Metagenome / Metatranscriptome Family F031905

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F031905
Family Type	Metagenome / Metatranscriptome
Number of Sequences	181
Average Sequence Length	45 residues
Representative Sequence	DKSVKPAVEAELKRRGLQIRTTEGSFHVQDPDGFEVQMGGKEQ
Number of Associated Samples	158
Number of Associated Scaffolds	181

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.66 %
% of genes near scaffold ends (potentially truncated)	96.69 %
% of genes from short scaffolds (< 2000 bps)	87.29 %
Associated GOLD sequencing projects	147
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.398 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (9.945 % of family members)
Environment Ontology (ENVO)	Unclassified (38.122 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.724 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.49% β-sheet: 21.13% Coil/Unstructured: 63.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 181 Family Scaffolds
PF13620	CarboxypepD_reg	4.97
PF13360	PQQ_2	4.97
PF12804	NTP_transf_3	4.97
PF01436	NHL	3.31
PF07589	PEP-CTERM	2.76
PF00903	Glyoxalase	2.21
PF17170	DUF5128	2.21
PF03241	HpaB	2.21
PF01799	Fer2_2	2.21
PF02687	FtsX	2.21
PF06441	EHN	1.66
PF13570	PQQ_3	1.66
PF00069	Pkinase	1.66
PF03458	Gly_transporter	1.66
PF11578	DUF3237	1.10
PF04909	Amidohydro_2	1.10
PF12681	Glyoxalase_2	1.10
PF00753	Lactamase_B	1.10
PF08240	ADH_N	1.10
PF00483	NTP_transferase	1.10
PF07519	Tannase	1.10
PF00072	Response_reg	0.55
PF00497	SBP_bac_3	0.55
PF00196	GerE	0.55
PF13561	adh_short_C2	0.55
PF05016	ParE_toxin	0.55
PF03551	PadR	0.55
PF00034	Cytochrom_C	0.55
PF12680	SnoaL_2	0.55
PF00732	GMC_oxred_N	0.55
PF05598	DUF772	0.55
PF05977	MFS_3	0.55
PF00578	AhpC-TSA	0.55
PF00174	Oxidored_molyb	0.55
PF00027	cNMP_binding	0.55
PF00152	tRNA-synt_2	0.55
PF12796	Ank_2	0.55
PF04191	PEMT	0.55
PF05163	DinB	0.55
PF04389	Peptidase_M28	0.55
PF02537	CRCB	0.55
PF07995	GSDH	0.55
PF01011	PQQ	0.55
PF13460	NAD_binding_10	0.55
PF00158	Sigma54_activat	0.55
PF10282	Lactonase	0.55
PF02738	MoCoBD_1	0.55
PF13531	SBP_bac_11	0.55
PF00561	Abhydrolase_1	0.55

COG ID	Name	Functional Category	% Frequency in 181 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	6.63
COG2368	Aromatic ring hydroxylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.21
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	1.66
COG2860	Uncharacterized membrane protein YeiH	Function unknown [S]	1.66
COG0017	Aspartyl/asparaginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.55
COG0173	Aspartyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.55
COG0239	Fluoride ion exporter CrcB/FEX, affects chromosome condensation	Cell cycle control, cell division, chromosome partitioning [D]	0.55
COG1190	Lysyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.55
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.55
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.55
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.55
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.55
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.55
COG2269	Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)	Translation, ribosomal structure and biogenesis [J]	0.55
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.55
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.55
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.55
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.55

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.40 %
Unclassified	root	N/A	11.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.40 %
Unclassified	root	N/A	11.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.40 %
Unclassified	root	N/A	11.60 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	49.17 %
Unclassified	root	N/A	11.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.10 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.55 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.55 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.92 %
Unclassified	root	N/A	11.60 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.08 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.55 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.55 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.55 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.55 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.71 %
Unclassified	root	N/A	11.60 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	2.21 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.21 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	2.21 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.55 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.55 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → environmental samples	0.55 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.55 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.55 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.71 %
Unclassified	root	N/A	11.60 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.21 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	2.21 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	2.21 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.55 %
uncultured Gemmatimonadota bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → environmental samples → uncultured Gemmatimonadota bacterium	0.55 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.55 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.55 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.55 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.71 %
Unclassified	root	N/A	11.60 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	2.21 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	2.21 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.55 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.55 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.55 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.55 %
uncultured Gemmatimonadota bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → environmental samples → uncultured Gemmatimonadota bacterium	0.55 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.55 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.55 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.71 %
Unclassified	root	N/A	11.60 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	2.21 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	2.21 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.55 %
Nitrospira moscoviensis	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	0.55 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.55 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.55 %
uncultured Gemmatimonadota bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → environmental samples → uncultured Gemmatimonadota bacterium	0.55 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.55 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.55 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.71 %
Unclassified	root	N/A	11.60 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	2.21 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	2.21 %
Granulicella sp. L46	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L46	0.55 %
Nitrospira moscoviensis	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	0.55 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.55 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.55 %
uncultured Gemmatimonadota bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → environmental samples → uncultured Gemmatimonadota bacterium	0.55 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.55 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.55 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10169304	Not Available	520	Open in IMG/M
3300000955\|JGI1027J12803_105909997	Not Available	1595	Open in IMG/M
3300001867\|JGI12627J18819_10202392	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	802	Open in IMG/M
3300004114\|Ga0062593_100272643	All Organisms → cellular organisms → Bacteria → Acidobacteria	1418	Open in IMG/M
3300005093\|Ga0062594_100003933	All Organisms → cellular organisms → Bacteria	4317	Open in IMG/M
3300005167\|Ga0066672_10122028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1612	Open in IMG/M
3300005177\|Ga0066690_10786268	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300005183\|Ga0068993_10229709	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300005331\|Ga0070670_101854257	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300005334\|Ga0068869_100361503	All Organisms → cellular organisms → Bacteria → Acidobacteria	1185	Open in IMG/M
3300005334\|Ga0068869_100474502	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300005334\|Ga0068869_100797381	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300005334\|Ga0068869_101920896	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300005336\|Ga0070680_100259036	All Organisms → cellular organisms → Bacteria	1471	Open in IMG/M
3300005338\|Ga0068868_100300435	All Organisms → cellular organisms → Bacteria	1363	Open in IMG/M
3300005341\|Ga0070691_10554044	All Organisms → cellular organisms → Bacteria → Acidobacteria	672	Open in IMG/M
3300005343\|Ga0070687_101405208	Not Available	522	Open in IMG/M
3300005365\|Ga0070688_100015685	All Organisms → cellular organisms → Bacteria	4317	Open in IMG/M
3300005445\|Ga0070708_102106385	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300005447\|Ga0066689_10380491	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300005456\|Ga0070678_100081891	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2448	Open in IMG/M
3300005459\|Ga0068867_100198304	All Organisms → cellular organisms → Bacteria → Acidobacteria	1606	Open in IMG/M
3300005518\|Ga0070699_101735898	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300005526\|Ga0073909_10170112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	922	Open in IMG/M
3300005541\|Ga0070733_10384075	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300005542\|Ga0070732_10048255	All Organisms → cellular organisms → Bacteria	2456	Open in IMG/M
3300005543\|Ga0070672_100290385	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300005558\|Ga0066698_10989504	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300005569\|Ga0066705_10127032	Not Available	1544	Open in IMG/M
3300005577\|Ga0068857_100786403	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300005617\|Ga0068859_100743784	All Organisms → cellular organisms → Bacteria → Acidobacteria	1070	Open in IMG/M
3300005618\|Ga0068864_100987391	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300005764\|Ga0066903_105330366	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300005843\|Ga0068860_100150670	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2240	Open in IMG/M
3300005895\|Ga0075277_1081517	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300006041\|Ga0075023_100104969	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300006049\|Ga0075417_10587696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300006050\|Ga0075028_100032687	All Organisms → cellular organisms → Bacteria	2395	Open in IMG/M
3300006237\|Ga0097621_100315855	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300006755\|Ga0079222_11548070	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300006844\|Ga0075428_101354741	Not Available	747	Open in IMG/M
3300006847\|Ga0075431_102195189	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300006871\|Ga0075434_100584784	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300006880\|Ga0075429_101298458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300006903\|Ga0075426_10675487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300006903\|Ga0075426_11128251	All Organisms → cellular organisms → Bacteria → Acidobacteria	594	Open in IMG/M
3300006904\|Ga0075424_101213519	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300006914\|Ga0075436_100203508	All Organisms → cellular organisms → Bacteria → Acidobacteria	1402	Open in IMG/M
3300007076\|Ga0075435_100118757	All Organisms → cellular organisms → Bacteria → Acidobacteria	2205	Open in IMG/M
3300007255\|Ga0099791_10399041	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
3300007265\|Ga0099794_10309035	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300009089\|Ga0099828_11595177	Not Available	575	Open in IMG/M
3300009089\|Ga0099828_11953895	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	514	Open in IMG/M
3300009090\|Ga0099827_10029341	All Organisms → cellular organisms → Bacteria → Acidobacteria	3951	Open in IMG/M
3300009092\|Ga0105250_10611681	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	506	Open in IMG/M
3300009094\|Ga0111539_12609957	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L46	586	Open in IMG/M
3300009098\|Ga0105245_10895178	All Organisms → cellular organisms → Bacteria → Acidobacteria	929	Open in IMG/M
3300009137\|Ga0066709_104014939	Not Available	535	Open in IMG/M
3300009137\|Ga0066709_104272506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300009147\|Ga0114129_10741198	Not Available	1259	Open in IMG/M
3300009147\|Ga0114129_10819885	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1185	Open in IMG/M
3300009148\|Ga0105243_12043892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300009177\|Ga0105248_11761155	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300009792\|Ga0126374_10270962	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300010147\|Ga0126319_1355996	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300010154\|Ga0127503_11322501	Not Available	646	Open in IMG/M
3300010304\|Ga0134088_10416845	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	656	Open in IMG/M
3300010336\|Ga0134071_10755334	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → environmental samples → uncultured Gemmatimonadota bacterium	518	Open in IMG/M
3300010359\|Ga0126376_11085252	All Organisms → cellular organisms → Bacteria → Acidobacteria	807	Open in IMG/M
3300010366\|Ga0126379_10426120	Not Available	1382	Open in IMG/M
3300010366\|Ga0126379_12478967	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	617	Open in IMG/M
3300010399\|Ga0134127_12219205	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
3300010400\|Ga0134122_10464453	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300011119\|Ga0105246_11695041	Not Available	600	Open in IMG/M
3300011120\|Ga0150983_12548731	All Organisms → cellular organisms → Bacteria → Acidobacteria	3743	Open in IMG/M
3300011269\|Ga0137392_10434877	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300011403\|Ga0137313_1059271	All Organisms → cellular organisms → Bacteria → Acidobacteria	674	Open in IMG/M
3300011405\|Ga0137340_1025238	All Organisms → cellular organisms → Bacteria → Acidobacteria	1098	Open in IMG/M
3300011423\|Ga0137436_1054479	All Organisms → cellular organisms → Bacteria → Acidobacteria	1025	Open in IMG/M
3300012203\|Ga0137399_10126216	All Organisms → cellular organisms → Bacteria	2017	Open in IMG/M
3300012203\|Ga0137399_10519347	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	999	Open in IMG/M
3300012203\|Ga0137399_11703217	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300012205\|Ga0137362_11147470	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300012206\|Ga0137380_11428657	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300012208\|Ga0137376_11664965	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300012486\|Ga0157331_1021994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300012501\|Ga0157351_1002889	All Organisms → cellular organisms → Bacteria → Acidobacteria	1231	Open in IMG/M
3300012904\|Ga0157282_10202157	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300012922\|Ga0137394_11497823	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300012923\|Ga0137359_11083711	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300012925\|Ga0137419_11579758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300012944\|Ga0137410_11585472	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300012971\|Ga0126369_10048302	All Organisms → cellular organisms → Bacteria	3620	Open in IMG/M
3300012976\|Ga0134076_10359422	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300012985\|Ga0164308_11743560	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300013296\|Ga0157374_10833246	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300013306\|Ga0163162_10054049	All Organisms → cellular organisms → Bacteria	4038	Open in IMG/M
3300013308\|Ga0157375_11236812	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	877	Open in IMG/M
3300013308\|Ga0157375_12011446	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300014326\|Ga0157380_10869146	All Organisms → cellular organisms → Bacteria → Acidobacteria	925	Open in IMG/M
3300014745\|Ga0157377_10264985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1120	Open in IMG/M
3300014880\|Ga0180082_1040587	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300014969\|Ga0157376_10588944	All Organisms → cellular organisms → Bacteria → Acidobacteria	1106	Open in IMG/M
3300015264\|Ga0137403_11548396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300015358\|Ga0134089_10311643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300015371\|Ga0132258_10155356	All Organisms → cellular organisms → Bacteria	5494	Open in IMG/M
3300015371\|Ga0132258_10559723	All Organisms → cellular organisms → Bacteria	2866	Open in IMG/M
3300016270\|Ga0182036_10037326	All Organisms → cellular organisms → Bacteria	2952	Open in IMG/M
3300016270\|Ga0182036_10640104	All Organisms → cellular organisms → Bacteria → Acidobacteria	856	Open in IMG/M
3300016294\|Ga0182041_11183928	Not Available	696	Open in IMG/M
3300016387\|Ga0182040_11799714	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	524	Open in IMG/M
3300017792\|Ga0163161_11451908	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300017955\|Ga0187817_10225574	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300018433\|Ga0066667_12018752	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300018476\|Ga0190274_12421927	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300018476\|Ga0190274_13014234	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300019229\|Ga0180116_1018636	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300019249\|Ga0184648_1430968	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300021170\|Ga0210400_10637356	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300021171\|Ga0210405_10872413	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300021329\|Ga0210362_1446685	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	923	Open in IMG/M
3300021474\|Ga0210390_10603629	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300021479\|Ga0210410_11825184	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300021559\|Ga0210409_10001925	All Organisms → cellular organisms → Bacteria	25964	Open in IMG/M
3300021947\|Ga0213856_1287831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	668	Open in IMG/M
3300022694\|Ga0222623_10115733	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300025908\|Ga0207643_11082491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300025910\|Ga0207684_11303089	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300025925\|Ga0207650_11764991	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300025927\|Ga0207687_10039099	All Organisms → cellular organisms → Bacteria	3246	Open in IMG/M
3300025927\|Ga0207687_10601610	All Organisms → cellular organisms → Bacteria → Acidobacteria	927	Open in IMG/M
3300025935\|Ga0207709_10936664	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300025937\|Ga0207669_10197359	All Organisms → cellular organisms → Bacteria	1457	Open in IMG/M
3300025940\|Ga0207691_10306125	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300025942\|Ga0207689_10651334	All Organisms → cellular organisms → Bacteria → Acidobacteria	887	Open in IMG/M
3300025942\|Ga0207689_10806391	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300025972\|Ga0207668_11383357	Not Available	634	Open in IMG/M
3300026023\|Ga0207677_10625300	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300026089\|Ga0207648_10007403	All Organisms → cellular organisms → Bacteria	10807	Open in IMG/M
3300026089\|Ga0207648_11235829	Not Available	702	Open in IMG/M
3300026118\|Ga0207675_100647227	All Organisms → cellular organisms → Bacteria → Acidobacteria	1063	Open in IMG/M
3300026118\|Ga0207675_100701883	All Organisms → cellular organisms → Bacteria → Acidobacteria	1021	Open in IMG/M
3300026142\|Ga0207698_11836944	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	621	Open in IMG/M
3300026142\|Ga0207698_12215556	Not Available	562	Open in IMG/M
3300026324\|Ga0209470_1245615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300026325\|Ga0209152_10378430	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300026536\|Ga0209058_1318647	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300026538\|Ga0209056_10660707	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300026999\|Ga0207949_1029699	Not Available	506	Open in IMG/M
3300027655\|Ga0209388_1075645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300027674\|Ga0209118_1021292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2063	Open in IMG/M
3300027684\|Ga0209626_1154016	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300027696\|Ga0208696_1184160	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300027725\|Ga0209178_1008004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3326	Open in IMG/M
3300027876\|Ga0209974_10068303	All Organisms → cellular organisms → Bacteria → Acidobacteria	1210	Open in IMG/M
3300027880\|Ga0209481_10536630	Not Available	605	Open in IMG/M
3300027910\|Ga0209583_10171447	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300027911\|Ga0209698_11082233	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300031226\|Ga0307497_10762787	Not Available	505	Open in IMG/M
3300031546\|Ga0318538_10810912	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300031547\|Ga0310887_10637464	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300031640\|Ga0318555_10525759	Not Available	641	Open in IMG/M
3300031740\|Ga0307468_101437855	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300031846\|Ga0318512_10126638	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300031854\|Ga0310904_10047701	All Organisms → cellular organisms → Bacteria	2117	Open in IMG/M
3300031854\|Ga0310904_10682397	Not Available	709	Open in IMG/M
3300031854\|Ga0310904_10922087	All Organisms → cellular organisms → Bacteria → Acidobacteria	618	Open in IMG/M
3300031908\|Ga0310900_10191689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	1427	Open in IMG/M
3300031912\|Ga0306921_12054063	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300031944\|Ga0310884_10838380	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300032003\|Ga0310897_10023678	All Organisms → cellular organisms → Bacteria → Acidobacteria	2000	Open in IMG/M
3300032003\|Ga0310897_10073380	All Organisms → cellular organisms → Bacteria	1299	Open in IMG/M
3300032003\|Ga0310897_10155008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	966	Open in IMG/M
3300032017\|Ga0310899_10020648	All Organisms → cellular organisms → Bacteria	2124	Open in IMG/M
3300032064\|Ga0318510_10343778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300032075\|Ga0310890_11334050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300032160\|Ga0311301_11409685	Not Available	868	Open in IMG/M
3300032180\|Ga0307471_103711402	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300034113\|Ga0364937_150911	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300034665\|Ga0314787_110750	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300034673\|Ga0314798_066396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	707	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.30%
Host-Associated	Host-Associated	33.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.91%
Plants	Host-Associated → Plants	33.70%
Aquatic	Environmental → Aquatic	9.39%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.36%
Sediment	Environmental → Aquatic → Sediment	4.97%
Freshwater	Environmental → Aquatic → Freshwater	3.31%
Marine	Environmental → Aquatic → Marine	1.10%
Floodplain	Environmental → Terrestrial → Floodplain	0.55%
Roots	Host-Associated → Plants → Roots	0.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.47%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.71%
Loam	Environmental → Terrestrial → Soil → Loam	7.18%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.31%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.66%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.10%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.55%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.55%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.55%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.55%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.55%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.55%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.47%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.39%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.18%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.18%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.31%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.21%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.66%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.10%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.55%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.55%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.55%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.55%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.55%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.18%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.76%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.21%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.21%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.21%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.21%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.66%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.66%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.10%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.10%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.10%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.10%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.10%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.10%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.10%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.10%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.10%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.55%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.55%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.55%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.55%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.55%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.55%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.55%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.55%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.55%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005895	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011403	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT166_2	Environmental	Open in IMG/M
3300011405	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT400_2	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012486	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.120510	Environmental	Open in IMG/M
3300012501	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014880	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10D	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019229	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021329	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.625 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021947	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - G-2016_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026999	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034113	Sediment microbial communities from East River floodplain, Colorado, United States - 7_s17	Environmental	Open in IMG/M
3300034665	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034673	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_101693042	3300000597	Forest Soil	IAGWDTDKSVKPALKAELERRGLKIRESATGGGSFHVMDPDGFEVQMGGKDQ*
JGI1027J12803_1059099971	3300000955	Soil	ADLKGRGLQIRTTEGSFHVQDPDGFEVQMGGKNQ*
JGI12627J18819_102023921	3300001867	Forest Soil	NVRGQVEDELKRRGFKIRTTEHSFHFSDPNGFELQVGGKDQ*
Ga0062593_1002726432	3300004114	Soil	LANWDTDPKIKAAMDAELKKRGLMVRVTNNSFHVQDPDGLEVQMGGKEQ*
Ga0062594_1000039333	3300005093	Soil	KSVKPAVEAELKKRGLKIRTTEGSFHVQDPDGFEVQMGGKNQ*
Ga0066672_101220283	3300005167	Soil	IAYTIAGWDTDKSVKPAVEAELKRRGLQIRTTEGSFHVQDPEGFEVQMGGKEQ*
Ga0066690_107862681	3300005177	Soil	QNWDTDKSVKPAVEAELKRRGLKIRTTEGSFHVEDPEGFEVQMGGKEQ*
Ga0068993_102297092	3300005183	Natural And Restored Wetlands	ANWDTDKSVRGKVEAELKHRGLDIRTTEGGFHVKDPDGFEVQMGGKEQ*
Ga0070670_1018542571	3300005331	Switchgrass Rhizosphere	DHIAYTLANWDTDKSVRPAVEAELKKRGLKIRTTEGGFHVQDPDGFEVQMGGKDQ*
Ga0068869_1003615032	3300005334	Miscanthus Rhizosphere	NWDTDKTVKPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQVGGKKQ*
Ga0068869_1004745023	3300005334	Miscanthus Rhizosphere	YSLAGWDTDKSVKPAVEAELKKRGLKIRTTEGSFHVQDPDGFEVQMGGKDQ*
Ga0068869_1007973812	3300005334	Miscanthus Rhizosphere	NWDTDKTVKPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQMGGKKQ*
Ga0068869_1019208961	3300005334	Miscanthus Rhizosphere	YSLAGWDTDKSVKPAVEAELKKRGLKIRTTEGSFHVQDPDGFEVQMGGKNQ*
Ga0070680_1002590362	3300005336	Corn Rhizosphere	AGWDTDKSVKPAVEAELKKRGLNIRTTEGSFHVQDPDGFEVQMGGKDQ*
Ga0068868_1003004351	3300005338	Miscanthus Rhizosphere	TVKPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQMGGKKQ*
Ga0070691_105540441	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	IDHIAYTLAGWDTDKSVKPAVEAELKRRGLMIRTTEGSFHVADPDGFEVQMGGKNQ*
Ga0070687_1014052082	3300005343	Switchgrass Rhizosphere	DPKIKAAMDAELKRRGLMIRVTNNSFHVQDPDGLEVQMGGKEQ*
Ga0070688_1000156855	3300005365	Switchgrass Rhizosphere	AGWDTDKSVKPAVEAELKKRGLKIRTTEGSFHVQDPDGFEVQMGGKDQ*
Ga0070708_1021063851	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	AYTLANWDTDKTVRPAVEAELNRRALKIRVTEGSFHVQDPDGFEVQMGGKTQ*
Ga0066689_103804911	3300005447	Soil	NWDTDKSVKPAVEAELKRRGLKIRTTEGSFHVEDPEGFEVQMGGKEQ*
Ga0070678_1000818913	3300005456	Miscanthus Rhizosphere	AYTLANWDTDKSVKPAVEAELKKRGLNIRVTEGSFHVPDPDGFEVQMGGKKQ*
Ga0068867_1001983042	3300005459	Miscanthus Rhizosphere	HIAYTLANWDTDKSVKPAVEAELKKRGLNIRVTEGSFHVPDPDGFEVQMGGKKQ*
Ga0070699_1017358981	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LANWDTDKAVKPAVEAELKRRGLKIRTTEGSFHVQDPDGFEVQMGGKTQ*
Ga0073909_101701122	3300005526	Surface Soil	LANWDTDKSVKAAMETELKRRGLMIRVTGNSFHVQDPDGFEVQMGGKTQ*
Ga0070733_103840751	3300005541	Surface Soil	AELKRRGLKTRTTEHSFHFSDPDGFELQVGGKDQ*
Ga0070732_100482551	3300005542	Surface Soil	DKNVREEVADELKRRGLKTRTTEHSLHFSDPDGFELQVGGKDQ*
Ga0070672_1002903851	3300005543	Miscanthus Rhizosphere	EAELKRRGLNIRVTEGSFHVQDPDGFEVQMGGKKQ*
Ga0066698_109895041	3300005558	Soil	GWDTDKSVRPAVEAELKRRGLKIRTTEGSFHVQDPDGFEVQMGGKNQ*
Ga0066705_101270321	3300005569	Soil	KSVKPAVEAELKRRGLQIRSTEGSFHVSDPEGFEVQMGGKNQ*
Ga0068857_1007864032	3300005577	Corn Rhizosphere	WDTDKSVRPAVEAELKKRGLKIRTTEGGFHVQDPDGFEVQMGGKDQ*
Ga0068859_1007437842	3300005617	Switchgrass Rhizosphere	VKPAVEAELKRRGLMIRTTEGSFHVQDPDGFEVQMGGKAQ*
Ga0068864_1009873911	3300005618	Switchgrass Rhizosphere	PAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQMGGKKQ*
Ga0066903_1053303661	3300005764	Tropical Forest Soil	YTIAGWDTDKSVKPALKVELERRGLKIRESATGGSSFHVMDPDGFEVQMGGTDQ*
Ga0068860_1001506703	3300005843	Switchgrass Rhizosphere	AVEAELKKRGLNIRVTEGSFHVPDPDGFEVQMGGKKQ*
Ga0075277_10815171	3300005895	Rice Paddy Soil	TDKNVRSAVEAELKRRNLQIRSTEGSLHVQDPDGFDVQMGGKTQ*
Ga0075023_1001049692	3300006041	Watersheds	AVEAELKRRGLMIRTTEGSFHVQDPDGFEVQMGGKTQ*
Ga0075417_105876962	3300006049	Populus Rhizosphere	SVKPAVEAELKKRGLEIRTTEGSFHVKDPDGFEVQMGGKDQ*
Ga0075028_1000326874	3300006050	Watersheds	TDKNVREEVAAELNRRGLKTRTSEHSLHFSDPDGFELQVGGKDQ*
Ga0097621_1003158551	3300006237	Miscanthus Rhizosphere	DPKIKAAMDAELKNRGLMIRVTNNSFHVQDPDGLEVQMGGKEQ*
Ga0079222_115480701	3300006755	Agricultural Soil	TDKNVKPAVEAELKRRGLQVRTTEGSFHVQDPEGFEVQMGGKEQ*
Ga0075428_1013547411	3300006844	Populus Rhizosphere	KPAVEAELKRRGLTIRVTEGSFHVQDPDGFEVQMGGKKQ*
Ga0075431_1021951891	3300006847	Populus Rhizosphere	VEAELKRRGLTIRVTEGSFHVQDPDGFEVQMGGKKQ*
Ga0075434_1005847841	3300006871	Populus Rhizosphere	AVEAELKKRGLKIRTTEGSFHVQDPDGFEVQMGGKNQ*
Ga0075429_1012984581	3300006880	Populus Rhizosphere	EAELKKRGLEIRTTEGSFHVKDPDGFEVQMGGKDQ*
Ga0075426_106754871	3300006903	Populus Rhizosphere	HIAYTIANWDTDKKVKPAVEAELKRRGLQIRTTEGSFHVQDPDGFEVQMGGKEQ*
Ga0075426_111282511	3300006903	Populus Rhizosphere	KPAVEAELKRRGLQIRTTEGSFHVSDPEGFEVQMGGKDQ*
Ga0075424_1012135192	3300006904	Populus Rhizosphere	VKPAVEAELKRRGLQIRTTEGSFHVQDPEGFEVQMGGKEQ*
Ga0075436_1002035083	3300006914	Populus Rhizosphere	DHIAYTIAGWDTDKSVKPALKAELERRGLKIRESGTGGSSFHVMDPDGFEVQMGGKDQ*
Ga0075435_1001187571	3300007076	Populus Rhizosphere	VDHIAYTIQNWDTDKSVKPAVEAELKRRGLKIRTTEGSFHVEDPEGFEVQMGGKDQ*
Ga0099791_103990413	3300007255	Vadose Zone Soil	DKSVKPAVEAELKRRGLQIRTTEGSFHVQDPDGFEVQMGGKEQ*
Ga0099794_103090352	3300007265	Vadose Zone Soil	KAVKPTVEAELKRRGLKIRATEGSFHVQDPDGFEAQMGGKTQ*
Ga0099828_115951771	3300009089	Vadose Zone Soil	DKKVKEAVGAELKRRGLEVRETTGSFDVKDPEGFEVQMGGKDQ*
Ga0099828_119538951	3300009089	Vadose Zone Soil	HIAYTIAGWDADKSVKPAVEAELKRRGLQIRTTEGSFHVSDPEGFEVQMGGKNQ*
Ga0099827_100293411	3300009090	Vadose Zone Soil	VEAELKRRGLQIRVTEGSFHVPDPDGFEVQMGGKNQ*
Ga0105250_106116812	3300009092	Switchgrass Rhizosphere	DTDKSVKPAVEAELKKRGLKIRTTEGSFHVQDPDGFEVQMGGKNQ*
Ga0111539_126099571	3300009094	Populus Rhizosphere	SVKPAVEAELKKRGLQIRTTEGSFHVQDPDGFEVQMGGKNQ*
Ga0105245_108951781	3300009098	Miscanthus Rhizosphere	DKAVKPAVEAELKRRGLMIRTTEGSFHVQDPDGFEVQMGGKAQ*
Ga0066709_1040149391	3300009137	Grasslands Soil	IGYTIAGWDTDKSVKPALKTELERRGLQIRETATGGTSFHVMDPDGFEVQMGGKDQ*
Ga0066709_1042725061	3300009137	Grasslands Soil	WDTDKTVKPAVEAELKRRGLKIRATEGSFHVQDPDGFEVQMGGKTQ*
Ga0114129_107411981	3300009147	Populus Rhizosphere	LERRGLKVRESATGGSSFHVTDPDGFEVQMGGKDQ*
Ga0114129_108198853	3300009147	Populus Rhizosphere	LRSVKPAVEAELKKRGLKIRTTEGSFHVQDPDGFEVQMGGKNQ*
Ga0105243_120438921	3300009148	Miscanthus Rhizosphere	NWDTDKSIKPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQMGGKKQ*
Ga0105248_117611551	3300009177	Switchgrass Rhizosphere	KPAVEAELKRRGLTVRTTEGSFHVQDPDGFEVQMGGKTQ*
Ga0126374_102709622	3300009792	Tropical Forest Soil	AYTIVGWDTDKNVKPAVEAELKRRGLQVRIIEGSFHVQDPEGFEV*
Ga0126319_13559962	3300010147	Soil	ANWDTDKTVKPAVEAELKRRGLMIRATEGSFHVPDPDGFEVQMGGKTQ*
Ga0127503_113225011	3300010154	Soil	HIAYTLANWDTDKTVRPAVEAELKRRGLNIRATEGGFHVPDPDGFDVQMGGKTQ*
Ga0134088_104168451	3300010304	Grasslands Soil	VDHIAYTIAGWDTDKSVKPAVEAELKRRGLQIRTTEGSFHVQDPEGFEVQMGGKEQ*
Ga0134071_107553342	3300010336	Grasslands Soil	WDTDKSVKPAVEAELKRRGLKIRTTEGSFHVEDPEGFEVQMGGKEQ*
Ga0126376_110852521	3300010359	Tropical Forest Soil	KAVKPAVEADLKRRGLQVRTTEGSFHVQDPEGFEVQMGGKEQ*
Ga0126379_104261201	3300010366	Tropical Forest Soil	NVKPAVEAELKRRGLQVRTTEGSFHVQDPEGFEVQMGGKEQ*
Ga0126379_124789671	3300010366	Tropical Forest Soil	KPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQMGGSKQ*
Ga0134127_122192052	3300010399	Terrestrial Soil	YSLANWDTDKTVKPAVEAELKRRGLMIRATEGSFHVQDPDGFEVQMGGKTQ*
Ga0134122_104644532	3300010400	Terrestrial Soil	VDHVAYTLANWDTDKTVKPAVEAELKRRGLNIRTTEGSFHVQDPDGFEVQMGGKTQ*
Ga0105246_116950412	3300011119	Miscanthus Rhizosphere	WDTDKSVKPAVEAELKKRGLKIRTTEGSFDVQDPDGFEVQMGGKNQ*
Ga0150983_125487315	3300011120	Forest Soil	SVRDALKAELKRRGLEARETPGSINVNDPDGFPVQMGGKSTL*
Ga0137392_104348771	3300011269	Vadose Zone Soil	VVDHVCVTIANWDTDKNVREEVEAELKRRGLKTRTTEHSFHFSDPDGFELQVGGKDQ*
Ga0137313_10592712	3300011403	Soil	AYSLANWDTDKTVKPAVEAELKRRGLMIRATEGSFHVPDPDGFEVQMGGKTQ*
Ga0137340_10252381	3300011405	Soil	NWDTDKTVKPAVEAELKRRGLMIRATEGSFHVPDPDGFEVQMGGKTQ*
Ga0137436_10544792	3300011423	Soil	VKPAVEAELKRRGLMIRATEGSFHVPDPDGFEVQMGGKTQ*
Ga0137399_101262161	3300012203	Vadose Zone Soil	WDTDKSVKPAVEAELKRRGLQIRTTEGSFHVQDPDGFEVQMGGKEQ*
Ga0137399_105193471	3300012203	Vadose Zone Soil	HIAYTIANWDTDKKVRDAVGAELKRRGLEVRDTPGSFHIKDPDGFDVQMGGKDQ*
Ga0137399_117032171	3300012203	Vadose Zone Soil	DAVGAELKRRGLDVRETPGSFHIKDPDGFEVQMGGKDQ*
Ga0137362_111474702	3300012205	Vadose Zone Soil	AGWDVDKSVKPALKAELERRGLQIRETATGGSSFHVMDPDGFEVQMGGKDQ*
Ga0137380_114286571	3300012206	Vadose Zone Soil	AELKRRGLNIRVTEGSFHVPDPDGFEVQMGGKTQ*
Ga0137376_116649651	3300012208	Vadose Zone Soil	NVKESVRAELKRRGLEVRETPCSFHIKDPDGFEVQMGGKDQ*
Ga0157331_10219942	3300012486	Soil	AVEAELKKRGLKIRTTEGSFHVQDPDGFEVQMGGKEQ*
Ga0157351_10028891	3300012501	Unplanted Soil	TVKPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQVGGKKQ*
Ga0157282_102021571	3300012904	Soil	LANWDTDKTVKPAVEAELKRRGLNIRVTEGSFHVPDPDGFEVQMGGKKQ*
Ga0137394_114978231	3300012922	Vadose Zone Soil	IAYTIQNWDTDKSVKPAVEAELKRRGLKIRTTEGSFHVEDPEGFEVQMGGKEQ*
Ga0137359_110837111	3300012923	Vadose Zone Soil	AELKRRGLQIRTTEGSFHVQDPDGFEVQMGGKEQ*
Ga0137419_115797582	3300012925	Vadose Zone Soil	AVGAELKRRGLEVRETPGSFHVKDPDGFEVQMGGKDQ*
Ga0137410_115854721	3300012944	Vadose Zone Soil	KPAVEAELKRRGLMIRATEGSFHVPDPDGFEVQMGGKTQ*
Ga0126369_100483024	3300012971	Tropical Forest Soil	KPAVEAELKRRGLQVRTTEGSFHVQDPEGFEVQMGGKEQ*
Ga0134076_103594222	3300012976	Grasslands Soil	EAELKRRGLKIRATEGSFHVQDPDGFEVQMGGKTQ*
Ga0164308_117435601	3300012985	Soil	WDTDPKIKAAMDAELKKRGLMVRVTNNSFHVQDPDGLEVQMGGKEQ*
Ga0157374_108332463	3300013296	Miscanthus Rhizosphere	WDTDKSVKPAVEAELKKRGLKIRTTEGSFHVQDPDGFEVQMGGKDQ*
Ga0163162_100540495	3300013306	Switchgrass Rhizosphere	VKPAVEAELKKRGLNIRVTEGSFHVPDPDGFEVQMGGKKQ*
Ga0157375_112368121	3300013308	Miscanthus Rhizosphere	TLANWDTDKTVKPAVEAELKRRGLMIRTTEGSFHVQDPDGFEVQMGGKTQ*
Ga0157375_120114461	3300013308	Miscanthus Rhizosphere	KTVKPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQMGGKKQ*
Ga0157380_108691461	3300014326	Switchgrass Rhizosphere	TDKSVRPAMEAELKRRGLKMTSNDNGFHVTDPDGIGVQMGGKKQ*
Ga0157377_102649851	3300014745	Miscanthus Rhizosphere	SLAGWDTDKSVKPAVEAELKKRGLKIRTTEGSFHVQDPDGFEVQMGGKNQ*
Ga0180082_10405872	3300014880	Soil	AVEAELKRRGLMIRATEGSFHVPDPDGFEVQMGGKTQ*
Ga0157376_105889442	3300014969	Miscanthus Rhizosphere	DKAVKPAVEAELKRRGLTIRTTEGSFHVQDLDGFEVQMGGKAQ*
Ga0137403_115483962	3300015264	Vadose Zone Soil	EKVEAELKRRGLEVRTTAGSFHFKDPDGFELQVGGKDQ*
Ga0134089_103116432	3300015358	Grasslands Soil	TDKSVKPAVEAELKRRGLQIRTTEGSFHVQDPEGFEVQMGGKEQ*
Ga0132258_101553561	3300015371	Arabidopsis Rhizosphere	TDKSVKPAVEAELKKRGLKIRTTEGSFHVQDPDGFEVQMGGSNQ*
Ga0132258_105597231	3300015371	Arabidopsis Rhizosphere	AVEAELKRRGLSIRVTEGSFHVQDPDGFEVQMGGKRQ*
Ga0182036_100373264	3300016270	Soil	MGYGKSVKPALKAELERRGLKIRESATGGGSFHVMDPDGFEVQMGGKDQ
Ga0182036_106401041	3300016270	Soil	SVKPALKTELERRGLQIRESATGGSSLHVMDPDGFEVQMGGKDQ
Ga0182041_111839282	3300016294	Soil	DTDKSVKPALKAELELRGLKIRESTTGGGSFHVMDPDGFEVQMGGKDQ
Ga0182040_117997141	3300016387	Soil	VREEVGAELKRRGLAVRENARSLFVRDPDGFEVQMGGKDQ
Ga0163161_114519082	3300017792	Switchgrass Rhizosphere	AYTLANWDTDKSIKAAMEAELKRRKLMIRATGESFHVQDPDGFEVQMGGKTQ
Ga0187817_102255743	3300017955	Freshwater Sediment	WDTDKNVREKVEAELKRRGLKTRTSEHSFHFSDPDGFELQVGGKDQ
Ga0066667_120187521	3300018433	Grasslands Soil	AVEAESKRRKFQVRTTEGRLHVQDPEGFEVQMGGKEQ
Ga0190274_124219272	3300018476	Soil	ANWDTDKTVKPAVEAELKRRGLMIRTTEGSFHVQDPDGFEVQMGGKTQ
Ga0190274_130142342	3300018476	Soil	VKPAVEAELKRRGLMIRTTEGSFHVQDPDGFEVQMGGKQQ
Ga0180116_10186362	3300019229	Groundwater Sediment	VDYVAYSLANWDTDKTVKPAVEVELKCRGLMIRATEGSFYVPDLDGFEVQMGGKTQ
Ga0184648_14309681	3300019249	Groundwater Sediment	LENWDTDNKSVRPAMEAELKRRGLKMTSNEGGFHVTDPDGVGVQMGGKKQ
Ga0210400_106373562	3300021170	Soil	DKNLREEVEAELKRRGLKTRTTEHSFHFSDPDGFEVQVGGKDQ
Ga0210405_108724131	3300021171	Soil	WDTDKNVRGEVEEELKRRGFKTRTTANSFHFSDPDGFEVQVGGKDQ
Ga0210362_14466851	3300021329	Estuarine	HVAYTLANWDTDKTVRSSMEAELKRRKLEIRSTEGGFHVKDPDGFEVQMGGKKH
Ga0210390_106036292	3300021474	Soil	TIANWDTDKSVREKVEAELKRRGLKTRTSENSFHFSDPDGFELQVGGKNQ
Ga0210410_118251841	3300021479	Soil	RDAVGAELKRRGLEVRDTPGSFHIKDPDGFDVQMGGKDQ
Ga0210409_1000192526	3300021559	Soil	CLTIANWDTDKNVKGEVEEELKRRGFKTRTTEHSFHFSDPDGFEVQVGGKDQ
Ga0213856_12878311	3300021947	Watersheds	SVRPAMEAELKRRGLKMTSNEGGFHVTDPDGVGVQMGGKKQ
Ga0222623_101157332	3300022694	Groundwater Sediment	LANWDSDKTVKPAVEAELKRRGLNIRTTEGSFHVQDPDGFEVQMGGKTQ
Ga0207643_110824911	3300025908	Miscanthus Rhizosphere	TLANWDTDPKIKAAMDAELKKRGLMVRVTNNSFHVQDPDGLEVQMGGKEQ
Ga0207684_113030891	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	KTVRPAVEAELNRRGLKIRVTEGSFHVQDPDGFEVQMGGKTQ
Ga0207650_117649912	3300025925	Switchgrass Rhizosphere	VRPAVEAELKKRGLKIRTTEGGFHVQDPDGFEVQMGGKDQ
Ga0207687_100390993	3300025927	Miscanthus Rhizosphere	VEAELKRRGLTIRTTEGSFHVQDPDGFEVQMGGKAQ
Ga0207687_106016101	3300025927	Miscanthus Rhizosphere	DKAVKPAVEAELKRRGLMIRTTEGSFHVQDPDGFEVQMGGKAQ
Ga0207709_109366641	3300025935	Miscanthus Rhizosphere	TDKSVRPAVEAELKKRGLKIRTTEGGFHVQDPDGFEVQMGGKDQ
Ga0207669_101973593	3300025937	Miscanthus Rhizosphere	WDTDKAVKPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQVGGKKQ
Ga0207691_103061251	3300025940	Miscanthus Rhizosphere	EAELKRRGLNIRVTEGSFHVQDPDGFEVQMGGKKQ
Ga0207689_106513341	3300025942	Miscanthus Rhizosphere	TVKPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQVGGKKQ
Ga0207689_108063911	3300025942	Miscanthus Rhizosphere	TVKPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQMGGKKQ
Ga0207668_113833571	3300025972	Switchgrass Rhizosphere	WDTDKSVKPAVEAELKKRGLKIRTTEGSFHVQDPDGFEVQMGGKNQ
Ga0207677_106253002	3300026023	Miscanthus Rhizosphere	TLANWDTDKTVKPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQMGGKKQ
Ga0207648_1000740310	3300026089	Miscanthus Rhizosphere	AYTLANWDTDKSVKPAVEAELKKRGLNIRVTEGSFHVPDPDGFEVQMGGKKQ
Ga0207648_112358292	3300026089	Miscanthus Rhizosphere	DADPKIKAAMDAELKRRGLMIRVTNNSFHVQDPDGLEVQMGGKEQ
Ga0207675_1006472272	3300026118	Switchgrass Rhizosphere	YTLANWDTDKSVKPAVEAELKRRGLQIRTTEDSFHVQDPDGFEVQMGGKKQ
Ga0207675_1007018832	3300026118	Switchgrass Rhizosphere	DHIAYTLANWDTDKAVRPAVEAELKRRGLMIRTTEGSFHVQDPDGFEVQMGGKTQ
Ga0207698_118369441	3300026142	Corn Rhizosphere	VKPAVEAELKKRGLKIRTTEGSFHVQDPDGFEVQMGGKNQ
Ga0207698_122155562	3300026142	Corn Rhizosphere	MRFESANFDKSVKPAVEAELKRRGLMIRTTEGSFHVQDPDGFEVQMGGKTQ
Ga0209470_12456152	3300026324	Soil	LANWDTDKTVKPAVEAELKRRGLKIRATEGSFHVQDPDGFEVQMGGKTQ
Ga0209152_103784301	3300026325	Soil	AVGAELKRRGLEVRETPGSFHIKDPDGFEVQMGGKDQ
Ga0209058_13186471	3300026536	Soil	GWDTDKSVRPAVEAELKRRGLKIRTTEGSFHVQDPDGFEVQMGGKNQ
Ga0209056_106607071	3300026538	Soil	VKPAVEAELKRRGLKIRTTEGSFHVEDPDGFEVQMGGKTQ
Ga0207949_10296992	3300026999	Forest Soil	EAELKRRGLKTRTTEHSFHFGDPDGFEVQVGGKDQ
Ga0209388_10756452	3300027655	Vadose Zone Soil	DKKVRDAVGAELKRRGLEVRETPGSFHIKDPDGFEVQMGGKDQ
Ga0209118_10212921	3300027674	Forest Soil	AVGAELKRRGLEVRDTPGSFHIKDPDGFDVQMGGKDQ
Ga0209626_11540161	3300027684	Forest Soil	NWDTDKNVKDEVEAELKRRGLKTRTSEHSFHFSDPDGFELQVGGKDQ
Ga0208696_11841601	3300027696	Peatlands Soil	CLTIANWDTDKSVKEKVEAELKRRGLKTRTSEHSFHFSDPDGFELQVGGKDQ
Ga0209178_10080041	3300027725	Agricultural Soil	KDPSVKERVAAELKRRGIETRSTAGSYHFKDPDGFELQVGGKDQ
Ga0209974_100683031	3300027876	Arabidopsis Thaliana Rhizosphere	IAYTLANWDTDKTVKPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQVGGKKQ
Ga0209481_105366302	3300027880	Populus Rhizosphere	PAVEAELKRRGLTIRVTEGSFHVQDPDGFEVQMGGKKQ
Ga0209583_101714471	3300027910	Watersheds	AVEAELKRRGLMIRTTEGSFHVQDPDGFEVQMGGKTQ
Ga0209698_110822331	3300027911	Watersheds	WDTDKKVRDAVGAELKRRGLEIRETTGSFHIKDPDGFEVQMGGKDQ
Ga0307497_107627872	3300031226	Soil	EAELKRRGLMIRTTEGSFHVPDPDGFEVQMGGKTQ
Ga0318538_108109122	3300031546	Soil	KGVRPAVEAELKRRGLQVRSTTDSLHIQDPDGFDVQMGGKRQ
Ga0310887_106374641	3300031547	Soil	YTLANWDTDKTVKPAVEAELKRRGLNIRATEGSFHVQDPDGFEVQMGGKKQ
Ga0318555_105257592	3300031640	Soil	AYTIAGWDADKSVKPALRSALERQGLQIRESATGGSSFHVMDPDGFEVQMGGKDQ
Ga0307468_1014378552	3300031740	Hardwood Forest Soil	VEAELKRRGLNIRVTEGSFHVQDPDGFEVQMGGKKQCYRGRTR
Ga0318512_101266381	3300031846	Soil	VDHIAYTIAGWDADKSVKPALRSALERQGLQIRESATGGSSFHVMDPDGFEVQMGGKDQ
Ga0310904_100477011	3300031854	Soil	KPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQMGGKKQ
Ga0310904_106823972	3300031854	Soil	VEAELKRRKLNIRVTEGSFHVQDPDGFEVQMGGKKQ
Ga0310904_109220872	3300031854	Soil	IAYTLENWDTDNKSVRPAMEAELKRRGLKMTSNEGGFHVTDPDGIGVQMGGKKQ
Ga0310900_101916894	3300031908	Soil	DTDKTVRPAMEAELKRRGLKMTSNDNGFHVTDPDGIGVQMGGKKQ
Ga0306921_120540633	3300031912	Soil	VGAELKRRGLAVRENARSLFVRDPDGFEVQMGGKDQ
Ga0310884_108383801	3300031944	Soil	YTLANWDTDASVKSAVEAELKRRKLNIRVTEGSFHVQDPDGFEVQMGGKKQ
Ga0310897_100236781	3300032003	Soil	VKPAVEAELKKRGLNIRVTEGSFHVPDPDGFEVQMGGKKQ
Ga0310897_100733801	3300032003	Soil	DKSVKPAVEAELKKRGLKIRTTEGSFHVQDPDGFEVQMGGKKQ
Ga0310897_101550083	3300032003	Soil	SVRPAMEAELKRRGLKMTSNEGGFHVTDPDGIGVQMGGKKQ
Ga0310899_100206483	3300032017	Soil	KTVKPAVEAELKRRGLNIRVTEGSFHVQDPDGFEVQIGGKKQ
Ga0318510_103437781	3300032064	Soil	EAELKRRGLQVRSTTDSLHIQDPDGFDVQMGGKRQ
Ga0310890_113340501	3300032075	Soil	EAELKRRGLQIRTTEGSFHVQDPDGFEVQMGGKTQ
Ga0311301_114096852	3300032160	Peatlands Soil	DTDKSVKDKVEAELKRRGLKTRTSEHSFHFSDPDGFELQVGGKDQ
Ga0307471_1037114021	3300032180	Hardwood Forest Soil	LAGWDTDKSVKPAVEAELKRRGLMIRTTEGSFHVQDPDGFEVQMGGKQQ
Ga0364937_150911_341_502	3300034113	Sediment	VVAVSFHWDTDKTVKPAVEAELKRRGLMIRATEGSFHVPDPDGFEVQMGGKTQ
Ga0314787_110750_3_164	3300034665	Soil	IAYTLANWDTDASVKSAVEAELKRRKLNIRVTEGSFHVQDPDGFEVQMGGKKQ
Ga0314798_066396_32_142	3300034673	Soil	MEAELKRRGLKMTSNDNGFHVTDPDGIGVQMGGKKQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F031905

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences