NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F029253

Metagenome / Metatranscriptome Family F029253

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F029253
Family Type Metagenome / Metatranscriptome
Number of Sequences 189
Average Sequence Length 70 residues
Representative Sequence MKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASEAIREIAWESDRQFAGTRD
Number of Associated Samples 156
Number of Associated Scaffolds 189

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 69.15 %
% of genes near scaffold ends (potentially truncated) 25.93 %
% of genes from short scaffolds (< 2000 bps) 86.77 %
Associated GOLD sequencing projects 145
AlphaFold2 3D model prediction Yes
3D model pTM-score0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.471 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(25.926 % of family members)
Environment Ontology (ENVO) Unclassified
(33.333 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(45.503 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 34.34%    β-sheet: 8.08%    Coil/Unstructured: 57.58%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.29
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 189 Family Scaffolds
PF00011HSP20 56.61
PF12833HTH_18 26.98
PF00487FA_desaturase 1.59
PF01066CDP-OH_P_transf 1.59
PF03737RraA-like 1.06
PF00398RrnaAD 0.53
PF00072Response_reg 0.53
PF02811PHP 0.53
PF02566OsmC 0.53
PF13188PAS_8 0.53
PF10114PocR 0.53
PF12728HTH_17 0.53
PF01148CTP_transf_1 0.53
PF05974DUF892 0.53

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 189 Family Scaffolds
COG0071Small heat shock protein IbpA, HSP20 familyPosttranslational modification, protein turnover, chaperones [O] 56.61
COG0558Phosphatidylglycerophosphate synthaseLipid transport and metabolism [I] 1.59
COG1183Phosphatidylserine synthaseLipid transport and metabolism [I] 1.59
COG1398Fatty-acid desaturaseLipid transport and metabolism [I] 1.59
COG3239Fatty acid desaturaseLipid transport and metabolism [I] 1.59
COG5050sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferasesLipid transport and metabolism [I] 1.59
COG0684RNA degradosome component RraA (regulator of RNase E activity)Translation, ribosomal structure and biogenesis [J] 1.06
COG003016S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity)Translation, ribosomal structure and biogenesis [J] 0.53
COG1764Organic hydroperoxide reductase OsmC/OhrADefense mechanisms [V] 0.53
COG1765Uncharacterized OsmC-related proteinGeneral function prediction only [R] 0.53
COG3685Ferritin-like metal-binding protein YciEInorganic ion transport and metabolism [P] 0.53

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.47 %
UnclassifiedrootN/A0.53 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2065487018|GPINP_F5MS3JC02F77AFAll Organisms → cellular organisms → Bacteria506Open in IMG/M
2088090014|GPIPI_17369957All Organisms → cellular organisms → Bacteria1477Open in IMG/M
2166559005|cont_contig55358All Organisms → cellular organisms → Bacteria834Open in IMG/M
3300002245|JGIcombinedJ26739_101723416All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300004463|Ga0063356_103275675All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300005166|Ga0066674_10006821All Organisms → cellular organisms → Bacteria4556Open in IMG/M
3300005167|Ga0066672_10076493All Organisms → cellular organisms → Bacteria1992Open in IMG/M
3300005167|Ga0066672_10904042All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300005174|Ga0066680_10386188All Organisms → cellular organisms → Bacteria891Open in IMG/M
3300005175|Ga0066673_10099298All Organisms → cellular organisms → Bacteria1560Open in IMG/M
3300005175|Ga0066673_10244917All Organisms → cellular organisms → Bacteria1037Open in IMG/M
3300005175|Ga0066673_10424069All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300005175|Ga0066673_10521130All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300005176|Ga0066679_10320006All Organisms → cellular organisms → Bacteria1011Open in IMG/M
3300005176|Ga0066679_10621455All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300005178|Ga0066688_10214494All Organisms → cellular organisms → Bacteria1225Open in IMG/M
3300005178|Ga0066688_10971037All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300005179|Ga0066684_10709598All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300005184|Ga0066671_10113612All Organisms → cellular organisms → Bacteria1523Open in IMG/M
3300005184|Ga0066671_11020551All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300005184|Ga0066671_11071319All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300005289|Ga0065704_10040154All Organisms → cellular organisms → Bacteria1447Open in IMG/M
3300005290|Ga0065712_10008551All Organisms → cellular organisms → Bacteria2899Open in IMG/M
3300005290|Ga0065712_10022695All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1915Open in IMG/M
3300005294|Ga0065705_10021188All Organisms → cellular organisms → Bacteria1514Open in IMG/M
3300005328|Ga0070676_10099119All Organisms → cellular organisms → Bacteria1797Open in IMG/M
3300005330|Ga0070690_100458518All Organisms → cellular organisms → Bacteria946Open in IMG/M
3300005331|Ga0070670_101036355All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300005335|Ga0070666_10050984All Organisms → cellular organisms → Bacteria2785Open in IMG/M
3300005347|Ga0070668_102059896All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300005354|Ga0070675_100358432All Organisms → cellular organisms → Bacteria1294Open in IMG/M
3300005354|Ga0070675_101465015All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300005355|Ga0070671_101366015All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300005366|Ga0070659_101442033All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300005435|Ga0070714_100972652All Organisms → cellular organisms → Bacteria825Open in IMG/M
3300005437|Ga0070710_10142456All Organisms → cellular organisms → Bacteria1471Open in IMG/M
3300005437|Ga0070710_10840697All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300005444|Ga0070694_100201476All Organisms → cellular organisms → Bacteria1484Open in IMG/M
3300005446|Ga0066686_11110604All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300005447|Ga0066689_10047398All Organisms → cellular organisms → Bacteria2289Open in IMG/M
3300005450|Ga0066682_10725836All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300005451|Ga0066681_10475942All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300005451|Ga0066681_10853737All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300005454|Ga0066687_10050791All Organisms → cellular organisms → Bacteria1931Open in IMG/M
3300005459|Ga0068867_100131958All Organisms → cellular organisms → Bacteria1942Open in IMG/M
3300005526|Ga0073909_10494760All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300005545|Ga0070695_100865732All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300005552|Ga0066701_10226439All Organisms → cellular organisms → Bacteria1152Open in IMG/M
3300005553|Ga0066695_10058653All Organisms → cellular organisms → Bacteria2302Open in IMG/M
3300005554|Ga0066661_10084070All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1880Open in IMG/M
3300005555|Ga0066692_10221925All Organisms → cellular organisms → Bacteria1188Open in IMG/M
3300005566|Ga0066693_10395916All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300005569|Ga0066705_10628315All Organisms → cellular organisms → Bacteria655Open in IMG/M
3300005574|Ga0066694_10605734All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300005575|Ga0066702_10012863All Organisms → cellular organisms → Bacteria → Proteobacteria3830Open in IMG/M
3300005598|Ga0066706_11376348All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300006028|Ga0070717_11112090All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300006046|Ga0066652_100838346All Organisms → cellular organisms → Bacteria878Open in IMG/M
3300006163|Ga0070715_10707016All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300006175|Ga0070712_100970730All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300006755|Ga0079222_11005774All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300006791|Ga0066653_10640106All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300006794|Ga0066658_10447845All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300006796|Ga0066665_10410276All Organisms → cellular organisms → Bacteria1118Open in IMG/M
3300006797|Ga0066659_10730606All Organisms → cellular organisms → Bacteria812Open in IMG/M
3300006800|Ga0066660_10034836All Organisms → cellular organisms → Bacteria3138Open in IMG/M
3300006804|Ga0079221_11102496All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300006854|Ga0075425_100111212All Organisms → cellular organisms → Bacteria3123Open in IMG/M
3300006871|Ga0075434_101235734All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300006903|Ga0075426_11417576All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300009012|Ga0066710_104836414All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300009094|Ga0111539_12977868All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300010038|Ga0126315_10886539All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300010375|Ga0105239_12299016All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300010403|Ga0134123_12705837All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300012205|Ga0137362_10618940All Organisms → cellular organisms → Bacteria933Open in IMG/M
3300012211|Ga0137377_10097544All Organisms → cellular organisms → Bacteria2781Open in IMG/M
3300012285|Ga0137370_10500546All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300012582|Ga0137358_10586777All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300012582|Ga0137358_10695644All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300012924|Ga0137413_11250185All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300012925|Ga0137419_11406152All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300012958|Ga0164299_10194041All Organisms → cellular organisms → Bacteria1167Open in IMG/M
3300012985|Ga0164308_10434127All Organisms → cellular organisms → Bacteria1083Open in IMG/M
3300012987|Ga0164307_11839684All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300013296|Ga0157374_11277442All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300013308|Ga0157375_12288164All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300014325|Ga0163163_12524746All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300015359|Ga0134085_10394145All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300017792|Ga0163161_10837396All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300017997|Ga0184610_1212262All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300018000|Ga0184604_10012809All Organisms → cellular organisms → Bacteria1822Open in IMG/M
3300018051|Ga0184620_10142036All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300018054|Ga0184621_10057676All Organisms → cellular organisms → Bacteria1311Open in IMG/M
3300018061|Ga0184619_10440595All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300018066|Ga0184617_1000219All Organisms → cellular organisms → Bacteria5825Open in IMG/M
3300018433|Ga0066667_10248874All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1345Open in IMG/M
3300018433|Ga0066667_11271748All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300019789|Ga0137408_1106982All Organisms → cellular organisms → Bacteria8888Open in IMG/M
3300019789|Ga0137408_1259584All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae1634Open in IMG/M
3300019789|Ga0137408_1268268All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae4501Open in IMG/M
3300019869|Ga0193705_1013656All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1774Open in IMG/M
3300019870|Ga0193746_1022932All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300019874|Ga0193744_1056618All Organisms → cellular organisms → Bacteria750Open in IMG/M
3300019877|Ga0193722_1035804All Organisms → cellular organisms → Bacteria1279Open in IMG/M
3300019877|Ga0193722_1038040All Organisms → cellular organisms → Bacteria1236Open in IMG/M
3300019881|Ga0193707_1051682All Organisms → cellular organisms → Bacteria1308Open in IMG/M
3300019882|Ga0193713_1044799All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1276Open in IMG/M
3300019883|Ga0193725_1098322All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300019885|Ga0193747_1104392All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300019886|Ga0193727_1186540All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300019887|Ga0193729_1006342All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae5563Open in IMG/M
3300019887|Ga0193729_1102762All Organisms → cellular organisms → Bacteria1085Open in IMG/M
3300019890|Ga0193728_1192683All Organisms → cellular organisms → Bacteria862Open in IMG/M
3300019997|Ga0193711_1039817All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300019998|Ga0193710_1005810All Organisms → cellular organisms → Bacteria1238Open in IMG/M
3300019999|Ga0193718_1091288All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300019999|Ga0193718_1108925All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300020001|Ga0193731_1042761All Organisms → cellular organisms → Bacteria1195Open in IMG/M
3300020006|Ga0193735_1059257All Organisms → cellular organisms → Bacteria1124Open in IMG/M
3300020010|Ga0193749_1081094All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300020018|Ga0193721_1036526All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1298Open in IMG/M
3300020579|Ga0210407_10279831All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1302Open in IMG/M
3300020581|Ga0210399_10915110All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300020583|Ga0210401_10011106All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae8795Open in IMG/M
3300020583|Ga0210401_10838179All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300021078|Ga0210381_10216411All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300021168|Ga0210406_10497535All Organisms → cellular organisms → Bacteria964Open in IMG/M
3300021168|Ga0210406_10675750All Organisms → cellular organisms → Bacteria798Open in IMG/M
3300021178|Ga0210408_10304489All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1271Open in IMG/M
3300021411|Ga0193709_1069542All Organisms → cellular organisms → Bacteria796Open in IMG/M
3300021413|Ga0193750_1001527All Organisms → cellular organisms → Bacteria6288Open in IMG/M
3300021413|Ga0193750_1002631All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus4812Open in IMG/M
3300021413|Ga0193750_1003294All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae4329Open in IMG/M
3300021413|Ga0193750_1023447All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae1456Open in IMG/M
3300021413|Ga0193750_1027785All Organisms → cellular organisms → Bacteria1304Open in IMG/M
3300021432|Ga0210384_10284764All Organisms → cellular organisms → Bacteria1488Open in IMG/M
3300022694|Ga0222623_10197129All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300025290|Ga0207673_1000950All Organisms → cellular organisms → Bacteria3120Open in IMG/M
3300025893|Ga0207682_10078062All Organisms → cellular organisms → Bacteria1414Open in IMG/M
3300025901|Ga0207688_10001123All Organisms → cellular organisms → Bacteria13760Open in IMG/M
3300025904|Ga0207647_10110120All Organisms → cellular organisms → Bacteria1628Open in IMG/M
3300025923|Ga0207681_11241238All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300025925|Ga0207650_10761895All Organisms → cellular organisms → Bacteria819Open in IMG/M
3300025933|Ga0207706_10268576All Organisms → cellular organisms → Bacteria1489Open in IMG/M
3300025938|Ga0207704_10131420All Organisms → cellular organisms → Bacteria1734Open in IMG/M
3300026078|Ga0207702_10633018All Organisms → cellular organisms → Bacteria1051Open in IMG/M
3300026089|Ga0207648_10050780All Organisms → cellular organisms → Bacteria3626Open in IMG/M
3300026308|Ga0209265_1013154All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2577Open in IMG/M
3300026308|Ga0209265_1102724All Organisms → cellular organisms → Bacteria741Open in IMG/M
3300026309|Ga0209055_1108159All Organisms → cellular organisms → Bacteria1090Open in IMG/M
3300026310|Ga0209239_1112549All Organisms → cellular organisms → Bacteria1139Open in IMG/M
3300026310|Ga0209239_1180661All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300026316|Ga0209155_1041840All Organisms → cellular organisms → Bacteria1814Open in IMG/M
3300026323|Ga0209472_1274603All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300026331|Ga0209267_1099273All Organisms → cellular organisms → Bacteria1240Open in IMG/M
3300026332|Ga0209803_1057780All Organisms → cellular organisms → Bacteria1690Open in IMG/M
3300026335|Ga0209804_1174840All Organisms → cellular organisms → Bacteria935Open in IMG/M
3300026523|Ga0209808_1140449All Organisms → cellular organisms → Bacteria953Open in IMG/M
3300026530|Ga0209807_1039389All Organisms → cellular organisms → Bacteria2233Open in IMG/M
3300026530|Ga0209807_1053156All Organisms → cellular organisms → Bacteria1860Open in IMG/M
3300026530|Ga0209807_1153515All Organisms → cellular organisms → Bacteria875Open in IMG/M
3300026542|Ga0209805_1217508All Organisms → cellular organisms → Bacteria805Open in IMG/M
3300026548|Ga0209161_10404954All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300026816|Ga0207509_100702All Organisms → cellular organisms → Bacteria1353Open in IMG/M
3300027453|Ga0207624_101854All Organisms → cellular organisms → Bacteria998Open in IMG/M
3300027605|Ga0209329_1021717All Organisms → cellular organisms → Bacteria1298Open in IMG/M
3300027748|Ga0209689_1018543All Organisms → cellular organisms → Bacteria4359Open in IMG/M
3300027821|Ga0209811_10039677All Organisms → cellular organisms → Bacteria1585Open in IMG/M
3300027903|Ga0209488_10967576All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300028536|Ga0137415_10171120All Organisms → cellular organisms → Bacteria2002Open in IMG/M
3300028717|Ga0307298_10098205All Organisms → cellular organisms → Bacteria831Open in IMG/M
3300028793|Ga0307299_10284645All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300028799|Ga0307284_10099426All Organisms → cellular organisms → Bacteria1086Open in IMG/M
3300028884|Ga0307308_10397238All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300030831|Ga0308152_110152All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300030987|Ga0308155_1013934All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300030987|Ga0308155_1030082All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300030990|Ga0308178_1048587All Organisms → cellular organisms → Bacteria786Open in IMG/M
3300030990|Ga0308178_1062672All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300030990|Ga0308178_1100922All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300031081|Ga0308185_1030967All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300031081|Ga0308185_1054432All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300031125|Ga0308182_1009157All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300031446|Ga0170820_16893641All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300031716|Ga0310813_11931530All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300031962|Ga0307479_10425051All Organisms → cellular organisms → Bacteria1313Open in IMG/M
3300034644|Ga0370548_050347All Organisms → cellular organisms → Bacteria741Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil25.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil23.81%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.35%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.23%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.70%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.17%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.17%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.65%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.65%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.12%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.12%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.59%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.59%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.06%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.06%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.06%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.06%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.06%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.06%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.06%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.06%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.53%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.53%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.53%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.53%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.53%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.53%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.53%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.53%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.53%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.53%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.53%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.53%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.53%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.53%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.53%
SimulatedEngineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated0.53%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2065487018Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
2088090014Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
2166559005Simulated microbial communities from Lyon, FranceEngineeredOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019869Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2EnvironmentalOpen in IMG/M
3300019870Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m1EnvironmentalOpen in IMG/M
3300019874Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1EnvironmentalOpen in IMG/M
3300019877Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1EnvironmentalOpen in IMG/M
3300019881Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300019885Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300019997Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2EnvironmentalOpen in IMG/M
3300019998Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m1EnvironmentalOpen in IMG/M
3300019999Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1EnvironmentalOpen in IMG/M
3300020001Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020010Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2EnvironmentalOpen in IMG/M
3300020018Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021411Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2EnvironmentalOpen in IMG/M
3300021413Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1EnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300025290Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5Host-AssociatedOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026308Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026816Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO21-B (SPAdes)EnvironmentalOpen in IMG/M
3300027453Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE15-D (SPAdes)EnvironmentalOpen in IMG/M
3300027457Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE17-D (SPAdes)EnvironmentalOpen in IMG/M
3300027605Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028717Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300030831Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_141 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030987Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030990Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031081Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_159 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031125Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_153 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300034644Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPINP_028816802065487018SoilMKPAAADLCLVLAGVGRISLQSSAKLLDQLRVRIDWAELLKPISSRPSVAASEAIREIA
GPIPI_003232802088090014SoilMKPVAADLCLVIVGVGRISLQSSAKLLDQLSVRTGELLEPLGSKPSVAASEAIREIA
cont_0358.000043902166559005SimulatedMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASVAIRGIAWGTDRQFAGTRD
JGIcombinedJ26739_10172341623300002245Forest SoilAGADLSLVVAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASEAIREIAWESDRQFA*
Ga0063356_10327567513300004463Arabidopsis Thaliana RhizosphereMKPVAADLCLVVAGVGRISLQSSAKLLDQLSVRIGELLDPRASKPSAVALEAIREIAWASDRQFAGTRD*
Ga0066674_1000682123300005166SoilMKPAVDDLCLFMAGVGRINLQSSAKLLDQLRVRIDWAELREPVSSTPSVAASEAIRGIGWESDRQFAGTRD*
Ga0066672_1007649323300005167SoilMKPAAADPCLVVAGVGRISLQSPAKVLDQLRVRIDWAELLEPLASKPSVAASVTIREIAWESDRQFAGTRD*
Ga0066672_1090404223300005167SoilMKPAAADLCLVMAGVGRINLQSSTKLLDQLGVRIDWAELLEPLASRPSVAASEAIREIAWESDRQFAGTRD*
Ga0066680_1038618813300005174SoilNRTVMKPAAADLCLVMAGVGRINLQSSTKLLDQLGVRIDWAELLEPLASRPSVAASEAIREIAWESDRQFAGTRD*
Ga0066673_1009929833300005175SoilMKPAVDDLCLVMAGVGRINLQSSAKLLDQLRVRIDWAELREPVSSTPSVAASEAIRGIGWESDRQFAGTRD*
Ga0066673_1024491723300005175SoilMKPAAADLCLVMAGVGRISLQSSTKVLDQLRARIDRAELLEPLASRPSVAASEAIREIAWESDRQFAGTRD*
Ga0066673_1042406913300005175SoilMKPAGADPCLVMAGVGRISLQSSAKLLDQLSVRMDCAELLEPLASKPSVVALEAIREIGWESDRQFAGTRD*
Ga0066673_1052113023300005175SoilAAADLCLVVAGVGRISLQSPAKVLDQLRVRIDWAELLEPLASKPSVAASVTIREIAWESDRQFAGTRD*
Ga0066679_1032000633300005176SoilMKPAVGDLCLVMAGVGRISLQSSAKLLDQLRARIDRAELLEPLGSRPSVAASEAIREIAWESDRQFAGTRD*
Ga0066679_1062145513300005176SoilSRLKFVAAAQLINRTVMKPAAADPCLVVAGVGRISLQSPAKVLDQLRVRIDWAELLEPLASKPSVAASVTIREIAWESDRQFA*
Ga0066688_1021449423300005178SoilMKPAAADLCLVIAGVGRISLQNPAELLDQLSVRIGKVLEPLASKPSAVALEAIREIAWASDRQFGGTRD*
Ga0066688_1097103713300005178SoilMKPAAADLCLVVAGVGRISLQSPAKVLDQLRVRIDWAELLEPLASKPSVAASVTIREIAWESDRQFA
Ga0066684_1070959813300005179SoilMKPAAADLCLVMAGVGRISLQSSTKVLDQLRARIDRAELLEPLASRPSVAASEAIREIAWESDRQFAGTPD*
Ga0066671_1011361223300005184SoilMSRLKFVAAAQLINRTVMKPAAADLCLVVAGVGRISLQSPAKVLDQLRVRIDWAELLEPLASKPSVAASVTIREIAWESDRQFAGTRD*
Ga0066671_1102055113300005184SoilMKPAVDDLCLVMAGVGRINLQSSTKLLDQLGVRIDWAKLLEPLAARPSVAASEAIREIAWESDRQFAGTRD*
Ga0066671_1107131913300005184SoilMKPAAAELCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASVAIRGIAWESDRQFAGTRD*
Ga0065704_1004015413300005289Switchgrass RhizosphereMKPVAADLCLVVAGVGRISLQRSAKLLDQLRVRIGEVLDPLASKPSAVALEAIREIAWASDRQFAGTRD*
Ga0065712_1000855143300005290Miscanthus RhizosphereMKPVAADLCLVVAGVGRISLQSSATLLDQLSVRIRELLEPPASKPGVAASEAIREIAWESDQQFAGTRD*
Ga0065712_1002269513300005290Miscanthus RhizosphereMKPAAADLCLVLGGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASVAIREIAWGTDRQFAGTRD*
Ga0065705_1002118833300005294Switchgrass RhizosphereMKPVAADLCFVVAGVGRISLQSSAKLLDQLRVRIGEVLDPLASKPSAVALEAIREIAWASDRQFAGTRD*
Ga0070676_1009911923300005328Miscanthus RhizosphereMKPAAADLCLVMAGVGRISLQSSAKLLDQLRVRIDWAELLDPIPSKPSVAASEAIRETAWGSDRQFSGTRD*
Ga0070690_10045851823300005330Switchgrass RhizosphereMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASVAIRGIAWGSDRQFAGRRD*
Ga0070670_10103635523300005331Switchgrass RhizosphereMKPAAADLCLVMAGAGRISLQNSAKLLDQLRVRIDWAELLDPIPSKPSVAASEAIRETAWGSDRQFSGTRD*
Ga0070666_1005098423300005335Switchgrass RhizosphereMKPAAADLCLVLGGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASVAIRGIAWGTDRQFAGTRD*
Ga0070668_10205989613300005347Switchgrass RhizosphereMKPVAADLCLVVAGVGRISLQSSAKLLDQLRVRIGEVLDPLASKPSAVALEAIREIAWASDRQFAGTRD*
Ga0070675_10035843213300005354Miscanthus RhizosphereMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASVAIREIAWGTDRQFAGTRD*
Ga0070675_10146501523300005354Miscanthus RhizosphereMKPVAADLCLVVAGVGRISLQSSAKLLDQLRVRIGEVLDPLASRPSVAALEAIREIAWASDRQFAGTRD*
Ga0070671_10136601523300005355Switchgrass RhizosphereMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVTASVAIRGIAWGTDRQFAGTRD*
Ga0070659_10144203313300005366Corn RhizosphereMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASVAIRGIAW
Ga0070714_10097265213300005435Agricultural SoilMKPAAADLCLVLGGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASVAIRGIAWGSDRQFAGRRD*
Ga0070710_1014245623300005437Corn, Switchgrass And Miscanthus RhizosphereMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELREPISSRPSVAASAAIREIAWESDRQFAGTRD*
Ga0070710_1084069713300005437Corn, Switchgrass And Miscanthus RhizosphereMKPAAADLCLVLAGVGRMNLQSSAKLLDQLRVRIDWAELPEPISFRPSVAASVAIREIAWESD
Ga0070694_10020147613300005444Corn, Switchgrass And Miscanthus RhizosphereKPVAADLCFVVAGVGRISLQSSAKLLDQLRVRIGEVLDPLASKPSAATLEAIREIAWASDRQFAGTRD*
Ga0066686_1111060413300005446SoilMKPAAADLCLVVAGVGRISLQSPAKVLDQLRVRIDWAELLEPLASKPSVAASVTIREIAWESDRQFAGTRD*
Ga0066689_1004739823300005447SoilMSRLKFVAAAQLINRTVMKPAAADPCLVVAGVGRISLQSPAKVLDQLRVKIDWAELLEPLASKPSVAASVTIREIAWESDRQFAGTRD*
Ga0066682_1072583613300005450SoilMKPVAADLCLVMAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASAAIREIAWESDRQFAGTRD*
Ga0066681_1047594223300005451SoilMSRLKFVAAAQLINRTVMKPVAADLCLVVAGVGRISLQSPAKVLDQLRVRIDWAELLEPLASKPSVAASVTIREIAWE
Ga0066681_1085373713300005451SoilMKPAVADLCLVMAGVGRINLQSSAKLLDQLRVRIDWAELREPISSRPSVAAWEAIREIGWESDRQFAGTRD*
Ga0066687_1005079143300005454SoilMKPAAADLCLVIAGVGRISLQNPAELLDQLSVRIGEVLEPLASKPSAVALEAIREIAWASDRQFGGTRD*
Ga0068867_10013195833300005459Miscanthus RhizosphereMKPAAADLCLVLGGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASVAIREIAWESDRQFAGRRD*
Ga0073909_1049476023300005526Surface SoilMKPAAADLRLVTDGVGRISLQSSAKLLDQLRVRIDWAELPKPISAKPSVAASEAIREIAWESDRQFA*
Ga0070695_10086573213300005545Corn, Switchgrass And Miscanthus RhizosphereMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASVAIRGIAWGTDRQFAGTRD*
Ga0066701_1022643933300005552SoilMKPAVDDLCLFMAGVGRINLQSSAKLLDQLRVRIDWAELRESISSTPSVAASEAIREI
Ga0066695_1005865313300005553SoilPAAADLCLVMAGVGRISLQSSTKVLDQLRARIDRAELLEPLASRPSVAASEAIREIAWESDRQFAGTRD*
Ga0066661_1008407033300005554SoilMKPAAADLCLVVAGVGRISLQSPAKVLDQLRVKIDWAELLEPLASKPSVAASVTIREIAWESDRQFAGTRD*
Ga0066692_1022192513300005555SoilMKPAAADLCLVVAGVGRISLQSPAKVLDQLRVKIDWAELLEPLASKPSVAASVTIREIA
Ga0066693_1039591613300005566SoilKPAAADLCLVLPGMGRISLQSSAKLLDQLSVRMDCAELLEPLASKPSVVAVEAIREIGWESDRQFAGTRD*
Ga0066705_1062831513300005569SoilMSRLKFVAAAQLINRTVMKPVAADLCLVVAGVGRISLQSPAKVLDQLRVRIDWAELLEPLASKPSVAASVTIREIAWESDRQFAGTRD*
Ga0066694_1060573413300005574SoilMSRLKFVAAAQLINRTVMKPAAADLAADLCLVVAGVGRISLQSPAKVLDQLRVRIDWAELLEPLASKPSVAASVTIREIAWESDRQFAGTRD*
Ga0066702_1001286383300005575SoilMKPAAADPCLVVAGVGRISLQSPAKVLDQLRVRIDWAELLEPLASKPSVAASVTIREIAWESDRQFA
Ga0066706_1137634813300005598SoilMKPAAADLCLVLAGVGRISLQNSTKLLDQLRVRIDWAELPEPISSRPSVAASEAIREIAWESDRQFAGTRD*
Ga0070717_1111209023300006028Corn, Switchgrass And Miscanthus RhizosphereMKPAAADLCLVLAGVGRMSLQSSAKLLDQLRVRIDWAELPEPISFRPSVAASVAIREIAWESDRQFAGTRD*
Ga0066652_10083834613300006046SoilMRPAGADPCLVMAGVGRISLQSSAKLLDQLSVRMDCAELLEPLASKPSVVALEAIREIGWESDRQFAGTRD*
Ga0070715_1070701613300006163Corn, Switchgrass And Miscanthus RhizosphereMKPAAADLCLVMAGVGRISLQSSAKLLDQLRVRIDWAELLKPLSAKPSVAASEAIREIAWESDRQFAGTRD*
Ga0070712_10097073013300006175Corn, Switchgrass And Miscanthus RhizosphereMKPAATDLCLVLAGVGRMNLQSSAKLLDQLRVRIDWAELPEPISFRPSVAASVAIREIAWESDRQFAGTRD*
Ga0079222_1100577423300006755Agricultural SoilMKPLAADLCIVVAGVGRISLQSSAKLLDQLSVRIGELLEPLASKPGVVALEAIPETA*
Ga0066653_1064010613300006791SoilMKPAVDDLCLFMAGVGRINLQSSAKLLDQLRVRIEWAELMEPISSRPSVAAWEAIREIGWESDRQFAGTRD*
Ga0066658_1044784513300006794SoilMKPAAADLCLVIAGVGRISLQSPAELLDQLSVRIGEVLEPLASKPKAVALEAIREIAWASDRQ
Ga0066665_1041027613300006796SoilAADLCLVMAGVGRINLQSSTKLLDQLGVRIDWAKLLEPLAARPSVAASEAIREIAWESDRQFAGTRD*
Ga0066659_1073060623300006797SoilWMSRLKFVAAAHLINRTVMKPAAADLCLVVAGVGRISLQSPAKVLDQLRVKIDWAELLEPLASKPSVAASVTIREIAWESDRQFAGTRD*
Ga0066660_1003483633300006800SoilMKPAAADLCLVVAGVGRISLQSPAKVLDQLRVRIDWAELLEPLASKPSVAASVTIREIAWESDRQFA*
Ga0079221_1110249623300006804Agricultural SoilVATDLCLVIVGVGRISMQSSAKLLDQLSVTIGEVMKPLALKPRAVALEAIREIGWENDRQCAGTRD*
Ga0075425_10011121243300006854Populus RhizosphereMKPAAADLCLVLAGVGRMSLQSSAKLLDQLRVRIDRAELLEPLASKPSVAASEAICEIAWESDRQFA*
Ga0075434_10123573423300006871Populus RhizosphereTVMKPVAADLCFVVAGVGRISLQSSAKLLDQLRVRIGEVLDPLASKPSAVALEAIREIAWASDRQFAGTRD*
Ga0075426_1141757623300006903Populus RhizosphereMFTVLKPAAADLCLVLPGMGRISLQSSAKLLDQLRVRIGSAKLAESITSRPCVAASEAIREIAWE
Ga0066710_10483641423300009012Grasslands SoilMKPAAADLCLVMAGVGRISLQSSTKVLDQLRARIDRAELLEPLASRPSVAASEAIREIAWESDRQFAGT
Ga0111539_1297786823300009094Populus RhizosphereMFTVLKPAAADLCLVLPGMGRISLQSSAKLLDQLRVRIGSAKLAEPITSRPCVAASEAIR
Ga0126315_1088653923300010038Serpentine SoilMKPAAADLCLVLDGVGRITLQSSAKLLDQLRVSIDLAELLEPLASKPSVAALEAIHEIAWESDRQFAGTRD*
Ga0105239_1229901613300010375Corn RhizosphereMKPVAADLCLVVAGVGRISLQSSAKLLDQLRVRIGEVRDPLASKPSAVALEAIREIAWASDRQFAGTRD*
Ga0134123_1270583723300010403Terrestrial SoilMKPAAADLCLVMAGAGRISLQNSAKLLDQLRVRIDRAELLDPIPSKPSVAASEAIRETAWGSDRQFSGTRD*
Ga0137362_1061894023300012205Vadose Zone SoilMKPGAADLCLVLAGVGRINLQSSAKLLDQLRVRIDWADLLEPISSRPSVAASEAIREIAWESDRQFAGTRD*
Ga0137377_1009754463300012211Vadose Zone SoilMSRLKFVAAAQLITRTVMKPAAADLCLVVAGVGRISLQSPAKVLDQLRVRLDWAELLEPVASKPRVAASVTIRESAWESDRQCAGTRD*
Ga0137370_1050054623300012285Vadose Zone SoilMGRSAVSNRTDMKPAAADLCLVLAGVGRITLQSSDKVLDQLSVRIDWASKPSVVASEAIREIAWETDRQFAGTLY*
Ga0137358_1058677723300012582Vadose Zone SoilMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASEAIREIAWESDRQFA*
Ga0137358_1069564413300012582Vadose Zone SoilMKPAAGDLCLVMAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASEAIREIAWESDRQFAGTRD*
Ga0137413_1125018523300012924Vadose Zone SoilMKPAAADLCLVLAGVGRISLQSSDKLLDQLGVRIDWAELPEPISSRPSVAASEAIREIAWESDRQFAGTRD*
Ga0137419_1140615213300012925Vadose Zone SoilMKPAAVDLSLVLPGAGQISLQRSAKLLDQLRVRIDWAELLEPISSRPSVAASEAIREIAWESDRQLAGTRD*
Ga0164299_1019404133300012958SoilMGKLKFVAAAQVSNRTIMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPPISSRPSVAASVAIRGIAWG
Ga0164308_1043412733300012985SoilMKPVAADLCLVVAGVGRISLQSSATLLDQLSVRIGELLEPLASKPGVAASEAIREIAWASDRQFAG
Ga0164307_1183968413300012987SoilMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISARPSVAASVAIRGIAWESDRQFAGTRD*
Ga0157374_1127744213300013296Miscanthus RhizosphereMKPVAADLCFVVAGVGRISLQSSAKLLDQLSVRIGELLEPLASRPSVAASEAIREI
Ga0157375_1228816423300013308Miscanthus RhizosphereMKPAAADLCLVMAGVGRISLQSSAKLLDQLRVRIDWAELLDPIPSKPSVAASEAIRETAWGSGRQFSGTRD*
Ga0163163_1252474623300014325Switchgrass RhizosphereMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELLDPIPSKPSVAASEAIREIAWGSDQQFSGTRD*
Ga0134085_1039414513300015359Grasslands SoilMKPAVDDLCLVMAGVGRISLQSSIKLLDQLRARIDRAELLEPLTSRPSVAASEAIREIAWESG
Ga0163161_1083739623300017792Switchgrass RhizosphereMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASVAIRGIAWGTDRQFA
Ga0184610_121226213300017997Groundwater SedimentPLRISNRTFMKAAAADLCLVLAGVGRITLQSSDKVLDQLSVRIDCAELLEPLASKPSVVALEASCEIAWESDRQFAGTRD
Ga0184604_1001280913300018000Groundwater SedimentMKAAAADLCLVLAGVGRITLQSSDKVLDQLSVRIDGASKPSAAASEASREIAWESDRQFAGTRD
Ga0184620_1014203623300018051Groundwater SedimentMKPAAADLCLVMAGIGRISLQSSDKLLDQLRVRIDWAELLKPISAKPSVAASEAIREIAWESDRQFAGTRD
Ga0184621_1005767623300018054Groundwater SedimentMKPAAADLCLVLAAVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASVAIREIAWESDRQFAGKRD
Ga0184619_1044059523300018061Groundwater SedimentMKPAAADLSLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAAWEAIREIAWESDRQFAGTRD
Ga0184617_1000219113300018066Groundwater SedimentMKPAAADLCLVLAGIGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAAWEAIREIAWESDRQFAGTRD
Ga0066667_1024887423300018433Grasslands SoilMSRLKFVAAAQLINRTVMKPAAADLCLVVAGVGRISLQSPAKVLDQLRVRIDWAELLEPLASKPSVAASVTIREIAWESDRQFAGTRD
Ga0066667_1127174813300018433Grasslands SoilMKPAVDDLCLFMAGVGRINLQSSAKLLDQLRVRIDWAELREPVSSTPSVAASEAIRGIGWESDRQFAGTRD
Ga0137408_110698263300019789Vadose Zone SoilMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASVAIREIAWESDRQFGETRD
Ga0137408_125958423300019789Vadose Zone SoilMKPAAADLCLVLAGVGRISLQSSAKLLDQLRVRIDWAKLLEPISSRPSVAASVAIREIAWESDRQFAGTRD
Ga0137408_126826823300019789Vadose Zone SoilMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASVAIRGIAWESDRQFA
Ga0193705_101365623300019869SoilMKPATADLCLVVAGVGQISLQSSAKLLDQLRVRIDWAELLKPISAKPSVAASVAIREIAWESDRQFAGTRD
Ga0193746_102293223300019870SoilMKPAAADLCLVVAGVGQISLQSSAKLLDQLRVRIDWAELLKPISAKPSVAASEAIREIAWESDRQFAGTRD
Ga0193744_105661813300019874SoilMKPAAADLCLVVAGVGQISLQSSAKLLDQLRVRIDWAELLKPISAKPSVAASVAIREIAWESDRQFAGTRD
Ga0193722_103580413300019877SoilMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASEAIREIAWESDRQFAGTRD
Ga0193722_103804013300019877SoilMKPAAGDLCLVMAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASAAIREIAWESDRQFAGRRD
Ga0193707_105168233300019881SoilMKPAAGDLCLVMAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPNVAASAAIGEIAWESDRQFAGTRD
Ga0193713_104479923300019882SoilMKPAAGDLCLVMAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASAAIREIAWESDRQFAGTRD
Ga0193725_109832213300019883SoilMKPAAADLCLVVAGVGQISLQSSAKLLDQLRVRIDWAELLKPISAKPSVAASEAIREIAWESDRQFAGTR
Ga0193747_110439223300019885SoilMKPAAADLCLVLAGLGRISLQSSDKLLDQLRVRIDWAELPEPISSRPRGAASEAIREIAWESDRQFAGTRD
Ga0193727_118654013300019886SoilMKPAAADLCLVLAGAGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASVAIREIAWESDRQFAGTRD
Ga0193729_100634253300019887SoilMKPAAADLCFVVAGVGRISVQNSAKLLDQLRVRIDLAELLQPLASKPRVAASEAIREIGWESDRQFAGTRD
Ga0193729_110276223300019887SoilMKPAAADLSLVVAGVGRISLQSSDKFLDQLRVRIDWAELPEPISSRPSVAASEAIREIAWESDRQFAGTRD
Ga0193728_119268313300019890SoilMKPAAADLGFVVAGVGRISVQNSAKLLDQLRVRIDLAELLQPLASKPRVAASEAIREIGWESDRQFAGTRD
Ga0193711_103981713300019997SoilIMKPAADDLCLVLAGAGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASVAIREIAWESDRQFAGTRD
Ga0193710_100581013300019998SoilMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELLKPISAKPSVAASEAIREIAWESDRQFAGTRD
Ga0193718_109128813300019999SoilMKPAAADLCLVMAGIGRISLLSSDKLLDQLRVRIDWAELLKPISAKPSVAASEAIREIAWESDRQFAGTRD
Ga0193718_110892523300019999SoilMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASEAIREIAWESDRQFAGT
Ga0193731_104276113300020001SoilMKPAAADLCLVVAGVGQISLQSSAKLLDQLRVRIDWAELLKPISAKPSVAASVAIRE
Ga0193735_105925713300020006SoilVTKAAAADLCLVVAGVGQISLQSSAKLLDQLRVRIDWAELLKPISAKPSVAASEAIREIAWESDRQFAGTRD
Ga0193749_108109413300020010SoilMKPAADLCLVLAGVGRISLQSSAKLLDQLRVKIDWEELLEPISSRPSVAASEAIREIAWESDRQFAGTRD
Ga0193721_103652623300020018SoilMKPATADLCLVVAGVGQISLQSSAKLLDQLRVRIDWAELLKPISAKPSVAASEAIREIAWESDRQFAGTRD
Ga0210407_1027983123300020579SoilMKPAATDLCLVMAGVGRISLQSSAKLLDQLRVRIDWAELLDPIPSKPSVAASEAIREIAWGSDRQFSGTRD
Ga0210399_1091511013300020581SoilMKPAATDLCLVMAGVGRISLQSSAKLLDQLRVRIDWAELLDPIPSKPSVAASEAIREIAWGSDRQFAGTRD
Ga0210401_1001110623300020583SoilMKPAAVDLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASVAIRGIAWESDRQFAGTRD
Ga0210401_1083817913300020583SoilMKPAAADLCLVLAGVGRISLQGSAKLLDQLRVRIDLAELLEPLASKPSVAASVAIREIAWESDRQFAGTRD
Ga0210381_1021641113300021078Groundwater SedimentMKPVAADLCLVVAGVGRISLQSSAKLLDQLRVRIGWAKLLEPLASRPSVAALEAIREIALESDRQFAGTRD
Ga0210406_1049753523300021168SoilMKPAVADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELLKPISAKPSVAASVAIREIAWESDRQFAGTHD
Ga0210406_1067575023300021168SoilMKPAATDLCLVMAGVGRISLQSSAKLLDQLRVKVDWAELLDPIPSKPSVAASEAIREIAWGSDRQFAGTRD
Ga0210408_1030448923300021178SoilMKPAATDLCLVMAGVGRISLQSSAKLLDQLRVKIDWAELLDPIPSKPSVAASEAIREIAWGSDRQFAGTLD
Ga0193709_106954223300021411SoilMKPAAADLSLVVAGVGRISLQSSDKFLDQLRVRIDWAELPEPISSRPSVAASVAIREIAWENDRQFAGTRD
Ga0193750_100152793300021413SoilMKPAADLCLVLAGVGRISLQSSAKLLDQLRVRIDWAKLLEPISSRPSVAASEAIREIAWESDRQFAGTRD
Ga0193750_100263113300021413SoilMKPTADFCLVLAGVGRISLQSSAKLLDQLRVRVSWAKLLEPISSRPSVAASGAIREIAWESDRQFAGTRD
Ga0193750_100329463300021413SoilMKPAAADLSLVVAGVGRISLQSSDKLLDQFRVRIDWAELPEPISSRPSVAASEAIREIAWESDRQFA
Ga0193750_102344723300021413SoilMKPAAPDLCFVVAGVGRISLQNSAKLLDQLRVRVDCAKLLEPLASKPSVAASVAIREIAWESDRQFAGTRD
Ga0193750_102778533300021413SoilMKPATADLCLVLAGVGRISLQSSAKLLDQLRVKIDWEELLEPISSRPSVAASEAIREIAWESD
Ga0210384_1028476413300021432SoilMKPAATDLCLVMAGVGRISLQSSAKLLDQLRVRIDWAELLDPTPSKPSVAASEAIREIAWGSDRQFSGTRD
Ga0222623_1019712913300022694Groundwater SedimentMKPAAVDLCLVVAGVGQISLQSSAKLLDQLRVRIDWAELLKPISAKPSVAASVAIREIAWESDRQFAGTRD
Ga0207673_100095073300025290Corn, Switchgrass And Miscanthus RhizosphereMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASVAIRGIAWGSDRQFAGTRD
Ga0207682_1007806223300025893Miscanthus RhizosphereMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAEIPEPISSRPSVAASVAIRGIAWGTDRQFAGTRD
Ga0207688_1000112313300025901Corn, Switchgrass And Miscanthus RhizosphereMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASVAIRGIAWGTDRQFAGRRD
Ga0207647_1011012023300025904Corn RhizosphereMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASVAIRGIAWGSDRQFAGRRD
Ga0207681_1124123813300025923Switchgrass RhizosphereMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASVAIREIAWGTD
Ga0207650_1076189513300025925Switchgrass RhizosphereMKLAATDLCLVMAGVGRISLQNSAKLLDQLRVRIDWAELLDPIPSKPSVAASEAIREIAWGSDR
Ga0207706_1026857623300025933Corn RhizosphereMKPVAADLCLVVAGVGRISLQSSAKLLDQLRVRIGEVLDPLASKPSAVALEAIREIAWASDRQFAGTRD
Ga0207704_1013142023300025938Miscanthus RhizosphereMKPAAADLCLVLGGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASVAIREIAWGTDRQFAGTRD
Ga0207702_1063301823300026078Corn RhizosphereMKPAAADLCLVLGGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASVAIRGIAWGTDRQFAGTRD
Ga0207648_1005078033300026089Miscanthus RhizosphereMKPAAADLCLVLGGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASVAIREIVWESDRQFAGTRD
Ga0209265_101315443300026308SoilTVMKPAVDDLCLVMAGVGRINLQSSAKLLDQLRVRIDWAELREPVSSTPSVAASEAIRGIGWESDRQFAGTRD
Ga0209265_110272423300026308SoilMKPAAADLCLVIAGVGRISLQNPAELLDQLSVRIGEVLEPLASKPSAVALEAIREIAWASDRQFGGTRD
Ga0209055_110815913300026309SoilMKPAAADLCLVMAGVGRINLQSSTKLLDQLGVRIDWAELLEPLASRPSVAASEAIREIAWESDRQFAGTRD
Ga0209239_111254923300026310Grasslands SoilMKPAAADLCLVVAGVGRISLQSPAKVLDQLRVRIDWAELLEPLASKPSVAASVTIREIAWESDRQFAGTRD
Ga0209239_118066123300026310Grasslands SoilMGRSAVSNRTDMKPAAADLCLVLAGVGRITLQSSDKVLDQLSVRIDWASKPSVAASEAIREIAWETDRQFAGTLY
Ga0209155_104184013300026316SoilMKPAAADLCLVMAGVGRISLQSSTKVLDQLRARIDRAKLLEPLASRPSVAASEAIREIAWESDRQFAGTRD
Ga0209472_127460323300026323SoilMKPAAADLCLVMAGVGRISLQSSTKVLDQLRARIDRAELLEPLASRPSVAASEAIREIAWESDRQFAGTRD
Ga0209267_109927323300026331SoilMKPAVDDLCLFMAGVGRINLQSSAKLLDQLRVRIDWAELREPVSSTPSVAASEAIRGIAWESDRQFAGTRD
Ga0209803_105778033300026332SoilMKPAVDDLCLVMAGVGRINLQSSAKLLDQLRVRIDWAELREPVSSTPSVAASEAIRGIGWESDRQFAGTRD
Ga0209804_117484013300026335SoilMSRLKFVAAAQLINRTVMKPAAADPCLVVAGVGRISLQSPAKVLDQLRVRIDWAELLEPLASKPSVAASVTIREIAWESDRQFAGTRD
Ga0209808_114044913300026523SoilAVMKPAGADPCLVMAGVGRISLQSSAKLLDQLSVRMDCAELLEPLASKPSVVALEAIREIGWESDRQFAGTRD
Ga0209807_103938943300026530SoilMKPAGADPCLVMAGVGRISLQSSAKLLDQLSVRMDCAELLEPLASKPSVVALEAIREIGWESDRQFAGTRD
Ga0209807_105315633300026530SoilMKPVAADLCLVVAGVGRISLQSPAKVLDQLRVRIDWAELLEPLASKPSVAASVTIREIAWESDRQFAGTRD
Ga0209807_115351523300026530SoilMKPAAADLCLVMAGVGRISLQSSTKVLDQLRARIDRAELLEPLASRPSVAASEAIREIAWESDRQFAETRD
Ga0209805_121750813300026542SoilMKPAVGDLCLVMAGVGRISLQSSAKLLDQLRARIDRAELLEPLGSRPSVAASEAIREIAWESDRQFA
Ga0209161_1040495413300026548SoilMKPAAADLCLVLAGVGRISLQNSTKLLDQLRVRIDWAELPEPISSRPSVAASEAIREIAWESDRQFAGTRD
Ga0207509_10070223300026816SoilMKPVAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASEAIREIAWESDRQFAGTRD
Ga0207624_10185423300027453SoilKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASVAIRGIAWGTDRQFAGTRD
Ga0207625_10100913300027457SoilAADLCFVVAGVGRISLQSSAKLLDQLRVRIGEVLDPLASKPSVVALEAIREIA
Ga0209329_102171723300027605Forest SoilMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASEAIREIAWESDRQFAGTHD
Ga0209689_101854333300027748SoilMKPAAADLCLVVAGVGRISLQSPAKVLDQLRVKIDWAELLEPLASKPSVAASVTIREIAWESDRQFAGTRD
Ga0209811_1003967723300027821Surface SoilMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELLDPIPSKPSVAASEAIREIAWGSDRQFSGTRD
Ga0209488_1096757613300027903Vadose Zone SoilMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASEAIRGIAWESDRQFAGTRD
Ga0137415_1017112033300028536Vadose Zone SoilMKPAAADLCLVLAGVGRISLQSSDKLLDQLGVRIDWAELPEPISSRPSVAASVAIRGIAWESDRQFA
Ga0307298_1009820523300028717SoilMKPAAADLCLVLAGIGRISLQSSDKLLDQLRVRIDWAELPEPISSRPRGAASEAIREIAWESDRQFAGTRD
Ga0307299_1028464513300028793SoilMKPAAADLCLVLAGIGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAAWEAIRGIAWASDRQFAGTRD
Ga0307284_1009942623300028799SoilMKHAAADLCLVLAGIGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAAWEAIRGIAWASDRQFAGTRD
Ga0307308_1039723813300028884SoilMKPAAADLCLVLAGIGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAAWEAIREIAWES
Ga0308152_11015213300030831SoilMKPAAADLCLVLAGVGQISLQSSAKLLDQLRVRIDWAELLEPLASRPSVAASEAIREIA
Ga0308155_101393423300030987SoilMGRSAVSNRTDMKPAAADLCLVLAGVGRITLQSSDKVLDQLSVRIDWASKPSAAASEASREI
Ga0308155_103008213300030987SoilDLCLVIVGVGQISLQSSAKLLDQLSVRIGELLEPLASRPSVAASEAIREIAWASDRQFAGTRD
Ga0308178_104858723300030990SoilMKPAAADLCLVLAGLGRISLQSSDKLLDQLRVRIDGASKPSVAASVASREIAWESDRQFAGTRD
Ga0308178_106267223300030990SoilMKPVAADLCLVIVGVGQISLQSSAKLLDQLRVRTDWAELLKPISARPSVSASEAIREIA
Ga0308178_110092213300030990SoilMGRSAVSNRTDMKPAAADLCLVLAGVGRITLQSSDKVLDQLSVRIDWASKPSAAASEASREIAWES
Ga0308185_103096723300031081SoilMKPVAADLCLVIVGVGQISLQSSAKLLDQLSVRIGELLEPLASRPSVAASEAIREIAWASDRQFAGTRD
Ga0308185_105443213300031081SoilMKPAAADLCLVLAGIGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAAWEAIREIA
Ga0308182_100915723300031125SoilMKPAAGDLCLVMAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAASAAIREIAWESD
Ga0170820_1689364123300031446Forest SoilMKPAAADLCFVVAGVGWISLRNSAKLLDQLRVRIDLAKLLKPLASKPSVAASVAIREIEWESDRRFAGTRD
Ga0310813_1193153013300031716SoilMKPVAADLCLVIVGVGRISLQSSAKLLDQLSVRIGEVLEPLALKRSAVALEAIREIAWESDQQFAEMRD
Ga0307479_1042505123300031962Hardwood Forest SoilMKPAAADLCLVLAGVGRISLQSSAKLLDQLRVRIDWAELLDPIPSKPSVAASEAIREIAWGSDRQFA
Ga0370548_050347_3_1793300034644SoilMKPAAADLCLVLAGVGRISLQSSDKLLDQLRVRIDWAELPEPISSRPSVAAWEAIRGIA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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