Metagenome / Metatranscriptome Family F032205

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F032205
Family Type	Metagenome / Metatranscriptome
Number of Sequences	180
Average Sequence Length	59 residues
Representative Sequence	MPELFLLRTVLRTLSVVLGGFGVFYLILSWSAPALWGLALVLIGAASGIDYFLDR
Number of Associated Samples	110
Number of Associated Scaffolds	180

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.17 %
% of genes near scaffold ends (potentially truncated)	36.11 %
% of genes from short scaffolds (< 2000 bps)	82.22 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (45.000 % of family members)
Environment Ontology (ENVO)	Unclassified (53.889 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (46.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.04% β-sheet: 0.00% Coil/Unstructured: 40.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 180 Family Scaffolds
PF13692	Glyco_trans_1_4	11.11
PF09557	DUF2382	7.22
PF03992	ABM	6.67
PF00534	Glycos_transf_1	6.11
PF03928	HbpS-like	5.56
PF01554	MatE	4.44
PF04461	DUF520	2.78
PF00107	ADH_zinc_N	1.11
PF04029	2-ph_phosp	1.11
PF01370	Epimerase	1.11
PF03693	ParD_antitoxin	0.56
PF01555	N6_N4_Mtase	0.56
PF00583	Acetyltransf_1	0.56
PF13565	HTH_32	0.56
PF03473	MOSC	0.56
PF01135	PCMT	0.56
PF04828	GFA	0.56
PF00691	OmpA	0.56
PF13531	SBP_bac_11	0.56

COG ID	Name	Functional Category	% Frequency in 180 Family Scaffolds
COG1666	Cyclic di-GMP-binding protein YajQ, UPF0234 family	Signal transduction mechanisms [T]	2.78
COG2045	Phosphosulfolactate phosphohydrolase or related enzyme	Coenzyme transport and metabolism [H]	2.22
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.56
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.56
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.56
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.56
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.56
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.56
COG3609	Transcriptional regulator, contains Arc/MetJ-type RHH (ribbon-helix-helix) DNA-binding domain	Transcription [K]	0.56
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.56
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.56

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.00 %
Unclassified	root	N/A	45.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.00 %
Unclassified	root	N/A	45.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.00 %
Unclassified	root	N/A	45.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	41.11 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.22 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	35.56 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.22 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.11 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.56 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.00 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	6.11 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.11 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2.22 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.22 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.11 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.11 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	2.22 %
Parvibaculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae	1.67 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.11 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.56 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.11 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.22 %
Rhodoligotrophos	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos	1.67 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.11 %
Lichenicola	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Lichenicola	0.56 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.11 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.22 %
Rhodoligotrophos defluvii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos → Rhodoligotrophos defluvii	1.67 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.11 %
Lichenicola cladoniae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Lichenicola → Lichenicola cladoniae	0.56 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.56 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003218\|JGI26339J46600_10024711	All Organisms → cellular organisms → Bacteria	1725	Open in IMG/M
3300004080\|Ga0062385_10316785	Not Available	901	Open in IMG/M
3300004082\|Ga0062384_100028618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2483	Open in IMG/M
3300004152\|Ga0062386_100019402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4948	Open in IMG/M
3300004152\|Ga0062386_101365081	Not Available	590	Open in IMG/M
3300005174\|Ga0066680_10634211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	665	Open in IMG/M
3300005332\|Ga0066388_100578101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1749	Open in IMG/M
3300005332\|Ga0066388_101279633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1262	Open in IMG/M
3300005332\|Ga0066388_106089901	Not Available	609	Open in IMG/M
3300005332\|Ga0066388_106896047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	572	Open in IMG/M
3300005332\|Ga0066388_107208301	Not Available	559	Open in IMG/M
3300005764\|Ga0066903_102599434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	981	Open in IMG/M
3300005764\|Ga0066903_106355768	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300006050\|Ga0075028_101031600	Not Available	513	Open in IMG/M
3300006797\|Ga0066659_11139469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	652	Open in IMG/M
3300009012\|Ga0066710_101981410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	865	Open in IMG/M
3300009038\|Ga0099829_10387941	All Organisms → cellular organisms → Bacteria → Proteobacteria	1153	Open in IMG/M
3300009088\|Ga0099830_10073351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2489	Open in IMG/M
3300009089\|Ga0099828_10526015	Not Available	1066	Open in IMG/M
3300009137\|Ga0066709_101824547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	852	Open in IMG/M
3300009137\|Ga0066709_103441845	Not Available	574	Open in IMG/M
3300010048\|Ga0126373_10491052	Not Available	1269	Open in IMG/M
3300010048\|Ga0126373_10511592	All Organisms → cellular organisms → Bacteria → Proteobacteria	1244	Open in IMG/M
3300010048\|Ga0126373_12260979	Not Available	604	Open in IMG/M
3300010048\|Ga0126373_12460854	Not Available	580	Open in IMG/M
3300010360\|Ga0126372_10234590	Not Available	1560	Open in IMG/M
3300010360\|Ga0126372_12307482	Not Available	588	Open in IMG/M
3300010361\|Ga0126378_10691789	Not Available	1132	Open in IMG/M
3300010361\|Ga0126378_11827427	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300010376\|Ga0126381_100074230	All Organisms → cellular organisms → Bacteria → Proteobacteria	4254	Open in IMG/M
3300010376\|Ga0126381_100736562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1412	Open in IMG/M
3300010376\|Ga0126381_101377451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1020	Open in IMG/M
3300010376\|Ga0126381_101944132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	848	Open in IMG/M
3300010376\|Ga0126381_104472863	Not Available	540	Open in IMG/M
3300010376\|Ga0126381_104901087	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300011271\|Ga0137393_11540231	Not Available	554	Open in IMG/M
3300016294\|Ga0182041_11574613	Not Available	606	Open in IMG/M
3300016294\|Ga0182041_11740688	Not Available	577	Open in IMG/M
3300016357\|Ga0182032_10321983	Not Available	1228	Open in IMG/M
3300016371\|Ga0182034_10063645	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2498	Open in IMG/M
3300016387\|Ga0182040_11331966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300016404\|Ga0182037_10469660	Not Available	1049	Open in IMG/M
3300016422\|Ga0182039_10325013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1283	Open in IMG/M
3300016422\|Ga0182039_10944052	Not Available	772	Open in IMG/M
3300016422\|Ga0182039_11816518	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300016422\|Ga0182039_12141657	Not Available	515	Open in IMG/M
3300017823\|Ga0187818_10334483	Not Available	667	Open in IMG/M
3300017942\|Ga0187808_10288271	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300017943\|Ga0187819_10075488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2008	Open in IMG/M
3300017955\|Ga0187817_10198358	All Organisms → cellular organisms → Bacteria → Proteobacteria	1279	Open in IMG/M
3300017966\|Ga0187776_11294612	Not Available	551	Open in IMG/M
3300018058\|Ga0187766_10387438	Not Available	922	Open in IMG/M
3300018085\|Ga0187772_10035318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2996	Open in IMG/M
3300020580\|Ga0210403_10017383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5749	Open in IMG/M
3300020580\|Ga0210403_10762110	Not Available	772	Open in IMG/M
3300020581\|Ga0210399_10372886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1191	Open in IMG/M
3300021432\|Ga0210384_10561198	Not Available	1027	Open in IMG/M
3300021444\|Ga0213878_10527037	Not Available	521	Open in IMG/M
3300021476\|Ga0187846_10001338	All Organisms → cellular organisms → Bacteria	13921	Open in IMG/M
3300021476\|Ga0187846_10039677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2106	Open in IMG/M
3300021476\|Ga0187846_10102817	Not Available	1228	Open in IMG/M
3300021476\|Ga0187846_10132026	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300021476\|Ga0187846_10149605	Not Available	989	Open in IMG/M
3300021476\|Ga0187846_10269475	Not Available	706	Open in IMG/M
3300021476\|Ga0187846_10299532	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300021476\|Ga0187846_10338448	Not Available	621	Open in IMG/M
3300021478\|Ga0210402_10876533	Not Available	824	Open in IMG/M
3300021560\|Ga0126371_10051964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3924	Open in IMG/M
3300021560\|Ga0126371_10153745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2364	Open in IMG/M
3300021560\|Ga0126371_10550053	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300022533\|Ga0242662_10252235	Not Available	573	Open in IMG/M
3300022726\|Ga0242654_10072080	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300026959\|Ga0207852_1036258	Not Available	502	Open in IMG/M
3300027698\|Ga0209446_1005131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3228	Open in IMG/M
3300027729\|Ga0209248_10071416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1055	Open in IMG/M
3300027783\|Ga0209448_10003750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4700	Open in IMG/M
3300027783\|Ga0209448_10144606	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300027783\|Ga0209448_10151950	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300027824\|Ga0209040_10167160	Not Available	1172	Open in IMG/M
3300027875\|Ga0209283_10474298	Not Available	808	Open in IMG/M
3300030844\|Ga0075377_11650894	Not Available	553	Open in IMG/M
3300031057\|Ga0170834_112306161	Not Available	569	Open in IMG/M
3300031231\|Ga0170824_102329646	Not Available	1018	Open in IMG/M
3300031231\|Ga0170824_103306119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1410	Open in IMG/M
3300031231\|Ga0170824_110167028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1408	Open in IMG/M
3300031231\|Ga0170824_121469450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1071	Open in IMG/M
3300031231\|Ga0170824_124152894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	849	Open in IMG/M
3300031446\|Ga0170820_11797022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	773	Open in IMG/M
3300031469\|Ga0170819_15772687	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	834	Open in IMG/M
3300031543\|Ga0318516_10014243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3922	Open in IMG/M
3300031543\|Ga0318516_10020788	All Organisms → cellular organisms → Bacteria → Proteobacteria	3348	Open in IMG/M
3300031543\|Ga0318516_10087234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1749	Open in IMG/M
3300031543\|Ga0318516_10157255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1307	Open in IMG/M
3300031544\|Ga0318534_10345861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	856	Open in IMG/M
3300031545\|Ga0318541_10160101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1238	Open in IMG/M
3300031545\|Ga0318541_10250231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	985	Open in IMG/M
3300031546\|Ga0318538_10633950	Not Available	580	Open in IMG/M
3300031546\|Ga0318538_10773169	Not Available	521	Open in IMG/M
3300031561\|Ga0318528_10650741	Not Available	565	Open in IMG/M
3300031564\|Ga0318573_10108477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Lichenicola → Lichenicola cladoniae	1431	Open in IMG/M
3300031564\|Ga0318573_10110733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1417	Open in IMG/M
3300031572\|Ga0318515_10044525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos → Rhodoligotrophos defluvii	2214	Open in IMG/M
3300031572\|Ga0318515_10186591	Not Available	1110	Open in IMG/M
3300031572\|Ga0318515_10199381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1072	Open in IMG/M
3300031572\|Ga0318515_10280182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	894	Open in IMG/M
3300031573\|Ga0310915_10335874	Not Available	1070	Open in IMG/M
3300031573\|Ga0310915_10398273	Not Available	977	Open in IMG/M
3300031573\|Ga0310915_11142317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	540	Open in IMG/M
3300031640\|Ga0318555_10082242	All Organisms → cellular organisms → Bacteria	1678	Open in IMG/M
3300031668\|Ga0318542_10002038	All Organisms → cellular organisms → Bacteria → Proteobacteria	6269	Open in IMG/M
3300031668\|Ga0318542_10521851	Not Available	618	Open in IMG/M
3300031679\|Ga0318561_10001770	All Organisms → cellular organisms → Bacteria → Proteobacteria	7785	Open in IMG/M
3300031680\|Ga0318574_10049823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2199	Open in IMG/M
3300031680\|Ga0318574_10123654	Not Available	1453	Open in IMG/M
3300031681\|Ga0318572_10585309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	665	Open in IMG/M
3300031682\|Ga0318560_10408325	Not Available	735	Open in IMG/M
3300031708\|Ga0310686_109246906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4864	Open in IMG/M
3300031713\|Ga0318496_10363358	Not Available	800	Open in IMG/M
3300031719\|Ga0306917_11376611	Not Available	545	Open in IMG/M
3300031736\|Ga0318501_10456638	Not Available	694	Open in IMG/M
3300031751\|Ga0318494_10441700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	756	Open in IMG/M
3300031753\|Ga0307477_10017007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4964	Open in IMG/M
3300031763\|Ga0318537_10143787	Not Available	888	Open in IMG/M
3300031763\|Ga0318537_10296863	Not Available	598	Open in IMG/M
3300031764\|Ga0318535_10316408	Not Available	698	Open in IMG/M
3300031769\|Ga0318526_10423934	Not Available	544	Open in IMG/M
3300031769\|Ga0318526_10471996	Not Available	512	Open in IMG/M
3300031770\|Ga0318521_10059437	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2002	Open in IMG/M
3300031770\|Ga0318521_10551817	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	695	Open in IMG/M
3300031779\|Ga0318566_10077777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1609	Open in IMG/M
3300031780\|Ga0318508_1047937	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300031792\|Ga0318529_10014377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3030	Open in IMG/M
3300031792\|Ga0318529_10026171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos → Rhodoligotrophos defluvii	2377	Open in IMG/M
3300031798\|Ga0318523_10355320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	729	Open in IMG/M
3300031846\|Ga0318512_10132804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1192	Open in IMG/M
3300031846\|Ga0318512_10350059	Not Available	739	Open in IMG/M
3300031879\|Ga0306919_10034276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos → Rhodoligotrophos defluvii	3232	Open in IMG/M
3300031880\|Ga0318544_10101890	Not Available	1082	Open in IMG/M
3300031890\|Ga0306925_10076140	All Organisms → cellular organisms → Bacteria → Proteobacteria	3538	Open in IMG/M
3300031890\|Ga0306925_10310649	All Organisms → cellular organisms → Bacteria	1695	Open in IMG/M
3300031893\|Ga0318536_10130593	Not Available	1271	Open in IMG/M
3300031893\|Ga0318536_10384917	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	709	Open in IMG/M
3300031894\|Ga0318522_10036535	All Organisms → cellular organisms → Bacteria	1688	Open in IMG/M
3300031894\|Ga0318522_10279681	Not Available	633	Open in IMG/M
3300031896\|Ga0318551_10113729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1452	Open in IMG/M
3300031896\|Ga0318551_10333764	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	856	Open in IMG/M
3300031897\|Ga0318520_10086972	Not Available	1730	Open in IMG/M
3300031897\|Ga0318520_10208179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1155	Open in IMG/M
3300031910\|Ga0306923_10240299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2072	Open in IMG/M
3300031910\|Ga0306923_10392451	All Organisms → cellular organisms → Bacteria	1580	Open in IMG/M
3300031912\|Ga0306921_10249279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2081	Open in IMG/M
3300031941\|Ga0310912_10127873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1899	Open in IMG/M
3300031941\|Ga0310912_10425901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1034	Open in IMG/M
3300031941\|Ga0310912_10931453	Not Available	668	Open in IMG/M
3300031942\|Ga0310916_10874187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	755	Open in IMG/M
3300031945\|Ga0310913_10830760	Not Available	651	Open in IMG/M
3300031946\|Ga0310910_10270227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1333	Open in IMG/M
3300031947\|Ga0310909_10826362	Not Available	764	Open in IMG/M
3300031947\|Ga0310909_11199503	Not Available	614	Open in IMG/M
3300031954\|Ga0306926_11321421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	841	Open in IMG/M
3300031962\|Ga0307479_10515806	Not Available	1179	Open in IMG/M
3300031981\|Ga0318531_10563091	Not Available	516	Open in IMG/M
3300032001\|Ga0306922_10979389	Not Available	874	Open in IMG/M
3300032001\|Ga0306922_11710094	Not Available	622	Open in IMG/M
3300032059\|Ga0318533_10999317	Not Available	613	Open in IMG/M
3300032060\|Ga0318505_10064198	Not Available	1604	Open in IMG/M
3300032064\|Ga0318510_10494644	Not Available	529	Open in IMG/M
3300032066\|Ga0318514_10402897	Not Available	726	Open in IMG/M
3300032068\|Ga0318553_10378085	Not Available	742	Open in IMG/M
3300032091\|Ga0318577_10171024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1037	Open in IMG/M
3300032094\|Ga0318540_10309527	Not Available	762	Open in IMG/M
3300032261\|Ga0306920_100140619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3594	Open in IMG/M
3300032261\|Ga0306920_100433322	All Organisms → cellular organisms → Bacteria	1954	Open in IMG/M
3300032261\|Ga0306920_103383129	Not Available	593	Open in IMG/M
3300032515\|Ga0348332_12541469	Not Available	578	Open in IMG/M
3300033289\|Ga0310914_10941487	Not Available	763	Open in IMG/M
3300033290\|Ga0318519_10073950	Not Available	1775	Open in IMG/M
3300033290\|Ga0318519_10565986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	688	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.11%
Aquatic	Environmental → Aquatic	8.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.11%
Freshwater	Environmental → Aquatic → Freshwater	8.33%
Cave	Environmental → Terrestrial → Cave	4.44%
Sediment	Environmental → Aquatic → Sediment	0.56%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.33%
Loam	Environmental → Terrestrial → Soil → Loam	4.44%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	4.44%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.56%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	63.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.44%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	4.44%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.78%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.22%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.56%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	45.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.44%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.44%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.44%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	4.44%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.78%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.22%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.67%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.11%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.11%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.56%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.56%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.56%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300026959	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26339J46600_100247114	3300003218	Bog Forest Soil	MPELFLLRTVLRALSVVLGGFGVFYLILSWSAPALWGLALVLIGAASGIEYFLDR*
Ga0062385_103167852	3300004080	Bog Forest Soil	MLELFLLRTVLRTLSVVLGGFGVFYLVMSWSAPALCGIAFVLIGAASGIDYFLDR*
Ga0062384_1000286182	3300004082	Bog Forest Soil	MSEFILLQSVLRTVSAVFGGFGVFYLIFSFSAPSLAGPALVLLGAASGITYCLDR*
Ga0062386_1000194024	3300004152	Bog Forest Soil	MLEFFLLRTLLQTLSAVLGGFGVFYLILSWSAPALGGLALVLIGAASGIAYFLDR*
Ga0062386_1013650811	3300004152	Bog Forest Soil	MPELFLLRTVLRALSVVLGGFGVFYLILSWSAPALWGLALVLIGAASGIEYFLD
Ga0066680_106342113	3300005174	Soil	RTPLMPLIFVMRSVLKAVSAVLGGFGVFYAIMSFTAPALSGLALVLIGAALGITYCLDR*
Ga0066388_1005781014	3300005332	Tropical Forest Soil	MPELFLLRTVLRTLATVLGGFGIFYLILSWSAPALSGLALVLIGAASGITYCLDR*
Ga0066388_1012796333	3300005332	Tropical Forest Soil	MTLRIPAHAGENRGPMLEFLLLRTLLRTLSVVLGGFGVFYLLLSWSAPALSGLALVLIGAASGITYFLDR*
Ga0066388_1060899011	3300005332	Tropical Forest Soil	MRTVLRTLAAVLGGFGVFYLILSWSAPALSGLALVLIGAASGITYCLDR*
Ga0066388_1068960471	3300005332	Tropical Forest Soil	MSPIFVMRSVLKAIAAVLGGFGVFYAIMSFPAPALSGLALILIGAALGITYCLDR*
Ga0066388_1072083012	3300005332	Tropical Forest Soil	MPELFLLRTVLQTLSVVLGGFGVFYLILSWSAPALWGLALVLIGAASGITYFLDR*
Ga0066903_1025994343	3300005764	Tropical Forest Soil	LRTVLRTLATVLGGFGIFYLILSWSAPALSGLALVLIGAASGITYCLDR*
Ga0066903_1063557682	3300005764	Tropical Forest Soil	ASIAREAAPMLEFLLLHTVLRTIAAVVGGFGVFYLIFSFSAPALSGVALILLGLAVGITYCLDR*
Ga0075028_1010316001	3300006050	Watersheds	VKLLILREPQPMPELFLLRTVLQTLATVLGGFGVFYLILSWSAPALSGLALVLIGAASGITYCLDR*
Ga0066659_111394691	3300006797	Soil	MPLIFVMRSVLKAVSAVLGGFGVFYAIMSFPAPALSGLALVLIGAALGIT
Ga0066710_1019814101	3300009012	Grasslands Soil	SRTPPMPLIFVMRSVLKAVSAVLGGFGVFYAIMSFPAPALSGLALVLIGAALGITYCLDR
Ga0099829_103879411	3300009038	Vadose Zone Soil	MPVIFLMRAVLKAVSAVLGGFGVFYAIMSFPAPALSGLALVLIGAALGITYCLDR*
Ga0099830_100733514	3300009088	Vadose Zone Soil	MPVIFLMRAVLKAVSAVLGGFGVFYAIMSFPSPALSGLALVLIGAALGITYCLDR*
Ga0099828_105260152	3300009089	Vadose Zone Soil	MPVIFLMRAVLKAVSAVLGGFGVFYAIMSFPAPALSGLALVLIGAALGITYYLRR*
Ga0066709_1018245471	3300009137	Grasslands Soil	MPLIFVMRSVLKAVSAVLGGFGVFYAIMSFPAPALSGLALVLIGAALGITYCLDR*
Ga0066709_1034418452	3300009137	Grasslands Soil	MPLIFVMRSVLKAVSAVLGGFGVFYAIMSFPALALSGLALVLIGAPLVITYCLDR*
Ga0126373_104910522	3300010048	Tropical Forest Soil	MLEFLLLRTLLRTLSVVLGGFGVFYLLLSWSAPALSGLALVLIGAASGITYFLDR*
Ga0126373_105115922	3300010048	Tropical Forest Soil	MPELLLLRTVLQTLAAVLGGFGVFILILSWSAPALSGLALVLIGVASGITYFLDH*
Ga0126373_122609792	3300010048	Tropical Forest Soil	MFELLLLRTVLRTLSVVLGGFGVFYLIFSWSAPALWGLALMLIGAAS
Ga0126373_124608542	3300010048	Tropical Forest Soil	MLEFFLLQTVLRTIAAVVGGFGVFYLIVSFSAPALSGVALILLGLALGITYCLDRE*
Ga0126372_102345901	3300010360	Tropical Forest Soil	MPELFLLRTLLRTLSVVLGGFGVFYLVLSWSAPTLCGLALVLIGAASGI
Ga0126372_123074821	3300010360	Tropical Forest Soil	MLELFLLRTLLRTLSVVLGGFGVFYLILSWSAPALWGLSLVLIGAASVITYFLDR*
Ga0126378_106917891	3300010361	Tropical Forest Soil	MLRTLAVAWREALPMFELLLLRTVLRTLSVVLGGFGVFYLIVSWSAPALWGLALLLIGAASGIAYFLDR*
Ga0126378_118274272	3300010361	Tropical Forest Soil	VSAPIVREAAPMLEFFLLQTVLRTIAAVVGGFGVFYLIVSFSAPALSGVALILLGLALGITYCLDRE*
Ga0126381_1000742305	3300010376	Tropical Forest Soil	MLLTLAVVWREALPMFELLLLRTVLRTLSVVLGGFGVFYLIVSWSAPALWGLALLLIGAASGIAYFLDR*
Ga0126381_1007365622	3300010376	Tropical Forest Soil	MPELFLLRCVLRTLSVVLGGFGVFYVVLSLSTPALWGLALVLIGAASGIAYCLDR*
Ga0126381_1013774511	3300010376	Tropical Forest Soil	MFELLLLRTVLRTLSVVLGGFGVFYLIFSWSAPALWGLALMLIGVASGIAYFLDR*
Ga0126381_1019441321	3300010376	Tropical Forest Soil	MPELFLLRTVLRTLATVLGGFGVFYLILSWSAPALSGLALVLIGAASGITYCLDR*
Ga0126381_1044728631	3300010376	Tropical Forest Soil	QPMPELFLLRTVLRTLATVLGGFGIFYLILSWSAPALSGLALVLIGAASGITYCLDR*
Ga0126381_1049010871	3300010376	Tropical Forest Soil	MLEFLLLHTVLRTIAAVVGGFGVFYLIFSFSAPALSGVALILLGLAVGITYCLDR*
Ga0137393_115402311	3300011271	Vadose Zone Soil	MPLIFVMRSVLKAVSAVLGGFGVFYAIMSFPAPALSGLALVLIGAALGITYCLER*
Ga0182041_115746132	3300016294	Soil	MFELLLLRTVLRTLSVVLGGFGVFYLIVAWSAPALWGLALILIGAASGIAYFLDR
Ga0182041_117406881	3300016294	Soil	VILRIPALIWREPALMPELFLLRTVLRTFSVVLGGFGVFYLILSWSTPALWGIALVLI
Ga0182032_103219831	3300016357	Soil	PAKSTAMFELLLLRTVLRTLSVVPGAFEKKYLIFAWSAPALWGLALILIGGASGITYFLD
Ga0182034_100636453	3300016371	Soil	MFELLLLRTVLRTLSVVLGGFGVFYLIVAWSAPALWGLALVLIGAASSIAYFLDR
Ga0182034_115975662	3300016371	Soil	VILRIRFLIWREPALMPELFLLRTVLRTFSVVLGGFGVFYLILSWST
Ga0182040_113319662	3300016387	Soil	MFEFLLLRTVLRTLSVVLGGFGVFYLVLSLSTPALWGLTLVLIGAASG
Ga0182037_104696602	3300016404	Soil	MLRTPVVVWREALPMFELLLLRTVLRTLSVVLGGFGVFYLIFSWSAPALWGLALVLIGAASGITYFLDR
Ga0182039_103250131	3300016422	Soil	MLRTPVVVWREALPMFELLLLRTVLRTLSVVLGWFGKIYLIFSWSAPALWGLALVVIGAASGITYFLDR
Ga0182039_109440521	3300016422	Soil	REPPHMLELFLLRTLLRTLSVVLGGFGVFYLILSWSAPALWGLSLVLIGAASGITYFLDR
Ga0182039_118165182	3300016422	Soil	ELFLLRTLLRTLSVVLGGFGVFYLILSWSAPALWGLSLVLIGAASGITYFLDR
Ga0182039_121416572	3300016422	Soil	MFELFLLRTVLRTLSVVLGGFGVFYLIVAWSAPALWGLALILIGAASGINYFLDR
Ga0187818_103344832	3300017823	Freshwater Sediment	MSEFFLLQSVLRTVSAVFGGFGVFYLIFSFSAPSLAGLALVLLGAASGIAYCLDR
Ga0187808_102882712	3300017942	Freshwater Sediment	MSEFFLLQSVLRTVSAVFGGFGVFYLIFSFSAPSLAGPALVLLGAASGIAYCLDC
Ga0187819_100754885	3300017943	Freshwater Sediment	MSEFFLLQSVLRTVSAVFGGFGVFYLIFSFSAPSLAGPALVLLGAASGIAYCLDR
Ga0187817_101983583	3300017955	Freshwater Sediment	MSEFFLLQSVLRTVSAVFGGFGVFYLILSFSAPSLAGPALVLLGAASGIAYCLDR
Ga0187776_112946121	3300017966	Tropical Peatland	PELLLMRTVLRTLAAVLGGFGVFYLILSWSAPALSGLALVLIGAASGITYCLDR
Ga0187766_103874381	3300018058	Tropical Peatland	RGPMLEFLLLRTLLRTLSVVLGGFGVFYLILSWSAPALSGLALVLIGAASGITYFLDR
Ga0187772_100353184	3300018085	Tropical Peatland	MSEFFLLQSVLRTVSAVFGGFGVFYLIFSFSAPSLAGPALVLLGAASGIAYCLNR
Ga0210403_100173832	3300020580	Soil	MPALLLLRTVLRTFSVVLGGFGVFYLILSWSTPALWGIALVLIGAASGIAYFLDR
Ga0210403_107621102	3300020580	Soil	MLELFLLRTVLRTLATVLGGFGIFYLILSWSAPALSGLALVLIGAASGITYCLDR
Ga0210399_103728861	3300020581	Soil	RKVVDLKETRPMPELFLLRTVLRTLATVLGGFGVFYLILSWSAPALSGLALILIGAASGITYCLDR
Ga0210384_105611982	3300021432	Soil	MRSVLKAVSAVLGGFGVFYAIMSFPAPALSGLALVLIGAALAITYCIDR
Ga0213878_105270372	3300021444	Bulk Soil	MPELFLLRTLLRTLSVVLGGFGVFYLVLSWSAPALWGLALVLIGAASGIAYFLDR
Ga0187846_100013387	3300021476	Biofilm	MPELFLLRTVLRTLSVVLGGFGVFYLILSWSAPALWGLALVLIGAASGIDYFLDR
Ga0187846_100396772	3300021476	Biofilm	MLRTTAVVWREALPMFELLLLRTVLRTLSVVLGGFGVFYLIVSWSAPALWGLALVLIGAASGIAYFLDR
Ga0187846_101028172	3300021476	Biofilm	MPEFFLLQTVLRTLSAVLGGFGVFYLIMSFSAPALSGVALVLLGAASGIAYCLDR
Ga0187846_101320262	3300021476	Biofilm	MPELFLLRTLLRTFSVVLGGFGVFYLILSWSAPALWGLALVLIGAASGIAYFLDR
Ga0187846_101496051	3300021476	Biofilm	MLELFLLRTLLRTLSVVLGGFGVFYLILSWSAPALWGLSLVLIGAASGITYFLDR
Ga0187846_102694751	3300021476	Biofilm	MFELLLLRTVLRTLSVVLGGFGVFYLIFSWSAPALWGLALMLIGVASGIAYFLDR
Ga0187846_102995322	3300021476	Biofilm	MPEFFLLQTVLRTIAAVIGGFGVFYLIFSFSAPALSGVALILLGLAVGITYCLDR
Ga0187846_103384481	3300021476	Biofilm	MFGIFLLISVLRTLAVVLGGFGVFYAIMCFSSPALSGLALVLLGAALGIDYCLNLWED
Ga0210402_108765332	3300021478	Soil	FSVELLILREPQPMLELFLLRTVLRTLATVLGGFGIFYLILSWSAPALSGLALVLIGAASGITYCLDR
Ga0126371_100519645	3300021560	Tropical Forest Soil	MLRTLAVAWREALPMFELLLLRTVLRTLSVVLGGFGVFYLIVSWSAPALWGLALLLIGAASGIAYFLDR
Ga0126371_101537452	3300021560	Tropical Forest Soil	MPELLLLRTVLQTLAAVLGGFGVFILILSWSAPALSGLALVLIGVASAITYFLDH
Ga0126371_105500533	3300021560	Tropical Forest Soil	MLEFFLLQTVLRTIAAVVGGFGVFYLIVSFSAPALSGVALILLGLALGITYCLDRE
Ga0242662_102522352	3300022533	Soil	MPALLLLRTVLRTFSVVLGGFGVFYLILSWSTPALWGIALVLIGAASGIAYF
Ga0242654_100720802	3300022726	Soil	VILRKVVDLKETRPMPELFLLRTVLRTLAKVLGGFGVFYLILSWSAPALSGLALILIGAASGITYCLDR
Ga0207852_10362581	3300026959	Tropical Forest Soil	MPELFLLRTVLRTVSVVLGGFGVFYLILSWSAPALSGVALVLIGAASAIAYFLDR
Ga0209446_10051312	3300027698	Bog Forest Soil	MSEFILLQSVLRTVSAVFGGFGVFYLIFSFSAPSLAGPALVLLGAASGITYCLDR
Ga0209248_100714162	3300027729	Bog Forest Soil	MLELFLLRTVLRTLSVVLGGFGVFYLVMSWSAPALCGIAFVLIGAASGIDYFLDR
Ga0209448_100037502	3300027783	Bog Forest Soil	MPELFLLRTVLRALSVVLGGFGVFYLILSWSAPALWGLALVLIGAASGIEYFLDR
Ga0209448_101446061	3300027783	Bog Forest Soil	LQSVLRTVSAVFGGFGVFYLIFSFSAPSLAGPALVLLGAASGITYCLDR
Ga0209448_101519501	3300027783	Bog Forest Soil	MPELFLLRTVLRTFSVVLGGFGVFYLILSWSTPALWGIALVLIGAASGIAYCLDR
Ga0209040_101671602	3300027824	Bog Forest Soil	MLEFFLLRTLLQTLSAVLGGFGVFYLILSWSAPALGGLALVLIGAASGIAYFLDR
Ga0209283_104742981	3300027875	Vadose Zone Soil	MPVIFLMRAVLKAVSAVLGGFGVFYAIMSFPAPALSGLALVLIGAALGITYYLRR
Ga0075377_116508941	3300030844	Soil	KLLILREPQPMLELFLLRTVLRTLATVLGGFGVFYLILSWSAPALSGLALVLIGAASGITYCLDR
Ga0170834_1123061611	3300031057	Forest Soil	MLELFLLRTVLQTLAAVLGGFGVFILILSWSAPALSGLALVLIGAASGITYFVER
Ga0170824_1023296462	3300031231	Forest Soil	MLELLLMRTVLQTLAAVLGGFGVFILILSWSAPALSGLALVLIGTASGITYFLDR
Ga0170824_1033061192	3300031231	Forest Soil	VILRKVVDLKETRPMPELFLLRTVLRTLATVLGGFGVFYLILSWSAPALSGLALVLIGAASGITYCLDR
Ga0170824_1101670284	3300031231	Forest Soil	MPELFLLRTVLQTLAAVLGGFGVFYLILSWSAPALSGLALVLIGAASGITYCLDR
Ga0170824_1214694501	3300031231	Forest Soil	MLELFLLRTVLRTLATVLGGFGVFYLILSWSAPALSGLALVLIGAASGITYCLDR
Ga0170824_1241528942	3300031231	Forest Soil	MPELFLLRTVLQTLAAVLGGFGVFYLILSWSAPALSGLALVLIGVASGITYCLDR
Ga0170820_117970221	3300031446	Forest Soil	MIELFLLRTVLRTLATVLGGFGVFYLILSWSAPALSGLALVLIGAASGITYCLDR
Ga0170819_157726872	3300031469	Forest Soil	MPELFLLRTVLRTLATVLGGFGVFYLILSWSAPALSGLALVLIGAASGITYCLDR
Ga0318516_100142435	3300031543	Soil	VILRIRFLIWREPALMPELFLLRTLLRTFSVVLGGFGVFYLILSWSAPALWGLALVLIGAASGITYFLDR
Ga0318516_100207883	3300031543	Soil	MTLRIPAHAGENRGPMLEFLLLRTLLRTLSVVLGGFGVFYLLLSWSAPALSGLALVLIGAASGITYFLDR
Ga0318516_100872342	3300031543	Soil	MLRIPLIWRELALMPALLLLRTVLRTFSVVLGGFGVFYLILSWSTPALWGIALVLIGAASGIAYFLDR
Ga0318516_101572551	3300031543	Soil	TTPVVWREALPMFELLLLRTVLRTLSVVLGGFGVFYLIVSWSAPALWGLAFVLIGAASGIAYFLDR
Ga0318534_103458612	3300031544	Soil	MLRTPAVIWREALPMFELLLLRTVLRTLSVVLGGFGVFYLIVSWSAPALWGLAFVLIGAASGIAYFLDR
Ga0318541_101601012	3300031545	Soil	MPELFLLRTLLRTFSVVLGGFGVFYLILSWSAPALWGLALVLIGAASGITYFLDR
Ga0318541_102502312	3300031545	Soil	MFELLLLRTVLRTLSVVLGGFGVFYLIVAWSAPALWGLALVLIGAASGIAYFLDR
Ga0318538_106339501	3300031546	Soil	MLWTTPVVWREALPMFELLLLRTVLRTLSVVLGGFGVFYLIVSWSAPALWGLAFVLIGAASGIAYFLDR
Ga0318538_107731692	3300031546	Soil	MFEFLLLRTVLRTLSVVLGGFGVFYLVLSWSAPALWGLALVLIGAASGIVYFLDR
Ga0318528_106507413	3300031561	Soil	PADTCSDLAKSTAMFELLLLRTVLRTLSVVLGGFGVFYLIVAWSAPALWGLALVLIGAASGIAYFLDR
Ga0318573_101084772	3300031564	Soil	VILRIPALIWREPALMPELFLLRTVLRTFSVVLGGFGVFYLILSWSTPALWGIALVLIGAASGIAYFLDR
Ga0318573_101107333	3300031564	Soil	FERCSVILRIRFLIWREPALMPELFLLRTLLRTFSVVLGGVGVFYLILSWSAPALWGLALVLIGAASGITYFLDR
Ga0318573_101381871	3300031564	Soil	MLRIPLIWRELALMPALLLLRTVLRTFSVVLGGFGVFYLILSWSTPALWGIALVLI
Ga0318515_100445254	3300031572	Soil	ALLLLRTVLRTFSVVLGGFGVFYLILSWSTPALWGIALVLIGAASGIAYFLDR
Ga0318515_101865911	3300031572	Soil	MPELFLLRTLLRTLSVVLGGFGVFYLILSWSAPALWGLALVLIGAASGITYFLDR
Ga0318515_101993812	3300031572	Soil	MFEFLLLRTVLRTLSVVLGGFGVFYLVLSWSAPALWGLALVLIGAASGIAYFLDR
Ga0318515_102801822	3300031572	Soil	MLRTPVVVWREALPMFELLLLRTVLRTFSVVLGGFGVFYLIFSWSAPALWGLALVLIGAASGIAYFLDR
Ga0310915_103358742	3300031573	Soil	VILHIPALIWREPAPMPELFLLRTLLRTLSVVLGGFGVFYLVLSWSAPTLCGLALVLIGAASGIAYFLDR
Ga0310915_103982732	3300031573	Soil	VILRIPALIWREALPMFEFLLLRTVLRTLSVVLGGFGVFYLVLSWSAPALWGLALVLIGAASGIAYFLDR
Ga0310915_111423172	3300031573	Soil	MPELFLLRTVLQTLAAVLGGFGVFILILSWSAPALSGLALVLIGVASGITY
Ga0318555_100822423	3300031640	Soil	CSVILRIRFLIWREPALMPELFLLRTLLRTFSVVLGGFGVFYLILSWSAPALWGLALVLIGAASGITYFLDR
Ga0318542_100020387	3300031668	Soil	MLEFLLLRTLLRTLSVVLGGFGVFYLLLSWSAPALSGLALVLIGAASGITYFLDR
Ga0318542_105218512	3300031668	Soil	MLRTPVVVWREALPMFELLLLRTVLRTLSMVLGGFGVFYLIFSWSAPALWGLALVLIGAASGITYFLDR
Ga0318561_100017703	3300031679	Soil	MTLRIPAHAGENRGPMLEFLLLRTLLRTLSVVLGGFGVFYLLLSWSTPALSGLALVLIGAASGITYFLDR
Ga0318574_100498232	3300031680	Soil	MLELFLLRTLLRTLSVVLGGFGIFYLILSWSAPALWGLSLVLIGAASGITYFLDR
Ga0318574_101236541	3300031680	Soil	VILRIRFLIWREPALMPELLLLRTLLRTFSVVLGGFGVFYLILSWSAPALWGLALVLIGAASGITYFLDR
Ga0318572_105853092	3300031681	Soil	IFERCSVMLRTPAVIWREALPMFELLLLRTVLRTLSVVLGGFGVFYLIVSWSAPALWGLAFVLIGAASGIAYFLDR
Ga0318560_104083251	3300031682	Soil	TCSDPAKSTAMFELLLLRTVLRTLSVVLGGFGVFYLIFAWSAPALWGLALILIGAASGIAYFLDR
Ga0310686_1092469065	3300031708	Soil	MLELFLLRTTLRAFSTVLGGFGVFYLILSWSAPTLLGIGLVLIGAASGITYCLDR
Ga0318496_103633581	3300031713	Soil	EPLPMFEFLLLRTVLRTLSVVLGGFGVFYLVLSWSAPALWGLALVLIGAASGIAYFLDR
Ga0306917_113766111	3300031719	Soil	LTVLRTLSVVLGGFGVFYLILSWSAPALSGVALVLIGAASGIAYFLDR
Ga0318501_104566382	3300031736	Soil	MFELLLLRTVLRTLSVVLGGFGVFYLIVAWSAPALWGLALILIGAASGINYFLDR
Ga0318494_104417003	3300031751	Soil	FKMTLRIPAHAGENRGPMLEFLLLRTLLRTLSVVLGGFGVFYLLLSWSAPALSGLALVLIGAASGITYFLDR
Ga0307477_100170072	3300031753	Hardwood Forest Soil	MPELFLLRIVLRTISVVFGGFGVFYLILSWSAPALCGVALVLIGAASGIAYCLDR
Ga0318537_101437872	3300031763	Soil	CSVMLRTPVVVWREALPMFELLLLRTVLRTLSMVLGGFGVFYLIFSWSAPALWGLALVLIGAASGIAYFLDR
Ga0318537_102968631	3300031763	Soil	MLRIPVLIWRKALPMFELLLLRTVLRTLSVVLGGFGVFYLIVAWSAPALWGLALILIGAASGINYFLDR
Ga0318535_103164083	3300031764	Soil	TLRIPAHAGENRGPMLEFLLLRTLLRTLSVVLGGFGVFYLLLSWSAPALSGLALVLIGAASGITYFLDR
Ga0318526_104239342	3300031769	Soil	REPLPMFEFLLLRTVLRTLSVVLGGFGVFYLVLSWSAPALWGLALVLIGAASGIVYFLDR
Ga0318526_104719961	3300031769	Soil	MLRTPAVIWREALPMFELLLLRTVLRTLSVVLGGFGVFYLIVSWSAPALWGLAFVLI
Ga0318521_100594373	3300031770	Soil	VMLRIPLIWRELALMPALLLLRTVLRTFSVVLGGFGVFYLILSWSTPALWGIALVLIGAASGIAYFLDR
Ga0318521_105518172	3300031770	Soil	ELFLLRTVLQTLAAVLGGFGVFILILSWSAPALSGLALVLIGVASGITYFLDH
Ga0318566_100777772	3300031779	Soil	MTLRIPAHAGENRGPMLEFLLLRTLLRTLSVVLGGFGVFYLLLSWSAPALSGLALVLI
Ga0318508_10479371	3300031780	Soil	MPELFLLRTLLRTFSVVLGGFGVFYLVLSWSAPTLCGLALVLIGAASGIAYFLDR
Ga0318529_100143773	3300031792	Soil	MPELLLLRTLLRTFSVVLGGFGVFYLILSWSAPALWGLALVLIGAASGITYFLDR
Ga0318529_100261714	3300031792	Soil	SVMLRIPLIWRELALMPALLLLRTVLRTFSVVLGGFGVFYLILSWSTPALWGIALVLIGAASGIAYFLDR
Ga0318523_103553201	3300031798	Soil	GENRGPMLEFLLLRTLLRTLSVVLGGFGVFYLLLSWSAPALSGLALVLIGAASGITYFLD
Ga0318512_101328042	3300031846	Soil	MPELFLLRTVLRTFSVVLGGFGVFYLILSWSTPALWGIALVLIGAASGIAYFLDR
Ga0318512_103500592	3300031846	Soil	MFELLLLRTVLRTLSVVLGGFGVFYLIFAWSAPALWGLALILIGAASGIAYFLDR
Ga0306919_100342762	3300031879	Soil	VILRIPALIWREPLPMFEFLLLRTVLRTLSVVLGGFGVFYLVLSWSAPALWGLALVLIGAASGIVYFLDR
Ga0318544_101018903	3300031880	Soil	ELFLLRTLLRTFSVVLGGFGVFYLILSWSAPALWGLALVLIGAASGITYFLDR
Ga0306925_100761406	3300031890	Soil	TPAVIWREALPMFELLLLRTVLRTLSVVLGGFGVFYLIVSWSAPALWGLAFVLIGAASGIAYFLDR
Ga0306925_103106494	3300031890	Soil	MLRTPVVVWREALPMFELLLLRTVLRTLSVVLGGFGVFYLIFSWSAPALWGLALVLIGAASGIAYFLDR
Ga0318536_101305931	3300031893	Soil	MLRIPLIWRELALMPALLLLRTVLRTFSVVLGGFGVFYLILSWSTPALWGI
Ga0318536_103849171	3300031893	Soil	QSMPELFLLRTVLRTLATVLGGFGIFYLILSWSAPALSGLALVLIGAASGITYCLDR
Ga0318522_100365353	3300031894	Soil	VILRIPALIWREALPMFEFLLLRTVLRTLSVVLGGFGVFYLVLSWSAPALWGLALVLIGAASGIVYFLDR
Ga0318522_102796812	3300031894	Soil	ILRIPALIWREPALMPELFLLRTVLRTFSVVLGGFGVFYLILSWSTPALWGIALVLIGAASGIAYFLDR
Ga0318551_101137291	3300031896	Soil	RIRFLIWREPALMPELFLLRTLLRTFSVVLGGFGVFYLILSWSAPALWGLALVLIGAASGITYFLDR
Ga0318551_103337643	3300031896	Soil	FSVELLILREPQPMPELFLLRTVLRTLATVLGGFGIFYLILSWSAPALSGLALVLIGAASGITYCLDR
Ga0318520_100869723	3300031897	Soil	MPALFLLRTVLRTFSVVLGGFGVFYLILSWSTPALWGIALVLIGAASGIAYFLDR
Ga0318520_102081792	3300031897	Soil	VILRIHALIWREPLPMFEFLLLRTVLRTLSVVLGGFGVFYLVLSWSAPALWGLALVLIGAASGIVYFLDR
Ga0306923_102402994	3300031910	Soil	MPELFLLRTVLQTLAAVLGGFGVFILILSWSAPALSGLALVLIGVASGITYFLDH
Ga0306923_103924511	3300031910	Soil	MLRTPVVVWREALPMFELLLLRTVLRTLSMVLGGFGVFYLIFSWSAPALWGLALVLIGAASGIAYFLDR
Ga0306921_102492792	3300031912	Soil	MPELFLLRTVLQTLAAVLGGFGVFILILSWSAPALSGLALVLIGVATGITYSLDH
Ga0310912_101278732	3300031941	Soil	MFELLLLRTVLRTLSVVLGGFGVFYLIVSWSAPALWGLAFVLIGAASGIAYFLDR
Ga0310912_104259012	3300031941	Soil	MFELLLLRAVLRTLSVVLGGFGVFYLIVSWSAPALWGLALILIGAASGIAYFLDR
Ga0310912_109314531	3300031941	Soil	IPALIWREPALMPELFLLRTVLRTFSVVLGGFGVFYLILSWSTPALWGIALVLIGAASGIAYFLDR
Ga0310916_108741871	3300031942	Soil	LLLLRTVLRTLSVVLGGFGVFYLIVSWSAPALWGLAFVLIGAASGIAYFLDR
Ga0310913_108307602	3300031945	Soil	SDPAKSTAMFELLLLRTVLRTLSVVLGGFGVFYLIFAWSAPALWGLALILIGAASGIAYFLDR
Ga0310910_102702272	3300031946	Soil	MLRTPVVVWREALPMFELLLLRTVLRTLSVVLGGFGVFYLIVSWSAPALWGLAFVLIGAASGIAYFLDR
Ga0310909_108263621	3300031947	Soil	PELFLLRTVLRTFSVVLGGFGVFYLILSWSTPALWGIALVLIGAASGIAYFLDR
Ga0310909_111995031	3300031947	Soil	VILRIPTLIWREPALMPELFLLRTVLRTFSVVLGGFGVFYLILSWSTPALWGIALVLIGAASGIAYFLD
Ga0306926_113214211	3300031954	Soil	MPELFLLRTVLRTLSVVLGGFGVFYLVLSLSTPALWGLTLVLIGAPSGIAYCLVR
Ga0307479_105158063	3300031962	Hardwood Forest Soil	LIFRIAALIWREPALMLELFLLRTLLRTVSTVLGGFGVFYLILSWSAPTLLGIGLVLIGAASGITYCLDR
Ga0318531_105630912	3300031981	Soil	SDLAKSTAMFELLLLRTVLRTLSVVLGGFGVFYLIVAWSAPALWGLALVLIGAASGIAYFLDR
Ga0306922_109793892	3300032001	Soil	MPELFLLRTVLRTLSVVLGGFGVFYLVLSLSTPALWGLTLVLIGAASGIAYCLDR
Ga0306922_117100941	3300032001	Soil	MPELFLLRTVLRTFSVVLGGFGVFYLLLSWSTPALWGIALVLIGAASGIAYFLDR
Ga0318533_109993172	3300032059	Soil	MLRIPVLIWREALPMFELFLLRTVLRTLSVVLGGFGVFYLIVAWSAPALWGLALILIGAASGINYFLDR
Ga0318505_100641982	3300032060	Soil	PPHMLELFLLRTLLRTLSVVLGGFGVFYLILSWSAPALWGLSLVLIGAASGITYFLDR
Ga0318510_104946441	3300032064	Soil	FERCSVILRIPLIWREPALMPELFILRTVLRTFSVVLGGFGVFYLILSWSTPALWGIALVLIGAASGIAYFLDR
Ga0318514_104028971	3300032066	Soil	MFELFLLRTLLRTLSVVLGGFGVFYLILSWSAPALWGLSLVLIGAASGITYFLDR
Ga0318553_103780852	3300032068	Soil	VILRTPVVVWREALPMFELLLLRTVLRTLSVVLGGFGVFYLIFSWSAPALWGLALVLIGAASGIAYFLDR
Ga0318577_101710241	3300032091	Soil	RTPAVIWREALPMFELLLLRTVLRTLSVVLGGFGVFYLIVSWSAPALWGLAFVLIGAASGIAYFLDR
Ga0318540_103095271	3300032094	Soil	HIPALIWREPAPMPELFLLRTLLRTLSVVLGGFGVFYLVLSWSAPTLCGLALVLIGAASGIAYFLDR
Ga0306920_1001406192	3300032261	Soil	MFELLLLRTVLRTLSVVLGGFGVFYLIVSWSAPALWGLALILIGAASGIAYFLDR
Ga0306920_1004333222	3300032261	Soil	MLWTTPVVWREALPMFELLLLRTVLRTLSVVLGGFGVFYLIVSWSAPALWGLAFVLLGAASGIAYFLDR
Ga0306920_1033831292	3300032261	Soil	MPELFLLLTVLRTLSVVLGGFGVFYLILSWSAPALSGVALVLIGAASGIAYFLDR
Ga0348332_125414692	3300032515	Plant Litter	LRTTLRAFSTVLGGFGVFYLILSWSAPTLLGIGLVLIGAASGITYCLDR
Ga0310914_109414871	3300033289	Soil	RMLELFLLRTLLRTLSVVLGGFGVFYLILSWSAPALWGLSLVLIGAASGITYFLDR
Ga0318519_100739504	3300033290	Soil	YSVILHIPALIWREPALMPALFLLRTVLRTFSVVLGGFGVFYLILSWSTPALWGIALVLIGAASGIAYFLDR
Ga0318519_105659861	3300033290	Soil	LLRTLSVVLGGFGVFYLILSWSAPALWGLSLVLIGAASGITYFLDR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F032205

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences