Metagenome / Metatranscriptome Family F031202

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F031202
Family Type	Metagenome / Metatranscriptome
Number of Sequences	183
Average Sequence Length	45 residues
Representative Sequence	MSDPDRLTSHDDKTFDRDTRGLILRIIVVAFLGALFWHTVIAAGRP
Number of Associated Samples	111
Number of Associated Scaffolds	183

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	81.87 %
% of genes near scaffold ends (potentially truncated)	18.58 %
% of genes from short scaffolds (< 2000 bps)	83.61 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.820 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.590 % of family members)
Environment Ontology (ENVO)	Unclassified (43.169 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (75.410 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.05% β-sheet: 0.00% Coil/Unstructured: 45.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 183 Family Scaffolds
PF06080	DUF938	11.48
PF00106	adh_short	3.28
PF08734	GYD	3.28
PF08240	ADH_N	2.73
PF14742	GDE_N_bis	2.19
PF12327	FtsZ_C	1.64
PF12832	MFS_1_like	1.09
PF13602	ADH_zinc_N_2	1.09
PF09721	Exosortase_EpsH	1.09
PF04773	FecR	1.09
PF00982	Glyco_transf_20	1.09
PF02547	Queuosine_synth	1.09
PF07690	MFS_1	1.09
PF00072	Response_reg	0.55
PF04657	DMT_YdcZ	0.55
PF08401	ArdcN	0.55
PF00873	ACR_tran	0.55
PF13847	Methyltransf_31	0.55
PF13426	PAS_9	0.55
PF12802	MarR_2	0.55
PF12680	SnoaL_2	0.55
PF13610	DDE_Tnp_IS240	0.55
PF01593	Amino_oxidase	0.55
PF03060	NMO	0.55
PF01156	IU_nuc_hydro	0.55
PF07992	Pyr_redox_2	0.55
PF13701	DDE_Tnp_1_4	0.55
PF00665	rve	0.55
PF02371	Transposase_20	0.55
PF01494	FAD_binding_3	0.55
PF03776	MinE	0.55
PF07700	HNOB	0.55
PF00528	BPD_transp_1	0.55
PF00144	Beta-lactamase	0.55
PF01381	HTH_3	0.55
PF01695	IstB_IS21	0.55
PF00082	Peptidase_S8	0.55
PF09996	DUF2237	0.55
PF01548	DEDD_Tnp_IS110	0.55
PF10009	DUF2252	0.55
PF07508	Recombinase	0.55
PF01527	HTH_Tnp_1	0.55
PF07366	SnoaL	0.55

COG ID	Name	Functional Category	% Frequency in 183 Family Scaffolds
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	3.28
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	1.09
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.09
COG0809	S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)	Translation, ribosomal structure and biogenesis [J]	1.09
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.09
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.55
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.55
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.55
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.55
COG0851	Septum formation topological specificity factor MinE	Cell cycle control, cell division, chromosome partitioning [D]	0.55
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.55
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.55
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.55
COG1957	Inosine-uridine nucleoside N-ribohydrolase	Nucleotide transport and metabolism [F]	0.55
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.55
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.55
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.55
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.55
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.55
COG3238	Uncharacterized membrane protein YdcZ, DUF606 family	Function unknown [S]	0.55
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.55
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	0.55
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.55

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.82 %
All Organisms	root	All Organisms	49.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.82 %
cellular organisms	root	All Organisms → cellular organisms	49.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.82 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.73 %
Roseiarcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae	1.64 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.09 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.09 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.55 %
Devosiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.82 %
Roseiarcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus	1.64 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.09 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.09 %
Devosia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia	0.55 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.55 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	0.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.82 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1.64 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.09 %
Methylobacterium variabile	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium variabile	0.55 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.55 %
Devosia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia	0.55 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	0.55 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001471\|JGI12712J15308_10071596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	877	Open in IMG/M
3300001471\|JGI12712J15308_10193352	Not Available	533	Open in IMG/M
3300001546\|JGI12659J15293_10001655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	6967	Open in IMG/M
3300001546\|JGI12659J15293_10127402	Not Available	554	Open in IMG/M
3300001593\|JGI12635J15846_10059452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2872	Open in IMG/M
3300002245\|JGIcombinedJ26739_100078299	All Organisms → cellular organisms → Bacteria	3064	Open in IMG/M
3300002245\|JGIcombinedJ26739_100130653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2369	Open in IMG/M
3300002245\|JGIcombinedJ26739_100369188	All Organisms → cellular organisms → Bacteria → Proteobacteria	1315	Open in IMG/M
3300002245\|JGIcombinedJ26739_100370235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1313	Open in IMG/M
3300002245\|JGIcombinedJ26739_100442503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1177	Open in IMG/M
3300004080\|Ga0062385_10938689	Not Available	577	Open in IMG/M
3300004092\|Ga0062389_104570725	Not Available	521	Open in IMG/M
3300004152\|Ga0062386_101225682	Not Available	624	Open in IMG/M
3300004635\|Ga0062388_101975193	Not Available	603	Open in IMG/M
3300005439\|Ga0070711_100999163	Not Available	718	Open in IMG/M
3300005602\|Ga0070762_10039564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2560	Open in IMG/M
3300005602\|Ga0070762_10071516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1954	Open in IMG/M
3300005602\|Ga0070762_10136087	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300005712\|Ga0070764_10892074	Not Available	557	Open in IMG/M
3300006052\|Ga0075029_101360731	Not Available	500	Open in IMG/M
3300006059\|Ga0075017_100989519	Not Available	655	Open in IMG/M
3300006102\|Ga0075015_100435171	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300006162\|Ga0075030_100836476	Not Available	727	Open in IMG/M
3300006173\|Ga0070716_101734406	Not Available	516	Open in IMG/M
3300006174\|Ga0075014_100625073	Not Available	618	Open in IMG/M
3300006175\|Ga0070712_101580204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	574	Open in IMG/M
3300006175\|Ga0070712_101633906	All Organisms → cellular organisms → Bacteria → Proteobacteria	564	Open in IMG/M
3300006175\|Ga0070712_101889832	Not Available	523	Open in IMG/M
3300006176\|Ga0070765_100165933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1982	Open in IMG/M
3300006176\|Ga0070765_100924409	Not Available	824	Open in IMG/M
3300006176\|Ga0070765_101393496	Not Available	661	Open in IMG/M
3300009522\|Ga0116218_1099225	All Organisms → cellular organisms → Bacteria → Proteobacteria	1326	Open in IMG/M
3300009524\|Ga0116225_1548371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	513	Open in IMG/M
3300009672\|Ga0116215_1236032	All Organisms → cellular organisms → Bacteria → Proteobacteria	801	Open in IMG/M
3300009683\|Ga0116224_10177719	Not Available	1022	Open in IMG/M
3300009683\|Ga0116224_10622086	Not Available	516	Open in IMG/M
3300009698\|Ga0116216_10168863	All Organisms → cellular organisms → Bacteria → Proteobacteria	1344	Open in IMG/M
3300009700\|Ga0116217_10902469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300009824\|Ga0116219_10046018	All Organisms → cellular organisms → Bacteria → Proteobacteria	2596	Open in IMG/M
3300010339\|Ga0074046_10525257	Not Available	705	Open in IMG/M
3300010343\|Ga0074044_10986109	Not Available	552	Open in IMG/M
3300010343\|Ga0074044_11059814	Not Available	532	Open in IMG/M
3300010371\|Ga0134125_10634793	Not Available	1180	Open in IMG/M
3300010376\|Ga0126381_102628617	Not Available	720	Open in IMG/M
3300010379\|Ga0136449_100079449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6931	Open in IMG/M
3300010379\|Ga0136449_100084063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6684	Open in IMG/M
3300010379\|Ga0136449_100506368	All Organisms → cellular organisms → Bacteria	2095	Open in IMG/M
3300010379\|Ga0136449_100725463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1661	Open in IMG/M
3300010379\|Ga0136449_101435062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1062	Open in IMG/M
3300010379\|Ga0136449_102214030	Not Available	801	Open in IMG/M
3300010876\|Ga0126361_10579256	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300012683\|Ga0137398_10987754	Not Available	584	Open in IMG/M
3300012924\|Ga0137413_10123012	Not Available	1656	Open in IMG/M
3300012925\|Ga0137419_11232821	Not Available	627	Open in IMG/M
3300012927\|Ga0137416_11460972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	620	Open in IMG/M
3300012955\|Ga0164298_10370829	Not Available	914	Open in IMG/M
3300012955\|Ga0164298_10705841	Not Available	708	Open in IMG/M
3300012957\|Ga0164303_11145657	Not Available	565	Open in IMG/M
3300012958\|Ga0164299_10615837	Not Available	745	Open in IMG/M
3300012960\|Ga0164301_10312572	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300012961\|Ga0164302_11218406	Not Available	603	Open in IMG/M
3300012984\|Ga0164309_11391796	Not Available	597	Open in IMG/M
3300012985\|Ga0164308_11875224	Not Available	559	Open in IMG/M
3300012987\|Ga0164307_10842757	Not Available	732	Open in IMG/M
3300012987\|Ga0164307_11464922	Not Available	576	Open in IMG/M
3300012987\|Ga0164307_11775814	Not Available	523	Open in IMG/M
3300012989\|Ga0164305_11531031	Not Available	593	Open in IMG/M
3300014501\|Ga0182024_10172103	All Organisms → cellular organisms → Bacteria → Proteobacteria	3004	Open in IMG/M
3300015206\|Ga0167644_1007624	All Organisms → cellular organisms → Bacteria → Proteobacteria	5690	Open in IMG/M
3300015206\|Ga0167644_1038470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1835	Open in IMG/M
3300017822\|Ga0187802_10168594	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300017932\|Ga0187814_10224563	Not Available	709	Open in IMG/M
3300017943\|Ga0187819_10609945	Not Available	618	Open in IMG/M
3300017946\|Ga0187879_10311044	All Organisms → cellular organisms → Bacteria → Proteobacteria	875	Open in IMG/M
3300020579\|Ga0210407_10010861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6786	Open in IMG/M
3300020579\|Ga0210407_10011539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae → Devosia	6581	Open in IMG/M
3300020579\|Ga0210407_10028267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4170	Open in IMG/M
3300020579\|Ga0210407_10030248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4024	Open in IMG/M
3300020579\|Ga0210407_10103847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2161	Open in IMG/M
3300020579\|Ga0210407_10226722	Not Available	1454	Open in IMG/M
3300020579\|Ga0210407_10265028	All Organisms → cellular organisms → Bacteria	1339	Open in IMG/M
3300020579\|Ga0210407_10546461	Not Available	904	Open in IMG/M
3300020580\|Ga0210403_10857053	Not Available	719	Open in IMG/M
3300020580\|Ga0210403_11220574	Not Available	578	Open in IMG/M
3300020581\|Ga0210399_10803040	All Organisms → cellular organisms → Bacteria → Proteobacteria	768	Open in IMG/M
3300020582\|Ga0210395_10132902	Not Available	1852	Open in IMG/M
3300020582\|Ga0210395_11254294	Not Available	544	Open in IMG/M
3300020583\|Ga0210401_10492263	Not Available	1089	Open in IMG/M
3300020583\|Ga0210401_11236658	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300021088\|Ga0210404_10668514	Not Available	592	Open in IMG/M
3300021168\|Ga0210406_10011577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	8592	Open in IMG/M
3300021168\|Ga0210406_10015208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7337	Open in IMG/M
3300021168\|Ga0210406_10022501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5847	Open in IMG/M
3300021168\|Ga0210406_10839400	All Organisms → cellular organisms → Bacteria → Proteobacteria	696	Open in IMG/M
3300021168\|Ga0210406_11240439	Not Available	540	Open in IMG/M
3300021178\|Ga0210408_10139424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1918	Open in IMG/M
3300021178\|Ga0210408_10251604	Not Available	1407	Open in IMG/M
3300021178\|Ga0210408_10705154	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300021178\|Ga0210408_11518603	Not Available	501	Open in IMG/M
3300021180\|Ga0210396_10595571	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300021181\|Ga0210388_10872851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	777	Open in IMG/M
3300021401\|Ga0210393_10408406	Not Available	1107	Open in IMG/M
3300021402\|Ga0210385_10595754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	843	Open in IMG/M
3300021404\|Ga0210389_10492432	Not Available	965	Open in IMG/M
3300021404\|Ga0210389_10633134	Not Available	840	Open in IMG/M
3300021404\|Ga0210389_10931193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	676	Open in IMG/M
3300021405\|Ga0210387_11369804	Not Available	609	Open in IMG/M
3300021405\|Ga0210387_11657872	Not Available	543	Open in IMG/M
3300021406\|Ga0210386_10413317	Not Available	1163	Open in IMG/M
3300021420\|Ga0210394_10798976	Not Available	824	Open in IMG/M
3300021433\|Ga0210391_10554043	Not Available	903	Open in IMG/M
3300021474\|Ga0210390_10533008	Not Available	988	Open in IMG/M
3300021475\|Ga0210392_10776987	Not Available	715	Open in IMG/M
3300021475\|Ga0210392_11009792	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300021478\|Ga0210402_11396571	Not Available	627	Open in IMG/M
3300021479\|Ga0210410_10080661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2860	Open in IMG/M
3300021479\|Ga0210410_10893621	Not Available	775	Open in IMG/M
3300021479\|Ga0210410_11189836	Not Available	654	Open in IMG/M
3300024227\|Ga0228598_1068447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium variabile	709	Open in IMG/M
3300024227\|Ga0228598_1075163	Not Available	676	Open in IMG/M
3300025939\|Ga0207665_11147209	Not Available	620	Open in IMG/M
3300026551\|Ga0209648_10620160	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300026555\|Ga0179593_1025039	Not Available	2022	Open in IMG/M
3300027117\|Ga0209732_1058530	Not Available	670	Open in IMG/M
3300027117\|Ga0209732_1083645	All Organisms → cellular organisms → Bacteria → Proteobacteria	556	Open in IMG/M
3300027174\|Ga0207948_1042175	All Organisms → cellular organisms → Bacteria → Proteobacteria	550	Open in IMG/M
3300027297\|Ga0208241_1046650	All Organisms → cellular organisms → Bacteria → Proteobacteria	684	Open in IMG/M
3300027604\|Ga0208324_1139393	Not Available	664	Open in IMG/M
3300027619\|Ga0209330_1113717	Not Available	614	Open in IMG/M
3300027696\|Ga0208696_1135545	Not Available	803	Open in IMG/M
3300027696\|Ga0208696_1154811	Not Available	740	Open in IMG/M
3300027767\|Ga0209655_10303394	Not Available	515	Open in IMG/M
3300027824\|Ga0209040_10038679	All Organisms → cellular organisms → Bacteria	2956	Open in IMG/M
3300027824\|Ga0209040_10235690	All Organisms → cellular organisms → Bacteria → Proteobacteria	926	Open in IMG/M
3300027853\|Ga0209274_10464420	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300027854\|Ga0209517_10362122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	827	Open in IMG/M
3300027879\|Ga0209169_10321398	Not Available	814	Open in IMG/M
3300027879\|Ga0209169_10558216	Not Available	600	Open in IMG/M
3300027884\|Ga0209275_10461861	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300027889\|Ga0209380_10457319	All Organisms → cellular organisms → Bacteria → Proteobacteria	746	Open in IMG/M
3300027895\|Ga0209624_10000568	All Organisms → cellular organisms → Bacteria → Proteobacteria	32612	Open in IMG/M
3300027895\|Ga0209624_10873460	Not Available	588	Open in IMG/M
3300027908\|Ga0209006_10034306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4594	Open in IMG/M
3300027908\|Ga0209006_10051993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3678	Open in IMG/M
3300027908\|Ga0209006_10164503	All Organisms → cellular organisms → Bacteria → Proteobacteria	1942	Open in IMG/M
3300027908\|Ga0209006_10425957	All Organisms → cellular organisms → Bacteria → Proteobacteria	1115	Open in IMG/M
3300027908\|Ga0209006_10448679	Not Available	1081	Open in IMG/M
3300027908\|Ga0209006_10506839	All Organisms → cellular organisms → Bacteria → Proteobacteria	1006	Open in IMG/M
3300028536\|Ga0137415_10327542	All Organisms → cellular organisms → Bacteria → Proteobacteria	1335	Open in IMG/M
3300028906\|Ga0308309_11214698	All Organisms → cellular organisms → Bacteria → Proteobacteria	650	Open in IMG/M
3300030659\|Ga0316363_10140021	Not Available	1045	Open in IMG/M
3300030659\|Ga0316363_10152275	Not Available	991	Open in IMG/M
3300030764\|Ga0265720_1008553	Not Available	667	Open in IMG/M
3300030862\|Ga0265753_1121763	Not Available	547	Open in IMG/M
3300030940\|Ga0265740_1032412	Not Available	586	Open in IMG/M
3300031122\|Ga0170822_13934314	Not Available	512	Open in IMG/M
3300031446\|Ga0170820_16206965	Not Available	548	Open in IMG/M
3300031446\|Ga0170820_17860630	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300031469\|Ga0170819_16024415	All Organisms → cellular organisms → Bacteria → Proteobacteria	547	Open in IMG/M
3300031474\|Ga0170818_112130529	Not Available	606	Open in IMG/M
3300031708\|Ga0310686_100473520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4840	Open in IMG/M
3300031708\|Ga0310686_100711671	All Organisms → cellular organisms → Bacteria	15755	Open in IMG/M
3300031715\|Ga0307476_10083863	All Organisms → cellular organisms → Bacteria → Proteobacteria	2228	Open in IMG/M
3300031715\|Ga0307476_10118550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1883	Open in IMG/M
3300031715\|Ga0307476_10684315	Not Available	760	Open in IMG/M
3300031715\|Ga0307476_10903789	Not Available	652	Open in IMG/M
3300031715\|Ga0307476_11191365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	558	Open in IMG/M
3300031715\|Ga0307476_11345116	Not Available	521	Open in IMG/M
3300031718\|Ga0307474_10743916	Not Available	775	Open in IMG/M
3300031718\|Ga0307474_11553034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	520	Open in IMG/M
3300031823\|Ga0307478_10297158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1322	Open in IMG/M
3300031823\|Ga0307478_10519377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	993	Open in IMG/M
3300031823\|Ga0307478_11575859	Not Available	543	Open in IMG/M
3300031823\|Ga0307478_11585321	Not Available	541	Open in IMG/M
3300031910\|Ga0306923_11861285	Not Available	616	Open in IMG/M
3300031912\|Ga0306921_10300421	All Organisms → cellular organisms → Bacteria → Proteobacteria	1880	Open in IMG/M
3300031941\|Ga0310912_10476164	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300031954\|Ga0306926_11724417	All Organisms → cellular organisms → Bacteria → Proteobacteria	714	Open in IMG/M
3300032160\|Ga0311301_10328319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2418	Open in IMG/M
3300032160\|Ga0311301_10458426	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300032160\|Ga0311301_10874699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1216	Open in IMG/M
3300033402\|Ga0326728_10213191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1916	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.91%
Host-Associated	Host-Associated	1.09%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.16%
Aquatic	Environmental → Aquatic	8.74%
Plants	Host-Associated → Plants	1.09%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.62%
Freshwater	Environmental → Aquatic → Freshwater	6.01%
Sediment	Environmental → Aquatic → Sediment	2.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.09%
Peat	Environmental → Terrestrial → Peat	0.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.93%
Loam	Environmental → Terrestrial → Soil → Loam	23.50%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.09%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.55%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.52%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	20.22%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.37%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.28%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.73%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.64%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.55%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	13.11%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	12.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.29%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.10%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.56%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.83%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.28%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.28%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.64%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.64%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.09%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.09%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.55%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.55%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.55%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.55%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027117	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030764	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030940	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12712J15308_100715962	3300001471	Forest Soil	MSDPDRLTSHDKTFDRDTRGLILRIIVVTLLAVLFWHTVVATGRL*
JGI12712J15308_101933522	3300001471	Forest Soil	MNDPDRLTSSDGTASPLDTQGLILRIIVVAFLAALFWHTVVATALP*
JGI12659J15293_100016552	3300001546	Forest Soil	MSEPDRLTSRDDTASAIDKQGLILRIIVVAFLAALFWHTVMAAAVP*
JGI12659J15293_101274021	3300001546	Forest Soil	MSDPDRLTSHDDKTFGRDTRGLILRIFVVAFLAALFWHTVIAAALP*
JGI12635J15846_100594523	3300001593	Forest Soil	MSDPGRLTSHDKSFDADTRGLILRIVVVVFLAVLFWQAVIAAGRT*
JGIcombinedJ26739_1000782992	3300002245	Forest Soil	MSDPERLTSHDDTAHDTRGLILRIVVVVFLGVLFWHAVIAAGRL*
JGIcombinedJ26739_1001306534	3300002245	Forest Soil	MSDPDRLTSRADTASVLETRGLVLRIVVVAFLAALFWHTVIATALP*
JGIcombinedJ26739_1003691882	3300002245	Forest Soil	MSDPDRLTSHDDRTFGLDTRGLILRIIVVASLAALFWHTVIAAGLP*
JGIcombinedJ26739_1003702352	3300002245	Forest Soil	MSDPDRLTSHDDKTFGRGTRGLILRIFVVAFLAALFWHTVIAAALP*
JGIcombinedJ26739_1004425032	3300002245	Forest Soil	MSDPDRLTSRDETASVLETRGLILRIVVVAFLAALFWHTVIAAGLP*
Ga0062385_109386892	3300004080	Bog Forest Soil	MSDPDWLTSHDDKAYGRDTRGLILRIVVVAFLGVIFWQAIIAAGRL*
Ga0062389_1045707251	3300004092	Bog Forest Soil	MSDPDRLPSRDKTFGRHTRGLILRIIVVACLGVLFWQAIIAAGSL*
Ga0062386_1012256821	3300004152	Bog Forest Soil	MSDPDWLASHDDKACGHDTRGLILRIIVVAFLGMLFWHAVIAAGRL*
Ga0062388_1019751932	3300004635	Bog Forest Soil	MSGPDRLTSHDDTARDMRSLILRIFVVAFLGMLFLQATIAAGML*
Ga0070711_1009991632	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSDPNRLTSHADKTFGRDTRVLILRIFVVACLGVLFWQAIIA
Ga0070762_100395644	3300005602	Soil	MSDPDRLTSSDHKIIGPDTRGLILRIIVVAFLGALFWHTVIGAGTP*
Ga0070762_100715161	3300005602	Soil	MSDPDRLTSREDTASVLKTRGLILRIIVVAFLAALFWHTVIVAGSL*
Ga0070762_101360872	3300005602	Soil	MSDPDRLTSHDKTFGCDTRGLILRIIVVAFLGMVFWQAILAAGRL*
Ga0070764_108920741	3300005712	Soil	MSDPDRLTSHDKTFGCDTRGLILRIIVVAFLAALFWHTVIAAGTP*
Ga0075029_1013607312	3300006052	Watersheds	MSDPDPLTSHDDIARGRDTRGLILRIIVVAFLGVLFWQAIIAAGRL*
Ga0075017_1009895191	3300006059	Watersheds	MSDPDRLTSHDDTARGRDTRGLILRIIVVAVLGVLFWQAIIAAGRL*
Ga0075015_1004351711	3300006102	Watersheds	MSDPDRLTSHDDMARGRDTRGLILRIIVVAFLGVLFWQAIIAAGRP*
Ga0075030_1008364763	3300006162	Watersheds	MSDPDRLTSRDDMARGQDTRGLILRIIVVAFLGVLFWQAIIAAGRP*
Ga0070716_1017344062	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	FRMSDPDRLTSRADTASVLETRGLVLRIVVVAFLAALFWHTVIATASVTP*
Ga0075014_1006250731	3300006174	Watersheds	FRMSDPDWLTSDHKILGPNTSGLILRIFVVAFLGLLFWHMVIATGTP*
Ga0070712_1015802041	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	FRMSDPDRLTSHDKTLGRDTRNLILRIFVVAFLGVLFWQAIIAAGTL*
Ga0070712_1016339062	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSDPDRLTSRADTASVLETRGLVLRIVVVAFLAALFWHTVVAAALP*
Ga0070712_1018898321	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSDPDRLSSHDDKTFGRDARGLFLRILVVACLGMLFWQAIIAAERL*
Ga0070765_1001659333	3300006176	Soil	MSDPDRLTSHDDKTFGRDTRLLILRIFVVACLGAFFWHTVIAAGSP*
Ga0070765_1009244093	3300006176	Soil	MSDPDRLTSHDDQTFGLDTRGLILRITVVAFIAALFWHMVVGTGTP*
Ga0070765_1013934961	3300006176	Soil	MSDPDRLSSHDDKTFGRDARGLILRILVVACLGMLFWQAIIAAERL*
Ga0116218_10992252	3300009522	Peatlands Soil	MSDRDRLTPHDKTFDRDTRGLILRIIVVAFLGVLFWHAVIAAERL*
Ga0116225_15483711	3300009524	Peatlands Soil	MSDRDWLTSHDDKACGRDTRGLIVRIIVGAVLGVLFWHAVIAA
Ga0116215_12360323	3300009672	Peatlands Soil	NGYRMSDPDWLTSHDDKACGRDTRGLILRIIVVAFLGVLFWHAVIAAERL*
Ga0116224_101777191	3300009683	Peatlands Soil	MSDRDWLTSHDDKACGRDTRGLILRIIVVAFLGVLFWHAVIAAERL*
Ga0116224_106220861	3300009683	Peatlands Soil	YRMSDPDMLTSHDDKACGRDTRGLILRIFVVAFLGMLFWHAVIVAGRL*
Ga0116216_101688632	3300009698	Peatlands Soil	MSDPDWLTSHDDKACGRDTRGLILRIIVVAFLGVLFWHAVIAAERL*
Ga0116217_109024691	3300009700	Peatlands Soil	MSDPDMLTSHDDKACGRDTRGLILRIFVVAFLGMLFWHAVIVA
Ga0116219_100460183	3300009824	Peatlands Soil	MSDPDMLTSHDDKACGRDTRGLILRIFVVAFLGMLFWHAVIVAGRL*
Ga0074046_105252571	3300010339	Bog Forest Soil	MSDPDRLTPHDKQARARDTQGLILRIIVVAFLGVLFWQAIIAAGRP*
Ga0074044_109861091	3300010343	Bog Forest Soil	MSDPDWLTSHDDKAYGRDTRGLILRIVVVAFLGVLFWQAIIAAGRL*
Ga0074044_110598141	3300010343	Bog Forest Soil	MSDPDWLTSRDDKARGRDAQGPILRIIAVAFLAMLFWHAVIAAGRL*
Ga0134125_106347931	3300010371	Terrestrial Soil	MSDPDRLTSHDDQTFGRDTRSLILRILVVARLGVLFWQAFIAAGML*
Ga0126381_1026286171	3300010376	Tropical Forest Soil	MSDPDRLTSHDDKTFRDTQRLILRIAVVACLGMLFWQAIIAAGKL*
Ga0136449_1000794494	3300010379	Peatlands Soil	MRLARWRASEEYRMSDPDMLTSHDDKACGRDTRGLILRIFVVAFLGMLFWHAVIVAGRL*
Ga0136449_1000840639	3300010379	Peatlands Soil	MSDPDMLTSHDDKACGRDTRGLILRIIVVAFLGMLFWHAVIVAGRL*
Ga0136449_1005063682	3300010379	Peatlands Soil	MSDPDWLTSHDDKACVRDTRGLILRIIVVAFLAVLFWHTVIAAGRP*
Ga0136449_1007254632	3300010379	Peatlands Soil	MSDPNRLTSHDDIAHGRETRGLILRIIVVAVLGVLFWQAIIAAGRL*
Ga0136449_1014350622	3300010379	Peatlands Soil	MSDPDWLTSHDDKACGHDTRGLILRIIVVAFLGMLFWHAVIAAGRL*
Ga0136449_1022140301	3300010379	Peatlands Soil	MSDPDWLTSHDDKACGRDTRGLILRIIVVAFLGMLFWHA
Ga0126361_105792561	3300010876	Boreal Forest Soil	MSDPDRLTSHDKTFDRDTRGLILRIIVVAFLAALFWHTVAAAGRL
Ga0137398_109877542	3300012683	Vadose Zone Soil	MSDPDGLTSRDDTASVLDTRGLILRIIVVAFLAALFWHTIIGAVTP*
Ga0137413_101230121	3300012924	Vadose Zone Soil	MSDPDRLTSRDHTASVLETRGLILRIIVVAFLAALFWHTIIGAVTP*
Ga0137419_112328212	3300012925	Vadose Zone Soil	MSDPDRLTSHDDMACGRDTRGLILRIIVVVFLGLLFWQAIIAAGRL*
Ga0137416_114609722	3300012927	Vadose Zone Soil	MSDPDWLTSHDDKILGPDTRGLILRIIVVAFLAVLFWHTVIAAGRL*
Ga0164298_103708292	3300012955	Soil	MSGPDRLISRHDTDSALDKQGLILRITVVACLAALFWHTVLVAALP*
Ga0164298_107058411	3300012955	Soil	MSDPGRLTSHDKTYDRDTRGLILRIVVVAFIGMLFWQAIIAAGML*
Ga0164303_111456571	3300012957	Soil	MSDPDWLTSHDDKAFGRDTRGLILRIFVVACLGVLFWQAIIAAGML*
Ga0164299_106158371	3300012958	Soil	MSDPDRLTSHDDKIFDRDTRGLILRILVVACLGVLFWQAIISAGML*
Ga0164301_103125722	3300012960	Soil	MSDPDRLTSHDDKTFGRDTRGLILRIVVVGFLTVLFWHMVIAAGRL*
Ga0164302_112184061	3300012961	Soil	MSDPDRLTSHADKTFGRDTRVLILRTFVVACLGVLFWQ
Ga0164309_113917962	3300012984	Soil	SRADTASVLDTQGLILRIIVVAFLAALLWHTVIGAGAP*
Ga0164308_118752241	3300012985	Soil	MSDPNGLTSHDDKTFDRDTRGLILRILDIACLGLLFWQAIIAAGML*
Ga0164307_108427571	3300012987	Soil	MSDPDRLTSHDDTASVLDTRGLVLRIIVVAFLAVLFWQAIIAAGML*
Ga0164307_114649222	3300012987	Soil	MSESDLLTSRAAAASVLDTRGLILRIVVVALLAVLFSQTVIAAGRPDDQRYKFD*
Ga0164307_117758141	3300012987	Soil	MSDPDRLTSHADKTFGRDTRVLILRTFVVACLGVLFWQAIIAAGML*
Ga0164305_115310311	3300012989	Soil	MSDPDRLTSHDDKTFVLDTRGLILRIFVVACLGVLFWQAIIAAGML*
Ga0182024_101721033	3300014501	Permafrost	MSDPDRLTSRDHTASVLETRGLVLRIIVVAFLAALFSHTVIAAGTP*
Ga0167644_10076242	3300015206	Glacier Forefield Soil	MSDPDRLSSHDDKTFGRDARGLILRILVVGFLAMLFWHTVIAAGT*
Ga0167644_10384703	3300015206	Glacier Forefield Soil	RLTSRDHTASVLETRGLILRIIVVAFLAALFWHTVIAAGTP*
Ga0187802_101685942	3300017822	Freshwater Sediment	MNDPDWLTSHDDKAYGRDTRGLILRIVVVAFLGVLFWQAIIAAGRL
Ga0187814_102245632	3300017932	Freshwater Sediment	MSDPDWLTSHDDKAYGRDTRGLILRIVVVAFVGVLFWQAIIAAGRL
Ga0187819_106099451	3300017943	Freshwater Sediment	MSDPDWLTSHDDKAYGRDTRGLILRIVVVAFLGVLFWQAIIAAGRL
Ga0187879_103110442	3300017946	Peatland	MSDPDRLTSHDDMARGQDTRGLILRIIVVAVLGVLFWQAIIAAGRL
Ga0210407_100108617	3300020579	Soil	MSDPDRLTSHDKTFDRDTRGLILRIVVVAFLVALFWHTVIAAGML
Ga0210407_100115396	3300020579	Soil	MSDPDRLTSRDHTASVLETRGLILRIIVVAFLAALFWHTVIAAGTP
Ga0210407_100282677	3300020579	Soil	MSDPVRLTSHDYKTSGRDTRGLILRIFVVACLGVLFWQAIIAAGML
Ga0210407_100302483	3300020579	Soil	MSDPDRLTSRDDTASVLDTRGLILRIIVVAFLAALFWHTVIAAALP
Ga0210407_101038473	3300020579	Soil	MSDPDRLTSDDDTAPDTRSLILRIVVVAFIGMLFWQAIIAAGML
Ga0210407_102267223	3300020579	Soil	MSDPDWLTTHDDKTFGRDTRGLILRIVVVGFLTVLFWHMVIAAGRL
Ga0210407_102650281	3300020579	Soil	MSDPDRLTSHDDQTFGLDTRGLILRIIVVVCLGVLFLQAILAAGML
Ga0210407_105464612	3300020579	Soil	MSDPDRLTSSDHKIIGPDTRGLILRIIVVAFLGALFWHTVIGAGTP
Ga0210403_108570532	3300020580	Soil	MSDPDRLTSRDHTATVLETRGLILRIIVVAFLAALFWHTVIAAGTP
Ga0210403_112205742	3300020580	Soil	MSDPDRLTSSDRKIIGPDTRGLILRIIVVAFLGALFWHTVIGAGTP
Ga0210399_108030401	3300020581	Soil	MNDPDRLTSHDDKTFDRDTRALILRIIVVACLGMLFWQAIIAAGSL
Ga0210395_101329022	3300020582	Soil	MSDPERLTSHDDTAHDTRGLILRIVVVVFLGVLFWHAVIAAGRL
Ga0210395_112542942	3300020582	Soil	MSDPDRLTSRDDTASVLDTRGLILRIVVVAFLAALFWHTVIAAGTP
Ga0210401_104922631	3300020583	Soil	MSDPDRLTSREDTASVLKTRGLILRIIVVAFLAALFWHTVNVAGSL
Ga0210401_112366581	3300020583	Soil	LTSSDHRILGPNTRGLILRIFVVAFLGLLFWHTVIVAGTP
Ga0210404_106685142	3300021088	Soil	MNDPDRLTSHNDKIFDPHTRALILRIIVVACLGMLFWQAIIAAGSL
Ga0210406_100115771	3300021168	Soil	MSDPDRLTSRDDTTSVLETRGLILRIIVVAFLDALFWHTVIAAGTP
Ga0210406_100152086	3300021168	Soil	MSDPDRLTSRDETASFLETGGLILRIIVVAFLAALFWHTVIGAGML
Ga0210406_100225012	3300021168	Soil	MSDPDRLSSHDDKTFGRDARGLILRILVVACLGMLFWQAIIAAERL
Ga0210406_108394001	3300021168	Soil	MSDPVRLTSHDKTVGADTRGLILRIVVVAFVAALFWQAIIAAGKM
Ga0210406_112404392	3300021168	Soil	MSDPDRLTSREDTASVLKTRGLILRIIVVAFLAALF
Ga0210408_101394243	3300021178	Soil	MSDPNRLTSRDDKIFDPHTRALILRIIVVACLGMLFWQAIIAAGSL
Ga0210408_102516042	3300021178	Soil	MSDPDRLTSSDHKIFGPDTRGLILRIIVVAFLGALFWHAVIGAGTP
Ga0210408_107051542	3300021178	Soil	MSDPDRLTSRDDTASFLETRGLILRIIMVAFLAALFWHTVIAAALP
Ga0210408_115186031	3300021178	Soil	MNDPDRLTSHDDKTFDRDTRALILRIIVVACLGMLFW
Ga0210396_105955712	3300021180	Soil	MSDPDRLTSRDHTASVLETRGLILRIIVVAFLAALFWHTVIGAGTP
Ga0210388_108728512	3300021181	Soil	MSDPDRLSSHDDKTFGRDARGFILRILVVACLGMLFWQAIIAAERL
Ga0210393_104084063	3300021401	Soil	MSDPDRLTSHDKAFDRDTPGLILLAALFWHTVSPAGML
Ga0210385_105957541	3300021402	Soil	MSDPDRLTSRDDTASVLETRGLVLRIVVVAFLAALFWHTVIGAGTP
Ga0210389_104924322	3300021404	Soil	MSDPDRLTSSDHKIIGPDTRGLILRIIVVAFLGALFWHTVISAGTP
Ga0210389_106331342	3300021404	Soil	MSDPDRLTSRDHTASVLETRGLILRIIVVAFLAALFWHTVIVAGSL
Ga0210389_109311932	3300021404	Soil	SHDDKTFGRDTRGLILRIVVVGFLTMLFWHTVIAAGTP
Ga0210387_113698041	3300021405	Soil	MSDPDRLTSREDTASVLKTRGLILRIIVVAFLAALFWHTVIVAGSLWRPSI
Ga0210387_116578721	3300021405	Soil	MSDPDRLTSHDDKTFGRGTRGLILRIFVVAFLAALFWHTVIAAALP
Ga0210386_104133171	3300021406	Soil	MSDPDRLTSHDKAFGRDTRLLILRIIVVAFLAALFWHTVIAAGLP
Ga0210394_107989763	3300021420	Soil	MSDPDRLTSSDHKIIGPDTRGLILRIIVVAFLGALFWHMVIGAGTP
Ga0210391_105540432	3300021433	Soil	MSDPDRLTSSDHKIFGPDTRGLILRIIVVAFLGALFWHTVIGAGTP
Ga0210390_105330081	3300021474	Soil	MSDPDRLTSHDKAFDRDTPGLILRIIVVAFLAALFWHTVIAAGML
Ga0210392_107769872	3300021475	Soil	MSDPDRLTSSDHKIFGPDTRGLILRIIVVAFLGALFWHMVIGAGTP
Ga0210392_110097921	3300021475	Soil	MNDPDRLTYSDHKIFGPNTRGLILRIIVVACLGVLFWHTIIAAGSP
Ga0210402_113965711	3300021478	Soil	MSDPDRLTSRDLTASVLETRGLILRIIVVAFLAALFWHTVIAAGTP
Ga0210410_100806613	3300021479	Soil	MSDPDRLTSHDKTFGCDTRGLILRIIVVAFLAALFWHTVIGAALP
Ga0210410_108936212	3300021479	Soil	MSDPDRLTSHDDKTFDRDTRGLILRIIVVAFLGALFWHTVIAAGRP
Ga0210410_111898361	3300021479	Soil	MSNPYRPTSRDETASVLETRGLILRIVVVAFLAALFWHTVIAAGLP
Ga0228598_10684472	3300024227	Rhizosphere	MSDPDRLTSHDGKTFDRDTRGLILRIFVVACLGVLFWQAIIAAGML
Ga0228598_10751632	3300024227	Rhizosphere	MSDPDRLTSREDTASVLKTRGLILRIIVVAFLAALFWHTVIVAGSL
Ga0207665_111472092	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSDPDRLTSHDDTASVLDTRGLVLRIIVVAFLAALFWQAIIAAGML
Ga0209648_106201602	3300026551	Grasslands Soil	MSDPDWLTSHDEKASVRDTQGLILRIIVVAFLGVLFWHAIIAAGWP
Ga0179593_10250391	3300026555	Vadose Zone Soil	MSDPDRLTSQDKTFDRDTRGLILRIIVVACLGMLFWQAIIAGGSL
Ga0209732_10585301	3300027117	Forest Soil	MNDPDRLTSSDGTASPLDTQGLILRIIVVAFLAALFWHTVVATALP
Ga0209732_10836451	3300027117	Forest Soil	MSDPDRLTSHDDKTFGRDTRGLILRIFVVAFLAALFWHTVIAAALP
Ga0207948_10421751	3300027174	Forest Soil	TSHNDKIFDPHTRALILRIIVVACLGMLFWQAIIAAGSL
Ga0208241_10466502	3300027297	Forest Soil	MSDPGPADYHDDKTFDRDTRGLILRIIVVACLGVLFWQATIAAGML
Ga0208324_11393931	3300027604	Peatlands Soil	RMSDRDWLTSHDDKACGRDTRGLILRIIVVAFLGVLFWHAVIAAERL
Ga0209330_11137172	3300027619	Forest Soil	MSDPDRLTSRDETASVLETRGLILRIVVVAFLAALFWHTAIAAGLP
Ga0208696_11355452	3300027696	Peatlands Soil	MRLARWRASEEYRMSDPDMLTSHDDKACGRDTRGLILRIFVVAFLGMLFWHAVIVAGRL
Ga0208696_11548112	3300027696	Peatlands Soil	DWLTSHDDKACGRDTRGLILRIIVVAFLGVLFWHAVIAAERL
Ga0209655_103033942	3300027767	Bog Forest Soil	MSDPDRLPSRDKTFGRHTRGLILRIIVVACLGVLFWQAIIAA
Ga0209040_100386794	3300027824	Bog Forest Soil	MSDPDRLTSHDDMARGRDTRGLILRIIVVAFLGVLFWQAIIAAGRL
Ga0209040_102356902	3300027824	Bog Forest Soil	MSDPDWLTSHDDKAYGRDTRGLILRIVVVAFLGVIFWQAIIAAGRL
Ga0209274_104644201	3300027853	Soil	MGDPDRLTSHDDKTFGRDTRGLILRIIAIAFLGVLFWQAV
Ga0209517_103621221	3300027854	Peatlands Soil	PDWLTSHDDKACGRDTRGLILRIIVVAFLGMLFWHAVIAAGRL
Ga0209169_103213981	3300027879	Soil	FRMSDPDRLTSRDDQTFGLDTRGLVFRIIVVAFLAGLFWQAIIAAGML
Ga0209169_105582161	3300027879	Soil	MNDPDRLTSSDGTASPLDTQGLILRIIVVAFLAALFWHTVNVAGSL
Ga0209275_104618611	3300027884	Soil	MSDPDRLTSHDKTFGCDTRGLILRIIVVAFLGMVFWQAILAAGRL
Ga0209380_104573191	3300027889	Soil	MSDPDRLTSHDKTFDRDTRGLILRIIVVALLAALFWHTVIAAALP
Ga0209624_1000056814	3300027895	Forest Soil	MSEPDRLTSRDDTASAIDKQGLILRIIVVAFLAALFWHTVMAAAVP
Ga0209624_105404171	3300027895	Forest Soil	TSHDKTFGRDTRLLILRIIVVVFLAVLFWQAVIAAGRP
Ga0209624_108734601	3300027895	Forest Soil	MSDPDRLTSHDDKIFDRDTRGLILRILVVACLGVLFWQAIIAAGML
Ga0209006_100343067	3300027908	Forest Soil	MSDPDRLTSHDKTFDRDTRGLILRIIVVTLLAVLFWHTVVATGRL
Ga0209006_100519933	3300027908	Forest Soil	MSDPERLTSHDDTAHDTRGPILRIVVVVFLGVLFWHAVIAAGRL
Ga0209006_101645032	3300027908	Forest Soil	MSGPDRLTSLDDKTFGRDTRGLILRTVVVAFLAALFWHTVMTAAVP
Ga0209006_104259571	3300027908	Forest Soil	MSDPDRLTSHDKAFDRGTPGLILRIFVVAFLAALFWHTV
Ga0209006_104486792	3300027908	Forest Soil	DRLTSHDKTFGCDTRGLILRIIVVAFLAALFWHTVIGAALP
Ga0209006_105068391	3300027908	Forest Soil	ATEEFRMSDPDRLTSRDDTASAVEKQGLIIRIVVVALLAALFWHTVVAAALP
Ga0137415_103275423	3300028536	Vadose Zone Soil	MSDPDRLTSHDDMARGRDTRGLILRIIVVVFLGLLFWQAIIAAGRL
Ga0308309_112146982	3300028906	Soil	MSDPHRPTSHDKTFGADTRGLILRIVVVAFIAALFWHTVIAAELP
Ga0316363_101400211	3300030659	Peatlands Soil	MSDRDWLTSHDDKACGRDTRGLILRIIVVAFLGVLFWHAVIAAERL
Ga0316363_101522751	3300030659	Peatlands Soil	MSDPDMLTSHDDKACGRDTRGLILRIFVVAFLGMLFWHAVIVAGRL
Ga0265720_10085532	3300030764	Soil	DPDRLTSHDDRTFGLDTRGLILRIIVVASLAALFWHTVIAAGLP
Ga0265753_11217632	3300030862	Soil	MSDPDRLTSRDDTASVLDTRGLIFRIIVVAFLAALFWHTVIAAGSL
Ga0265740_10324122	3300030940	Soil	MSDPDRLTSHDDKTFGRDTRGLILRIFVVAFLAALFWHTVIAAGRP
Ga0170822_139343141	3300031122	Forest Soil	DRLTSHDKTFGRDTRGLILRIIVVVFLAVLFWQAVIAPGRL
Ga0170820_162069652	3300031446	Forest Soil	MSDPDRLTSSDHKIFGADTRGLILRIIVVAFLGALFWHTVIGAGTP
Ga0170820_178606303	3300031446	Forest Soil	MSDPDRLTSHDDKTFDRDTRGLILRIIVVAVLAALFWHTFIAAGSL
Ga0170819_160244152	3300031469	Forest Soil	DPDRLTSRDETASGLDTRGLILRIIVVACLGVLFWHAIIAAGSP
Ga0170818_1121305291	3300031474	Forest Soil	MSDPNGLTSHDDKTFGRNTQGLILRIIVVACLGMLFWHMVIAAGRP
Ga0310686_1004735207	3300031708	Soil	MSDPDRLTSHDDKTFGRDTRGLFLRIFVVACLGVLFWQAIIAAGML
Ga0310686_1007116716	3300031708	Soil	MSDPDRLTSRADTARDTRGLILRIVVVAFLGVLFWHTVLAAGMP
Ga0307476_100838632	3300031715	Hardwood Forest Soil	MSDPDRLTSRDDETFGLDTRGLILRIIVVAFLAALFWHTVIGAGML
Ga0307476_101185503	3300031715	Hardwood Forest Soil	MSDPDRLTSHSDKIFVRDTRGLILRILVIACLSLVFWQAIIAAGML
Ga0307476_106843152	3300031715	Hardwood Forest Soil	MSDPDRLTSHDDKTFDHDTRGLILRIFVVACLGVLFWQAIIAAGML
Ga0307476_109037892	3300031715	Hardwood Forest Soil	MSDPDRLTSHDDKTFGRDTRALILRIIVVAFFGMLFWQAILAAGML
Ga0307476_111913651	3300031715	Hardwood Forest Soil	MSDPNGLTSHDDKILGPETRGLILRICVVAFLGLLFWHT
Ga0307476_113451161	3300031715	Hardwood Forest Soil	MSDPDRLTSHEYMARGRDTRGLILRIIVVAFLGVLFWQAIIAAGRL
Ga0307474_107439161	3300031718	Hardwood Forest Soil	MSDPDRLTSRDDTASVFETRGLILRIIVVALLAALFWHTVIAAALP
Ga0307474_115530342	3300031718	Hardwood Forest Soil	MSDPDRLTSRGDKTFGLDTRGLIPRIIVVAFLAALFWHTVIG
Ga0307478_102971582	3300031823	Hardwood Forest Soil	MNDPDRLTSHNDKIFDPHARALILRIIVVACLGMLFWQAIIAAGSL
Ga0307478_105193772	3300031823	Hardwood Forest Soil	MSDPDRLTSRSDIAPALDKQGLILRIIVVAFLAALFWHTVVATALP
Ga0307478_115758591	3300031823	Hardwood Forest Soil	MSDPDRLTSRDHAASVLETRGLILRIIVVALLAALFWHTVIAAALP
Ga0307478_115853212	3300031823	Hardwood Forest Soil	MSDPDRLTSHDDKTFDRDTRGLILRIFVVACLGVLVWQMVIAAGKL
Ga0306923_118612852	3300031910	Soil	MSDPDRLTSHHEKTLGGTRGLILRIIVVACLGVLFWQAILAAGRL
Ga0306921_103004212	3300031912	Soil	MSDPDRLTSHHEKTLGRDTRGLILRIIVVACLGVLFWQAILAAGRL
Ga0310912_104761642	3300031941	Soil	MSDPDWLTSHDKKTLGRDTRGLVLRIIAVACLGVLFWQAILAAGRL
Ga0306926_117244172	3300031954	Soil	MSDPDRLTSQDEKTLGRATRGLILRIIVVACLGVLFWQAILA
Ga0311301_103283195	3300032160	Peatlands Soil	MSDPDMLTSHDDKACGRDTRGLILRIIVVAFLGMLFWHAVIVAGRL
Ga0311301_104584263	3300032160	Peatlands Soil	MSDPDWLTSHDDKACVRDTRGLILRIIVVAFLAVLFWHTVIAAGRP
Ga0311301_108746992	3300032160	Peatlands Soil	MSDPDWLTSHDDKACGHDTRGLILRIIVVAFLGMLFWHAVIAAGRL
Ga0326728_102131912	3300033402	Peat Soil	MSDPDWLTSHDDKARSRDTLGLILRIFVVAFLGALFWQAVIAAARP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F031202

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences