Metagenome / Metatranscriptome Family F031267

Basic Information
Family ID	F031267
Family Type	Metagenome / Metatranscriptome
Number of Sequences	183
Average Sequence Length	47 residues
Representative Sequence	MSAVVDFPVKPEARPYLDAFGRDDREPDWLAGHRRRSLARFAELGFPSR
Number of Associated Samples	149
Number of Associated Scaffolds	183

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	75.41 %
% of genes near scaffold ends (potentially truncated)	99.45 %
% of genes from short scaffolds (< 2000 bps)	91.80 %
Associated GOLD sequencing projects	135
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Most Common Taxonomy
Group	Unclassified (53.005 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.055 % of family members)
Environment Ontology (ENVO)	Unclassified (36.612 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.098 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.36% β-sheet: 0.00% Coil/Unstructured: 63.64%
Feature Viewer

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Pfam ID	Name	% Frequency in 183 Family Scaffolds
PF00005	ABC_tran	40.98
PF01458	SUFBD	10.93
PF02082	Rrf2	1.09
PF00072	Response_reg	0.55
PF01261	AP_endonuc_2	0.55
PF00144	Beta-lactamase	0.55
PF02575	YbaB_DNA_bd	0.55
PF02518	HATPase_c	0.55

COG ID	Name	Functional Category	% Frequency in 183 Family Scaffolds
COG0719	Fe-S cluster assembly scaffold protein SufB	Posttranslational modification, protein turnover, chaperones [O]	10.93
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	1.09
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	1.09
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	1.09
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	1.09
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	1.09
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	1.09
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	1.09
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	1.09
COG0718	DNA-binding nucleoid-associated protein YbaB/EfbC	Transcription [K]	0.55
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.55
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.55
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.55

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.01 %
All Organisms	root	All Organisms	46.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.01 %
cellular organisms	root	All Organisms → cellular organisms	46.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.01 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.01 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.33 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.01 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	30.05 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.01 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	28.42 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.01 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	24.04 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.01 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	17.49 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	6.56 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.01 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	17.49 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	6.56 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.01 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	17.49 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	6.56 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.01 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	17.49 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	6.56 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.55 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101202708	Not Available	647	Open in IMG/M
3300002568\|C688J35102_118555480	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300003219\|JGI26341J46601_10070826	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300004091\|Ga0062387_100892715	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300004152\|Ga0062386_100719394	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300004631\|Ga0058899_10020572	Not Available	855	Open in IMG/M
3300004631\|Ga0058899_11941058	All Organisms → cellular organisms → Bacteria → Proteobacteria	708	Open in IMG/M
3300005179\|Ga0066684_11116481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	504	Open in IMG/M
3300005184\|Ga0066671_10950231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	542	Open in IMG/M
3300005332\|Ga0066388_103444490	Not Available	808	Open in IMG/M
3300005332\|Ga0066388_105452423	All Organisms → cellular organisms → Bacteria → Proteobacteria	645	Open in IMG/M
3300005363\|Ga0008090_15269838	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300005363\|Ga0008090_15684923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1383	Open in IMG/M
3300005435\|Ga0070714_101859705	Not Available	588	Open in IMG/M
3300005437\|Ga0070710_10137584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1495	Open in IMG/M
3300005560\|Ga0066670_10905910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	536	Open in IMG/M
3300005560\|Ga0066670_11017186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	507	Open in IMG/M
3300005561\|Ga0066699_11104468	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300005764\|Ga0066903_105800887	Not Available	648	Open in IMG/M
3300006046\|Ga0066652_100391442	All Organisms → cellular organisms → Bacteria → Proteobacteria	1263	Open in IMG/M
3300006163\|Ga0070715_10895168	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300006172\|Ga0075018_10419146	Not Available	684	Open in IMG/M
3300006176\|Ga0070765_100602590	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300006606\|Ga0074062_12384214	Not Available	605	Open in IMG/M
3300006796\|Ga0066665_11277016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	562	Open in IMG/M
3300006804\|Ga0079221_10761637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	686	Open in IMG/M
3300007788\|Ga0099795_10063161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1379	Open in IMG/M
3300009012\|Ga0066710_101997814	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300009792\|Ga0126374_10414989	Not Available	945	Open in IMG/M
3300009792\|Ga0126374_10848030	Not Available	703	Open in IMG/M
3300010154\|Ga0127503_10953055	Not Available	597	Open in IMG/M
3300010320\|Ga0134109_10066405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1216	Open in IMG/M
3300010360\|Ga0126372_11077675	Not Available	820	Open in IMG/M
3300010366\|Ga0126379_11688164	Not Available	738	Open in IMG/M
3300010366\|Ga0126379_11732935	Not Available	729	Open in IMG/M
3300010366\|Ga0126379_12822949	Not Available	581	Open in IMG/M
3300010398\|Ga0126383_12423692	Not Available	610	Open in IMG/M
3300011120\|Ga0150983_16116546	Not Available	650	Open in IMG/M
3300011270\|Ga0137391_10577769	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300012212\|Ga0150985_104140022	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300012212\|Ga0150985_118071026	Not Available	880	Open in IMG/M
3300012363\|Ga0137390_10460047	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300012376\|Ga0134032_1122375	Not Available	914	Open in IMG/M
3300012395\|Ga0134044_1056397	Not Available	646	Open in IMG/M
3300012685\|Ga0137397_10419970	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300012918\|Ga0137396_11136703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	555	Open in IMG/M
3300012923\|Ga0137359_11565741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	547	Open in IMG/M
3300012984\|Ga0164309_10683178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	812	Open in IMG/M
3300015241\|Ga0137418_10479585	Not Available	999	Open in IMG/M
3300016270\|Ga0182036_10245494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1337	Open in IMG/M
3300016270\|Ga0182036_10641059	Not Available	855	Open in IMG/M
3300016270\|Ga0182036_11310274	Not Available	604	Open in IMG/M
3300016294\|Ga0182041_11759781	Not Available	574	Open in IMG/M
3300016319\|Ga0182033_11490392	Not Available	610	Open in IMG/M
3300016341\|Ga0182035_10104348	Not Available	2085	Open in IMG/M
3300016357\|Ga0182032_10356799	All Organisms → cellular organisms → Bacteria → Proteobacteria	1171	Open in IMG/M
3300016357\|Ga0182032_11639998	Not Available	560	Open in IMG/M
3300016387\|Ga0182040_10601077	Not Available	891	Open in IMG/M
3300016387\|Ga0182040_11435335	Not Available	585	Open in IMG/M
3300016387\|Ga0182040_11832499	Not Available	520	Open in IMG/M
3300016404\|Ga0182037_10837098	Not Available	795	Open in IMG/M
3300016404\|Ga0182037_12132546	Not Available	504	Open in IMG/M
3300016422\|Ga0182039_10424621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1134	Open in IMG/M
3300016445\|Ga0182038_11061166	Not Available	719	Open in IMG/M
3300017654\|Ga0134069_1337513	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300017822\|Ga0187802_10231292	Not Available	713	Open in IMG/M
3300019192\|Ga0184603_145459	Not Available	780	Open in IMG/M
3300020581\|Ga0210399_10940304	Not Available	699	Open in IMG/M
3300020582\|Ga0210395_10898870	Not Available	658	Open in IMG/M
3300020583\|Ga0210401_10780430	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300021171\|Ga0210405_10053367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3197	Open in IMG/M
3300021362\|Ga0213882_10283112	Not Available	690	Open in IMG/M
3300021401\|Ga0210393_11675450	Not Available	503	Open in IMG/M
3300021403\|Ga0210397_10162053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1572	Open in IMG/M
3300021407\|Ga0210383_10447773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1115	Open in IMG/M
3300021475\|Ga0210392_10297770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1155	Open in IMG/M
3300021560\|Ga0126371_11129318	Not Available	922	Open in IMG/M
3300021560\|Ga0126371_12608445	Not Available	612	Open in IMG/M
3300021560\|Ga0126371_13016601	Not Available	570	Open in IMG/M
3300022501\|Ga0242645_1017468	Not Available	615	Open in IMG/M
3300022527\|Ga0242664_1139801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	527	Open in IMG/M
3300022530\|Ga0242658_1190010	Not Available	553	Open in IMG/M
3300022721\|Ga0242666_1033918	Not Available	1021	Open in IMG/M
3300022756\|Ga0222622_11402419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	514	Open in IMG/M
3300023672\|Ga0247553_101023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1138	Open in IMG/M
3300024225\|Ga0224572_1053288	Not Available	753	Open in IMG/M
3300025905\|Ga0207685_10433988	Not Available	680	Open in IMG/M
3300025906\|Ga0207699_10984616	Not Available	623	Open in IMG/M
3300025929\|Ga0207664_10193806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1750	Open in IMG/M
3300025929\|Ga0207664_10281082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1460	Open in IMG/M
3300025939\|Ga0207665_10586208	Not Available	869	Open in IMG/M
3300026301\|Ga0209238_1079656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1140	Open in IMG/M
3300026308\|Ga0209265_1191280	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300026527\|Ga0209059_1083207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1352	Open in IMG/M
3300026542\|Ga0209805_1327572	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300026550\|Ga0209474_10302507	Not Available	941	Open in IMG/M
3300026551\|Ga0209648_10448883	Not Available	802	Open in IMG/M
3300027703\|Ga0207862_1146778	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300027729\|Ga0209248_10231922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	540	Open in IMG/M
3300027737\|Ga0209038_10151761	Not Available	702	Open in IMG/M
3300027767\|Ga0209655_10059918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1268	Open in IMG/M
3300027783\|Ga0209448_10129661	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300027889\|Ga0209380_10113884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1570	Open in IMG/M
3300027889\|Ga0209380_10304718	Not Available	936	Open in IMG/M
3300027903\|Ga0209488_10671978	Not Available	745	Open in IMG/M
3300029636\|Ga0222749_10558927	Not Available	623	Open in IMG/M
3300030730\|Ga0307482_1306096	Not Available	513	Open in IMG/M
3300030839\|Ga0073999_11073602	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300030902\|Ga0308202_1019345	Not Available	1052	Open in IMG/M
3300030913\|Ga0265759_104173	Not Available	696	Open in IMG/M
3300030937\|Ga0138302_1069315	Not Available	509	Open in IMG/M
3300030997\|Ga0073997_11931208	Not Available	642	Open in IMG/M
3300031057\|Ga0170834_103259266	Not Available	513	Open in IMG/M
3300031092\|Ga0308204_10356819	Not Available	504	Open in IMG/M
3300031128\|Ga0170823_14584112	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300031231\|Ga0170824_107022785	Not Available	704	Open in IMG/M
3300031231\|Ga0170824_107861727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1319	Open in IMG/M
3300031236\|Ga0302324_102491938	Not Available	632	Open in IMG/M
3300031446\|Ga0170820_10081920	Not Available	508	Open in IMG/M
3300031446\|Ga0170820_12952024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	567	Open in IMG/M
3300031474\|Ga0170818_107328824	Not Available	850	Open in IMG/M
3300031474\|Ga0170818_108454767	Not Available	509	Open in IMG/M
3300031544\|Ga0318534_10028351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3037	Open in IMG/M
3300031545\|Ga0318541_10032635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2591	Open in IMG/M
3300031549\|Ga0318571_10007509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2432	Open in IMG/M
3300031561\|Ga0318528_10656909	Not Available	562	Open in IMG/M
3300031590\|Ga0307483_1009099	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300031640\|Ga0318555_10321012	Not Available	838	Open in IMG/M
3300031668\|Ga0318542_10106031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1362	Open in IMG/M
3300031668\|Ga0318542_10179971	Not Available	1060	Open in IMG/M
3300031668\|Ga0318542_10205915	Not Available	993	Open in IMG/M
3300031681\|Ga0318572_10564734	Not Available	678	Open in IMG/M
3300031719\|Ga0306917_10393452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1081	Open in IMG/M
3300031744\|Ga0306918_10152815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1706	Open in IMG/M
3300031744\|Ga0306918_10547478	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300031744\|Ga0306918_11281047	Not Available	564	Open in IMG/M
3300031747\|Ga0318502_10413246	Not Available	803	Open in IMG/M
3300031748\|Ga0318492_10083871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1545	Open in IMG/M
3300031748\|Ga0318492_10157546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1148	Open in IMG/M
3300031753\|Ga0307477_10005430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	9119	Open in IMG/M
3300031763\|Ga0318537_10167880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	817	Open in IMG/M
3300031777\|Ga0318543_10012874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2969	Open in IMG/M
3300031777\|Ga0318543_10023310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2340	Open in IMG/M
3300031779\|Ga0318566_10318489	Not Available	769	Open in IMG/M
3300031780\|Ga0318508_1032831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1323	Open in IMG/M
3300031782\|Ga0318552_10464826	Not Available	646	Open in IMG/M
3300031796\|Ga0318576_10018997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2698	Open in IMG/M
3300031797\|Ga0318550_10247264	All Organisms → cellular organisms → Bacteria → Proteobacteria	865	Open in IMG/M
3300031821\|Ga0318567_10315055	Not Available	883	Open in IMG/M
3300031821\|Ga0318567_10347283	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300031879\|Ga0306919_11383898	Not Available	531	Open in IMG/M
3300031880\|Ga0318544_10165699	Not Available	850	Open in IMG/M
3300031880\|Ga0318544_10170721	Not Available	837	Open in IMG/M
3300031890\|Ga0306925_11966929	Not Available	553	Open in IMG/M
3300031894\|Ga0318522_10152307	Not Available	871	Open in IMG/M
3300031897\|Ga0318520_10714589	Not Available	626	Open in IMG/M
3300031910\|Ga0306923_11551531	Not Available	690	Open in IMG/M
3300031912\|Ga0306921_10036277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	5539	Open in IMG/M
3300031941\|Ga0310912_11526079	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300031945\|Ga0310913_10045966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2835	Open in IMG/M
3300031946\|Ga0310910_11074100	Not Available	627	Open in IMG/M
3300031947\|Ga0310909_10028636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	4103	Open in IMG/M
3300031947\|Ga0310909_10174242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1778	Open in IMG/M
3300031954\|Ga0306926_10237881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2257	Open in IMG/M
3300031959\|Ga0318530_10121032	Not Available	1051	Open in IMG/M
3300032001\|Ga0306922_10088432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3261	Open in IMG/M
3300032001\|Ga0306922_10788652	Not Available	994	Open in IMG/M
3300032001\|Ga0306922_10989293	Not Available	869	Open in IMG/M
3300032009\|Ga0318563_10592026	Not Available	598	Open in IMG/M
3300032059\|Ga0318533_10225509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1348	Open in IMG/M
3300032059\|Ga0318533_10519370	Not Available	873	Open in IMG/M
3300032059\|Ga0318533_11345139	Not Available	522	Open in IMG/M
3300032067\|Ga0318524_10546812	Not Available	609	Open in IMG/M
3300032076\|Ga0306924_10188824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2365	Open in IMG/M
3300032090\|Ga0318518_10186430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1061	Open in IMG/M
3300032120\|Ga0316053_121841	Not Available	504	Open in IMG/M
3300032515\|Ga0348332_13730169	Not Available	570	Open in IMG/M
3300032770\|Ga0335085_11641341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	664	Open in IMG/M
3300032955\|Ga0335076_11260551	Not Available	624	Open in IMG/M
3300033158\|Ga0335077_10593676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1157	Open in IMG/M
3300033289\|Ga0310914_10845662	Not Available	814	Open in IMG/M
3300033829\|Ga0334854_155102	Not Available	556	Open in IMG/M
3300034644\|Ga0370548_042857	Not Available	783	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.36%
Host-Associated	Host-Associated	1.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.35%
Aquatic	Environmental → Aquatic	6.01%
Plants	Host-Associated → Plants	1.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.16%
Freshwater	Environmental → Aquatic → Freshwater	4.92%
Sediment	Environmental → Aquatic → Sediment	1.09%
Peat	Environmental → Terrestrial → Peat	1.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.09%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.55%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.60%
Loam	Environmental → Terrestrial → Soil → Loam	10.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.37%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.09%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.09%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.55%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.55%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.55%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	51.37%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.01%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.37%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.09%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.09%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.09%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.55%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.55%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.55%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.55%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.37%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.37%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.37%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.19%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.64%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.64%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.09%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.09%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.55%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.55%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.55%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.55%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.55%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.55%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.55%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.55%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.55%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012376	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012395	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300019192	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZA3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022501	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023672	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030839	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFB (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030913	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030937	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030997	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031590	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032120	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZA5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1012027081	3300002245	Forest Soil	MSAILDFPVKPEARPYLDAFRNTAGEPEWLAGFRKQGLS
C688J35102_1185554802	3300002568	Soil	MSAVLDFPVKPEARPYLDAFGGVNSGEPEWLSRERQRALNRFAELGFPSRRSE
JGI26341J46601_100708261	3300003219	Bog Forest Soil	MSAVVDFPVKPEARPYLDAFGSGDRGRRASEPDWLAGYRGRSLARFAEL
Ga0062387_1008927151	3300004091	Bog Forest Soil	MSAVVDFPVKPEARPYLDAFGSGDPGRRAREPDWLAGYRGRSLARFAELG
Ga0062386_1007193942	3300004152	Bog Forest Soil	MSAVVDFPVKPEARPYLDAFGSGDPGRRAREPDWLAGYRGRSLARFAEL
Ga0058899_100205722	3300004631	Forest Soil	MSAVVDFPVKPETRPYLETFGRARHKGDPDWLAGYRNRSLARFAE
Ga0058899_119410581	3300004631	Forest Soil	MSAVVDFPVKPEARPYLDAFAHGPSGEPEWLAMRRRRSLARFAEQGFPNRRSEAW
Ga0066684_111164811	3300005179	Soil	MSAVLDFPVKPEARPYLDAFDNGVGTGREPAWLSRSRRRGLSRFAEL
Ga0066671_109502311	3300005184	Soil	MSAVLDFPVKPEARPYLDAFGGVNSGEPEWLSRERQRALNRFAE
Ga0066388_1034444902	3300005332	Tropical Forest Soil	MSAVVDFPLKPEARPYLEAFSRGASLRDRQEPAWLGGYRKGSLARF
Ga0066388_1054524232	3300005332	Tropical Forest Soil	MSAAIDFPVKPEARPYLDAFGRDDRDRHVREPEWLAGQRWRSLARFAELGFPSRRSEAWR
Ga0008090_152698382	3300005363	Tropical Rainforest Soil	MSAVVDFPVKLETRPYLEAFGRHRHEDDPDWLTGYRNRNLARFAELGFPSRRSESW
Ga0008090_156849233	3300005363	Tropical Rainforest Soil	MSAVVDFPVKPEARPYLEAFGGDRHKGDPDWLTGYRRRSLARF
Ga0070714_1018597052	3300005435	Agricultural Soil	MSAVVDFPVKPEARPYLEVFGHGAFGRRGREPDWLAEYRKRSLARF
Ga0070710_101375843	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSAVVDFPVKPEARPYLEAFGHGAFGQRGREPDWLAEYRKRSLARFAELGFPSRR
Ga0066670_109059101	3300005560	Soil	MSAVLDFPVKPEARPYLDAFGGVNSGEPEWLSRERQRALNRF
Ga0066670_110171861	3300005560	Soil	MSAVLDFPVKPEARPYLDAFDNGVGTEHEPAWLVRSRRRGLSRFAEL
Ga0066699_111044682	3300005561	Soil	MSAVLDFPVKPEARPYLDAFEGANSGEPEWLSRERQRAL
Ga0066903_1058008871	3300005764	Tropical Forest Soil	MSAVVDFPIKPEARPYLDAFGHHSSGEPEWLGARR
Ga0066652_1003914421	3300006046	Soil	MSAVVDFPVKPETRAYLEAFGRHRRNGDPDWLAGYRNRSLARFAELGFPSRRSEAWRYLD
Ga0070715_108951682	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSAVLDFPVKPEARPYLEALGRTNSGEPEWLSRERQRAL
Ga0075018_104191461	3300006172	Watersheds	MSAVVEFPVKPEARPYLAAFAEVAGEPDWLRKARRT
Ga0070765_1006025901	3300006176	Soil	MSAVVDFPVKPEARPYMDAFHGTAGEPEWLARFRRQGL
Ga0074062_123842141	3300006606	Soil	MSAVLDFPVKPEARPYLDAFRDTAGEPEWLAGFRKQGLS
Ga0066665_112770162	3300006796	Soil	MSAVLDFPVKPEARPYLDAFDRGGVHEPDWLSRERRRALSRF
Ga0079221_107616371	3300006804	Agricultural Soil	MSAVLDFPVKAEARPYLDAFSDSAREPQWLRQARRH
Ga0099795_100631613	3300007788	Vadose Zone Soil	MSAIVDFPVKPEARPYLEAFGRGAFGRGQGEPDWLAGYRKGSLARFAELGFPS
Ga0066710_1019978142	3300009012	Grasslands Soil	MSAVVDFPVKPEARPYLDAFGRDDRRRVREPEWLA
Ga0126374_104149891	3300009792	Tropical Forest Soil	MPMSAVVDFPIKPEARPYLDAFGHHSSGEPEWLGARRRR
Ga0126374_108480301	3300009792	Tropical Forest Soil	MSAIVDFPVKPEARPYLDAFARGDFTRDRREPEWLVGYRKASLARF
Ga0127503_109530552	3300010154	Soil	MPHDLYEVSPMSAVVDFPVKPEARPYLEAFGRDFGRHAREPSWLAGQRRRSLARFAELGF
Ga0134109_100664051	3300010320	Grasslands Soil	MSAVLDFPVKPEARPYLDAFGGVNSGEPEWLGRERQRALNRFAELGFPSRRSENWRYLDL
Ga0126372_110776751	3300010360	Tropical Forest Soil	MSAIVDFPVKPEARPYLDAFARGDFTRDRREPEWLVGYRKASLARFA
Ga0126379_116881642	3300010366	Tropical Forest Soil	MSAVVDFPVKPEARPYLDAFAGASQGEPEWLAARRRR
Ga0126379_117329352	3300010366	Tropical Forest Soil	MSAVVDFPVKPETRPYLDAFTRRPGGEPEWLGARRRRALSRF
Ga0126379_128229491	3300010366	Tropical Forest Soil	MSGVVDFPVKPEARPYLEAFGRDDIIRDRREPDWLVGYRKASLARF
Ga0126383_124236922	3300010398	Tropical Forest Soil	MSAILDFPVKAEARPYLEAFGRGRRGSDPDWLARYRNRGLARFAEIGFPSRRSEAWR
Ga0150983_161165461	3300011120	Forest Soil	MSAVVDFPVKPEARPYLEAFGHGAFGQRGREPDWLAEYRKRSLARFTELGFPSRRSEAWRYLD
Ga0137391_105777691	3300011270	Vadose Zone Soil	MSAVLDFPVKPEARPYLDAFGRGGGHEPDWLSRERRR
Ga0150985_1041400221	3300012212	Avena Fatua Rhizosphere	MSAVLDFPVKPEARPYLDAFGGANSGEPEWLSRERQRALNRFAELGFPSRRSENWRYLD
Ga0150985_1180710262	3300012212	Avena Fatua Rhizosphere	MSAIVDFPVKPEARAYLEAFGRDRHKSDPEWLLGYRKRS
Ga0137390_104600471	3300012363	Vadose Zone Soil	MSAIVDFPVKPETRPYLEAFGRGAFGRDQGEPDWLAGYRK
Ga0134032_11223752	3300012376	Grasslands Soil	MSAVLDFPVKPETRPYLDAFGGANSGEPEWLSRERQRALNRFAELGFPSRRS
Ga0134044_10563972	3300012395	Grasslands Soil	MSAVVDFPVKRETRAYLEAFGRHRRKGDPDWLAGYRN
Ga0137397_104199702	3300012685	Vadose Zone Soil	MPHDLYEVSPMSAVVDFPVKPEARPYLEAFGRDFGRHTREPDWLAGQRRRSLARFAELGFPSRR
Ga0137396_111367031	3300012918	Vadose Zone Soil	MSAVLDFPVKPEARPYLDAFGGANSGEPEWLSRERQRALNRFAELGFPSRRSEN
Ga0137359_115657411	3300012923	Vadose Zone Soil	MSAILDFPVKPEARPYLDAFRNAAGEPEWLARFRKQGLSRFAELGFPSRR
Ga0164309_106831781	3300012984	Soil	MASSKTRREETGATPMSAVVDFPVKPEARPYLEAFGRGGFDRDQDEPDWLAGYRKRSLARFAELGFPSRRSESWRYLDL
Ga0137418_104795852	3300015241	Vadose Zone Soil	MSAVLDFPVKPEARPYLDALDRGAGHEPDWLTRGRRRALSRFAE
Ga0182036_102454941	3300016270	Soil	MSMSAVVDFPVRPEARPYLDAFAGRPSGEPEWLGARRRRGLARFAEQGFPNRRS
Ga0182036_106410591	3300016270	Soil	MPISAVVDFPVRPEARSYLDAFARRLSDEPKWLGARRRRGLARFAEQGFPNRRSE
Ga0182036_113102742	3300016270	Soil	MSARMSAVVEFPVAPEVQPYLDAFRTPAGEPLWLAGLRRRSLARFAEDGFPSRRSE
Ga0182041_117597811	3300016294	Soil	MSAVVDFPIKPEARPYLDAFGHHSSGEPEWLGARRRR
Ga0182033_114903921	3300016319	Soil	MSAIVDFPVKPETRPYLETFGRVRRKGDPDWLAGYRHRSLARFAELG
Ga0182035_101043484	3300016341	Soil	MSAIVDFPVKPEARPYLDSALGSAGEPDWLVRHRRRSLARFAEQGFPSRRGEAW
Ga0182032_103567993	3300016357	Soil	MSAVVNFPVKPEARPYLDAFGRERGKSEPDWLAGYRKGSLARFAELGFPS
Ga0182032_116399982	3300016357	Soil	MSAVVDFPIKPEARPYLDAFGHHSSGEPEWLGARRRRGLTRFAEQGFPSRRSE
Ga0182040_106010772	3300016387	Soil	MPHDRCVTRPMSAIVDFPIRPEARPYIDAFDHRATSEPEWLGARRRRDLTRFAERGFPNRRS
Ga0182040_114353352	3300016387	Soil	MSAVVDFPVRPEARPYLDAFAHRENSEPEWLGARRRRGLA
Ga0182040_118324991	3300016387	Soil	MSAIVDFPVKPEARPYLDSALGSAGEPDWLVRHRRRSLAR
Ga0182037_108370981	3300016404	Soil	MPRELRRTTQMSAVVDFPVKPEARPYLDAYGHRPSGEPEWLGAHRRRGLTRFAEQGFPNR
Ga0182037_121325462	3300016404	Soil	MNAVVDFPVRPEARPYLDAFARRPSGEPKWLGARRRRGLA
Ga0182039_104246211	3300016422	Soil	MSAVVNFPVKPEARPYLDAFGRERGKSEPDWLAGYRKGSLARFAELGFPSRRS
Ga0182038_110611661	3300016445	Soil	MSAVVDFPVKPETRPYLDAFARRPSGEPEWLGARRRRALSRFAEQG
Ga0134069_13375132	3300017654	Grasslands Soil	MSAVLDFPVKPEARPYLDAFEGANSGEPEWLSRERQRALSRFAELGFPS
Ga0187802_102312921	3300017822	Freshwater Sediment	MSAVVDFPVKPEARPYLDAFGSGERGRRAGEPDWLAGYRGRSLARF
Ga0184603_1454592	3300019192	Soil	MSAVVDFPVKPEARPYLDAALGHAGEPDWLARHRRRSLARFAEQGF
Ga0210399_109403041	3300020581	Soil	MSAVVDFPVKPEARPYLDAFGRDDREPDWLAGHRRRSLARFAELGFPSR
Ga0210395_108988702	3300020582	Soil	MSAVVDFPVKPEARPYLEAFGHGAFGQRGREPDWLAEYRKRSLARFAELG
Ga0210401_107804302	3300020583	Soil	MSAVVDFPVKPETRPYLETFGRARHKCDPDWLTGYRN
Ga0210405_100533671	3300021171	Soil	MPHDLYEVSPMSAVVDFPVKPEARLYLEAFGRDFGQHTREPDWLSRQRRRSLARFAELGFPSRRSEAWRYPDLRAL
Ga0213882_102831121	3300021362	Exposed Rock	MSAVVDFPVKPEARPYLDAFGSAKRDEPEWFGRERQR
Ga0210393_116754502	3300021401	Soil	MSAVVDFPVKPETRPYLETFGRARHEGDPEWLAGYRNRGLARFA
Ga0210397_101620531	3300021403	Soil	MSAVVDFPVKPETRPYLETFGRARHEGDPEWLAGYRNRGLARFAELG
Ga0210383_104477731	3300021407	Soil	MSAVVDFPVKPEARPYLDAFAEIASEPDWLRNARRAGLSRFAELG
Ga0210392_102977703	3300021475	Soil	MPHDLYEVSPMSAVVDFPVKPEARLYLEAFGRDFGQHTREPDWLSRQRRRSLARFAELGFPSRRSE
Ga0126371_111293181	3300021560	Tropical Forest Soil	MSAVVEFPVAPEVQPYLDAFRTPASEPLWLAGQRRRNLARFAADGFPS
Ga0126371_126084452	3300021560	Tropical Forest Soil	MSAVVDFPVKLEARPYLEAFGRGDFIRDRREPEWL
Ga0126371_130166012	3300021560	Tropical Forest Soil	MTLVDFPVKPEARPYLDVFTETESEPDWLRRARRASLTRFAE
Ga0242645_10174681	3300022501	Soil	MSAVVDFPVKPETRPYLETFGRARHKGDPDWLTGYRNRSLARFAELGFPSR
Ga0242664_11398012	3300022527	Soil	MSAVVDFPVKPEARPYFDAFVRRHSGEPEWLSARR
Ga0242658_11900102	3300022530	Soil	MSAVVDFPVKPEARPYLEAFGHGAFGQRGREPDWLAEYRKRSLARFTELGFPSR
Ga0242666_10339181	3300022721	Soil	MTTLVDFPVKPEARPYLDAAGSHAGEPDWLASRRQRALARFAEQGFPDRRSEA
Ga0222622_114024191	3300022756	Groundwater Sediment	MSAVLDFPVKPEARPYLDAFDRGAGHEPDWLNRERRRALSRFAELGFPS
Ga0247553_1010233	3300023672	Soil	MNAVVDFPVKPEARPYLDAALGHAGEPDWLARHRRRSLARFAEQGFPSRRG
Ga0224572_10532881	3300024225	Rhizosphere	MNAVVDFPVKPEARPYLDAPLGHAGEPAWLARHRRRSLARFAEQGFPSRRGEAW
Ga0207685_104339882	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MSAIVDFPVKPEARAYLDAFGRDRHKSDPEWLLGYRKRSLARHPNK
Ga0207699_109846162	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSAVVDFPVKPEARPYLEAFGHGAFGQRGREPDWLAEYRKRSLARFAELGFPSRRSEA
Ga0207664_101938063	3300025929	Agricultural Soil	MSAVVDFPVKPETRPYLETFGRARHKCDPDWLTGY
Ga0207664_102810823	3300025929	Agricultural Soil	MSAVVDFPVKPETRPYLETFGRARHKGDPDWLAGYRNRSL
Ga0207665_105862082	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSAVVDFPVKPETRPYLETFGRARHKGDPDWLTGYRNRSLAHFAELGFRLGAARLGVTSI
Ga0209238_10796563	3300026301	Grasslands Soil	MSAVLDFPVKPEARPYLDAFEGANSGEPEWLSRERQRALSRFA
Ga0209265_11912801	3300026308	Soil	MSAVLDFPVKPETRPYLDAFGGANSGEPEWLSRERQRALNRFAELGFPSRRSENWRY
Ga0209059_10832071	3300026527	Soil	MSAVVDFPVKPETRAYLEAFGRHRRKGDPDWLAGYRNRSLA
Ga0209805_13275721	3300026542	Soil	MSAVLDFPVKPEARPYLDAFGGANSGEPEWLSRERQRALNRFAELGFPSRRSENW
Ga0209474_103025072	3300026550	Soil	MSAILDFPVKPEARPYLDAFRNAADEPEWLARFRKQGLSRF
Ga0209648_104488831	3300026551	Grasslands Soil	VSAVVDFPVKPEARPYLEAFGRDRHKNDPDWLAGYRNR
Ga0207862_11467782	3300027703	Tropical Forest Soil	MSAIVAFPVKPEARPYLDAFGRDDRGRRVQEPNWLTGHRKRS
Ga0209248_102319221	3300027729	Bog Forest Soil	MSAVVDFPVKPEARPYLDAALDHAGEPHWLAHYRRRCL
Ga0209038_101517612	3300027737	Bog Forest Soil	MSAVVDFPVKPEARPYLETFGRRHKDDPDWLAGYRNRSLARFAELGFPSRRSEAW
Ga0209655_100599183	3300027767	Bog Forest Soil	MSAVVDFPVKPEARPYLDAFGSGDRGRRAGEPDWLAGYRGRSLARFAEL
Ga0209448_101296611	3300027783	Bog Forest Soil	MPMSAVVDFPVKPEARPYLDAFGRDGLGRVREPNWLVGHRKSSLARFAELGF
Ga0209380_101138843	3300027889	Soil	MSAVLDFPVKPEARPYLDAFRGAGREPDWLSRERRRALSRFAEL
Ga0209380_103047181	3300027889	Soil	MSAVVDFPVKPETRPYLETFGRACHKGDPDWLAGYRNRSLARFAELGFPSRRSE
Ga0209488_106719781	3300027903	Vadose Zone Soil	MSAVVDFPVKPETRPYLETFGHARHNGDPDWLASYRNRSLARF
Ga0222749_105589272	3300029636	Soil	MSAVVDFPVKPEARPYLDAFGRDFGRHAREPLWLAGQRRRSL
Ga0307482_13060961	3300030730	Hardwood Forest Soil	MTTLVDFPVKPEARPYLDAFAQSTGEPEWLARFRRQGLDRFARQGFP
Ga0073999_110736021	3300030839	Soil	MSAIVDFPVKPEARPYLEAFGRGGFGRDQDEPDWLAGYRKGSLARFAELGFPSR
Ga0308202_10193452	3300030902	Soil	MSAVLDFPVKPEARPYLDAFEGANSGEPEWLSRERQRALSRFAELGFPSRRSENW
Ga0265759_1041732	3300030913	Soil	MSAVVDFPVKPETRPYLEAYGLQRHSSDPDWLAAYRNRNLARFAEVGF
Ga0138302_10693151	3300030937	Soil	MSAVIDFPVKPEARPYLETFGHTRRRDDDPGWLAGYRSRSLARFA
Ga0073997_119312082	3300030997	Soil	MSAVVDFPVKPEARPYLDAFGRDFGRHAHEPLWLAGQRRRSLARFAELG
Ga0170834_1032592661	3300031057	Forest Soil	MPHDLYEVSPMSAVVDFPVKPEARPYLEAFGRDFGRHAREPDWLAGQRRRSLARFAELGFPSRRSE
Ga0308204_103568192	3300031092	Soil	MSAVLDFPVKPEARPYLDAFDRAVGMEREPAWLVRSRRRGLSRFAELGF
Ga0170823_145841121	3300031128	Forest Soil	MSAIVDFPVKPEARPYLDAFGRDDRGRRVQEPNWLT
Ga0170824_1070227852	3300031231	Forest Soil	MSAVVDFPVKPEARPYLDAFGRDGRRHPGEPDWLARHRRRSLARFAELGFPN
Ga0170824_1078617271	3300031231	Forest Soil	MSAVVDFPVKPEARPYLDAFGRDFGRHAREPLWLAGQRRRSLARFAELGFPSRRSEA
Ga0302324_1024919382	3300031236	Palsa	MTTLVDFPVKPEARPYLDAFTGVAGEPDWLARVRRQGLS
Ga0170820_100819201	3300031446	Forest Soil	MSAVVDFPVKPEARPYLDAFAHRGSSEPEWLGARRRRGLTRFAEQGFPSRRSESY
Ga0170820_129520241	3300031446	Forest Soil	MSAVVDFPVKPETRPYLETFGRARHGGDPEWLAGYRNRGLARFAELGFPSR
Ga0170818_1073288242	3300031474	Forest Soil	MSAVVDFPVKPEARPYLEAFGHHRHSSDPDWLAGYRTRN
Ga0170818_1084547671	3300031474	Forest Soil	MSAVVDFPVKPEARPYLDVFGHESNGEPEWLGAQRRRGLTRFAEQGFPSRRSEAWR
Ga0318534_100283515	3300031544	Soil	MSGVVDFPVKPEARPYLEAFGRGDFIRDRREPDWLVGYRKASLARFAE
Ga0318541_100326354	3300031545	Soil	MPMSAVVDFPVRPEARPYLDAFAHRPSGEPEWLGAHRRRGLT
Ga0318571_100075091	3300031549	Soil	MSTVVDFPVKPEARPYLDAFGSGDLGRRARDPDWLAGHRKRSLARFAELGFPSRRSEAWRYLDLRG
Ga0318528_106569092	3300031561	Soil	MSAVVNFPVKPEARPYLDAFGRERGKSEPDWLAGYR
Ga0307483_10090992	3300031590	Hardwood Forest Soil	MSAVVDFPVKPETRPYLETFGRTRHKDDPDWLAGYRN
Ga0318555_103210122	3300031640	Soil	MPMSAVVDFPVRPEARPYLDAFAHRPSGEPEWLGACRRRGLARFAEQGFPNRRSEA
Ga0318542_101060313	3300031668	Soil	MSAVVDFPVKPEARPYLDAFAHHLSGEPEWLSAHRRRGLTRFVEQGFPSRRS
Ga0318542_101799712	3300031668	Soil	MSTIVDFPVKAEARPYLEAFGRGSFLRDRQEPDWLAGYRKASLARF
Ga0318542_102059151	3300031668	Soil	MSAVVNFPVKPEARPYLDAFGRERGKSEPDWLAGYRKGS
Ga0318572_105647341	3300031681	Soil	MSTIVDFPVKAEARPYLEAFGRGSFLRDRQEPDWLAGYRKAS
Ga0306917_103934521	3300031719	Soil	MNVLVDFPVKPEARPYLEAFGHGAFGRQKREPDWLTGYRKGSLARFAELGFPSRRSE
Ga0306918_101528153	3300031744	Soil	MSTIVDFPVKAEARPYLEAFGRGSFLRDRQEPDWLAGYRKASLARFAELG
Ga0306918_105474782	3300031744	Soil	MSAAIDFPVKPEARPYLDAFGRDDRDRHVREPEWLAGQRWRSLARFAELG
Ga0306918_112810472	3300031744	Soil	MSAIVDFPIRPEARPYIDAFDHRATSEPEWLGARRRRDLTRFAERGFPNRR
Ga0318502_104132461	3300031747	Soil	MNAVVDFPVRPEARPYLDAFARRPSGEPEWLGACRRRGLARFAEQG
Ga0318492_100838711	3300031748	Soil	MSAVVNFPVKPEARPYLDAFGRERGKSEPDWLAGYRKGSLARFAEL
Ga0318492_101575461	3300031748	Soil	MSAVVDFPVRPEARPYLDAFARRPSGEPEWLGACRRRGLARFAEQGFPNRR
Ga0307477_100054301	3300031753	Hardwood Forest Soil	MSAVVDFPVKPEARPYLDAFALGPSGEPEWLGMHRRRGLARF
Ga0318537_101678802	3300031763	Soil	MSTVVDFPVKPEARPYLDAFGSGDPGRRARDPDWLAGHRKRSLARFAELGFPSRRSEAWRYVD
Ga0318543_100128741	3300031777	Soil	MSTVVDFPVKPEARPYLDAFGSGDPGRRARDPDWLAGHRKRSLARFAE
Ga0318543_100233101	3300031777	Soil	MSAVVDFPVKPEARPYLDAFAHHLSGEPEWLSAHRR
Ga0318566_103184892	3300031779	Soil	MSAVVDFPVKPQARPYLDAYDRLPSGEPEWLGAHRRRGLARFAEQGFPDRRSE
Ga0318508_10328313	3300031780	Soil	MSAAIDFPVKPEARPYLDAFGRDDRDRHVREPEWLA
Ga0318552_104648262	3300031782	Soil	MNVLVDFPVKPEARPYLEAFGRGAFGRQKREPDWLIGYRKGSL
Ga0318576_100189971	3300031796	Soil	MSAVVNFPVKPEARPYLDAFGRERGKSEPDWLAGYRKGSLA
Ga0318550_102472643	3300031797	Soil	MSAVVDFPVRPEARPYLDAFAHRPSGEPEWLGAHRRRGLT
Ga0318567_103150551	3300031821	Soil	MPRELRRTTQMSAVVDFPVKPEARPYLDAYGHRPSGEPEWLGAHRRRVLTRFAEQGFPNRRSEAWRYI
Ga0318567_103472832	3300031821	Soil	MSAVVNFPVKPEARPYLDAFGRERGKSEPDWLAGYRKGSLARFAELGF
Ga0306919_113838981	3300031879	Soil	MSAIVDFPVRPEARPYLDAFARHLSDEPEWLGARRRRGL
Ga0318544_101656991	3300031880	Soil	MSAIVDFPIRPEARPYIDAFDHCATSEPEWLGARRRRDLTRFAERGFPNRRSEAWRY
Ga0318544_101707211	3300031880	Soil	MSAVVDFPVRPEARPYLDAFAHRPSGEPEWLGARRR
Ga0306925_119669292	3300031890	Soil	MSAVVDFPVKPEARPYLDAFGGGDSGRRAREPDWLTRHRGRSLARFAELGF
Ga0318522_101523072	3300031894	Soil	MPRELRRTTQMSAVVDFPVKPEARPYLDAYGHRPSGEPEWLGAHRRRGLTRFAEQGF
Ga0318520_107145891	3300031897	Soil	MSAVVDFPVRPEARPYLDAFAHRPSGEPEWLGARRRRGLTRFAEQGFPNRR
Ga0306923_115515311	3300031910	Soil	MSTVVDFPVKPEARPYLDAFGSGDPGRRARDPDWLAGHRKRSLARF
Ga0306921_100362771	3300031912	Soil	MSAIVDFPVKPEARPYLDAFGRDDRGRRVPEPDWLT
Ga0310912_115260791	3300031941	Soil	MSAVVDFPVKPETRPYLDAFARRQSGEPEWLGARRRRGLSRFAEQG
Ga0310913_100459661	3300031945	Soil	MSAVVDFPVRPEARPYLDAFAHRPSGEPEWLGAHRRRGLTRFAEQGFP
Ga0310910_110741002	3300031946	Soil	MSAIVDFPVKPETRPYLETFGRVRRKGDPDWLAGYRHRSLARFAELGFPS
Ga0310909_100286365	3300031947	Soil	MSGVVDFPVKPEARPYLEAFGRGDFIRDRREPDWLVGYRKASLARFAELGFPS
Ga0310909_101742421	3300031947	Soil	MSAVVDFPVKPEARPYLDAFAHHLSGEPEWLSAHRRRGLT
Ga0306926_102378813	3300031954	Soil	MPRELRRTTQMSAVVDFPVKPEARPYLDAYGHRPSGEPEWLGAHRRRGLTRFAEQGFPNRRSEA
Ga0318530_101210322	3300031959	Soil	MNAVVDFPVKPEARPYLEAFGGDRHKGDPDWLTGYR
Ga0306922_100884321	3300032001	Soil	MSAVVDFPVKPEARPYLDAFAHHLNGEPEWLSAHRRRGLTRFVEQGFPNRRSEAWR
Ga0306922_107886521	3300032001	Soil	MSAIVDFPVKPEARPYLDSALGSAGEPDWLVRHRRRSLARFAEQGFPSRRGE
Ga0306922_109892932	3300032001	Soil	MNDVIDFPVKPETRAYLDAFAARGWQAQEPDWLAGYRRRSLARFAELGFPSRRGEA
Ga0318563_105920261	3300032009	Soil	MSMSAVVDFPVRPEARPYLDAFAGRPSGEPEWLGARRRRGLARFAEQGFPN
Ga0318533_102255093	3300032059	Soil	MSAVVDFPVKPEARPYLDAFAHHLNGEPEWLSAHRRRGLTRFVEQGFPNRRSEAW
Ga0318533_105193702	3300032059	Soil	MSAVVDFPIKPEARPYLDAFGHHSSGEPEWLGARRRRGLTRFAEHGFP
Ga0318533_113451391	3300032059	Soil	MPMSAVLNFPVKPEARPYLEAFGREQGKGEPDWLAGYRKGSLARFAELG
Ga0318524_105468122	3300032067	Soil	MNVLVDFPVKPEARPYLEAFGHGAFGRQKREPDWLTGY
Ga0306924_101888243	3300032076	Soil	MSTVVDFPVKPEARPYLDAFGSGDPGRRARDPDWLAGHRKRSLAR
Ga0318518_101864301	3300032090	Soil	MSAVVNFPVKPEARPYLDAFGRERGKSEPDWLAGYRK
Ga0316053_1218411	3300032120	Soil	MSAVVDFPAKPEARPYLDAALGHAGEPDWLARHRRRSLARFAEQGFPSRRGEA
Ga0348332_137301691	3300032515	Plant Litter	MSAVVDFPVKPEARPYLDSFGRRGDEPDWLARLRRRGLARFGEEG
Ga0335085_116413411	3300032770	Soil	MSAVLDFPVKPEARPYLDAFVEDAREPQWLREARRRALGRFAELGFPTRK
Ga0335076_112605512	3300032955	Soil	MNAVVDFPVKPEARPYLDAFSGTAGEPEWLARFRQRGLSR
Ga0335077_105936763	3300033158	Soil	MSAVVEFPVKPEARPYIDAFADDGREPRWLRDARQQGLDRFARQGF
Ga0310914_108456622	3300033289	Soil	MNAVVDFPVKPEARPYLEAFGGDRHKGDPDWLTGY
Ga0334854_155102_421_555	3300033829	Soil	MSAVVDFPVKPEARPYLDAFAETASEPDWLRRARQVSLSRFAELG
Ga0370548_042857_1_129	3300034644	Soil	MPMSVIVDFPVRPEARPYIEAFGRSALDRHRGEPDWLAGYRTG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F031267

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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