAAIAALAFVACAAL*
Ga0070698_1001939404	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MLAVFSNTTPPRVEKAEGVPLLGLALSLCVMAAIAALAFVACSAL*
Ga0070698_1006919003	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	RNREGRMLANVFSNTTPPRVEEAEGVPLLGFALSLCLMAAIAALAFVACAAL*
Ga0070698_1015531552	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MLANVFSNTTPPRVEKAEGVPLLGLALSLCLMTAIVALAFVACAAL*
Ga0070699_1000158949	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MLANVFSNTTPPRVEKAEGVPLLGLALSLSLMAAIAALAFVACAAL*
Ga0070699_1000233937	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MLANVFSNSTPPRVEKAEDVPLLGLVLSLCLMAAIAALAFVACAAL*
Ga0070699_1000387251	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MLANVFSNTTPPRVEKAEGVPLVGLALSLCLMAAIAALAFI*
Ga0070699_1001516341	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VLANVFSNTTPPRVEKAEGVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0070697_1007352941	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MLANVFSNTTTTRVEEAEGVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0066701_101966611	3300005552	Soil	MLANVFSNTTTPPRVEEAEGVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0066701_103852672	3300005552	Soil	MLANVFSNTTPPRVEKAEGVPLLGLALSLCVMAAISALAFVACAAL*
Ga0066661_101195434	3300005554	Soil	RNREGRMLANVFSNTTPPRVEKAEGVPLLGLALSLCVMAAISALAFVACAAL*
Ga0066703_108575501	3300005568	Soil	ANVFSNTTPARAEKAKGAPLLDLVLSLCFMAAIAALAFLACAAL*
Ga0066905_1005480802	3300005713	Tropical Forest Soil	MLVNLFSNDTTVPRVKTAEGVSIVDVALTLSFMAAIVALVFVACAGL*
Ga0066905_1006888861	3300005713	Tropical Forest Soil	MVANVFSNTTPPRVKGGEGVPLMGLALSLTLMAAIAALAFLACAAL*
Ga0066905_1016207561	3300005713	Tropical Forest Soil	MLVNVLSNTTPPRVKTAEGVSIVGLALSLSFMAAIVALAFVACAGL*
Ga0066905_1016319821	3300005713	Tropical Forest Soil	VFSNTTPPRVKTAEGVSIVGVAALTLSFMAAIVALAFVACAGL*
Ga0066903_1002936367	3300005764	Tropical Forest Soil	MLVNLFSNDTTLPRVKTAEGVSIVDVALTLSLMAAIVA
Ga0066903_1030948743	3300005764	Tropical Forest Soil	MLVNVLSNTTPPCVKTAEGVSIVGLALSLSFMAAIVALAFVACAGL*
Ga0066903_1031800892	3300005764	Tropical Forest Soil	MLVNVFSNTTPPRVKTAEGAPIAGLALSLFFMAAVVALAFVAC
Ga0066903_1035648552	3300005764	Tropical Forest Soil	MLANVFSNTTTTRVEKAEGVPLLAAIAALAFVACAAL*
Ga0066903_1045850511	3300005764	Tropical Forest Soil	GEGRMLVNVFSNTTPPRVKTAEGVSIVGVALTLSFMAAIVALAFVACAGL*
Ga0066903_1075582091	3300005764	Tropical Forest Soil	MLVNVFSNNTAPPRVNTAEGVPIASIALALSFMAAIVALAFIACAAL*
Ga0081540_10907372	3300005983	Tabebuia Heterophylla Rhizosphere	MLVNVFSNTPHGEKAEGVPLLGLALSLCFMAAIAALAFLACAAL*
Ga0066653_107563001	3300006791	Soil	SNTTPPRVEKAEGVPLLGLALSLCLMAAIAALAFVACAGL*
Ga0066665_101420913	3300006796	Soil	MLANVFSNTTPPRVEKAEGVPLLGLALNLCVMAAIAVLAFVACAAL*
Ga0066659_100717221	3300006797	Soil	MLANVFSNTTPPRVEKAEGVPLVGLALSLCLMAAIAALAFVACGAL*
Ga0066659_102583143	3300006797	Soil	FSNTTPPRVEKAEGVPLLGLALSLRVMAAISALAFVACAAL*
Ga0075428_1021679101	3300006844	Populus Rhizosphere	RNREGRMLANVFSNTTPPRVEKAEGVPLLGLALSLCLVAAIAALAFVACAAL*
Ga0075431_1007160943	3300006847	Populus Rhizosphere	MLANVFSNTTTPPRVEKAEGVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0075431_1009001953	3300006847	Populus Rhizosphere	MLANVFSSTTPARVEKVEGVPLLGLALSLCLVAAIAALAFVACAAL*
Ga0075433_115867743	3300006852	Populus Rhizosphere	TGGRNREGRMLANVFSNTTPPRVEKAEGVPLLGLALSLCLMTAIVALAFVACAAL*
Ga0075433_117019692	3300006852	Populus Rhizosphere	VFSNTTTTPRVEEAEGVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0075426_104876121	3300006903	Populus Rhizosphere	MLANVFSNTTPPRVEKAEGVPLLGLALSLCVMAAIAALAFV
Ga0066710_1008443331	3300009012	Grasslands Soil	REGRMLANVFSNTTPPRVEKAEGVPLLGLALSLCVMAAISALAFVACAAL
Ga0066710_1039967621	3300009012	Grasslands Soil	FSNTTPPRVEKAEGVPLLGLALSLCLMTAIVALAFVACAAL
Ga0114129_103233432	3300009147	Populus Rhizosphere	MLANVFSNTTPPRVEKAEGVPLVGLALSLCLMAAIAALAFVACGTLII*
Ga0111538_125551912	3300009156	Populus Rhizosphere	MLANVFSNNTTPPRVEKAEGVPLLGLALSLCLMTAIVALAFVACAAL*
Ga0126374_106233201	3300009792	Tropical Forest Soil	MLVNLFSNDTTLPRVKTAEGVSIVDVALTLSLMAAIVALVFVACAGL*
Ga0126380_101145043	3300010043	Tropical Forest Soil	MLVNVFSNTTPPRVKTAEGVSIVGVAALTLSFMAAIVALAFVACAGL*
Ga0126380_108418943	3300010043	Tropical Forest Soil	LANVFSNTTPPRVEKAEGVPQLGLALSLCLMAAIAALAFVAARRFNT*
Ga0126384_105604322	3300010046	Tropical Forest Soil	MLVNLFSNDTTVPRVKTAEGVSIVDVALTLSLMAAIVALVFVACAGL*
Ga0126384_107952682	3300010046	Tropical Forest Soil	MLVNVFSNTTPPRVKTAEGVSIVGVALTLSFMAAIVALAFVACAGL*
Ga0134086_100940464	3300010323	Grasslands Soil	MLANVFSNNTTPARVEKAEGVPLLCLALSLSLMATIAALAFVACAAL*
Ga0134071_107503561	3300010336	Grasslands Soil	MLANVFSNTTPPRVEKAEGVPLLGLALNLCLMAAIAALAFVACAAL*
Ga0126379_112480721	3300010366	Tropical Forest Soil	MLVNVFSNTTPPRVKTAEGVSIVGVAALTLSFMAAIVALAFVACAG
Ga0134128_107300311	3300010373	Terrestrial Soil	MLANFFSNTTPPRVENAEGVPLLGLALSVMLMAAIATLAFVACAAL*
Ga0105239_136310111	3300010375	Corn Rhizosphere	MLANVYSNTARVEKAEGVPLLGLALSLCFMAAIAAL
Ga0134126_123942552	3300010396	Terrestrial Soil	ETGVEIGRGSMLANVYSNTAHVEKAEGVPLLGLALSLCFMAAIAALAFLACAAL*
Ga0126383_104694632	3300010398	Tropical Forest Soil	VNVFSNDTTPPRVNTAEGVPIASIALALSFMAAIVALAFIACAAL*
Ga0126383_111478161	3300010398	Tropical Forest Soil	MLANVFSNTTPPRVEKAEGVPQLGLALSLCLMAAIAALAFVACAAL*
Ga0126383_114314712	3300010398	Tropical Forest Soil	MLVNIFSNTTPPRVKTAEGVSIVGVALTLSFMAAIVALAFVACAGL*
Ga0137364_105635532	3300012198	Vadose Zone Soil	MLASLFSNTTPPRVEKAEGVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0137383_102777581	3300012199	Vadose Zone Soil	MLANVFSNTTPPRVEKAEGVPLLGLALSLCFMAAIAALAFVACAAL*
Ga0137383_106759172	3300012199	Vadose Zone Soil	MLANVFSDTTPPRVEKAEGVPLLGLALSLCVMAAISALAFVACAAL*
Ga0137383_107745821	3300012199	Vadose Zone Soil	MLANVFSNTTPARVEKAKGAPLLDLVLSLCLMAAIAALAFLACAAL*
Ga0137383_108427931	3300012199	Vadose Zone Soil	MLANVFSNTTPPHAAGVSLFGLALSLSFMAVIAALAFVACAAL*
Ga0137382_109572831	3300012200	Vadose Zone Soil	TPPRVEKAEGVPLLGLALSLCVMAAIAALAFVACAAL*
Ga0137382_113035181	3300012200	Vadose Zone Soil	MLANIFSNTTPARVEKAEGAPLLDLVLSLCLMAAMAALALLARGAL*
Ga0137382_113209431	3300012200	Vadose Zone Soil	MLANVFSNTTPPRVEKAEGVPLIGLALSLCLMAAIAALAFVA
Ga0137365_100361512	3300012201	Vadose Zone Soil	MLANVFSNTTPPRVEKAGVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0137365_100627552	3300012201	Vadose Zone Soil	MLANVFSNTTTSPRVEEAEGVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0137365_100904953	3300012201	Vadose Zone Soil	MLANVFSSTTPARVEKAEGVPLLGLALSLCFMAAIAALAFVACAAL*
Ga0137365_107233851	3300012201	Vadose Zone Soil	MLANVFSNTTPPRVEKAEGVPLLGLALSLCLMAAIAALAFVACAGL*
Ga0137363_103665122	3300012202	Vadose Zone Soil	MLAVFSNTTPPRVEKAEGVPLLGLALSLCVMAAISALAFVACAAL*
Ga0137363_104031231	3300012202	Vadose Zone Soil	MLANVFSNNTTPPRVEKAEGVPLLGLALSLCLMAAVAALAFVACAAL*
Ga0137363_104378141	3300012202	Vadose Zone Soil	MLANVFSNTTPARAEKAKGAPLLDLVLSLCLMAAIAALAFLACAAL*
Ga0137374_104660411	3300012204	Vadose Zone Soil	GRMLANVFSNTTPTRAEKAKGAPLLDLVLSLCFMAAIAALAFLACAAL*
Ga0137374_107595192	3300012204	Vadose Zone Soil	MLANVFSNTTPARAEKAKGAPLLDLVLSLCLMAVIAALAFLACAAL*
Ga0137362_113318482	3300012205	Vadose Zone Soil	GIMLANVFSNTTPPRVEKAEGVPLLGLALSLCLMAAVAALAFVACAAL*
Ga0137380_112369291	3300012206	Vadose Zone Soil	MLANVFSNTTTTPRVEEAEGVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0137381_111264452	3300012207	Vadose Zone Soil	MFANVFSNMTPSREEKDEGVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0137376_100107967	3300012208	Vadose Zone Soil	MLANVFSNNTTPARVEKAEGVPLLGLALSLSLMATIAALAFVACAAL*
Ga0137376_113849951	3300012208	Vadose Zone Soil	MLANVFSNTTPPRVEKDEGVPILGLALSLCLMAAIAALAFIACAAF*
Ga0137379_103744631	3300012209	Vadose Zone Soil	MFANVFSNMTPPREEKDEGVPLLGLALSLCVMAAIAALAFVACA
Ga0137379_109818881	3300012209	Vadose Zone Soil	TPPRVEKAEGVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0137379_118244942	3300012209	Vadose Zone Soil	MLANVFSNNTTPPRVEKAEGVPLLGLALSLCVMAA
Ga0137378_102831272	3300012210	Vadose Zone Soil	MLANVFSNTTTTTRVEEAEGVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0137378_103811513	3300012210	Vadose Zone Soil	VFSNTTPTRAEKAKGAPLLDLVLSLCFMAAIAALAFLACAAL*
Ga0137378_105140242	3300012210	Vadose Zone Soil	MFANVSSNMTPPREEKDEGVPLLGLALSLCLMAAIADLAFVACAAL*
Ga0137378_105876831	3300012210	Vadose Zone Soil	MLANVFSNTTPPRVEEAEGVPLLGFALSLCLMAAIA
Ga0137377_101892142	3300012211	Vadose Zone Soil	MFANVFSNMTPPREEKDEGVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0137377_114851312	3300012211	Vadose Zone Soil	MLANVFSNTTPTRAEKAKGAPLLDLVLSLCLMAAIAALAFLACAAL*
Ga0137377_114915952	3300012211	Vadose Zone Soil	MLANVFSNTTSPRVEKAEGVPLLGLALSLRLMAAIAALAFVACAAL*
Ga0137377_118742682	3300012211	Vadose Zone Soil	MLANVFSNTTTTPRVEKAESVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0137372_101470361	3300012350	Vadose Zone Soil	MLANVFSDTTPPRVEKAEGVPLLGLALSLCVMAAI
Ga0137372_107512373	3300012350	Vadose Zone Soil	DREGRMLANVFSNTTTTPRVEEAEGVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0137367_102101221	3300012353	Vadose Zone Soil	MLANVFSNTTTTPRDEEAEGVPLLGLALSLCLMAA
Ga0137366_101626521	3300012354	Vadose Zone Soil	MIANVFSNTTTPPRVEEAEGVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0137366_104104362	3300012354	Vadose Zone Soil	MLANVFSNTTPPRVEKDEGLPLLGLALNLCLMAAIAALAFIACAAF*
Ga0137369_103857712	3300012355	Vadose Zone Soil	MLANVFSNNTTPPRVEKAEGVPLIGLALSVCLMAAIAALAFVACAAL*
Ga0137371_106367382	3300012356	Vadose Zone Soil	MLANVFSNNTTPPRVEKAEGVPLIGLALSLCLMAAIAALAFVACAAL*
Ga0137371_106908052	3300012356	Vadose Zone Soil	MLANVFSNTTTTPRVEKAESVPLLGLALSLCLMAAIAARAFVACAAL*
Ga0137384_103668683	3300012357	Vadose Zone Soil	LANVFSNTTTTPRVEKAESVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0137384_109706511	3300012357	Vadose Zone Soil	MLANVFSNNTTPPRVEKAEGVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0137384_111257152	3300012357	Vadose Zone Soil	MFANVFSNMTPPREEKDEGVPLLGLALSLCLMAAIAALAFIACAAF*
Ga0137384_115000322	3300012357	Vadose Zone Soil	RDREGRMLANVFSNTTTSPRVEEAEGVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0137384_115171972	3300012357	Vadose Zone Soil	MLANVFSNTTTTTRVEEAEGVPLLGLALSLCLMAAIAALAFVACAA
Ga0137385_103805181	3300012359	Vadose Zone Soil	MFANVFSNMTPPREEKYEGVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0137385_110044161	3300012359	Vadose Zone Soil	MLANVFSNTTPPRVEKAEGVPLVGLALSLCLMAAIAALAFVACAAL*
Ga0137375_112678411	3300012360	Vadose Zone Soil	MLANVFSSTTPARVEKAEGVPLLGLALSLCFMAAIAALAFLACAAL*
Ga0137360_111556131	3300012361	Vadose Zone Soil	NVFSNTTTPPRVEEAEGVPLLGLALSLCLMVAIAALAFVACAAL*
Ga0150984_1039734982	3300012469	Avena Fatua Rhizosphere	MLANVFSNTTPPRVENAEGVPLLGLALSVMLMAAIATLAFVACAAL*
Ga0137373_108918961	3300012532	Vadose Zone Soil	MLANVFSNNTTPARVEKAERVPLLGLALSLSLMAAIAALAFVACAAL*
Ga0137395_104674361	3300012917	Vadose Zone Soil	MLANVFSNTTPPRVEKAEGVPLLGLALSLCLMAAIAALAFLACAAL*
Ga0137359_102373391	3300012923	Vadose Zone Soil	VFSNTTPPRVEKAEGVPLLGLALSLCVMAAISALAFVACAAL*
Ga0137359_112095061	3300012923	Vadose Zone Soil	APRAEMDEGVPLLGLALTLCLIAAITALAFVACAAL*
Ga0137359_113919712	3300012923	Vadose Zone Soil	TPRVEKAEGVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0137404_109561042	3300012929	Vadose Zone Soil	MLANVFSNTTPARAEKAKGAPLLDLVLSLCFMAAIAALAFVACAGL*
Ga0126375_109134262	3300012948	Tropical Forest Soil	PPRVKTAEGVSIVGVAALTLSFMAAIVALAFVACAGL*
Ga0164298_100565002	3300012955	Soil	MLANVFSNTTPPRAENAEGVPLLGLALSVMLMAAIATLAFVACAAL*
Ga0164302_118635222	3300012961	Soil	MHANVFSNTTTPRVEKAEGVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0164309_112867422	3300012984	Soil	MLANVFSNTTPPRAEHAEGVPLLGLALSVMLMAAIATLAFVACAAL*
Ga0164309_119065891	3300012984	Soil	ANVFSNTTTPRVEKAEGVPLLGLALSLCLMAAIAALAFVACAAL*
Ga0164308_117992962	3300012985	Soil	MLVNVFSNDTTPPRVNTAEGVPIASIALALSFMAAIVALAFIA
Ga0137403_111462791	3300015264	Vadose Zone Soil	HAEKAKGAPLLDLVLSLCLMAAIAALAFLACAAL*
Ga0182041_112198492	3300016294	Soil	MLVNVFSNTTPPRVKSAEGVSIVGVALTLSFMAAIVALAFVACAGL
Ga0182041_116876521	3300016294	Soil	MLANVFSNTTTTRVEKAEGVPLLTAIAALAFVACAAL
Ga0182037_110789571	3300016404	Soil	MLVNVFSNTTPPRVKTAEGVSIVGVALTLSFMAAIVALAFVACA
Ga0182039_118653131	3300016422	Soil	GRMLVNVFSNTTPPRVKTAEGVSIVGVALSLSLMAAIVALAFVACAGL
Ga0182039_120152181	3300016422	Soil	FDDTTPPRVKTAEGVPIVGLALTLSFMVAIAALAFVACAVL
Ga0182038_109967121	3300016445	Soil	MLVNVFSNTTPPRVKTAEGVSIVGVALSLSLMAAIVALAFVACAGL
Ga0184619_103419471	3300018061	Groundwater Sediment	RGRNREGRMLANVFSNTTTPPRVEKAEGVPLLGLALSLCLMAAIAALAFVACAAL
Ga0184624_104335771	3300018073	Groundwater Sediment	MLANVFSNTTPPRVENAEGVPLLGLALSVMLMAAIATLAFV
Ga0066655_109019942	3300018431	Grasslands Soil	MLANVFSNTTPPRVEKAEGVPLLGLALSLCVMAAISALAFVACAAL
Ga0066667_111873631	3300018433	Grasslands Soil	MLANVFSNTTPARAEKAKGAPLLDLVLSLCFMAAIAALAFLACAAL
Ga0066662_110635441	3300018468	Grasslands Soil	MLANVFSNNTTPTRVEKAEGLPLLGLVLSLALMAAIAALAFVACAGL
Ga0066662_119449131	3300018468	Grasslands Soil	VFSNTTPPHAAGVSLFGLALSLSFMAVIAALAFVACAAL
Ga0210406_106200331	3300021168	Soil	MLVNVFSNDTTPPRVNTAEGVPIASIALALSFMAAIVALA
Ga0222622_111475931	3300022756	Groundwater Sediment	MLANVFSNTTPPRVENAEGVPLLGLALSVMLMAAIATLAFVACAAL
Ga0207684_101196693	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLANVFSNTTPPRVEEAEGVPLLGFALSLCLMAAIAALAFVACAAL
Ga0207662_112103411	3300025918	Switchgrass Rhizosphere	MLAVFSNTTPPRVEKAEGVPLLGLALSLCVMAAIAALAFV
Ga0209350_10108593	3300026277	Grasslands Soil	MLANVFSNNTTPARVEKAEGVPLLGLALSLSLMATIAALAFVACAAL
Ga0209239_10041148	3300026310	Grasslands Soil	MLASLFSNTTPPRVEKAEGVPLVGLALSLCLMAAIAALAFVACAAI
Ga0209239_10043273	3300026310	Grasslands Soil	MLANVFSNTTTTPRVEEAEGVPLLGLAFSLCLMAAIAALAFVACAAL
Ga0209801_12306461	3300026326	Soil	MLANVFSNTTPPRVEKAEGVPLLGLALSLCVMAAIS
Ga0209056_101665473	3300026538	Soil	MLANVFSNTTPPRVEKAEGVPLLGLALSLCVMAAISALAFVA
Ga0209648_101567833	3300026551	Grasslands Soil	MLANVFSNTTTPRVAKAEGLPLLGLALSLCLMAAIAALAFVACAAL
Ga0209799_10423983	3300027654	Tropical Forest Soil	LGNHLIGEGRMLVNVFSNTTPPRVKTAEGVSIVGVALTLSFMAAIVALAFVACAGL
Ga0307278_100478393	3300028878	Soil	MLANVFSNTTTPRVEKAEGVPLLGLALSLCLMAAIAALAFVACAAL
Ga0306917_100960384	3300031719	Soil	MDPRVRELRMLANVFSNTTTTRVEKAEGVPLLAAIAALAFVACAAL
Ga0306918_109602251	3300031744	Soil	TSALGNHLIGEGCMLVNVFSNTTPPRVKTAEGVSIVGVALTLSFMAAIVALAFVACAGL
Ga0318546_105481433	3300031771	Soil	MLVNVFSNTTPPRVKPRVVSIVGLALSLSFMAAIVALARD
Ga0310917_102625841	3300031833	Soil	MLANVFSNTTTPPRVEEAEGVPLLGLALSLCLMAAIAALAFVACAAL
Ga0310909_108390321	3300031947	Soil	MLVNVFSNTTPPRVKAEGVSIVGLALSLFFMAAIVALAFVACAGL
Ga0306922_114852633	3300032001	Soil	MLVNVFSNTTPPRVKTAEGVSIVGVALTLSFMAAIVALAFVACAG
Ga0306924_124756881	3300032076	Soil	GTSALGNHLIGEGRMLVNVFSNTTPPRVKTAEGVSIVGVALTLSFMAAIVALAFVACAGL
Ga0307471_1029228491	3300032180	Hardwood Forest Soil	MLANVFSNTTTTPRVEEAEGVPLLGLALSLCLMAAIAALAFVACAAL
Ga0306920_1020099891	3300032261	Soil	MLVNVFSNTTPPRVKTAEGVSIVGVALTLSFMAAIVALAFVACAGL
Ga0310914_104866561	3300033289	Soil	MLANVFSNTTTTRVEKAEGVPLLAAIAALAFVACAAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F033635

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences