NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F029946

Metagenome Family F029946

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F029946
Family Type Metagenome
Number of Sequences 186
Average Sequence Length 54 residues
Representative Sequence MEGWLNMTKSIGDDVFVPMATTRESADDTEGEPGSCRSACGGVPVCHGRIVLCFP
Number of Associated Samples 4
Number of Associated Scaffolds 186

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 66.67 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 4
AlphaFold2 3D model prediction Yes
3D model pTM-score0.14

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (98.387 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Roots → Unclassified → Unclassified → Root
(96.774 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(100.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.14
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 186 Family Scaffolds
PF10536PMD 3.23
PF00665rve 2.15
PF00078RVT_1 2.15
PF04195Transposase_28 1.61
PF03732Retrotrans_gag 1.08
PF00385Chromo 0.54
PF13966zf-RVT 0.54
PF00098zf-CCHC 0.54

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 186 Family Scaffolds
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 2.15
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 2.15
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 2.15
COG4584TransposaseMobilome: prophages, transposons [X] 2.15


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A98.39 %
All OrganismsrootAll Organisms1.61 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300014486|Ga0182004_10009321All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor7941Open in IMG/M
3300014486|Ga0182004_10040757All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor2944Open in IMG/M
3300014486|Ga0182004_10046146All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor2639Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
RootHost-Associated → Plants → Roots → Unclassified → Unclassified → Root96.77%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere3.23%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300014486Endophyte microbial communities from Sorghum bicolor roots, Mead, Nebraska, USA - 072115-40_1 MetaGHost-AssociatedOpen in IMG/M
3300015261Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaGHost-AssociatedOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M
3300015265Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaGHost-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0182004_1000034413300014486RootLPIEGRVNMAKSIRDDVSVPIATTRESADDMGEESGSCRSIYGRVPVCHGGDSFMFSLVV
Ga0182004_10001132213300014486RootMEELLNVTKSIGVDVSVQMAATRESADDTEGESGSCRSASGDVLVCYVRIVLRFP*
Ga0182004_10002085103300014486RootMEGWLNVTKSVVDDVPVPMAATRESADDIGGEPGICRSGCRGVPVCPGGIILIFSLVI*
Ga0182004_1000808873300014486RootMEEGLNVTESIDDDMSVPMAMIREFADDMEGECGSCRSVCRGVPVCHGE*
Ga0182004_1000855013300014486RootMEGWLNMTKSIGDDVFVPMATTRESADDAEEESGGCRSACGGVPVCHGRIVLCFP*
Ga0182004_10009321113300014486RootMEGWLNVTKSIGDDVFVPMAMTKESADDTEGERGSCRSACGDVLVCHVRMVLCFP*
Ga0182004_10009949113300014486RootVTKSIGDGVFVLMAMTEESADDTEGKSRSCRSVYGDVLVCHVRIVLRFP*
Ga0182004_1001098213300014486RootMEELLNMTKSIGVDVSVQMATTRESVDDTEGESGSCRSASGDVLVCYMRIVLRFP*
Ga0182004_10011940113300014486RootMEGWLNMTKSIGDDVFVPMATTRESADDTEGEPGSCRSACGGVPVCHGRIVLCFP*
Ga0182004_1001370323300014486RootVTKSIGDDVFVPMTMTREPADDTEGEPRSCRSACGGVLVCHVRIVLHFA*
Ga0182004_1001473383300014486RootMTKSVGDDVFVLMATTRESADDAEEGPKGCRSACGGVLVCQGKIVLCFP*
Ga0182004_1001697293300014486RootMTKSIGGDVFVPMATIRGSTDDAEGPGGCRSACVSAFGGVPVCYGKIVLCFP*
Ga0182004_1001724183300014486RootMEGRLNMTKSIGDDVFVPMATTRKSTDDAEEEPKGCRSVCGGIPVGHRRIVLCFP*
Ga0182004_1001724633300014486RootMTKSIGGDVFVPIATTRESADDTEGEPGSCRSACGGVPVCHGRIVLCFP*
Ga0182004_1001906273300014486RootMEGWLSVTKSLGDDLVVPMVMTRESADDAEEEPRSCRSAPGGVLVCHGRIVLRFP*
Ga0182004_10022790103300014486RootMTKSIGGDVFVPMATMRGSADDAEGGPRGRRLAGGSAFGGVPVCHGKIVLCFL*
Ga0182004_1002423243300014486RootMEGWLNVTKSIGDDVFVPMAMTRESADDTEAEPGSCRSACGGVLVCHVRIALRFP*
Ga0182004_1002608823300014486RootMEGWLNVTKCIGDDVFVLMAMIKESADDTEGEPGSCRSACGGVLVCHVRMVSCFP*
Ga0182004_1002890343300014486RootMEGRLDVTKSIGDDVFVPMATTRESADDAEEEPEGCRSACGGVPVCHGRIVLCFP*
Ga0182004_1003178973300014486RootMEGWLNVTKSIGDDVFVPMAMTKESADDTEGEPGSCRSASGDVLICHVRIVLCFP*
Ga0182004_1003251033300014486RootMTKSIGGDVFVPMATIRGPADDAEEGPGGCRLACGSAFGGIPVCYGKIVLCFP*
Ga0182004_1003415463300014486RootMEGLLNMTKSIGDDVFVLMATTRASADDAEEEPKGCRSVCGGVPVGHGRIVLCFP*
Ga0182004_1003436313300014486RootMEGWLNMTKSIGGDVFVPMATTRESTDDTGGEPGSCRSACGGVPVCHGRIVLCLP*
Ga0182004_1003794513300014486RootMEGRLNVTKSIGGDVSVLMATTREAADDAEEEPEGCRSACGGVPVCHGRIVLCFP*
Ga0182004_1003965623300014486RootMTKSIGDDVFVPMATIRGSADDAEEGHGGCRLACGSAFGGVPVCHEKIVLCFP*
Ga0182004_1004075763300014486RootVTRSIGDDVFVPMVMTKESADDTKGEPGSCRSAGGDVLACHVRMVLRFP*
Ga0182004_1004360723300014486RootMEGRLDVTKSIGNDVFVLMAITRESADNAEEEPGGCRTACGGVPVCYGRIVLCFP*
Ga0182004_1004614613300014486RootMEGWLNVTKSIGDDLSVPMATTRESVDDMGEESRSCRSICGGVPVCHEGIALCFP*
Ga0182004_1005009213300014486RootMEEWLNETKSIGDDVFVPIATTREFADEIEGESGSCRSVCGGVPVCHGEIVL*
Ga0182004_1005113353300014486RootVTKSIGDNVFVPMAMTKESADDTEGEPGSCRSAGGDVVSCHVRMVLCFC*
Ga0182004_1005435823300014486RootMEGWLNVTKSIGGDAFVSMAITRKSADDTEGEPGSCRSACGAVLVCHVRIVLRFP*
Ga0182004_1005491313300014486RootMKGRPNMTKSIGGDVFVPIAMIRGSADDAEEGPGGCRLACGSAFGGVPDCHGKIVLCFP*
Ga0182004_1005515813300014486RootMEGWLNVTKSIDGDAFVPMAMTRKSADDTEGEPRSCRSACGGVLVCHVRIVLRFP*
Ga0182004_1005822423300014486RootMEGWLNVTKSIGGDAFVPMAMTRKSANDTEGEPRSCRLACGGVLVCHVRIVLHFP*
Ga0182004_1005914233300014486RootVTKSIGNDVFVPMATTRQSADDAGEGLGSYRSACGGVPVCHGRMFLCFL*
Ga0182004_1005978713300014486RootMEGRLNVTKSIGDNVFVPMATTREFADDAEEEPEGCRSACGGVPVCHGRIVLCFP*
Ga0182004_1006015223300014486RootMEGWLNVTKSVVDDVPVPMAAIRESADDIGGEPGSCRSGCRGVPVCQGGIILIFSLVI*
Ga0182004_1006040713300014486RootMEGWLNVTKSTGDDVFVPMAMTKESADDTEGEPGSCRSACGDVLVCHVRIVLRFP*
Ga0182004_1006082113300014486RootMEGRLNMNMSISDDVFVSMAITGESADDAEEEPEGCRSVCGGVPVCHESIVLCFP*
Ga0182004_1006174633300014486RootMEEGSNVIKPTDDDVSVLMAMIRESADDMGGEPGGCRSVCGGVSVWHGGIVLCFP*
Ga0182004_1006891323300014486RootMEGWLNVTKSMGDDVFVPMAMIRESADDTEGEPRSCRSAYGSVLVCHMRIVLRFP*
Ga0182004_1007275813300014486RootVTKSIGDDVFVPMAMTREPADDMEGEPGSCRSACGGVLVCHVRIVLCFP*
Ga0182004_1007321213300014486RootMEELLNVTKSIGVEVSVPMAATRESADDTEGESGSCRSASGDVLVCYVRRVLHFS*
Ga0182004_1007327323300014486RootMTKSISDDVFVPMAATGESADDAEEGPKGCRSACGGVPDCHRRTVLCFP*
Ga0182004_1007349813300014486RootVTKSIGDDVSVPMVMTKECADDTEGEPGSCRSACGDVLVCHVRMVLHFP*
Ga0182004_1007411023300014486RootMEGRLNVAKSIGDDVFMPMATTGESADDEEEEPEGCRSACGGFPVCHGRIVLCFP*
Ga0182004_1007552813300014486RootMEGWLNMTKSIGDDMFVPMAMTGESADDTEGEPGSCRSVCGGVLVCHVRIVLRFP*
Ga0182004_1007566613300014486RootMEGWLSATKSIGDDVLVPMAMTKESADDTEEELGSCRSPGGDVLVCHVRMVLRFP*
Ga0182004_1007777723300014486RootMEGWLNVTKSIGDDVFMPMATTRQSADDVGEEFGSCRSACGGVLVCQGGDSFMFSLVI*
Ga0182004_1008053043300014486RootVTKSIGDDVFVPMAITQESVDGTEGESGSCRSVGGDVLVCHVRIALRFP*
Ga0182004_1008088513300014486RootMEEWLNVTKSIGDDVFVPMATTRESADDVEGEYGSCRSVCGGVLVCHGGIVLCFP*
Ga0182004_1008118323300014486RootVTKSTGDDVSVPMAMTRESADDMEGESERSRSVCRGVPVCHGGVVLCFP*
Ga0182004_1008188813300014486RootMEGRLNMTKSIGDDVFVSMATTRESADDAEEEPKGCRSACGGVPVCHERIVLCFP*
Ga0182004_1008331733300014486RootMEGRLNMTKSIGDDVFVPMAITGESADDAEDEPEGCRSVCGGVPVCHESIVLCFP*
Ga0182004_1008431623300014486RootMEEQLNMTKSIGDDVFVPMATTRESADDAEKEPKGCRSACGGVPVCHGKIVLCFP*
Ga0182004_1008491013300014486RootMEGRLDMTKSISDDVFVPMAATGESANDAEERPKGCRSTCGGVPVCHGRIVLCFP*
Ga0182004_1008682113300014486RootVTRSIGDDVFVPMVMTKESADDTEGEPGSCRSAGGDVLVCHVRMVLRFP*
Ga0182004_1009091623300014486RootMEEGLNVTKFIGGDVSVPMATTREFADDIERESGSCRSVCGGVPVCHGGIVLCFP*
Ga0182004_1009519913300014486RootLPTEGRLNMTKSIGDDVFVPMTTTGESANDTEEEPKGCRSACGDVLVCHGRIVLCFP*
Ga0182004_1009640213300014486RootMEEWLNVTKSIGDDVFVPMATTRETADDMEGESGSCRSVCGGVPVCHGGIVLCFP*
Ga0182004_1009834513300014486RootMEGWLNVTKSIGDDVSVPMATTRESADDMGEESGSYRSVCGGVPVCHGGIVLCFP*
Ga0182004_1010038013300014486RootVTKSIGDDVFVPMAMTEESADDTEGEPRSCQSAYGDVLVCHVRIVLRFP*
Ga0182004_1010085213300014486RootMEELLNVTKSIGVDVSVPMATTRESADDTEGESGSCRSASGDVLVCYVRIVLCFP*
Ga0182004_1010187413300014486RootMEGWLNVTKSIGDDVFVPMAMTRESADDTEGEPGSCRSACGRVLVCHVRIALRFP*
Ga0182004_1010549013300014486RootMEGRLNMAKSTGDDVFVPMAITGESADDAEEESKGCRSACAGVPVCHGRIVLCFP*
Ga0182004_1010689013300014486RootMEGWLNVTKSIGDDVPVPMAATRESADDIGEESGSCRSVCGGVPVCHGGIILYFP*
Ga0182004_1010753523300014486RootMEGRLNMTKSIGDDVFVPMTTTGESADDAEGEPKGCRSACGGVPVCHGRIVLCFP*
Ga0182004_1010823413300014486RootVTKSIGDDVFVPKAMTEESTDDTGEEPGSCRLACGGVLVCHGRMVLRFP*
Ga0182004_1010941733300014486RootMTKSIGADVFVLIATIRGSADDAEEGPGGCRLACGSAFGGVPDCHGKIVLCFP*
Ga0182004_1011039013300014486RootMEGWFNVTKSIGDDVFVPMATTRESADDAEEEPGGCRSACGGVPVCHGRIVLYFP*
Ga0182004_1011066113300014486RootVTKSIGDDVSVPMAMTRESADDMEGESESCRSVCGGVPVCHGGVVLCFP*
Ga0182004_1011148913300014486RootMEGWLNVTKSIDGDAFVPMAMTRKSAEPGSCRSACGGVLVCHVRIVLRFP*
Ga0182004_1011159213300014486RootMEGWLNVTKSIGDDVFVPMAMTRESADDTEEEPGSCRSACGGVLVCY
Ga0182004_1011252313300014486RootMEGWLNVTKSIGGDAFVPMAIIRKSADDTEGEPGSCRTACGGVLVCHVRIVLRFP*
Ga0182004_1011305613300014486RootVTKSIGDDVLVPMAMTKESADDTEGESGSCRSASGDVLVCHVRMVLRFP*
Ga0182004_1011328213300014486RootMEGWPNVTKSIGDDVFVPMATTRESADDTEGEPGSCRSACGGVPVCHGRIVLCFP*
Ga0182004_1011440723300014486RootMEGWLNVTKSIGNDVFVPMATTRQSADDAGEEFGSCRSACGGVPVCHAGIVLCFP*
Ga0182004_1011457823300014486RootMKELLNVTKSIGVDVSMPMATTRESADDTEGESGSYRSASGDVLVCYVRIVLRFP*
Ga0182004_1011740813300014486RootMEGWLNVTKSIGGDAFVPMAITRKSADDTEGELGSCRSACGGVLVCHVRIVLRFP*
Ga0182004_1011797623300014486RootMKGWLNVTKSIGGDAFVPMAITRKSADDTEGEPGSCRSACGGVLVCHLRIVLRFP*
Ga0182004_1011894223300014486RootMEEGLNVTKFIGGDVSVPMATTREFSDDMERESGSCRSVCGGVPFCHGGIVLRFP*
Ga0182004_1011911013300014486RootMEGRLNMTKSIGDDVFVPIAITRESADDAEKEPKGCRSACGVVPVCHGRIVLCFP*
Ga0182004_1012118013300014486RootMEVWLNVTESIGDDVFVPMAMTRESADDTEGEPGSCRSACGGVLICHVRIVLRFP*
Ga0182004_1012315623300014486RootMEGRLNVTKSIDDDVFVPMATTRESADDAEEEPGGCRSACGGVPVCHGRIVLYFP*
Ga0182004_1012546013300014486RootVTKSIGDDVFVPMAMTKESAGDTEGEPGNCRSAGGDVLVCHVRMVLCFP*
Ga0182004_1012568513300014486RootMGGWLNMTKSIGDDVFVPMAITRESADDTEGESGSCRSTCRGVLVCHVRIVLRFP*
Ga0182004_1012690413300014486RootMERWLNVTKSIGDDMSVPMATIRESADDMGEESGSCRSVCGGVPVCHGGIALCFP*
Ga0182004_1012789413300014486RootVTKSIGGDVFVPMAMTKESADDTEGEPGSCRSASGDVLVCHVRMVLRFP*
Ga0182004_1012867533300014486RootMEGRLNVTKSIGDDVFVTMATTREYADDAEEEPGGCRSACGGVPVCHGRIVLYFP*
Ga0182004_1012962523300014486RootMEGRLNMTKSIGDDVFVPIATTGESADGEEEGLNGCRSACGGVPVCHGRIVLCFP*
Ga0182004_1013060113300014486RootMEGWLNVTKSIGDDVFVPMATTRESADDMEGDPRSCRSAYGGVPV*
Ga0182004_1013569113300014486RootMEEWLNVTKSIGDDVFVPMATTRESTDDMEGESRSCRSVCGGVPVCHGG*
Ga0182004_1013698223300014486RootMVGRLDMTKFVGDDLFVLMATTGESADDLEEGPKGCRSACGGVLVCHGRIVLCFP*
Ga0182004_1013779413300014486RootMEEWLNVTKSIGDDVFVPMATTRESADDMEGESRSCRSVYGGVPVCHGGIVLCFP*
Ga0182004_1014127823300014486RootMEEGSNVIKPMDDDVSVPMAMIRESADDMGGEPGGCRSVCGGVPVWHGGIVLCFS*
Ga0182004_1014233813300014486RootMEGWLKVTKSIGDDVFVPMAMTEESADDTEGESGSCRSAYGDVLVCHVRIVLRFP*
Ga0182004_1014311013300014486RootMEGWLNVTKSIGGDVFVPMAITRKSADDTEGEPGSCRSACGGVLVCHVRIVLRFP*
Ga0182004_1014562213300014486RootMEEGLNVTKSIGDDVSVPMAMTRESADDMEGESGSCRSVCGGVPVCHGGVVLCFP*
Ga0182004_1014613913300014486RootMTKSISDDVFVPMATIKGSADDAEEGHGGCRLACGLAFGGVPVCHEKIVLCFP*
Ga0182004_1014711933300014486RootMTRSIGDNVFVSMATIRGSADDAEEGHGGCRLACGLAFGDVLVCHEKIVLCFP*
Ga0182004_1014749013300014486RootMEGWLNVTKSIGGDAFVPMAMTRKSADDTKGEPGSCRSACRGVLVCHVRIVLRFP*
Ga0182004_1014994013300014486RootMEGRLNMSKSIGDDVYVPIATTRESADDMGEESGSCRSVCGRVPVCHGGIALCFP*
Ga0182004_1015040413300014486RootMEGRLNVTKSIGDDVFVPMATTRESADNAEEEPGGCRSACGGVPVCHGRIVLCFP*
Ga0182004_1015053513300014486RootMTKSIGDDVFVPMAMTKESADDTEGEPGSCRSAGGDVLICHMRIVLCFP*
Ga0182004_1015310913300014486RootMEGRLNMTKSIGDDVFVPMATTGESANDAEEGPKGCRSPCGDVPVYHGRIVLCFP*
Ga0182004_1015350413300014486RootMEGRLNVTKSIGDDVFVPMATTREFADDVEEEPEGCRSACGGVPVCHRRIVLCFP*
Ga0182004_1015927813300014486RootMTKSIGDDVFVPMAMTKESADDTEGEPGNCRSAGGGILVCHVRMVLRFP*
Ga0182004_1016198513300014486RootMEGLLSVTKSVGDDVSVPMAMARESADDIEGKSGSCRSVCGGVPVCQGGIVLCFP*
Ga0182004_1016398713300014486RootMEGRLNMTKSIGDDVFVLMATTRESADDTEEEPKGCRSACGGVPVCHERIVLCFP*
Ga0182004_1016411013300014486RootVTKSVGDDVFVLMAMTRESADDTEGEPGSCRSTCGGVLVCHVRIVLRFP*
Ga0182004_1016554223300014486RootKSMGDDVFVPMAMMRESADDTEGEPGSCRSAYGGVLVCHMTIVLRFP*
Ga0182004_1016764213300014486RootMEGQLNMTKSTGDDVFVPMAITGESADDAEEEPKGCRSACGGVPVCHERIVLCFP*
Ga0182004_1016871213300014486RootMEGWLNVTKSIGDDVFVPMAMTRESADDTEGEPESCRSACGGVLVCHVRMVLRFP*
Ga0182004_1017008713300014486RootMEGWLNVTKSIGDDAFVPMAMTRKSADDTEGEPGSCRSACGGVLVCHVRIVLRFP*
Ga0182004_1017169223300014486RootVRDLQGELPMEGWLNVTKSIGDDVFVPMAMTKESADDTEGEPGSCRSACGDVLVCHVGIVLRFP*
Ga0182004_1017245713300014486RootMEGWLNVTKSIGGDAFVPMAMTKKSADDTEGERGSCRSTCGDVLVCHVRIVLRFS*
Ga0182004_1017393313300014486RootMEGLLNMTKSIGGDVSVPMATTRESADNMEEESGSCRSACGGVSVCHGGIVLCFP*
Ga0182004_1017551923300014486RootMEGWLNMTKSMGDDVFVPMAMTRESADDTEGEPGSCRSAYGGVLVCHVRIVLRFP*
Ga0182004_1018560013300014486RootMEGWLNVTKSMGDDVFVPMAMTRESADDTEGEPRSCRSAYGGVLVCHVRIVLCFP*
Ga0182004_1018564513300014486RootMEGWLNVTKSIDGDAFVPMAMTRKSDDDTEGEPGSCRSACGGVLVCHVRIVLRFP*
Ga0182004_1018753013300014486RootVTKSLGDDVFVPMVMTGESADDAEEEPRSCRSAPRGVLICHGRIVLRFS*
Ga0182004_1018912313300014486RootMEGWLNVTKSIGGDSFVPMAMTRKSTDDTEGEPGSCRLACGGVLVCHVRIVLRFP*
Ga0182004_1019001313300014486RootMEGLLSVTKSVGDDVSVPMAMARESADDIEGESGSCRSVCGGVPVCHGGIVLCFP*
Ga0182004_1019020913300014486RootMEGRLNMTKSIGDDVFVPMATTGESADDADEGPKGCRSACGGVLVCHGRIVLCFP*
Ga0182004_1019158013300014486RootMEGRLNMTKSIGDDVFVPMTTTGESADDAEEEPKGCRSACGGVPVCHKRIVLCFP*
Ga0182004_1019159513300014486RootVTKSIGDDVFVPMAMTRESADDTEGEPGSCRSACGGVLVCHMRIVLRFP*
Ga0182004_1019166223300014486RootMTKSIGDDVFVPMATIRGSADDVEEGYGGCRLACGSAFGGVPVCHEKIVLCFPELVK
Ga0182004_1019278913300014486RootMRMVVDGGTAEHDKSIGDDTFVPMATTRESADDTEKEPKGCRSACGGVPVCHGKIVLCFP
Ga0182004_1019339913300014486RootMMEGWLNVTKSIGDDVFMPMAMTRESADDTEGEPGSCRSACGGALVCHVRMVLRFP*
Ga0182004_1019645113300014486RootMEGWLSATKSIGDDVLVPMAMTKESADDTEEELGSCRSAGGDVLVCHVRMVLRFP*
Ga0182004_1019797113300014486RootMEGRLNMTKSIGDDVFVPMATTGESAEDAEEEPKGCRSACGGVPVCHGRIVLCFP*
Ga0182004_1019891313300014486RootMERWLSVTKSLGDDAFVPMVMTRESADDAEEEPRSCRSAPGGVLVCHGRIVLRFP*
Ga0182004_1019899813300014486RootMEGRLNMTKSIGDDVFVPMTTTGESADDAEEEPKGCRSACGGVPVCHGRIVLCFP*
Ga0182004_1019970813300014486RootMEGRLNVTKSIGADVSVPMATTRESADDAEEEPEGCRSACGGVPVCHGRIVLCFP*
Ga0182004_1020274213300014486RootMEEWLDVTKSIGDDVSVPMAMIRESADDMGEESGSCRSVCGGVPVCHGGIALCFP*
Ga0182004_1020644523300014486RootVTKSIGDDVFVPMTTIKGSTDDAEEGHGGCRLACGSVFGGVLVCHERIVLCFP*
Ga0182004_1020717413300014486RootMEGWTNVIKSISGDMSVPMATTRKSADDLEGEPGGCRSVCGVVRVRHGRIVLYFP*
Ga0182004_1020853023300014486RootMEGRLNVTKSIGDDVFVPMATTRESAHNAEEEPGGCRSACGGVPVCHGRIVLYFP*
Ga0182004_1020976013300014486RootMQGRLSMTKSIGDDVFVPMATTRESTDDTEEEPKGCRSACGGVPVCHGRIVLCFP*
Ga0182004_1021030913300014486RootVTKSIGDDVFVPMAMTKESADDTEGEPGSCRSACGDVLVCHVRMVLRFP*
Ga0182004_1021084713300014486RootLPMEGWLNMTKSTGDDVSVPMATTRESADDMGEESGSCRSVCGGVPVCHGGIALCFP*
Ga0182004_1021203713300014486RootMEGWLNMTKSIGDDVFVPMAMTRESADDTEEEPGSCRSACGGVLVCY
Ga0182004_1021268613300014486RootVTKSVGDDVSAPMATTRESADDMEGESGSCRSVCGGVPVCHGGIVLCFP*
Ga0182004_1021271113300014486RootMEGWLNMTKSIGDDVFVPMAMTRESADDTEEEPGSCRSACGGVLVCYVRI
Ga0182004_1021473913300014486RootMEVWRNVTESIGDDVLVPMAMIRESADDTEGEPGSCRSACGGVLVCHVRIVLRFP*
Ga0182004_1021565613300014486RootVTKSIGDDVSVLMAMTRESADDMEGESGSCRSVCGGVPVCHGGVVLCFP*
Ga0182004_1021600013300014486RootMEGRLNMTKSIGDDVFVPIATTGESADGAEKGLNGCRSACGGVPVCHGRIVLCFP*
Ga0182004_1021699723300014486RootMEVWLNVTKSIGGDVFVPIATTRESTDDMEGESGSCRSVCGGVPFCHGGIVLCFP*
Ga0182004_1022083713300014486RootMEGRLNMAKSIGDDVSVPIATTRESVDDMGEESGSCRSVCGRVPVCHGGIALCFP*
Ga0182004_1022086013300014486RootVTKSIGDDVFVSMAMTKESADDTEGEPGSCRSACGDVLVCHVRMVLGFP*
Ga0182004_1022373913300014486RootMEGWLNVTKSIGDDVFVPMAMTKESADDTEGEPGSCRSACGGVLVCHVRMVLRFP*
Ga0182004_1022688113300014486RootVTKSIGDDVFVPMAMTTESADDTEGKPGSCRSACGGVLVCQGGVVLCFP*
Ga0182004_1022694513300014486RootMEGRLNMTKSIGDDVFVPMTTRGESADDAEEEPKGFRSACGGVPVCHGRIVLCFP*
Ga0182004_1022866413300014486RootMEGWLNMTKSIGDDVFVPMATTRESADDAEEEPRGCRSACGGVPVCHRRIVLCFP*
Ga0182004_1023084613300014486RootMKGWLNVTKPIGGDAFVPMAITRKSADDTEGEPGSCRSSCGGVLVCHVRIVLCFP*
Ga0182004_1023234013300014486RootMEGWLNVTKSIGDDVFVPMAMTRESADDTEEEPRSCRSACGGVLVCCVRIVLCFS*
Ga0182004_1023507923300014486RootMEGRLNVTKSIGDDVFVPMATTGESADNEEEETEGCRSACGGVPVCHERVVLRFP*
Ga0182004_1023964113300014486RootMEGWLNVTKSIDDDVSVPMATTGESVDDMGEESGSCRSVCGDVPVCHVRIVLRFP*
Ga0182004_1023970213300014486RootMEGRLNVANSIGDDVFMPMATTGESADDEEEEPEGCRSACGGVPVCHGRIVLCFP*
Ga0182004_1024428613300014486RootMEGRLNMTKSIGDDVFVPMTTTGESTDDAKEEPKGCRSACGGVPVYHGRIVLYFP*
Ga0182004_1024574613300014486RootMEGWLNVTKSMGDDVFVPMAMIRESADDTKGEPGSCRSAYGGVLVCHMRIVLRFP*
Ga0182004_1024619513300014486RootMEGWLNVTKSIDDDVSVPMATTGESADDMGEESRSCRSVCGDVPVCHVRIVLRFP*
Ga0182004_1025416713300014486RootVTKSIGDDVFVPMATTRESADDMEGESGSCRLVCGGVPVCHGGIVLCFP*
Ga0182004_1025423713300014486RootMTKFIGGGVFVPMATIRRYADDAEGEPEGCRLIGRGVLVCRDRIVLCFP*
Ga0182004_1025781113300014486RootMEGWLNVTKSMGDDVFVSMAMTRESADDTEGEPRSCRSAYGGVLVCHVRIVLHFP*
Ga0182004_1025917413300014486RootMEELLNVTKSIGVDVSVPMATTRESADDTEGESGSCRSASGDVLVCYVRIVLRFP*
Ga0182004_1026199713300014486RootMGELLNVTKSIGDDVSVPMAATRESADDMEGEFGSCRSVCGGVPVCHGGIVLCFP*
Ga0182004_1026436213300014486RootMEGWLNVTKSMGDDVFVPMAMTRESADDTEGEPGSCQSACGSVLVCHMRIVLRFP*
Ga0182004_1026610213300014486RootWLPMEGWLNVTKSIGDDVFVPMAMTEESADDTEGESGSCRSAYGDVLV*
Ga0182004_1027330913300014486RootGDDAFVPMVVIRESADDAEEEPRSCRSVPGGVLVCHGRIVLYFP*
Ga0182004_1027525413300014486RootMEGWLNVTKSIGDDVFVPMAMTRESTDDTEGEPRSCRSACVGVLVCHVRMVLRFP*
Ga0182004_1027533213300014486RootMEGWLNVTKSMGDDVFVPMAMTRESADDTKGEPGSCRSAYGGVLVCHVRIVLRFP*
Ga0182004_1027591613300014486RootMEGWLNVTKSIGDDVFVPMAMTRESTDDTEGEPRSCRSACGGVLVCHVRMVLRFP*
Ga0182004_1027847613300014486RootVTKSIGDDVFVPMAMTRESADDTEGEPGSCRSACGGVLVCHVRIVLRFP*
Ga0182004_1028159413300014486RootMEGRLNMTKSIGDDVFVLMTTTGESADDAEEEPKGCRSACGGVPVCHGRIVLCFP*
Ga0182004_1028441813300014486RootMEGRLNMTKSIGDDVFVPMTTTGESANDAEEEPKGCRSACGDVLVCHGRIVLCFP*
Ga0182004_1028467513300014486RootVTKSLGDDVFVLMVMTRESADDAEEEPRSCRSAPGGVLVCHGRIVLHFS*
Ga0182004_1028467713300014486RootGWLPMEEWLNVTKSIGDDVFVPMATTRESADDMEGESGSCRSVCGGVPVCHGGIVLCFP*
Ga0182004_1029245313300014486RootMEEWLNVTKSIGDDVFVPMATTRESADDMERESGSCRSVCGGVPVCHRGIVLCFP*
Ga0182004_1030154513300014486RootGDDAFVPMVVIRESADDAEEEPRSCRSVPGGVLVCHGRIVLRFP*
Ga0182006_124909913300015261RhizosphereKERLNVTKFTGDGVFMPMIMARESADDTKGESGSCRSVCGRISVRHGG*
Ga0182007_1008599733300015262RhizosphereVTKSLGDDVFVPMVMTRESADDAEEEPRSCRSAPGGVLVCHGRIVLRFP*
Ga0182007_1022723113300015262RhizosphereVTKSIGDDVSVPMAMTRESADDVEGESESCRLVCGGVLVCHGGVVLCFP*
Ga0182007_1031637723300015262RhizosphereMEKGLNVTESISGDVSVPMATTRESADDIKGEPRGCRSVCGVVRVCHGRIILCFLSY*
Ga0182005_116448013300015265RhizosphereMEGLLNMTKSIGGDVSVPMATTRESADDMEEESGNCRSACGGVSVCHGGIVLCFP*
Ga0182005_118606013300015265RhizosphereMEGRLNMTKSIGDDVFVPMATTRESADDAEEEPKGCRSACGGVPVCHGRIVLCFP*


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.