NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F032692

Metagenome / Metatranscriptome Family F032692

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F032692
Family Type Metagenome / Metatranscriptome
Number of Sequences 179
Average Sequence Length 75 residues
Representative Sequence MSIVDDLIENLVERNVVQLNGTLTIALVDGGVKVKGTVLSTLSDQKKNKTLLNVSIPVDADVKVGEVVIPLPNIK
Number of Associated Samples 140
Number of Associated Scaffolds 179

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 76.97 %
% of genes near scaffold ends (potentially truncated) 24.58 %
% of genes from short scaffolds (< 2000 bps) 87.71 %
Associated GOLD sequencing projects 128
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (66.480 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(10.056 % of family members)
Environment Ontology (ENVO) Unclassified
(43.017 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(53.073 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 10.68%    β-sheet: 41.75%    Coil/Unstructured: 47.57%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 179 Family Scaffolds
PF05199GMC_oxred_C 7.82
PF09471Peptidase_M64 5.03
PF064393keto-disac_hyd 3.35
PF13413HTH_25 2.23
PF05922Inhibitor_I9 1.68
PF02627CMD 1.12
PF13360PQQ_2 1.12
PF09994DUF2235 1.12
PF01925TauE 0.56
PF00072Response_reg 0.56
PF00719Pyrophosphatase 0.56
PF00196GerE 0.56
PF03795YCII 0.56
PF13493DUF4118 0.56
PF13620CarboxypepD_reg 0.56
PF01435Peptidase_M48 0.56
PF04972BON 0.56
PF00238Ribosomal_L14 0.56
PF13715CarbopepD_reg_2 0.56
PF00239Resolvase 0.56
PF00753Lactamase_B 0.56
PF03972MmgE_PrpD 0.56
PF12704MacB_PCD 0.56
PF07637PSD5 0.56
PF16217M64_N 0.56
PF07586HXXSHH 0.56

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 179 Family Scaffolds
COG2303Choline dehydrogenase or related flavoproteinLipid transport and metabolism [I] 7.82
COG1404Serine protease, subtilisin familyPosttranslational modification, protein turnover, chaperones [O] 1.68
COG0599Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase familyGeneral function prediction only [R] 1.12
COG2128Alkylhydroperoxidase family enzyme, contains CxxC motifInorganic ion transport and metabolism [P] 1.12
COG0093Ribosomal protein L14Translation, ribosomal structure and biogenesis [J] 0.56
COG0221Inorganic pyrophosphataseEnergy production and conversion [C] 0.56
COG0730Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 familyInorganic ion transport and metabolism [P] 0.56
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 0.56
COG20792-methylcitrate dehydratase PrpDCarbohydrate transport and metabolism [G] 0.56
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 0.56
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 0.56


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A66.48 %
All OrganismsrootAll Organisms33.52 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2199352025|deepsgr__Contig_138064Not Available626Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_104782031Not Available995Open in IMG/M
3300000550|F24TB_11365321Not Available706Open in IMG/M
3300000559|F14TC_103020877Not Available1283Open in IMG/M
3300000956|JGI10216J12902_101529306All Organisms → cellular organisms → Bacteria1459Open in IMG/M
3300000956|JGI10216J12902_102526259All Organisms → cellular organisms → Bacteria → Acidobacteria5403Open in IMG/M
3300000956|JGI10216J12902_112588201All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium1117Open in IMG/M
3300000956|JGI10216J12902_113862059Not Available636Open in IMG/M
3300001661|JGI12053J15887_10394591Not Available665Open in IMG/M
3300002122|C687J26623_10090982All Organisms → cellular organisms → Bacteria → Acidobacteria834Open in IMG/M
3300002124|C687J26631_10007660All Organisms → cellular organisms → Bacteria3893Open in IMG/M
3300004114|Ga0062593_102194344Not Available618Open in IMG/M
3300004643|Ga0062591_100132111Not Available1698Open in IMG/M
3300005168|Ga0066809_10134952Not Available630Open in IMG/M
3300005289|Ga0065704_10824505Not Available517Open in IMG/M
3300005294|Ga0065705_10471681Not Available804Open in IMG/M
3300005295|Ga0065707_10145037All Organisms → cellular organisms → Bacteria → Acidobacteria1724Open in IMG/M
3300005295|Ga0065707_10580757Not Available702Open in IMG/M
3300005328|Ga0070676_10118498All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1658Open in IMG/M
3300005330|Ga0070690_101061832Not Available641Open in IMG/M
3300005332|Ga0066388_107374728Not Available552Open in IMG/M
3300005335|Ga0070666_10072146All Organisms → cellular organisms → Bacteria → Proteobacteria2351Open in IMG/M
3300005335|Ga0070666_10800407Not Available694Open in IMG/M
3300005354|Ga0070675_100542649Not Available1051Open in IMG/M
3300005354|Ga0070675_100777938Not Available874Open in IMG/M
3300005356|Ga0070674_100473900Not Available1038Open in IMG/M
3300005438|Ga0070701_10711047Not Available677Open in IMG/M
3300005444|Ga0070694_100089228All Organisms → cellular organisms → Bacteria2160Open in IMG/M
3300005444|Ga0070694_100837214Not Available756Open in IMG/M
3300005445|Ga0070708_101346585Not Available666Open in IMG/M
3300005445|Ga0070708_101848858Not Available560Open in IMG/M
3300005468|Ga0070707_100177317Not Available2077Open in IMG/M
3300005471|Ga0070698_100153477All Organisms → cellular organisms → Bacteria → Proteobacteria2249Open in IMG/M
3300005535|Ga0070684_100968186Not Available798Open in IMG/M
3300005543|Ga0070672_100541223Not Available1010Open in IMG/M
3300005544|Ga0070686_100062487All Organisms → cellular organisms → Bacteria2410Open in IMG/M
3300005544|Ga0070686_100333735All Organisms → cellular organisms → Bacteria1134Open in IMG/M
3300005544|Ga0070686_101842823Not Available515Open in IMG/M
3300005548|Ga0070665_102055930Not Available576Open in IMG/M
3300005549|Ga0070704_101031754Not Available745Open in IMG/M
3300005578|Ga0068854_101538019Not Available605Open in IMG/M
3300005764|Ga0066903_100068454All Organisms → cellular organisms → Bacteria4515Open in IMG/M
3300005764|Ga0066903_101256595All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1380Open in IMG/M
3300005841|Ga0068863_100288119All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1592Open in IMG/M
3300005842|Ga0068858_100380635All Organisms → cellular organisms → Bacteria1354Open in IMG/M
3300005843|Ga0068860_100334462All Organisms → cellular organisms → Bacteria1488Open in IMG/M
3300006049|Ga0075417_10212571All Organisms → cellular organisms → Bacteria919Open in IMG/M
3300006237|Ga0097621_100130823Not Available2136Open in IMG/M
3300006237|Ga0097621_101276882Not Available693Open in IMG/M
3300006358|Ga0068871_102423211Not Available500Open in IMG/M
3300006603|Ga0074064_11795790All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium938Open in IMG/M
3300006846|Ga0075430_100724721Not Available820Open in IMG/M
3300006846|Ga0075430_100745308Not Available807Open in IMG/M
3300006852|Ga0075433_10364934All Organisms → cellular organisms → Bacteria1275Open in IMG/M
3300006854|Ga0075425_100009672All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.10262Open in IMG/M
3300006881|Ga0068865_101917282Not Available537Open in IMG/M
3300006914|Ga0075436_100695362All Organisms → cellular organisms → Bacteria753Open in IMG/M
3300007004|Ga0079218_11557391All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium720Open in IMG/M
3300009087|Ga0105107_10424623All Organisms → cellular organisms → Bacteria926Open in IMG/M
3300009098|Ga0105245_10565531All Organisms → cellular organisms → Bacteria1160Open in IMG/M
3300009101|Ga0105247_11274100Not Available589Open in IMG/M
3300009177|Ga0105248_10930656All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium982Open in IMG/M
3300009551|Ga0105238_10332605All Organisms → cellular organisms → Bacteria → Proteobacteria1506Open in IMG/M
3300009610|Ga0105340_1450599Not Available575Open in IMG/M
3300009840|Ga0126313_10435503Not Available1044Open in IMG/M
3300009873|Ga0131077_10015064All Organisms → cellular organisms → Bacteria14360Open in IMG/M
3300010038|Ga0126315_10503244Not Available773Open in IMG/M
3300010047|Ga0126382_10495399Not Available981Open in IMG/M
3300010320|Ga0134109_10290425Not Available627Open in IMG/M
3300010360|Ga0126372_10438598Not Available1206Open in IMG/M
3300010362|Ga0126377_10018037All Organisms → cellular organisms → Bacteria5741Open in IMG/M
3300010362|Ga0126377_10116489All Organisms → cellular organisms → Bacteria2462Open in IMG/M
3300010362|Ga0126377_10710585All Organisms → cellular organisms → Bacteria → Acidobacteria1058Open in IMG/M
3300010391|Ga0136847_10067418Not Available524Open in IMG/M
3300010399|Ga0134127_12186590Not Available632Open in IMG/M
3300010400|Ga0134122_10171243All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1781Open in IMG/M
3300010400|Ga0134122_10878755All Organisms → cellular organisms → Bacteria865Open in IMG/M
3300010400|Ga0134122_12976597Not Available528Open in IMG/M
3300011119|Ga0105246_11892248Not Available573Open in IMG/M
3300011427|Ga0137448_1220883Not Available525Open in IMG/M
3300011428|Ga0137456_1076973Not Available834Open in IMG/M
3300011442|Ga0137437_1099223Not Available998Open in IMG/M
3300012212|Ga0150985_109682368All Organisms → cellular organisms → Bacteria930Open in IMG/M
3300012212|Ga0150985_114570762Not Available557Open in IMG/M
3300012212|Ga0150985_122362497All Organisms → cellular organisms → Bacteria1920Open in IMG/M
3300012232|Ga0137435_1004963All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3816Open in IMG/M
3300012354|Ga0137366_11189828Not Available519Open in IMG/M
3300012469|Ga0150984_100026248Not Available533Open in IMG/M
3300012469|Ga0150984_102581509Not Available770Open in IMG/M
3300012469|Ga0150984_120891496Not Available581Open in IMG/M
3300012469|Ga0150984_121595955Not Available713Open in IMG/M
3300012683|Ga0137398_10853934Not Available636Open in IMG/M
3300012892|Ga0157294_10278926Not Available526Open in IMG/M
3300012895|Ga0157309_10010624All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium1843Open in IMG/M
3300012922|Ga0137394_10362579Not Available1237Open in IMG/M
3300012971|Ga0126369_13520284Not Available513Open in IMG/M
3300013297|Ga0157378_10547324Not Available1162Open in IMG/M
3300014326|Ga0157380_10124855All Organisms → cellular organisms → Bacteria2186Open in IMG/M
3300014326|Ga0157380_10360346Not Available1364Open in IMG/M
3300015371|Ga0132258_10570699All Organisms → cellular organisms → Bacteria2837Open in IMG/M
3300015372|Ga0132256_100566261All Organisms → cellular organisms → Bacteria1250Open in IMG/M
3300015372|Ga0132256_103122160Not Available557Open in IMG/M
3300015373|Ga0132257_102850961Not Available630Open in IMG/M
3300015374|Ga0132255_101408821All Organisms → cellular organisms → Bacteria1053Open in IMG/M
3300015374|Ga0132255_105981360Not Available515Open in IMG/M
3300017792|Ga0163161_11075767Not Available690Open in IMG/M
3300017944|Ga0187786_10429495Not Available581Open in IMG/M
3300017947|Ga0187785_10391217Not Available666Open in IMG/M
3300017997|Ga0184610_1227375Not Available622Open in IMG/M
3300018028|Ga0184608_10149546Not Available1006Open in IMG/M
3300018052|Ga0184638_1008155All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3493Open in IMG/M
3300018067|Ga0184611_1105374Not Available981Open in IMG/M
3300018067|Ga0184611_1158366Not Available803Open in IMG/M
3300018072|Ga0184635_10315009Not Available609Open in IMG/M
3300018076|Ga0184609_10348271Not Available691Open in IMG/M
3300018429|Ga0190272_11658578Not Available659Open in IMG/M
3300018476|Ga0190274_12158822Not Available654Open in IMG/M
3300018476|Ga0190274_13327812Not Available542Open in IMG/M
3300018481|Ga0190271_11558370All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium777Open in IMG/M
3300018481|Ga0190271_13825300Not Available504Open in IMG/M
3300018920|Ga0190273_11227446Not Available640Open in IMG/M
3300019377|Ga0190264_10894889Not Available692Open in IMG/M
3300019879|Ga0193723_1028714All Organisms → cellular organisms → Bacteria1682Open in IMG/M
3300020002|Ga0193730_1018767All Organisms → cellular organisms → Bacteria → Acidobacteria1990Open in IMG/M
3300020034|Ga0193753_10254208Not Available779Open in IMG/M
3300020064|Ga0180107_1190159Not Available574Open in IMG/M
3300021073|Ga0210378_10126446Not Available991Open in IMG/M
3300021073|Ga0210378_10352590Not Available549Open in IMG/M
3300021082|Ga0210380_10076927All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1461Open in IMG/M
3300021344|Ga0193719_10184392Not Available894Open in IMG/M
3300021363|Ga0193699_10325981Not Available640Open in IMG/M
3300025159|Ga0209619_10540134Not Available571Open in IMG/M
3300025160|Ga0209109_10155098Not Available1150Open in IMG/M
3300025165|Ga0209108_10425904Not Available647Open in IMG/M
3300025289|Ga0209002_10485473Not Available685Open in IMG/M
3300025905|Ga0207685_10415099Not Available693Open in IMG/M
3300025907|Ga0207645_10161966All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1464Open in IMG/M
3300025910|Ga0207684_10325163Not Available1325Open in IMG/M
3300025922|Ga0207646_10119300All Organisms → cellular organisms → Bacteria2370Open in IMG/M
3300025922|Ga0207646_10148516All Organisms → cellular organisms → Bacteria2113Open in IMG/M
3300025922|Ga0207646_10341472Not Available1353Open in IMG/M
3300025926|Ga0207659_10663794Not Available891Open in IMG/M
3300025926|Ga0207659_11581159Not Available560Open in IMG/M
3300025930|Ga0207701_11334526All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300025937|Ga0207669_10214741All Organisms → cellular organisms → Bacteria1407Open in IMG/M
3300025937|Ga0207669_10795438Not Available784Open in IMG/M
3300025937|Ga0207669_11737263Not Available533Open in IMG/M
3300025941|Ga0207711_10556569All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1070Open in IMG/M
3300025942|Ga0207689_11825593Not Available501Open in IMG/M
3300025960|Ga0207651_10078876All Organisms → cellular organisms → Bacteria2364Open in IMG/M
3300025981|Ga0207640_11035331Not Available724Open in IMG/M
3300027818|Ga0209706_10308163Not Available749Open in IMG/M
3300027873|Ga0209814_10043960All Organisms → cellular organisms → Bacteria1861Open in IMG/M
3300027873|Ga0209814_10517151Not Available529Open in IMG/M
3300027903|Ga0209488_10146469All Organisms → cellular organisms → Bacteria1782Open in IMG/M
3300027903|Ga0209488_10222857All Organisms → cellular organisms → Bacteria1418Open in IMG/M
3300028379|Ga0268266_11761146Not Available594Open in IMG/M
3300028380|Ga0268265_10554406Not Available1092Open in IMG/M
3300028380|Ga0268265_12446600Not Available528Open in IMG/M
3300028381|Ga0268264_10310505All Organisms → cellular organisms → Bacteria1488Open in IMG/M
3300028768|Ga0307280_10179885Not Available741Open in IMG/M
3300028790|Ga0307283_10165059Not Available618Open in IMG/M
3300028824|Ga0307310_10352467Not Available724Open in IMG/M
3300029989|Ga0311365_11867336Not Available514Open in IMG/M
(restricted) 3300031150|Ga0255311_1160190Not Available502Open in IMG/M
3300031226|Ga0307497_10423019Not Available641Open in IMG/M
3300031232|Ga0302323_101209508Not Available845Open in IMG/M
3300031469|Ga0170819_11444725Not Available556Open in IMG/M
3300031474|Ga0170818_101638439Not Available720Open in IMG/M
3300031740|Ga0307468_100238927Not Available1267Open in IMG/M
3300031740|Ga0307468_100825475Not Available794Open in IMG/M
3300032002|Ga0307416_101674553Not Available741Open in IMG/M
3300032180|Ga0307471_103594084Not Available549Open in IMG/M
3300033004|Ga0335084_10113789All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales2813Open in IMG/M
3300033004|Ga0335084_11464888Not Available676Open in IMG/M
3300033433|Ga0326726_10219004All Organisms → cellular organisms → Bacteria1763Open in IMG/M
3300034150|Ga0364933_012614All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1971Open in IMG/M
3300034268|Ga0372943_0442275Not Available843Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.06%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.26%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere6.15%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.47%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.91%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.35%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.35%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.79%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.79%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.23%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.23%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.23%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.23%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere2.23%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.12%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.12%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.12%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.12%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.12%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.12%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil1.12%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen1.12%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.12%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.12%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.12%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.12%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.12%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.68%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.68%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.68%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.68%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.68%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.68%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.56%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.56%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.56%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.56%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.56%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.56%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.56%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.56%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.56%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.56%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.56%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.56%
WastewaterEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater0.56%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2199352025Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOILEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002122Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_2EnvironmentalOpen in IMG/M
3300002124Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_3EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005168Soil and rhizosphere microbial communities from Laval, Canada - mgLPCEnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006603Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009610Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300009873Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plantEngineeredOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011427Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2EnvironmentalOpen in IMG/M
3300011428Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2EnvironmentalOpen in IMG/M
3300011442Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012232Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2EnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012892Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1EnvironmentalOpen in IMG/M
3300012895Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2EnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017944Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MGEnvironmentalOpen in IMG/M
3300017947Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MGEnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300020002Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1EnvironmentalOpen in IMG/M
3300020034Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2EnvironmentalOpen in IMG/M
3300020064Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT27_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300025159Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3EnvironmentalOpen in IMG/M
3300025160Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2EnvironmentalOpen in IMG/M
3300025165Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1EnvironmentalOpen in IMG/M
3300025289Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027818Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028790Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300029989III_Fen_N1 coassemblyEnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031232Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3EnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300034150Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17EnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
deepsgr_022441402199352025SoilMSIVDDLIENLVERNVIQLNGTLNVSLVDGGVKVKGTLLSAVSDQKKNKTILNVNIPVDADVKIGEIVIPLPSIK
INPhiseqgaiiFebDRAFT_10478203123300000364SoilMSIVDDLIENLVERNVIQLNGTLNVSLVDGGVKVKGTLLSAVSDQKKNKTILNVNIPVDADVKIGEVVIPLPSIK*
F24TB_1136532113300000550SoilMSIVDDLIENLVERNAVRLKGTLGITLVDGGIRITGQVFSTLHDQKKNKDVLHARVPVNASVGVGDIVIPVPKIP*
F14TC_10302087723300000559SoilMSIVDDLIENLVERNAVRLKGTLGITLVDGGIRITGQVFSTLHDQKKNKDVLNVNIPVDAQVKVADVVIPLPKIQ*
JGI10216J12902_10152930613300000956SoilMSIVDDLIENLVERHSVTLNGAFTISLVDGGLKIKGQAFSALRDQKKNKAILNVGIPIDSEVTVGAIVVPLTPAK*
JGI10216J12902_10252625933300000956SoilMSIVDDLIENLVERNVVGLSGTFAVSLVDGGIRIKGQALSSLRDQKKNKTILNATIPVDAEMKVSALVIPLPAIK*
JGI10216J12902_11258820123300000956SoilMSIVDELIENLVERNVIKLNGTLKVSLVSGGVRVRGQLSSTLRDQKKNKDVLKAAIPVDASLKVGEIVIPLPQLK*
JGI10216J12902_11386205923300000956SoilMSIVDDLIENLVERNAVGLNGTFTIALVDGGLKVRGQVFSALRDQRKNKTILNVNIPVDADVKVGEIVIPVPQIP*
JGI12053J15887_1039459123300001661Forest SoilMSIVDDLIENLVERNAVQLNGTFTVALVDGGVKVKGTIFSTLSDQKKNKTILNASIPVDADVKVGDIVIPVPNIK*
C687J26623_1009098213300002122SoilMSIVDDLIENLVERNTVALNGAFTIALIEGGIKLKGEAFSTLRDQKKNRAILKISIPVDAEVRVGE
C687J26631_1000766063300002124SoilMSIVEDLIENLVERNAVDLSGAVTIALIDDGIKIKGRIFSTLRDQVKNKNLLNIDVPVDAEVKVGEIVIPLPNIP*
Ga0062593_10219434413300004114SoilMSIVDDLIENLVERNAVALNGAFTIALVDGGITIKGTALSTLRDQKKNKAILKVNIPVDAELKVGEIVIPLPDIP*
Ga0062591_10013211123300004643SoilMSIVDDLIENLVERNAVALNGAFTIVLVDGGITIKGTAFSTVRDKRKNKAVLKINIPIVADVKVGDIVIPLPDIP*
Ga0066809_1013495213300005168SoilMSIVDDLIENLVERNVIQLNGTLTVSLVEGGVKVKGTVFSTVADQKKNKNLLNVNIPVDADVKVGEIIVPLPSIK*
Ga0065704_1082450513300005289Switchgrass RhizosphereMSIVDDLIENLVERNAVTLNGAFTITLVDGGIRITGEALSILRDQKKNKAVLKINIPVDAEVKV
Ga0065705_1047168123300005294Switchgrass RhizosphereMSIVDDLVENLVERNAVGLNGAFSIALIDGGLKIKGNVLSTLRDQKKNKTILKISIPVDADVTVGEIVIALPKIP*
Ga0065707_1014503723300005295Switchgrass RhizosphereMSIVDDLIENLVERNAVTLNGAFTITLVDGGIRITGEALSILRDQKKNKAVLKINIPVDAEVKVGDIVVPLPRLP*
Ga0065707_1058075723300005295Switchgrass RhizosphereMSIVDDLVENLVERNAVGLNGAFSIALIDGGLKIKGNVLSTLRDQKKNKTILKISIPVDVDVTVGVIVIALPKIP*
Ga0070676_1011849833300005328Miscanthus RhizosphereMSIVDDLIENLVERNVIQLNGTLTVSLVDGGVKVKGTVLSTLADQKKNKNLLNVNIPVDADVKVGEIIVPLPSIK*
Ga0070690_10106183213300005330Switchgrass RhizosphereMSIVDDLIENLVERNVIQLNGTLNVSLVNGGVKVKGTLLSAVSDQKKNKTILNVNIPVDADVKIGEVVIPL
Ga0066388_10737472813300005332Tropical Forest SoilMSIVDDLVENLVERNAVGLNGTFRIALVDGGLKIKGDALSTLRDQKKNKTILKIGIPVDADVTVGEVVIALPKIP*
Ga0070666_1007214633300005335Switchgrass RhizosphereMSIVDDLIENLVERNVIQLNGTLTVSLVDGGVKVKGTVLSTVADQKKNKNLLNVNIPVDADVKVGEIIVPLPSIK*
Ga0070666_1080040713300005335Switchgrass RhizosphereMSIVDDLIENLVERNVVQLSGALTVTLTNGGVKVKGTLLSTLSDQKKNKTILNASIPVDADVKVGEIVIPLPNIK*
Ga0070675_10054264933300005354Miscanthus RhizosphereMSIVDDLIENLVERNVIKLNGTLKVSLVSGGVRVRGQLSSTLRDQKKNKDVLKAEVPVDTSVKVGEIVIPLPQLK*
Ga0070675_10077793813300005354Miscanthus RhizosphereMSIVDDLIENLVERNVIQLTGTLSVSLVDGGLKVKGTVLSNVIDQKKNKTILNVNVPVDADVKVGDIVIPIPNIP*
Ga0070674_10047390013300005356Miscanthus RhizosphereMSIVDDLIENLVERNVVQLSGALTVTLTNGGVKVKGTLLSTLSDQKKNKTIVNASIPVDADVKVGEIVIPLPNIK*
Ga0070701_1071104713300005438Corn, Switchgrass And Miscanthus RhizosphereVDDLIENLVERNVVQLNGTLTIALTDGGVKVKGTIFSTVSDQKKNKTLLNASIPVDADVKVGEIVIPLPNIK*
Ga0070694_10008922823300005444Corn, Switchgrass And Miscanthus RhizosphereMSIVDDLIENLVERNVVRLNGTLSIALIDGGVTVKGRVVSTVRDQKKNKDVLNINIPVDAEVKVAEIVVPVPSIP*
Ga0070694_10083721423300005444Corn, Switchgrass And Miscanthus RhizosphereMSLVDDLIENLVERNVVRLKGSLSITLVDGGVRVTGQVFSTLRDQKKNKDVLNVNIPVDAQLKVADVVIPLPKIQ*
Ga0070708_10134658523300005445Corn, Switchgrass And Miscanthus RhizosphereMSLVDDLIENLVERNAVTLKGTLGIALIDGGIKITGQVFSTLRDQKKNRDVLNINIPVDAQLKVADIVIPVPKIP*
Ga0070708_10184885823300005445Corn, Switchgrass And Miscanthus RhizosphereMSIVDDLVANLVERNAIALNGAFTIALVDGGITIKGTVFSTLRDKKKNRAILKINVPIAAELKVGDIVIPLPDIP*
Ga0070707_10017731713300005468Corn, Switchgrass And Miscanthus RhizosphereMSIVDDLIENLVERNAVKLRGSLSIALVDGGLKVTGHVFSTVIDQKKNKAILNVDAPVDADLKVSDVVIPLPSIK*
Ga0070698_10015347733300005471Corn, Switchgrass And Miscanthus RhizosphereMSIVDDLIENLVERNIVQLNGTLTVALVDGGVKVKGTILTTLSDQKKGKNLLNASIPVDADVKVGDIVIPVPNIK*
Ga0070684_10096818613300005535Corn RhizosphereMSIVDDLIENLVERNTVQLNGTLTIALVDGGVKVKGTILSTLSDQKKNKTLLNASIPVDADVKIGEVVIPLPNIK*
Ga0070672_10054122323300005543Miscanthus RhizosphereMSIVDDLIENLVERNVIQLNGTLTVSLVDGGVKVKGTVLSTVADQKKNKNLLNASIPVDADVKVGEIVIPLPNIK*
Ga0070686_10006248713300005544Switchgrass RhizosphereDDLIENLVERNVIQLNGTLTVSLVDGGVKVKGTVLSTVADQKKNKNLLNVNIPVDADVKVGEIIVPLPSIK*
Ga0070686_10033373533300005544Switchgrass RhizosphereMSIVDDLIENLIERNAVTLRGNLGITLVDGGIRITGQIFSTVRDQKKNKDILNADIPIDAQLGVSDVVIPLPKIQ*
Ga0070686_10184282323300005544Switchgrass RhizosphereMSIVDDLIQNLVERNAVGLNGAFTITLIDGGVSVKGQVFSAVRDQNKNKTILNVAIPVDAEVRVGAIVIPLPPIR*
Ga0070665_10205593023300005548Switchgrass RhizosphereMSIVDDLIENLVERNVVQLSGALTITLTNGGVKVKGALLSTLSDQKKNKALLNASIPVDADVKVGEIVIPLPNIK*
Ga0070704_10103175423300005549Corn, Switchgrass And Miscanthus RhizosphereMSIVDDLIENLVERNVVQLNGTLSMTLVDGGIKVKGTIFSTVSDQKKNKNLLNASIPVDADVKVGEIVIPLPNIK*
Ga0068854_10153801923300005578Corn RhizosphereMSIVDDLIENLVERNAVQLNGTLTIALTDGGVKVKGTIFSTVSDQKKNKTLVNASIPVDADVKVGEIVIPLPNIK*
Ga0066903_10006845443300005764Tropical Forest SoilMSIVDDLIENLVERNAIVLKGNLAITLVEGGVRVTGQVFSTIRDQKKNKDILNVGIPIDAQLGVADVVIPLPKIQ*
Ga0066903_10125659533300005764Tropical Forest SoilMSIVDDLVENLVERNVIQLNGTLNVTLVDGGVKVKGTLLSALSDQKKNKTILNVDIPVDADVRIGEVVIPLPSIK*
Ga0068863_10028811913300005841Switchgrass RhizosphereMSIVDDLIENLVERNVIQLNGTLSVSLVEGGVKVKGTVLSTVADQKKNKNLLNVNIPVDADVKVGEIVIPLPVIK*
Ga0068858_10038063513300005842Switchgrass RhizosphereMSIVDDLIENLVERNVIQLNGTLNVSLVNGGVKVKGTLLSAVSDQKKNKTILNVNIPVDADVKIGEVVIPLPSIK*
Ga0068860_10033446233300005843Switchgrass RhizosphereMSIVDDLIENLVERNVVQVNGTLTIALVDGGVKVKGSIFSTLSDQRKNKTLLNVSIPVDADVKVGDIVIPLPNIK*
Ga0075417_1021257123300006049Populus RhizosphereMSIVDDLVENLVERNAVGLNGAFSIALIDGGLKIKGNVLSTLRDQKKNKTILTISIPVDADVTVGEIVIALPKIP*
Ga0097621_10013082333300006237Miscanthus RhizosphereMSIVDDLIENLVERNVIQLNGTLNVSLVNGGVKVKGTLLSAVSDQKKNKTILNVNIPVDA
Ga0097621_10127688213300006237Miscanthus RhizosphereMSIVDDLIENLVERNVIQLNGTLSVSLVEGGVKVKGTVLSTVADQKKNKNLLNVNIPVDADVKV
Ga0068871_10242321113300006358Miscanthus RhizosphereESQAMSIVDDLIENLVERNVIQLTGTLSVSLVDGGLKVKGTVLSNVIDQKKNKTILNVNVPVDADVKVGDIVIPIPNIP*
Ga0074064_1179579033300006603SoilMSIVDDLIENLVERNVIQLNGTLNVSLVNGGVKVKGTLLSAVSDQKKNKTILNVNIPVDADVKIGEVVIPLP
Ga0075430_10072472113300006846Populus RhizosphereMSIVDDLIENLVERNAVALNGTFTVALVDGGIRVKGQVFSTVLDQRKNKTILKVDIPVDAELRVGEIVIPLPPIQ*
Ga0075430_10074530823300006846Populus RhizosphereMILDDLIENVVERHVVGLNGTFTISLVDGGVRVRGQILSVLRDQRKNKAKLNVNIPVGAEVRVGTIVIPLPPIK*
Ga0075433_1036493423300006852Populus RhizosphereMSIVDDLIENLVERNAVKLRGSLSIALVDGGLKVTGHVFSTVLDQKKNKTILNVDAPIDTDLKVSDVVIPLPPIK*
Ga0075425_10000967243300006854Populus RhizosphereMSIVDDLIENLVERNAVKLRGSLSIALVDGGLKVTGHVFSTVLDQKKNKTILNVDAPIDTDLRVSDVVIPLPPIK*
Ga0068865_10191728213300006881Miscanthus RhizosphereCMSIVDDLIENLVERNVVQLSGALTVTLTNGGVKVKGTLLSTLSDQKKNKTIVNASIPVDADVKVGEIVIPLPNIK*
Ga0075436_10069536223300006914Populus RhizosphereMSIVDDLIENLVERNAVKLRGSLSIALVDGGLKVTGHVFSTVLDQKKNKTILNVDAPIDTDLRVS
Ga0079218_1155739113300007004Agricultural SoilMPAEGSRGHLMSIVDELIENLVERNVIKLNGTLKVSLVSGGVRVRGQLSSTLRDQKKNKDVLKAEIPVDASLKVGEIVIPLPQLK*
Ga0105107_1042462323300009087Freshwater SedimentMSIVDDLIENLVERNVVTLKGTFTLALVDGGIRIRGDVLSSLRDQKKNRVILDTAVPIDAELRVGEVVIPLPTIK*
Ga0105245_1056553133300009098Miscanthus RhizosphereSPLTGPPRRASCMSIVDDLIENLVERNVVQVNGTLTIALVDGGVKVKGSIFSTLSDQRKNKTLLNVSIPVDADVKVGDIVIPLPNIK*
Ga0105247_1127410013300009101Switchgrass RhizosphereMSIVDDLIENLVERNVVQLNGTLTIALVDGGVKVKGTILSTVSDQKKNKNLLNVSIPVDADVKVGEVVIPLPNIK*
Ga0105248_1093065623300009177Switchgrass RhizosphereMSIVDDLIENLVERNAVVLSGALTVALVDGGLKIAGTVHSTVRDQKKNKNLLNVEIPVDAKVGIGDVVIPLPQIR*
Ga0105238_1033260543300009551Corn RhizosphereMSIVDDLIENLVERNVIQLNGTLTVSLVDGGVKVKGTVLSTLADQKKNKNLLNVNIPVDADVKVGQTLGV
Ga0105340_145059923300009610SoilMSIVDDLIENLVERNVLKLNGTLKVSLVSGGVRVRGQLSSTLRDQKKNKDVLKAEVPVDTSVKVGEIV
Ga0126313_1043550323300009840Serpentine SoilMSIVDDLIENLVERNALRLSGALSIKLIDGGVSVTGTLVSVVRDQRKNKDILKANIPVNAQVKVPDIVIPVPRIV*
Ga0131077_1001506473300009873WastewaterMSIVDDLIENLVERNVIRVNGTLSISLTQGGLSVKGQLFSTVRDQKRNKDILHVKAPVDADLRVGTIVVPLPQIR*
Ga0126315_1050324413300010038Serpentine SoilIVDDLIENLVERNALRLSGALSIKLIDGGVSVTGTVVSVVRDQRKNKDILKANIPINAQVKVPDIVIPVPQIV*
Ga0126314_1104464313300010042Serpentine SoilMSIVDDLIENLVERNALRLSGTLSIKLIDGGVNVTGTLVSVVRDQRKNKDILKANIPINAQVKVPDIVIPVPQIV*
Ga0126382_1049539923300010047Tropical Forest SoilMSIVDDLIENLVERNAIMLKGNLAITLVEGGVRVTGQVFSTVRDQKKNKDVLNVDIPIDAQLGVADVVIPLPKIQ*
Ga0134109_1029042513300010320Grasslands SoilDDLIENLVERNVIQLNGTLSVSLVEGGVKVKGTVLSTVADQKKNKNLLNVNIPVDADVKVGEIVIPLPAIK*
Ga0126372_1043859833300010360Tropical Forest SoilMSIVDDLIENLVERNAIMLKGNLAITLVEGGVRVTGQVFSTVRDQKKNKDVLNVDIPIDAQLGVADIVIPLPKIQ*
Ga0126377_1001803733300010362Tropical Forest SoilMSIVDDLIENLVERNAVKLRGSLSIALVDGGLKVTGHVFSTVVDQKKNKTILNVDAPIDTDLKVSDVVIPLPPIK*
Ga0126377_1011648923300010362Tropical Forest SoilMSIVDDLIENLVERNAIMLKGNLAITLVEGGVRVTGQVFSTIRDQKKNKDILNVGIPIDAQLGVADVVIPLPKIQ*
Ga0126377_1071058523300010362Tropical Forest SoilMSIVDDLIENLVERNAIRLKGNLGIALVDGGVRITGQVFSNLRDQKKNKDVLNVNIPVDAQVKVADVVIPLPKIQ*
Ga0136847_1006741823300010391Freshwater SedimentMSIVEDLIESLVERNAVDLSGTVTIALIDGGVKIKGRIFSTIRDQVKNKNLLNIDVPVDAEVKVGEIVIPLPNIP*
Ga0134127_1218659013300010399Terrestrial SoilMSIVDDLIENLVERNVVQLNGTLTIALVDGGVKVKGTIFSTVSDQKKNKTLLNASIPVDAEVKVAEVVIPLPNIK*
Ga0134122_1017124343300010400Terrestrial SoilMSIVDDLIENLVERNSVRLRGSLNIALVDGGLKVTGHVLSTVTDQKKNKTILNADAPVDVDLRVAEIVIPVPQIK*
Ga0134122_1087875523300010400Terrestrial SoilMSIVDDLIENLVERNAVKLRGAFNIALVDGGLKISGHVLSTVIDQKKNNKTILNVDAPVDADLRVAEIVIPVPQIK*
Ga0134122_1297659723300010400Terrestrial SoilMSIVDDLIENLVERNAVRLRGSLSIALVDGGLKVTGHVFSTVVDQKKNKTILNVDAPVDADLRVAEIVIPVPQIK*
Ga0105246_1189224823300011119Miscanthus RhizosphereMIVEEQGNGLTLEGHGMSIVDDLVENLVERNAVGLNGAFRIALIDGGLKIKGTVLSALRDQKKNKTILNISIPVDADVTVGEIVIALPKIP*
Ga0137448_122088323300011427SoilMSIVDDLIENLVERNVVQLNGTLNIALVDGGLKVKGTIFSTLSDQKKNKTLLNVNIPIDADVKVGGIVIPLPNIT*
Ga0137456_107697313300011428SoilMSIVDDLIENLVERNAVGLNGAFSIALIDGGLKIKGDVLSTLRDQKKNKTILKISIPVDAEVTVGDIVIGLPKIP*
Ga0137437_109922323300011442SoilMSIVDDLVENLVERNAVGLNGAFSIALIDGGLKIKGNILSTLQDQKKNKTILKISIPVDADVTVGEIVIALPKIP*
Ga0150985_10968236833300012212Avena Fatua RhizosphereMSIVDDLIENLVERNAVTLRGNLGIALVDGGIRITGQIFSTVRDQKKNKDVLSVDIPIDAQLGVADVVIPLPKIQ*
Ga0150985_11457076223300012212Avena Fatua RhizosphereMSIVDDLIENLVERNVIQLNGTLTVSLVDGGVKVKGTVLTNLIDQKKNKNILNVNIPVDADVKIGDVVIPLPSIK*
Ga0150985_12236249723300012212Avena Fatua RhizosphereMSIVDDLIENLVERNVIQLNGTLSVSLVEGGVKVKGTVLSTVADQKKNKNLLNVNIPVDADVKVGEIVIPLPIIK*
Ga0137435_100496333300012232SoilMSIVDDLVENLVERNAVGLNGAFSIALIDGGLKIKGNILSTLRDQKKNKTILKISIPVDADVTVGEIVIALPKIP*
Ga0137366_1118982813300012354Vadose Zone SoilLVERNVVQLNGTLTIALVDGGVKVKGTILSTLSDQRKNKNLLNVSIPVDADVKVGEVVIPLPNIK*
Ga0150984_10002624813300012469Avena Fatua RhizosphereLIENLVERNVIQLNGTLTVSLVDGGVKVKGTVLTNLIDQKKNKNILNVNIPVDADVKIGDVVIPLPSIK*
Ga0150984_10258150913300012469Avena Fatua RhizosphereMSIVDDLIENLVERNVIQLNGTLSVSLVEGGVKVRGTVLSTVADQKKNKNLLNVNIPVDADVKVGEIVIP
Ga0150984_12089149623300012469Avena Fatua RhizosphereMSIVDDLIENLVERNVIQLNGTLSVSLVEGGVKVKGTVLSTVADQKKNKNLLNVNIPVDADVKVGEIVIPLPAIK*
Ga0150984_12159595533300012469Avena Fatua RhizosphereLSPMSIVDDLIENLVERNAVTLRGNLGIALVDGGIRITGQIFSTVRDQKKNKDVLNVDIPIDAQLGVADVVIPLPKIQ*
Ga0137398_1085393423300012683Vadose Zone SoilENLVERNVVQLNGTVTIALVDGGVKVKGTIFSTVSDQKKNKNLLNVSIPVDADVKVGEVVIPLPNIK*
Ga0157294_1027892613300012892SoilMSIVDDLIENLVERNVIKLNGTLKVSLVSGGVRVRGQLSSTLRDQKKNKDVLKAEIPVDTSVKVG
Ga0157309_1001062423300012895SoilMSIVDDLIENLVERNVIKLNGTLKISLVSGGVRVRGQLSSTLRDQKKNKDVLKAEIPVDTSVKVGEIVIPLPQLK*
Ga0137394_1036257933300012922Vadose Zone SoilMSIVDDLIENLVERNAVKLRGSLNIALVDGGLKVTGHVFSTVVDQKKNKTILNVDAPVDVDLRVAEIVIPVPQIK*
Ga0126369_1352028413300012971Tropical Forest SoilIENLVERNVIQLNGTLTVSLVDGGVKVKGTVLPVLTDQKKNKTILNVSVPVDADVKIGEVVIPLPNIK*
Ga0157378_1054732423300013297Miscanthus RhizosphereMSIVDDLIENLVERNVVQVNGTLTIGLVDGGVKVKGTIFSTLSDQKKNKTLLNVSIPVDADVKVADIVIPLPNIK*
Ga0157380_1012485533300014326Switchgrass RhizosphereMSIVDDLVANLVERNAVALNGAFTIALVDGGITIKGTAFSTLRDQRKNKAILKINVPIVAELKVGNIVIPLPDIP*
Ga0157380_1036034623300014326Switchgrass RhizosphereMSIVDDLIENLVERNVIKLNGTLKVSLVSGGVRVRGQLSSTLRDQKKNKDVLKAEIPVDTSVKVGEIVIPLPQLK*
Ga0132258_1057069923300015371Arabidopsis RhizosphereMSIVDDLIENLVERNTVKLKGNLGIALVDGGIRVTGTVFSTVRDQKKNKDILNARIPVDAQLQVADTVIPLPKIQ*
Ga0132256_10056626123300015372Arabidopsis RhizosphereMSIVDDLVVNLVERNAVALNGAFTIALVDGGITVKGTAFSTLRDQKKNKAILKINVPVVAELKVGEIVIPLPDIP*
Ga0132256_10312216013300015372Arabidopsis RhizosphereLVERNVIQLTGTLSVSLVDGGLKVKGTVLSNVIDQKKNKTILNVNVPVDADVKVGDIVIPIPNIP*
Ga0132257_10285096113300015373Arabidopsis RhizosphereIENLVERNAVGLNGTFTIALIDGGFKIKGNALSTLRDEKKNKTILKISIPVEADVTVGEVVIALPEIP*
Ga0132255_10140882123300015374Arabidopsis RhizosphereMSIVDDLIENLVERNAVKLRGAFNIALVDGGLKISGHVLSTVIDQKKNKTILNVDAPVDADLRVGEIVIPVPQIK*
Ga0132255_10598136013300015374Arabidopsis RhizosphereMSIVDDLIENLVERNVIQLNGTLTVSLVDGGVKVKGTVFSTVADQKKNKNLLNVNIPVDADVKVGEIIVPLPSIK*
Ga0163161_1107576723300017792Switchgrass RhizosphereMSIVDDLIENLVERNVIQLNGTLTVSLVDGGVKVKGTVLSTVADQKKNKNLLNVNIPVDADVKVGEIIVPLPSIK
Ga0187786_1042949523300017944Tropical PeatlandMSIVDDLIENLVERNVIQLNGTLNVSLVDGGVKVKGTLLSALSDQKKNKTILNVNIPVDADVRIGEVVIPVPSLK
Ga0187785_1039121713300017947Tropical PeatlandIVDDLIENLVERNVIQLNGTLTVSLVDGGVKVKGTVFSTVSDQKKNKNILNVNVPVDADVRIGEVVVPLPSIK
Ga0184610_122737513300017997Groundwater SedimentERNAIDLNGTFTVALVDGGLKVKGTLFSTVRDQKKNKNLLNVAVPVDADVKVGEFVIPLPPIA
Ga0184608_1014954623300018028Groundwater SedimentMSIVDDLIENFVDRNAVALNGAFTIALVDGGITVKGTVFSTLRDQKKNRALLKINVPVVAELKVGDIVIPLPDIP
Ga0184638_100815523300018052Groundwater SedimentMSIVDDLVENLVERNAVGLNGAFSIALIDGGLKIKGNVLSTLRDQKKNKTILKISIPVDADVTVGEIVIALPKIP
Ga0184611_110537423300018067Groundwater SedimentMSIVDDLIENLVERNVVQLSGALTVTLTNGGVKVKGTLLSTLSDQKKNKTILNASIPVDADVKVGEIVIPLPNIK
Ga0184611_115836623300018067Groundwater SedimentMSIVDDLIENLVERNVIKLNGTLKVSLVSGGVRVRGQLSSTLRDQKKNKDVLKAEIPVDTSVKVGEIVIPLPQLK
Ga0184635_1031500923300018072Groundwater SedimentMSIVDDLIENLVERNVLKLNGTLKVSLVSGGVRVRGQLSSTLRDQKKNKDVLKAEVPVDTSVKVGEIVIPLPQLK
Ga0184609_1034827123300018076Groundwater SedimentMSIVDDLIENFVDRNAVALNGAFTIALVDGGITVKGTVFSTLRDQKKNRVILKINVPLIAELKVGDIVIPLPDIP
Ga0190272_1165857813300018429SoilVISFRSTQEDGYMSIIDDLIENLVERHSVTLNGAFTIALIDGGLKVKGQAYSTLRDQKKNKAILNVGIPIDSEVTVGKIVIPLPGVK
Ga0190274_1215882223300018476SoilMSIVDDLIENLVERNAVALNGAFTIALVDGGITIKGTAFSTVRDKRKDKAVLKINIPIVAEVKVGDIVIPLPDIP
Ga0190274_1332781213300018476SoilMSIVDDLIENLVERNVVQLNGTLTIALVDGGVKVKGTVLSTLSDQKKNKTLLNVSIPVDADVKVGEVVIPLPNIK
Ga0190271_1155837023300018481SoilMPAEGSRGHLMSIVDELIENLVERNVIKLNGTLKVSLVSGGVRVRGQLSSTLRDQKKNKDVLKAEIPVDASLKVGEIVIPLPQLK
Ga0190271_1382530013300018481SoilIRCQHLSPTGDAYMSIVDELIEHLVERNVVGLNGTFTVTLVDGGIRIKGQALTSLRDQKKNKTILNATIPVDAEMKVSPLVIPLPQIK
Ga0190273_1122744623300018920SoilMSIVDDLIENLVERNAVALNGAFTIVLVDGGITIKGTAFSTVRDKRKNKAVLKINIPIVADVRVGDIVIPLPDIP
Ga0190264_1089488923300019377SoilMSIVDDLIENLVERNTVGLNGTFTIALIDGGIKVKGQVFSTLQDQKRNKTVLKVDIPVDAEVRVGEVVIPVPPIQ
Ga0193723_102871423300019879SoilMSIVDDLIENLVERNAIDLNGTFTVALVDGGLKVKGTVFSTVRDQKKNKNLLNVSIPVDADVKVGDVVIPLPPIP
Ga0193730_101876733300020002SoilMSIVDDLIENLVERNAVQLNGTFTVALVDGGVKVKGTIFSTLSDQKKNKTILNANIPVDADVKVGDIVIPVPNIK
Ga0193753_1025420823300020034SoilMNVVQLNGTLTIALVDGGVKVKGTVLSTLSDQKKNKNLLNVSIPVDADVKVGEVVIPLPNIK
Ga0180107_119015913300020064Groundwater SedimentLCMSIVDDLIENLAERNTVKLHGALSIALVDGGVTTKGRLFSTLRDQKKNKDVLKVEIPVDATVKVGEIVIPLPQLK
Ga0210378_1012644633300021073Groundwater SedimentMSIVDDLVENLVERNAVGLNGAFSIALIDGGLKIKGNVLSTLRDQKKNKTILRISIPVDADVTVGEIVIALPKIP
Ga0210378_1035259023300021073Groundwater SedimentMSIVDDLIENFVDRNAVALNGAFTIALVDGGITVKGTVFSTLRDQKKNRAILKINVPVVAELKVGDIVIPLPDIP
Ga0210380_1007692733300021082Groundwater SedimentMSIVDDLIENLVERNVIQLNGTLTVSLVDGGVKVKGTVFSTVADQKKNKNLLNVNIPVDADVKVGEIIVPLPSIK
Ga0193719_1018439233300021344SoilMSIVDDLIENLVERNAIDLNGTFTVALVDGGLKVKGTVFSTVRDQKKNKNLLNVSIPVDADVKVGEVVIPLPPIP
Ga0193699_1032598123300021363SoilMSIVDDLIINLVERNAVALNGAFTLALVDGGITLKGTVFSSLRDKNKNKAILKINVPIVAEVKVGDIVIPLPDIP
Ga0209619_1054013423300025159SoilMSIVDDLIENLVERNTVALNGAFTIALIEGGIKLKGEAFSTLRDQKKNRAILKISIPVDAEVR
Ga0209109_1015509813300025160SoilMSIVEDLIENLVERNAVDLSGAVTIALIDDGIKIKGRIFSTLRDQVKNKNLLNIDVPVDAEVKVGEIVIPLPNIP
Ga0209108_1042590413300025165SoilEDCCMSIVDDLIENLVERNTVALNGAFTIALIEGGIKLKGEAFSTLRDQKKNRAILKISIPVDAEVRVGEIVVPLSETP
Ga0209002_1048547323300025289SoilMSIVDDLIENLVERNTVALNGAFTIALIEGGIKLKGEAFSTLRDQKKNRAILKISIPVDAEVRVGEIVVPLSETP
Ga0207685_1041509913300025905Corn, Switchgrass And Miscanthus RhizosphereRARATGPESRATRMSIVDDLIENLVERNVIQLNGTLNVSLVNGGVKVKGTLLSAVSDQKKNKTILNVNIPVDADVKIGEVVIPLPSIK
Ga0207645_1016196633300025907Miscanthus RhizosphereMSIVDDLIENLVERNVIQLNGTLTVSLVDGGVKVKGTVLSTLADQKKNKNLLNVNIPVDADVKVGEIIVPLPSIK
Ga0207684_1032516313300025910Corn, Switchgrass And Miscanthus RhizosphereMSIVDDLVENLVERNAVALNGAFTIALVDGGITIKGTVFSTLRDKKKNRAILKINVPIAAELKV
Ga0207646_1011930043300025922Corn, Switchgrass And Miscanthus RhizosphereMSIVDDLIENLVERNAVKLRGSLSIALVDGGLKVTGHVFSTVIDQKKNKAILNVDAPVDADLKVSDVVIPLPSIK
Ga0207646_1014851633300025922Corn, Switchgrass And Miscanthus RhizosphereMSIVDDLIENLVERNVVRLNGTLSIALIDGGVTVKGRVVSTVRDQKKNKDVLNINIPVDAEVKVAEIVVPVPSIP
Ga0207646_1034147223300025922Corn, Switchgrass And Miscanthus RhizosphereMSIVDDLVENLVERNAVALNGAFTIALVDGGITIKGTVFSTLRDKKKNRAILKINVPIAAELKVGDIVIPLPDIP
Ga0207659_1066379423300025926Miscanthus RhizosphereMSIVDDLIENLVERNVIKLNGTLKVSLVSGGVRVRGQLSSTLRDQKKNKDVLKAEVPVDTSVKVGEIVIPLPQLK
Ga0207659_1158115923300025926Miscanthus RhizosphereMSIVDDLIENLVERNVIQLTGTLSVSLVDGGLKVKGTVLSNVIDQKKNKTILNVNVPVDADVKVGDIVIPIPNIP
Ga0207701_1133452623300025930Corn, Switchgrass And Miscanthus RhizosphereMSIVDDLIQNLVERNAVGLNGAFTITLIDGGVSVKGQVFSAVRDQNKNKTILNVAIPVDAEVRVGAIVIPDSEPGIYSDLLKPQ
Ga0207669_1021474133300025937Miscanthus RhizosphereASMSIVDDLIENLVERNVIQLNGTLTVSLVDGGVKVKGTVLSTLADQKKNKNLLNVNIPVDADVKVGEIIVPLPSIK
Ga0207669_1079543823300025937Miscanthus RhizosphereMSIVDDLIENLVERNVIKLNGTLKISLVSGGVRVRGQLSSTLRDQKKNKDVLKAEVPVDTSVKVGEIVIPLPQLK
Ga0207669_1173726323300025937Miscanthus RhizosphereMSIVDDLIENLVERNVVQLSGALTVTLTNGGVKVKGTLLSTLSDQKKNKTIVNASVPVDADVKVGEIVIPLPNIT
Ga0207711_1055656923300025941Switchgrass RhizosphereMSIVDDLIENLVERNAVVLSGALTVALVDGGLKIAGTVHSTVRDQKKNKNLLNVEIPVDAKVGIGDVVIPLPQIR
Ga0207689_1182559313300025942Miscanthus RhizosphereVHLIRRPSPRPLTTDHHEGFLMSIVDDLIENLVERNVVQLSGALTITLTNGGVKVKGALLSTLSDQKKNKALLNASIPVDADVKVGEIVIPLPNIK
Ga0207651_1007887633300025960Switchgrass RhizosphereMSIVDDLIENLVERNVIQLNGTLSVSLVEGGVKVKGTVLSTVADQKKNKNLLNVNIPVDADVKVGEIVIPLPVIK
Ga0207640_1103533123300025981Corn RhizosphereMSIVDDLIENLVERNAVQLNGTLTIALTDGGVKVKGTIFSTVSDQKKNKTLVNASIPVDADVKVGEIVIPLPNIK
Ga0209706_1030816313300027818Freshwater SedimentMSIVDDLIENLVERNVVTLKGTFTLALVDGGIRIRGDVLSSLRDQKKNRVILDTAVPIDAELRVGEVVIPLPTIK
Ga0209814_1004396023300027873Populus RhizosphereMSIVDDVIENLVERNVVRLNGTLSVALIDGGVTVKGRVVSTVRDQKKNKDVLNINIPVDAEVKVAEIVVPVPSIP
Ga0209814_1051715123300027873Populus RhizosphereMSIVDDLVENLVERNAVGLNGAFSIALIDGGLKIKGNVLSTLRDQKKNKTILTISIPVDADVTVGEIVIALPKIP
Ga0209488_1014646913300027903Vadose Zone SoilMSIVDDLIENLVERNAVQLNGTFTVALVDGGVKVKGTIFSTLSDQKKNKTILNASIPVDADVKVGDIVIPVPNIK
Ga0209488_1022285713300027903Vadose Zone SoilMSIVDDLIENLVERNVVQLNGTLTIALVDGGVKVKGTILSTLSDQKKNKNLLNVSIPVDADVNVGEVVIPLPNIK
Ga0268266_1176114623300028379Switchgrass RhizosphereMSIVDDLIENLVERNVVQLSGALTITLTNGGVKVKGALLSTLSDQKKNKALLNASIPVDADVKVGEIVIPLPNIK
Ga0268265_1055440623300028380Switchgrass RhizosphereMSIVDDLIENLVERNVVQLNGTLTIALTDGGVKVKGTIFSTVSDQKKNKTLLNASIPVDAEMKVGEIVIPLPNIK
Ga0268265_1244660013300028380Switchgrass RhizosphereMSIVDDLIENLVERNVVGLNGTFTVSLVDGGVRIKGQALSVLRDQKKNKTILNATIPVDAEMKVSELVIPLPQIK
Ga0268264_1031050513300028381Switchgrass RhizosphereMSIVDDLIENLVERNVVQVNGTLTIALVDGGVKVKGSIFSTLSDQRKNKTLLNVSIPVDADVKVGDIVIPLPNIK
Ga0307280_1017988523300028768SoilFLMSIVDDLIENLVERNVVQLSGALTVTLTNGGVKVKGTLLSTLSDQKKNKTILNASIPVDADVKVGEIVIPLPNIK
Ga0307283_1016505913300028790SoilMSIVDDLIENLVERNVVQLSGALTVTLTNGGVKVKGTLLSTLSDQKKNKTILNASIPVDADVKVGEIV
Ga0307310_1035246723300028824SoilMSIVDDLIENLVERNAIDLNGTFTIALVDGGAKIKGTLFSTVRDQKKNKNLLNVGIPVDADVKVGDLVIPMPPIP
Ga0311365_1186733623300029989FenMSIVDDLIENLVERNAIELQGTLTISLIDGGVKVTGTVVSTVRDQRRSKNILNVNIPVDAEVTVGDIVIPLPPIP
(restricted) Ga0255311_116019013300031150Sandy SoilMSIVDDLIVNLVERNAVALNGAFTIALVDGGITLKGTVFSTLRDKNKNKALLKINIPVVADLKVGGIVIPLPDIP
Ga0307497_1042301913300031226SoilMSIVDDLIENLVERNVIQLNGTLNVSLVDGGVKVKGTLLSTVADQKKNKTLLNVNIPVDADVKVGEIIVPLPVIK
Ga0302323_10120950813300031232FenLVERNAIELQGTLTISLIDGGVKVTGTVVSTVRDQRRSKNILNVNIPVDAEVTVGDIVIPLPPIP
Ga0170819_1144472513300031469Forest SoilIVDDLIENLVERNVVQLNGTLTIALVNGGVKVKGTILSTLSDQKKNKNLLNVSIPVDADVKVGEVVIPLPNIK
Ga0170818_10163843913300031474Forest SoilRQSQEGFRMSIVDDLIENLVERNVVQLNGTLTIALVNGGVKVKGTILSTLSDQKKNKNLLNVSIPVDADVKVGEVVIPLPNIK
Ga0307468_10023892713300031740Hardwood Forest SoilMSIVDDLVENLVERNAVGLNGTFTIAFVDGGLKVRGQVFSTLRDQRKNKTILNVNIPVDADVKVGEIIIPVPPIP
Ga0307468_10082547523300031740Hardwood Forest SoilMSIVDDLIENLVERNAVALNGAFTIVLVDGGITIKGTAFSTVRDKRKNKAVLKINIPIVADVKVGDIVIPLPDIP
Ga0307416_10167455313300032002RhizosphereMILDDLIENVVERHVVGLNGTFTISLVDGGVRVRGQILSVLRDQRKNKAKLNVNIPVGAEVRVGTIVIPLPPIK
Ga0307471_10359408413300032180Hardwood Forest SoilGSQSLEEERMSIVDDLVANLVERNAIALNGAFTIALVDGGITVKGTVFSTLRDQKKNKAILKINVPVVAELKVGDIVIPLPDIP
Ga0335084_1011378933300033004SoilMSIVDDLIENLVERNVIQLNGTLTVSLVDGGVTVKGTLLSALSDQKKNKTILNVNIPVDADVRIGEIVIPVPSIK
Ga0335084_1146488813300033004SoilMSVVDDLIENLVERNVIQLNGTLTVSLVDGGVKVRGTLQSTLTDTKKNRNILNVSIPVDADVRIGGVTIPVPVLT
Ga0326726_1021900433300033433Peat SoilMSIVDDLIENLVERNVIQLNGTLTVSLVDGGVKVKGTLLSALSDQKKNKTILNVNIPVDADVRIGEVVIPVPSLK
Ga0364933_012614_685_9123300034150SedimentMSIVDDLIENLVERNVIQLNGTLTVSLVDGGVKVKGTVFSTVADQKKNKNLLNVNIPVDADVKVGDIIVPLPSIK
Ga0372943_0442275_565_7923300034268SoilMSIVDDLIENLVERNVVQLNGTLTISLIDGGVKVKGTILSTISDQKKNKTLLNASIPVDADVKVGDIVIPLPNIK


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