Metagenome / Metatranscriptome Family F033318

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F033318
Family Type	Metagenome / Metatranscriptome
Number of Sequences	177
Average Sequence Length	44 residues
Representative Sequence	MSRLDSKQRWGLAIGGILLTLLLAAVFTFGSLNVPFEPKSWRAV
Number of Associated Samples	136
Number of Associated Scaffolds	177

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	51.41 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	84.18 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.181 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (28.814 % of family members)
Environment Ontology (ENVO)	Unclassified (31.073 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.847 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.50% β-sheet: 0.00% Coil/Unstructured: 62.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 177 Family Scaffolds
PF05157	T2SSE_N	48.59
PF00730	HhH-GPD	9.60
PF00633	HHH	3.39
PF10576	EndIII_4Fe-2S	2.82
PF00482	T2SSF	1.69
PF00437	T2SSE	1.69
PF08448	PAS_4	0.56

COG ID	Name	Functional Category	% Frequency in 177 Family Scaffolds
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	9.60
COG0177	Endonuclease III	Replication, recombination and repair [L]	9.60
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	9.60
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	9.60
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	9.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.18 %
Unclassified	root	N/A	15.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.18 %
Unclassified	root	N/A	15.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.18 %
Unclassified	root	N/A	15.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	48.02 %
Unclassified	root	N/A	15.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.82 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.56 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	26.55 %
Unclassified	root	N/A	15.82 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.13 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.13 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.69 %
bacterium ADurb.Bin374	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin374	0.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.99 %
Unclassified	root	N/A	15.82 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.13 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.13 %
Vibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales	1.69 %
Acidobacteria bacterium 13_1_40CM_2_60_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_60_7	0.56 %
bacterium ADurb.Bin374	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin374	0.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.99 %
Unclassified	root	N/A	15.82 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.13 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	1.13 %
Vibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae	1.69 %
Acidobacteria bacterium 13_1_40CM_2_60_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_60_7	0.56 %
bacterium ADurb.Bin374	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin374	0.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.99 %
Unclassified	root	N/A	15.82 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.13 %
Desulfuromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae	1.13 %
Vibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio	1.69 %
Acidobacteria bacterium 13_1_40CM_2_60_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_60_7	0.56 %
bacterium ADurb.Bin374	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin374	0.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.99 %
Unclassified	root	N/A	15.82 %
Desulfuromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae → Desulfuromonas	1.13 %
Vibrio cholerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio cholerae	1.69 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.56 %
Acidobacteria bacterium 13_1_40CM_2_60_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_60_7	0.56 %
bacterium ADurb.Bin374	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin374	0.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.99 %
Unclassified	root	N/A	15.82 %
unclassified Desulfuromonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae → Desulfuromonas → unclassified Desulfuromonas	1.13 %
Vibrio cholerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio cholerae	1.69 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.56 %
Acidobacteria bacterium 13_1_40CM_2_60_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_60_7	0.56 %
bacterium ADurb.Bin374	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin374	0.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	25.99 %
Unclassified	root	N/A	15.82 %
Desulfuromonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae → Desulfuromonas → unclassified Desulfuromonas → Desulfuromonas sp.	1.13 %
Vibrio cholerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio cholerae	1.69 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.56 %
Acidobacteria bacterium 13_1_40CM_2_60_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_60_7	0.56 %
bacterium ADurb.Bin374	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin374	0.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001545\|JGI12630J15595_10021913	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300002245\|JGIcombinedJ26739_101055741	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300002245\|JGIcombinedJ26739_101145753	Not Available	666	Open in IMG/M
3300002914\|JGI25617J43924_10364926	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300003368\|JGI26340J50214_10177731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300004080\|Ga0062385_11066725	Not Available	546	Open in IMG/M
3300004080\|Ga0062385_11188940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300004082\|Ga0062384_100022374	All Organisms → cellular organisms → Bacteria → Acidobacteria	2710	Open in IMG/M
3300004082\|Ga0062384_101127836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300004091\|Ga0062387_100381743	All Organisms → cellular organisms → Bacteria → Acidobacteria	942	Open in IMG/M
3300004479\|Ga0062595_101397709	Not Available	638	Open in IMG/M
3300005167\|Ga0066672_10424233	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300005179\|Ga0066684_10032427	All Organisms → cellular organisms → Bacteria → Acidobacteria	2860	Open in IMG/M
3300005439\|Ga0070711_101747754	Not Available	545	Open in IMG/M
3300005467\|Ga0070706_100599239	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300005526\|Ga0073909_10241692	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300005541\|Ga0070733_10337156	Not Available	999	Open in IMG/M
3300005552\|Ga0066701_10050608	All Organisms → cellular organisms → Bacteria	2278	Open in IMG/M
3300005556\|Ga0066707_10330259	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300005559\|Ga0066700_10889738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300005561\|Ga0066699_10036998	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2888	Open in IMG/M
3300005561\|Ga0066699_10656366	All Organisms → cellular organisms → Bacteria → Acidobacteria	751	Open in IMG/M
3300005575\|Ga0066702_10390236	All Organisms → cellular organisms → Bacteria → Acidobacteria	848	Open in IMG/M
3300005586\|Ga0066691_10544046	All Organisms → cellular organisms → Bacteria → Acidobacteria	692	Open in IMG/M
3300005712\|Ga0070764_10317134	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300005944\|Ga0066788_10070083	Not Available	844	Open in IMG/M
3300006059\|Ga0075017_100272205	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300007265\|Ga0099794_10216405	All Organisms → cellular organisms → Bacteria → Acidobacteria	983	Open in IMG/M
3300007788\|Ga0099795_10648833	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300009012\|Ga0066710_102298533	All Organisms → cellular organisms → Bacteria → Acidobacteria	784	Open in IMG/M
3300009038\|Ga0099829_11303613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300009088\|Ga0099830_11432143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300009088\|Ga0099830_11821546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300009089\|Ga0099828_10097413	All Organisms → cellular organisms → Bacteria	2538	Open in IMG/M
3300009098\|Ga0105245_12576672	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae → Desulfuromonas → unclassified Desulfuromonas → Desulfuromonas sp.	562	Open in IMG/M
3300009137\|Ga0066709_103583560	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Desulfuromonadaceae → Desulfuromonas → unclassified Desulfuromonas → Desulfuromonas sp.	563	Open in IMG/M
3300009624\|Ga0116105_1051060	All Organisms → cellular organisms → Bacteria → Acidobacteria	950	Open in IMG/M
3300010048\|Ga0126373_10097097	All Organisms → cellular organisms → Bacteria → Acidobacteria	2717	Open in IMG/M
3300010048\|Ga0126373_10420186	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300010303\|Ga0134082_10052597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1565	Open in IMG/M
3300010321\|Ga0134067_10002057	All Organisms → cellular organisms → Bacteria → Acidobacteria	4849	Open in IMG/M
3300010321\|Ga0134067_10012675	All Organisms → cellular organisms → Bacteria → Acidobacteria	2431	Open in IMG/M
3300010323\|Ga0134086_10285608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300010336\|Ga0134071_10565094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300010337\|Ga0134062_10446314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300010358\|Ga0126370_10253993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1365	Open in IMG/M
3300010359\|Ga0126376_12008306	Not Available	620	Open in IMG/M
3300010376\|Ga0126381_104104332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300010398\|Ga0126383_10585513	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300010398\|Ga0126383_10599303	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300011120\|Ga0150983_13314829	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300011269\|Ga0137392_10199937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio cholerae	1634	Open in IMG/M
3300011269\|Ga0137392_11266965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300011270\|Ga0137391_10254057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1523	Open in IMG/M
3300011270\|Ga0137391_11235981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300011270\|Ga0137391_11284964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300012096\|Ga0137389_10314829	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300012189\|Ga0137388_10739002	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	913	Open in IMG/M
3300012199\|Ga0137383_10598942	All Organisms → cellular organisms → Bacteria → Acidobacteria	806	Open in IMG/M
3300012203\|Ga0137399_10724081	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300012203\|Ga0137399_11385102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300012205\|Ga0137362_10017993	All Organisms → cellular organisms → Bacteria → Acidobacteria	5377	Open in IMG/M
3300012205\|Ga0137362_11398870	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300012205\|Ga0137362_11685503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300012210\|Ga0137378_10761067	All Organisms → cellular organisms → Bacteria → Acidobacteria	880	Open in IMG/M
3300012211\|Ga0137377_10317081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio cholerae	1494	Open in IMG/M
3300012349\|Ga0137387_10982862	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300012349\|Ga0137387_11117845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300012361\|Ga0137360_10823195	All Organisms → cellular organisms → Bacteria → Acidobacteria	799	Open in IMG/M
3300012362\|Ga0137361_10168219	Not Available	1970	Open in IMG/M
3300012363\|Ga0137390_10154661	Not Available	2279	Open in IMG/M
3300012582\|Ga0137358_10029598	All Organisms → cellular organisms → Bacteria → Acidobacteria	3584	Open in IMG/M
3300012685\|Ga0137397_11240767	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300012918\|Ga0137396_10807015	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300012918\|Ga0137396_11065074	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300012923\|Ga0137359_10286330	All Organisms → cellular organisms → Bacteria	1469	Open in IMG/M
3300012925\|Ga0137419_10459893	All Organisms → cellular organisms → Bacteria → Acidobacteria	1004	Open in IMG/M
3300012925\|Ga0137419_11271038	Not Available	618	Open in IMG/M
3300012927\|Ga0137416_10409066	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300012944\|Ga0137410_10325650	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300012971\|Ga0126369_13461427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300012977\|Ga0134087_10012242	All Organisms → cellular organisms → Bacteria → Acidobacteria	2988	Open in IMG/M
3300015052\|Ga0137411_1165103	Not Available	2026	Open in IMG/M
3300015053\|Ga0137405_1048062	Not Available	795	Open in IMG/M
3300015053\|Ga0137405_1061080	All Organisms → cellular organisms → Bacteria → Acidobacteria	4807	Open in IMG/M
3300017930\|Ga0187825_10315491	Not Available	585	Open in IMG/M
3300017959\|Ga0187779_10063629	All Organisms → cellular organisms → Bacteria	2169	Open in IMG/M
3300017959\|Ga0187779_10764860	All Organisms → cellular organisms → Bacteria → Acidobacteria	657	Open in IMG/M
3300017959\|Ga0187779_11046717	Not Available	568	Open in IMG/M
3300018088\|Ga0187771_11286609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300018431\|Ga0066655_10009560	All Organisms → cellular organisms → Bacteria → Acidobacteria	4143	Open in IMG/M
3300018431\|Ga0066655_10102405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1607	Open in IMG/M
3300018433\|Ga0066667_11204494	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300018468\|Ga0066662_11416895	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300018468\|Ga0066662_12647691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300019887\|Ga0193729_1004296	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6915	Open in IMG/M
3300019890\|Ga0193728_1043388	All Organisms → cellular organisms → Bacteria	2206	Open in IMG/M
3300020170\|Ga0179594_10191627	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300020199\|Ga0179592_10028009	All Organisms → cellular organisms → Bacteria → Acidobacteria	2534	Open in IMG/M
3300020199\|Ga0179592_10048072	All Organisms → cellular organisms → Bacteria	1937	Open in IMG/M
3300020579\|Ga0210407_10675084	All Organisms → cellular organisms → Bacteria → Acidobacteria	802	Open in IMG/M
3300020579\|Ga0210407_10727659	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300020579\|Ga0210407_11089042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300020580\|Ga0210403_11201484	Not Available	584	Open in IMG/M
3300020581\|Ga0210399_10142934	All Organisms → cellular organisms → Bacteria	1976	Open in IMG/M
3300020581\|Ga0210399_11239505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300020583\|Ga0210401_10146293	All Organisms → cellular organisms → Bacteria	2210	Open in IMG/M
3300021168\|Ga0210406_11007254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300021171\|Ga0210405_10028262	All Organisms → cellular organisms → Bacteria → Acidobacteria	4505	Open in IMG/M
3300021180\|Ga0210396_10135815	All Organisms → cellular organisms → Bacteria → Acidobacteria	2215	Open in IMG/M
3300021181\|Ga0210388_10380966	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300021384\|Ga0213876_10046840	All Organisms → cellular organisms → Bacteria	2286	Open in IMG/M
3300021384\|Ga0213876_10693013	Not Available	542	Open in IMG/M
3300021401\|Ga0210393_10806941	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300021402\|Ga0210385_11483386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300021403\|Ga0210397_11148561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300021404\|Ga0210389_11127580	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300021405\|Ga0210387_10583987	Not Available	993	Open in IMG/M
3300021406\|Ga0210386_11550469	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300021479\|Ga0210410_10706087	All Organisms → cellular organisms → Bacteria → Acidobacteria	890	Open in IMG/M
3300021479\|Ga0210410_11611890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300021559\|Ga0210409_11396625	Not Available	576	Open in IMG/M
3300021559\|Ga0210409_11595323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300023056\|Ga0233357_1029802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300024330\|Ga0137417_1042340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300025910\|Ga0207684_10524403	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300025914\|Ga0207671_10613628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	867	Open in IMG/M
3300025921\|Ga0207652_11467066	Not Available	586	Open in IMG/M
3300025928\|Ga0207700_11930396	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300026334\|Ga0209377_1100165	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300026508\|Ga0257161_1105745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_60_7	587	Open in IMG/M
3300026527\|Ga0209059_1184156	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300026527\|Ga0209059_1184479	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300026532\|Ga0209160_1125608	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300026551\|Ga0209648_10379651	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300026557\|Ga0179587_10011156	All Organisms → cellular organisms → Bacteria → Acidobacteria	4652	Open in IMG/M
3300026557\|Ga0179587_10452312	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300027610\|Ga0209528_1055005	Not Available	882	Open in IMG/M
3300027635\|Ga0209625_1094814	Not Available	669	Open in IMG/M
3300027635\|Ga0209625_1109875	Not Available	619	Open in IMG/M
3300027651\|Ga0209217_1016027	All Organisms → cellular organisms → Bacteria	2429	Open in IMG/M
3300027671\|Ga0209588_1279988	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300027698\|Ga0209446_1149134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300027775\|Ga0209177_10220150	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300027862\|Ga0209701_10213840	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300027862\|Ga0209701_10214701	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300027867\|Ga0209167_10086444	All Organisms → cellular organisms → Bacteria → Acidobacteria	1587	Open in IMG/M
3300027882\|Ga0209590_10639818	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300027884\|Ga0209275_10302562	Not Available	888	Open in IMG/M
3300027894\|Ga0209068_10909086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300027898\|Ga0209067_10147905	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300027903\|Ga0209488_10015482	All Organisms → cellular organisms → Bacteria → Acidobacteria	5552	Open in IMG/M
3300027903\|Ga0209488_10529798	All Organisms → cellular organisms → Bacteria → Acidobacteria	861	Open in IMG/M
3300028047\|Ga0209526_10381835	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300028536\|Ga0137415_11201255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300030058\|Ga0302179_10170761	All Organisms → cellular organisms → Bacteria → Acidobacteria	961	Open in IMG/M
3300030878\|Ga0265770_1130763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300031018\|Ga0265773_1036790	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300031715\|Ga0307476_10925089	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300031718\|Ga0307474_10827975	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300031720\|Ga0307469_10283412	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300031753\|Ga0307477_10413692	All Organisms → cellular organisms → Bacteria → Acidobacteria	922	Open in IMG/M
3300031753\|Ga0307477_10897944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300031754\|Ga0307475_10139660	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin374	1918	Open in IMG/M
3300031754\|Ga0307475_10799537	Not Available	748	Open in IMG/M
3300031754\|Ga0307475_10905606	Not Available	696	Open in IMG/M
3300031779\|Ga0318566_10590989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300031962\|Ga0307479_10190612	Not Available	2018	Open in IMG/M
3300031962\|Ga0307479_10447829	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300031962\|Ga0307479_10626176	Not Available	1057	Open in IMG/M
3300031962\|Ga0307479_10865333	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300032001\|Ga0306922_10800410	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300032059\|Ga0318533_10737557	All Organisms → cellular organisms → Bacteria → Acidobacteria	723	Open in IMG/M
3300032059\|Ga0318533_10764544	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300032205\|Ga0307472_100022390	Not Available	3492	Open in IMG/M
3300032261\|Ga0306920_103802959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300032895\|Ga0335074_10383499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio cholerae	1537	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.74%
Host-Associated	Host-Associated	2.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.96%
Aquatic	Environmental → Aquatic	6.78%
Plants	Host-Associated → Plants	2.26%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.40%
Freshwater	Environmental → Aquatic → Freshwater	5.08%
Sediment	Environmental → Aquatic → Sediment	1.69%
Roots	Host-Associated → Plants → Roots	1.13%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.13%
Peat	Environmental → Terrestrial → Peat	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.97%
Loam	Environmental → Terrestrial → Soil → Loam	9.04%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.08%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.69%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.13%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.16%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.21%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.13%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.13%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.56%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.56%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	28.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.34%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.34%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.52%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.26%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.26%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.69%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.13%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.13%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.13%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.56%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.56%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300023056	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031018	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12630J15595_100219133	3300001545	Forest Soil	MSRLTSKQRWGFAAAALFLILLLAAVFTFGSLGVPFEPKNWRDVLTLYAVSSF
JGIcombinedJ26739_1010557412	3300002245	Forest Soil	MSHLDNRQRWGLAVGGILLTLLLAAVFTFGSLNIPFEPKNWRAVVLLYA
JGIcombinedJ26739_1011457531	3300002245	Forest Soil	MSHLDSKQRWSLVIGGSLLTLLLAAVFTFGSLDVPF
JGI25617J43924_103649261	3300002914	Grasslands Soil	MSRSDNKQRWGLAIGGILLTLLLAAVFTFGSLNVPFEPKSWRAVMVLYAVS
JGI26340J50214_101777311	3300003368	Bog Forest Soil	MSRLDSKQRWSLVVGGLLVTLLLAAVFTFGSLEVPFQPKSW
Ga0062385_110667252	3300004080	Bog Forest Soil	MSSLASRQRLRLAVAGILLSLLLAAVFTFGSLGVPFEPKN
Ga0062385_111889401	3300004080	Bog Forest Soil	MSSLESRQRFRLAIVGILLTLLLAAVFTFGSLDVPFEPKNWRDAVT
Ga0062384_1000223741	3300004082	Bog Forest Soil	MSRLDSKQRWRLVIGGVFLTLLLAAVFTFGSLDVPFEPKNWRDALTLYAVS
Ga0062384_1011278361	3300004082	Bog Forest Soil	MSRLDSKQHWSLVIGGSLLTLLLAAVFTFGSLEVPFEPKSWRTLMPLYAVSS
Ga0062387_1003817431	3300004091	Bog Forest Soil	MSSLESRQRFRLVIAGIVLTLLLAAVFTFGSLDVPFEPKNWRDALTLYA
Ga0062595_1013977091	3300004479	Soil	MSLAPKHRWGLGFGGVLLALLLAAVFTFGSLDVPFEPGNWRA
Ga0066672_104242331	3300005167	Soil	MRPLDNKQRWGLAFGGILLTLLLAAVFTFGSLNVPFEPKSWRDVMVLYA
Ga0066684_100324271	3300005179	Soil	MSRLESKQRWVLGIGGILLTLLLAAVFTFGSLDVPFHPKSWREVMALYAVSSFI
Ga0070711_1017477541	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSLAPKHRWGLAFGGVLLALLLAAVFTFGSLDVPFEPENWRPLLSLYSVSAFI
Ga0070706_1005992391	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSHLDNRQRWGLVIGGILLTLLLAAVFTFGSLTAPFEPKNWR
Ga0073909_102416921	3300005526	Surface Soil	MSHLDNRQRWGLAVGGILLTLLLAAVFTFGSLTIPFEP
Ga0070733_103371562	3300005541	Surface Soil	MSSLQPKHRWSLAIGGILLSLLLAAVFTFGSLDVPF
Ga0066701_100506083	3300005552	Soil	MSRLDNKQRWGLAIGGILLTLLMAAVFTFGSLNVPFEPKSWRDVMVLYAVSSF
Ga0066707_103302591	3300005556	Soil	MSRLDSKQRWGLAIGGILLTLLLAAVFTFGSLNVPFE
Ga0066700_108897381	3300005559	Soil	MRPLDNKQRWGLAFGGILLTLLLAAVFTFGSLNVPF
Ga0066699_100369983	3300005561	Soil	MSHLDSKQRWGLATGAILLTLLLAAVFTFGSLDVPFHPKSWREVMVLYAVSSF
Ga0066699_106563663	3300005561	Soil	MSRLDSKQRWGLAIGAILLTLLLAAVFTFGSLDVPFHPKSWREVMVLYAVSSF
Ga0066702_103902363	3300005575	Soil	MSRLDSKQRWGLAIGAILLTLLLAAVFTFGSLDVPFHPKS
Ga0066691_105440461	3300005586	Soil	MSRLDTKQRWALIVGGILLTLLLAAVFTFGSLDVPFKPKNWRDVMALYAVSSFI
Ga0070764_103171341	3300005712	Soil	MSRLDSKQRWSLVIGGSLLTLLLAAVFTFGSLEVPFEPKSWRTLMPLYAVS
Ga0066788_100700832	3300005944	Soil	MSPLQPKHRWSLVIGGILLSLLLAAVFTFGSLDLPFEPGTWRANISLF
Ga0075017_1002722051	3300006059	Watersheds	MSRTDNKQRWGLAIGGILLTLLLAAVFTFGSLNVPFEPKSWRAVL
Ga0099794_102164051	3300007265	Vadose Zone Soil	MSHLDNKQRWGLAIGGILLTLLLAAVFTFGSLNVPFEPKSWRAVM
Ga0099795_106488331	3300007788	Vadose Zone Soil	MSSLEPKQRWTLGIGAALLALLLAAVFTFGSLDVPFEPKNWRETIALLSV
Ga0066710_1022985331	3300009012	Grasslands Soil	MSRLESKQRWVLGIGGILLTLLLAAVFTFGSLDVPFHPKSWREVMALY
Ga0099829_113036132	3300009038	Vadose Zone Soil	MSRLDKKQSWGLAIGGILLTLLLAAVFTFGSLDVPFEPKSWRAVMVLYAV
Ga0099830_114321432	3300009088	Vadose Zone Soil	MSRLENKQRWGLAIGGILLTLLLAAVFTFGSLDVPFEPKSWRAVMVLY
Ga0099830_118215461	3300009088	Vadose Zone Soil	MSRLETKQRWGLAIGGILLTVLLAGVFTFGSLDVPF
Ga0099828_100974131	3300009089	Vadose Zone Soil	MSSLEPKQRWTLAIGAALLALLLAAVFTFGSLAVPFEPGNWREAMAL
Ga0105245_125766722	3300009098	Miscanthus Rhizosphere	MSLAPKHRWGLAFGGVLLALLLAAVFTFGSLDVPFE
Ga0066709_1035835601	3300009137	Grasslands Soil	MSLAPKHRWGLAFGGILLALLLAAVFTFGSLDVPFE
Ga0116105_10510601	3300009624	Peatland	MSSLASSQRLRLAVAGILLTLLLAAAFTFGSLGVPF
Ga0126373_100970973	3300010048	Tropical Forest Soil	MTRLESKQRWVLSVGGILLTLLLAAVFTLGSLDVPFKPKSWGDVMALYAVSSLVT
Ga0126373_104201862	3300010048	Tropical Forest Soil	MSRLETRQRLGLTIGGILLTLLLAAVFTFGSLDVPFEPKSWRAVMAL
Ga0134082_100525972	3300010303	Grasslands Soil	MSRLDNKQRWGLAIGGILLTLLLAAVFTFGSLNVPFEPKS
Ga0134067_100020571	3300010321	Grasslands Soil	MSRLESKQRWVLGIGGILLTLLLAAVFTFGSLDIPFHPKSWREVMA
Ga0134067_100126751	3300010321	Grasslands Soil	MSRLDNKQRWGLAIGGILLTVLLAAVFTFGSLNVPFEPKSWRD
Ga0134086_102856081	3300010323	Grasslands Soil	MSRLDSKQRWGLAIGGILLTLLLAAVFTFGSLNVPFEPKSWRAVMVLYAVSS
Ga0134071_105650942	3300010336	Grasslands Soil	MSHLDNKQRWGLAIGGILLTLLLAAVFTFGSLNVPFEP
Ga0134062_104463142	3300010337	Grasslands Soil	MSHLDSKQRWGLGIGGILLTLLLAAVFTLGSLDVPFKPKSWRDVMVLYAVSSFV
Ga0126370_102539932	3300010358	Tropical Forest Soil	MSRLESKQRWVLSVGGILLTLLLAAVFTLGSLDVPFKPKSWGDVMAL
Ga0126376_120083062	3300010359	Tropical Forest Soil	MSSLQPRQRWTLVIGGILLSLLLGAVFTFGSLDVPFEPGNWRALLP
Ga0126381_1041043321	3300010376	Tropical Forest Soil	MSRLESKQRWGLGIGGILLTLLLAAVFTFGSLDVPFHPKSWREVMVLYAVSS
Ga0126383_105855131	3300010398	Tropical Forest Soil	MSREGSKHRLPLILGGIGLSLLLAAVFTFGSLNVPFEPQDWRDVLT
Ga0126383_105993031	3300010398	Tropical Forest Soil	MSRVDSKQRWVLVIGGILLTLLLAAVFTFGSLDVPFHPKSWREVMALYAV
Ga0150983_133148292	3300011120	Forest Soil	MSSLEPKQRWTLGIGAALLTLLLAAVFTFGSLDMPFEPRNWR
Ga0137392_101999372	3300011269	Vadose Zone Soil	MSQIDSKQRWGLTVGGILLTLLLAAVFTFGSLDVPFE
Ga0137392_112669652	3300011269	Vadose Zone Soil	MSRLDNKQRWGLTIGGILLTLLLAAVFTFGSLNVPF
Ga0137391_102540571	3300011270	Vadose Zone Soil	MSPLESKQRWSLAIGGVLLTLLLAAVFTFGSLDVPFEPKDWREVMAL
Ga0137391_112359811	3300011270	Vadose Zone Soil	MSRLDKKQSWGLAIGGILLTLLLAAVFTFGSLTVPLEPKSWRAVMVLY
Ga0137391_112849641	3300011270	Vadose Zone Soil	MSRLDNKQSWGLAIGGILLTLLLAAVFTFGSLNVPFEP
Ga0137389_103148291	3300012096	Vadose Zone Soil	MSRLDNKQRWGLAIGGILLALLLAAVFTFGSLDVPFEPK
Ga0137388_107390022	3300012189	Vadose Zone Soil	AACLMSSLEPKQRWTLAIVAALLALLLSAVFTFGSLAVPFEP*
Ga0137383_105989422	3300012199	Vadose Zone Soil	MSRLESKQRWGLGIGGILLTLLLAVVFTFGSLDVPFHP
Ga0137399_107240812	3300012203	Vadose Zone Soil	MSRLDKKQRWGLAIGGILLTLLLAAVFTFGSLNVPFEPKSWRDVMVL
Ga0137399_113851021	3300012203	Vadose Zone Soil	MDNKQQWGLAIGGILLTLLLAAVFTFGSLDVPFEPKSWRAVM
Ga0137362_100179935	3300012205	Vadose Zone Soil	MSRLDTKQRWALAVGGILLTLLLAAVFTFGSLDVPFKP
Ga0137362_113988701	3300012205	Vadose Zone Soil	MSHLNNKQRWGLAIGGILLTLLLAALFTFGSLNVPFEPKSWRAVMVLYAVSSF
Ga0137362_116855031	3300012205	Vadose Zone Soil	MSHLHNKQRWGLAIGGILLTLLLAAVFTFGSLNVPFEPKSWRAVMVL
Ga0137378_107610672	3300012210	Vadose Zone Soil	MSRLDSKQRWGLAIGGILLTLLLAAVFTFGSLNVPFEPKSWRAVMVLY
Ga0137377_103170812	3300012211	Vadose Zone Soil	MSRLESKQRWGLGIGGILLTLLLAVVFTFGSLDVPFHPKSWREVM
Ga0137387_109828622	3300012349	Vadose Zone Soil	MSRLDNKQRWGLAIGGILLTLLLAAVFTFGSLNVPFEP
Ga0137387_111178451	3300012349	Vadose Zone Soil	MSRLDSKQRWGLAIGGILLTLLLAAVFTFGSLNVPFEPKSWRAVM
Ga0137360_108231951	3300012361	Vadose Zone Soil	MSHLHNKQRWGLAIGGILLTLLLAAVFTFGSLNVPFEPKSWRAVMVLYA
Ga0137361_101682191	3300012362	Vadose Zone Soil	MSHLDNKQRWGLAIGGILLTLLLAAVFTFGSLNVPFEPKSWR
Ga0137390_101546611	3300012363	Vadose Zone Soil	MSRLDNKQRWGLAIGGILLTLLLAAVFTFGSLNVPFEPKSWRAVMVLYAVSS
Ga0137358_100295985	3300012582	Vadose Zone Soil	MSRLDNKQRWGLAIGGILLTLLLAAVFTFGSLNVPFEPKSWRAVMVLYAVSSF
Ga0137397_112407671	3300012685	Vadose Zone Soil	MSSLEPKQRWTLGIGAALLALLLAAVFTFGSLDVPFEPKNWRETIALLSVSSFVT
Ga0137396_108070152	3300012918	Vadose Zone Soil	MSRLDNRQRWGLAIGGILLTLLLAAVFTFGSLNVPFEPK
Ga0137396_110650741	3300012918	Vadose Zone Soil	MSHLNNRQRWGLAIGGILLTLLMAAVFTFGSLTVPFEPKDWRAGMM
Ga0137359_102863301	3300012923	Vadose Zone Soil	MSSLEPKQRWTLGVGAALLTLLLSAVFTFGSLDVPFEPKS
Ga0137419_104598931	3300012925	Vadose Zone Soil	MSHLHNKQRWGLAIGGILLTLLLAAVFTFGSLNVPFEPKSLRAVM
Ga0137419_112710382	3300012925	Vadose Zone Soil	MSSLEPRQRWTLGIGAALLTLLLAAVFTFGSLDVPFE
Ga0137416_104090661	3300012927	Vadose Zone Soil	MSSLEPKQRWTLAIGAALLALLLAAVFTFGSLDVPFEPKNWRET
Ga0137410_103256502	3300012944	Vadose Zone Soil	MSHLNNRQRWGLVIGGILLTLLLAAVFTFGSLNVPFEA
Ga0126369_134614271	3300012971	Tropical Forest Soil	MSRLESKQRWGLGIGGILLTLLLAAVFTFGSLDVP
Ga0134087_100122421	3300012977	Grasslands Soil	MSHLNSKQRWGLGFGGILLTLLLAAVFTFGSLDVPFHPKSWREVLALYTVSSFVTA
Ga0137411_11651032	3300015052	Vadose Zone Soil	MSHLNNRQRWGLVIGGILLTLLLAAVFTFGSLNVP
Ga0137405_10480622	3300015053	Vadose Zone Soil	MSSLQPKHRWSLAIGGILLSLLLAAVFTFGSLDVPFEPGSWRARISLFAVS
Ga0137405_10610801	3300015053	Vadose Zone Soil	MSHLDNRQRWGLVIGGILLTLLLAAVFTFGSLNVPFELKDWRARMPLF
Ga0187825_103154911	3300017930	Freshwater Sediment	MSHLQPKQRWTLVFGGLLFTLLLAAVFTFGSLDVPFAPKS
Ga0187779_100636291	3300017959	Tropical Peatland	MSREGSKHRLPLTLGGIGLSLLLAAVFTFGSLNVPFEPQNWRDVLTLYAV
Ga0187779_107648601	3300017959	Tropical Peatland	MSRLENKQRWVLAIGGILLTLLLAAIFTFGSLDVPFEPKS
Ga0187779_110467172	3300017959	Tropical Peatland	MSSLPPKQRWSLVLGGVLLSLLLGAVFTFGSLDVPFEPGNWRAVLAL
Ga0187771_112866092	3300018088	Tropical Peatland	MSRLENKQRLVLTVGGILLTLLLAAIFTFGSLDVPFEPKSWRAVLVL
Ga0066655_100095601	3300018431	Grasslands Soil	MSRLDNKQRWGLAIGGILLTVLLAAVFTFGSLNVPFEPKS
Ga0066655_101024051	3300018431	Grasslands Soil	MSRLDSKQRWGLAIGGILLTLLLAAVFTFGSLNVPFEPKSWRAV
Ga0066667_112044942	3300018433	Grasslands Soil	MSRLDNKQRWGLAIGGILLTLLLAAVFTFGSLNVP
Ga0066662_114168951	3300018468	Grasslands Soil	MSHLESKQRWVLGIGGILLTLLLAAVFTFGSLDVPFHPKSWRE
Ga0066662_126476911	3300018468	Grasslands Soil	MSRLDNKQRWGLAIGGILLTLLFAAVFTFGSLNVPFEPKSWR
Ga0193729_10042961	3300019887	Soil	MSRLTSKQRWGFAAGALFLILLLAAVFTFGSLGVPFEPKNWR
Ga0193728_10433882	3300019890	Soil	MSRLNSKQRWGISLGALFLTLLLAAVFTFGSLGVPFEPKNW
Ga0179594_101916272	3300020170	Vadose Zone Soil	MSRLNIKQHWGLAVGGILLTLLLAAVFTFGSLNVPFEPKSWRAVMALYAVSSFI
Ga0179592_100280091	3300020199	Vadose Zone Soil	MSRLNIKQRWGLAVGGILLTLLLAAVFTFGSLNVPFEPKSWRAVMALYAVS
Ga0179592_100480721	3300020199	Vadose Zone Soil	MSSLEPKQRWTLGIGAALLALLLAAVFTFGSLDVPFEPKNWRETIALLSVSSF
Ga0210407_106750841	3300020579	Soil	MSRLEPKQRLQLAIGGVCLTLLFAAVFTFGSLNVPFEPQNW
Ga0210407_107276591	3300020579	Soil	MSRLDSKQRWSLVIGGSLLTLLLAAVFTFGSLDVPF
Ga0210407_110890422	3300020579	Soil	MSRLDSKQRWTLVTGGILLTLLLAAVFTFGSLEVPFEPKSWRAL
Ga0210403_112014842	3300020580	Soil	MSRLDSKQRWTLVTGGILLTLLLAAVFTFGSLEVPFEPKS
Ga0210399_101429341	3300020581	Soil	MSSLQPKHRWSLAVGGILLTLLLAAVFTFGSLDFPF
Ga0210399_112395051	3300020581	Soil	MSRLDSKQRWRLVLGGIFLTLLMAAVFTFGSLDVPFEPKNWR
Ga0210401_101462933	3300020583	Soil	MSSHQPKHRWSLAIGGILLSLLLAAVFTFGSLDVPFEPGSWRAK
Ga0210406_110072541	3300021168	Soil	MSHLDSKQRWSLVIGGSLLTLLLAAVFTFGSLDVPFEPKSWRAL
Ga0210405_100282621	3300021171	Soil	MSSLEPKQRWTLGVGAALLTLLLAAVFTFGSLDVPFEPKNWREAMALYAVSSLI
Ga0210396_101358153	3300021180	Soil	MSRLDSKQRWSLVIGGSLLTLLLAAVFTFGSLEVPFEPKSW
Ga0210388_103809661	3300021181	Soil	MSHLNKRQSWGLAISGILLTLLLAAVFTFGSLNVPFEPKGWRAGMVLFA
Ga0213876_100468401	3300021384	Plant Roots	VSLRPRQRWTLVFGGITIALLLAAIFTFGSLDVPFKPGNWRAVMGLYSVSS
Ga0213876_106930132	3300021384	Plant Roots	VSLRPRQRWTLVFGGITIALLLAAIFTFGSLDVPINPAN
Ga0210393_108069411	3300021401	Soil	MSRLDSKQRWTLVTGGILLTLLLAAVFTFGSLEVPFE
Ga0210385_114833861	3300021402	Soil	MSRLDSKQRWSLVFGGILLTLLLAAVFTFGSLEVPFEPKSWRTLMPLY
Ga0210397_111485612	3300021403	Soil	MSRLTAKQRWGFAAGALFLILLLAAVFTFGSLGVPFEPKNWRELLTLYAVT
Ga0210389_111275802	3300021404	Soil	MSPLESKHRFRLILAGIFLTMLLAAVFTFGSLDVPFEPKNWR
Ga0210387_105839871	3300021405	Soil	MSPLQPKHRWSLAIGGVLLSFLLAAVFTFGSLDVP
Ga0210386_115504692	3300021406	Soil	MSRLDSKQRWSLVIGGSLLTLLLAAVFTFGSLDVP
Ga0210410_107060872	3300021479	Soil	MSRPDNKQRWGLAIGGILLTLLLAAVFTFGSLTVPFEPK
Ga0210410_116118902	3300021479	Soil	MDNKQQWGLAIGGILLTLLLAAVFTFGSLDVPFEPKSWRAVMVL
Ga0210409_113966251	3300021559	Soil	MSSLQPKHRWSLAVGGILLTLLLAAVFTFGSLDFPFEPGTWRAAMALYAVSSFI
Ga0210409_115953231	3300021559	Soil	MSRLDSKQRWGLAIGGILLTLLLAAVFTFGSLNVPFEPKSWRAVMVLYAVSSFI
Ga0233357_10298021	3300023056	Soil	MSRLTSKQRWGFAAGALFLILLLAAVFTFGSLGVPFEPKNWRELLTLY
Ga0137417_10423401	3300024330	Vadose Zone Soil	MSRLDTKQRWMLVGGGFCLTILLAAVFTFGSLDVPFEPKNWRDALTLYA
Ga0207684_105244032	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSHLDNRQRWGLVIGGILLTLLLAAVFTFGSLTAPFEPK
Ga0207671_106136282	3300025914	Corn Rhizosphere	MSLRPRQRWTLVFGGIAITLLLAAIFTFGSLDVPFKPGNWRAVMGLYS
Ga0207652_114670662	3300025921	Corn Rhizosphere	MSRLDSKQRWSLVIGGILLTLLFAAVFTFGSLEVPF
Ga0207700_119303961	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSSLEPKQRWTLGIGAALLALLLAAVFTFGSLDVPFEPKNWRET
Ga0209377_11001652	3300026334	Soil	MSRLDNKQRWGLAIGGILLTVLLAAVFTFGSLNVPF
Ga0257161_11057451	3300026508	Soil	MSSLEPKQRWTLGIGAALLTLLLSAVFTFGSLDVPFEPKNWREAIALYAV
Ga0209059_11841561	3300026527	Soil	MSHLDSKQRWGLATGAILLTLLLAAVFTFGSLDVPFHPKSWREVMV
Ga0209059_11844791	3300026527	Soil	MSRLDSKQRWGLAIGAILLTLLLAAVFTFGSLDVPFHPKSWREVMV
Ga0209160_11256081	3300026532	Soil	MSRLESKQRWGLGIGGILLTLLLAVVFTFGSLDVPFHPKSWREVMVLYAVSSF
Ga0209648_103796512	3300026551	Grasslands Soil	MSRLDSKQRWSLLIGGVLLTLLLAAVFTFGSLDVPFEPSSW
Ga0179587_100111564	3300026557	Vadose Zone Soil	MSHLDNKQRWGLAIGGILLTLLLAAVFTFGSLDVPFEPKSWRAVMAL
Ga0179587_104523121	3300026557	Vadose Zone Soil	MSPLEPKQRWTLATGAALLALLLAAVFTFGSLAVPFEPGNWREAMALYA
Ga0209528_10550052	3300027610	Forest Soil	MSSHQPKHRWTLAIGGILLSLLLAAVFTFGSLDMPFE
Ga0209625_10948142	3300027635	Forest Soil	MSSLEPKQRWTLGIGAALLTLLLAAVFTFGSLDVPFEPKNWRET
Ga0209625_11098751	3300027635	Forest Soil	VSPLAPKQRWTLGIGAALLTLLLAAVFTFGSLDVNFEPSNWRQLLPLYAVS
Ga0209217_10160273	3300027651	Forest Soil	MSPLHPKQRWSLAIGGILLTLLLAAVFTFGSLDVPFEPGNWRAAMALYAV
Ga0209588_12799882	3300027671	Vadose Zone Soil	MSSLEPKQRWTLGIGAALLALLLAAVFTFGSLDVPF
Ga0209446_11491342	3300027698	Bog Forest Soil	MSSPESRQRLRLAIAGIFLTLLLAAVFTFGSLDVPFEPKNWRDALTLYAV
Ga0209177_102201502	3300027775	Agricultural Soil	MSRLESKQRWGLGIGGILLTLLLAAVFTFGSLDVPFHPK
Ga0209701_102138401	3300027862	Vadose Zone Soil	MSHLNNRQRWGLAIGGILLTLLMAAVFTFGSLNVPFEPKS
Ga0209701_102147011	3300027862	Vadose Zone Soil	MSRLDSKQRWGLAIGGILLTLLLAAVFTFGSLNVPFEPRSW
Ga0209167_100864441	3300027867	Surface Soil	MSLRPRQRWTLVIGGIAITLLLAAIFTFGSLDVPFKPGNW
Ga0209590_106398182	3300027882	Vadose Zone Soil	MSRLDSKQRWGLAIGGILLTLLLAAVFTFGSLDVPFEPKS
Ga0209275_103025621	3300027884	Soil	MSSLQPKHRWSLAIGGILLSLLLAAVFTFGSLDVPFEPGGWRAKLVLFA
Ga0209068_109090861	3300027894	Watersheds	MSRTDNKQRWGLAIGGILLTLLLAAVFTFGSLNVPFEPKSWRAVMVLY
Ga0209067_101479052	3300027898	Watersheds	MSRLDNRQRLGLAIGGILLSLLLAAVFTFGSLDTPFDPKSWRAVMVLYAV
Ga0209488_100154826	3300027903	Vadose Zone Soil	MSPLEPKQRWTLATGAALLALLLAAVFTFGSLAVPFEPGNWREAMALY
Ga0209488_105297982	3300027903	Vadose Zone Soil	MSRLDSKQRWGLAIGGILLALLLAAVFTFGSLNVPFEPKS
Ga0209526_103818352	3300028047	Forest Soil	MSHLDNRQRWGLAVGGILLTLLLAAVFTFGSLNIPFEPKNWR
Ga0137415_112012551	3300028536	Vadose Zone Soil	MSRLDTKQRWMLVGGGFCLTILLAAVFTFGSLDVPFEPKNWRDALTLYAVSS
Ga0302179_101707612	3300030058	Palsa	MSNFISRPRFRLAIAGVFLTLLLAAVFTFGSLDVPFEPKNWRDALTLYA
Ga0265770_11307631	3300030878	Soil	MSRLDSKQRWTLVIGGILVTLLLAAVFTFGSLEVPFEPKSWRTLM
Ga0265773_10367902	3300031018	Soil	MSRLDSKQRWTLVIGGILVTLLLAAVFTFGSLEVPFEPKSWRTLMPLYAVSSF
Ga0307476_109250892	3300031715	Hardwood Forest Soil	MSSHQSKHRWSLAIGGILLSLLLAAVFTFGSLDVPFEPGS
Ga0307474_108279752	3300031718	Hardwood Forest Soil	MSRLEPRQTLRLVVAGIFLTLLLAAVFTFGSLGVPFE
Ga0307469_102834121	3300031720	Hardwood Forest Soil	MSRLDSKQRWSLAIGGILLTLLFAAVFTFGSLEVPFEPKS
Ga0307477_104136921	3300031753	Hardwood Forest Soil	MSRLNNKQRWGLAVGGILLTLLLAAVFTFGSLNVPFEPKSWRAVMALYAVSSFI
Ga0307477_108979441	3300031753	Hardwood Forest Soil	MSHLDSKQRWSLVIGGSLLTLLLAAVFTFGSLDVPFEPKSWRALMPLYAVS
Ga0307475_101396602	3300031754	Hardwood Forest Soil	MSRMDNKQQWGLAIGGILLTLLLAAVFTFGSLDVPFEPKSWRAVMVLYAVSS
Ga0307475_107995372	3300031754	Hardwood Forest Soil	MSSLEPKQRWTLGIGAALLALLLAAVFTFGSLDVP
Ga0307475_109056062	3300031754	Hardwood Forest Soil	MSSLEPKQRWTLGIGAALLALLLAAVFTFGSLDVPFEPKNW
Ga0318566_105909892	3300031779	Soil	MSRPGSKHRFPLILGGIGLSLLLAAVFTFGSLNVPFEPQSWREVLT
Ga0307479_101906121	3300031962	Hardwood Forest Soil	MSRLDKKQRWGLAIGGILLTLLLAAVFTFGSLNVPFEPRSW
Ga0307479_104478292	3300031962	Hardwood Forest Soil	MSRMDNKQQWGLAIGGILLTLLLAAVFTFGSLDVPFEPKSWRAVMV
Ga0307479_106261762	3300031962	Hardwood Forest Soil	MSSLEPRQRWTLGIGAALLTLLLAAVFTFGSLDVPFEPGN
Ga0307479_108653332	3300031962	Hardwood Forest Soil	MSRLTSKQRWGFAVGALFLILLLAAVFTFGSLGVPFEPKNWRDVLTLY
Ga0306922_108004102	3300032001	Soil	MSRLESKQRWGLATGGILLTLLLAAVFTFGSLDVPFHPKSWREVM
Ga0318533_107375572	3300032059	Soil	MSRLESKQRWGLATGGILLTLLLAAVFTFGSLDVPFHPKSWREVMVLYAVSSFV
Ga0318533_107645442	3300032059	Soil	MSRPGSKHRFPLILGGIGLSLLLAAVFTFGSLNVPFEPQSW
Ga0307472_1000223904	3300032205	Hardwood Forest Soil	MSHLNKRQRLGLVIGGILLTLLLAAVFTFGSLNVPFEPKD
Ga0306920_1038029592	3300032261	Soil	VSRLDSKQRWVLGIGGVLLTLLLAAVFTFGSLDVPFHPKSWREVMAL
Ga0335074_103834991	3300032895	Soil	MSHLEPKQRWSLAIGGVLLTLLLAAVFTFGSLDVPFEPSSWRAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F033318

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences