NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F028242

Metagenome / Metatranscriptome Family F028242

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F028242
Family Type Metagenome / Metatranscriptome
Number of Sequences 192
Average Sequence Length 76 residues
Representative Sequence MDRFIDQIVRRSIRHARLMLRQGSYNWPVARLALRKILADLEARAPNHPSLPRLRAFIASKDRAWLRENR
Number of Associated Samples 154
Number of Associated Scaffolds 192

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 56.25 %
% of genes near scaffold ends (potentially truncated) 43.23 %
% of genes from short scaffolds (< 2000 bps) 81.77 %
Associated GOLD sequencing projects 135
AlphaFold2 3D model prediction Yes
3D model pTM-score0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (66.667 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil
(9.375 % of family members)
Environment Ontology (ENVO) Unclassified
(20.833 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(48.438 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 59.18%    β-sheet: 0.00%    Coil/Unstructured: 40.82%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.79
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.27.1.1: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesd1h3na11h3n0.73268
a.27.1.1: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesd1f7ua11f7u0.73077
a.27.1.0: automated matchesd4qrea24qre0.71918
a.27.1.0: automated matchesd5xgqa25xgq0.71832
a.27.1.0: automated matchesd3kfla23kfl0.71412


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 192 Family Scaffolds
PF00248Aldo_ket_red 30.21
PF02310B12-binding 16.67
PF01268FTHFS 9.90
PF01642MM_CoA_mutase 1.04
PF01134GIDA 1.04
PF01979Amidohydro_1 0.52
PF00872Transposase_mut 0.52
PF05591T6SS_VipA 0.52
PF04140ICMT 0.52

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 192 Family Scaffolds
COG2759Formyltetrahydrofolate synthetaseNucleotide transport and metabolism [F] 9.90
COG1884Methylmalonyl-CoA mutase, N-terminal domain/subunitLipid transport and metabolism [I] 1.04
COG3328Transposase (or an inactivated derivative)Mobilome: prophages, transposons [X] 0.52
COG3516Predicted component TssA of the type VI protein secretion systemIntracellular trafficking, secretion, and vesicular transport [U] 0.52


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A66.67 %
All OrganismsrootAll Organisms33.33 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001131|JGI12631J13338_1014119Not Available943Open in IMG/M
3300001471|JGI12712J15308_10011021All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae2444Open in IMG/M
3300001593|JGI12635J15846_10342765Not Available919Open in IMG/M
3300002245|JGIcombinedJ26739_100021463All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales5564Open in IMG/M
3300003505|JGIcombinedJ51221_10013235Not Available2748Open in IMG/M
3300003505|JGIcombinedJ51221_10404983Not Available553Open in IMG/M
3300004080|Ga0062385_10216078Not Available1046Open in IMG/M
3300004080|Ga0062385_10779100Not Available624Open in IMG/M
3300004082|Ga0062384_100130786Not Available1394Open in IMG/M
3300004082|Ga0062384_100262071Not Available1054Open in IMG/M
3300004091|Ga0062387_100573955Not Available803Open in IMG/M
3300004091|Ga0062387_100711391All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria737Open in IMG/M
3300004092|Ga0062389_102718731Not Available660Open in IMG/M
3300004092|Ga0062389_103207224Not Available612Open in IMG/M
3300004092|Ga0062389_103787534Not Available568Open in IMG/M
3300004152|Ga0062386_100429470Not Available1067Open in IMG/M
3300004479|Ga0062595_100541046Not Available888Open in IMG/M
3300005327|Ga0070658_10631876All Organisms → cellular organisms → Bacteria929Open in IMG/M
3300005344|Ga0070661_100572049All Organisms → cellular organisms → Bacteria911Open in IMG/M
3300005434|Ga0070709_11379414Not Available570Open in IMG/M
3300005436|Ga0070713_100939579All Organisms → cellular organisms → Bacteria833Open in IMG/M
3300005437|Ga0070710_11189496Not Available563Open in IMG/M
3300005439|Ga0070711_100320539All Organisms → cellular organisms → Bacteria1238Open in IMG/M
3300005458|Ga0070681_10441701All Organisms → cellular organisms → Bacteria1213Open in IMG/M
3300005533|Ga0070734_10700810Not Available576Open in IMG/M
3300005534|Ga0070735_10545755All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300005539|Ga0068853_100547647Not Available1096Open in IMG/M
3300005541|Ga0070733_10109992All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1766Open in IMG/M
3300005541|Ga0070733_10290414All Organisms → cellular organisms → Bacteria1079Open in IMG/M
3300005542|Ga0070732_10182718All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1251Open in IMG/M
3300005602|Ga0070762_10082922Not Available1827Open in IMG/M
3300005712|Ga0070764_10654942All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300005764|Ga0066903_103887018Not Available802Open in IMG/M
3300005921|Ga0070766_10372664Not Available930Open in IMG/M
3300006052|Ga0075029_100121133Not Available1588Open in IMG/M
3300006052|Ga0075029_100267363Not Available1084Open in IMG/M
3300006086|Ga0075019_10268805Not Available1021Open in IMG/M
3300006086|Ga0075019_10683191Not Available648Open in IMG/M
3300006175|Ga0070712_100675452All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium879Open in IMG/M
3300006176|Ga0070765_101876153All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300006893|Ga0073928_11116384Not Available533Open in IMG/M
3300006904|Ga0075424_100796895Not Available1008Open in IMG/M
3300009093|Ga0105240_10077565All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4093Open in IMG/M
3300009521|Ga0116222_1101232All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus1240Open in IMG/M
3300009633|Ga0116129_1003998All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales6918Open in IMG/M
3300009633|Ga0116129_1080794Not Available957Open in IMG/M
3300009633|Ga0116129_1102473Not Available829Open in IMG/M
3300009665|Ga0116135_1237621Not Available705Open in IMG/M
3300009698|Ga0116216_10005487All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales8121Open in IMG/M
3300010049|Ga0123356_11686557Not Available786Open in IMG/M
3300010343|Ga0074044_10082207All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2175Open in IMG/M
3300010373|Ga0134128_12694556Not Available548Open in IMG/M
3300010376|Ga0126381_103692704Not Available599Open in IMG/M
3300010379|Ga0136449_100576821All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus1925Open in IMG/M
3300010396|Ga0134126_10088652Not Available3819Open in IMG/M
3300011404|Ga0153951_1009614All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1704Open in IMG/M
3300011404|Ga0153951_1022638Not Available1074Open in IMG/M
3300011404|Ga0153951_1046523Not Available758Open in IMG/M
3300011418|Ga0153954_1002698All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales7566Open in IMG/M
3300012083|Ga0154000_1108692Not Available570Open in IMG/M
3300012154|Ga0153953_1101717Not Available514Open in IMG/M
3300012924|Ga0137413_10329713Not Available1076Open in IMG/M
3300013307|Ga0157372_11531482Not Available768Open in IMG/M
3300014160|Ga0181517_10514783Not Available604Open in IMG/M
3300014165|Ga0181523_10651244Not Available577Open in IMG/M
3300014167|Ga0181528_10800973Not Available530Open in IMG/M
3300014200|Ga0181526_10160246Not Available1442Open in IMG/M
3300014201|Ga0181537_10730457Not Available673Open in IMG/M
3300014501|Ga0182024_10647421Not Available1314Open in IMG/M
3300014657|Ga0181522_10058699Not Available2175Open in IMG/M
3300015206|Ga0167644_1011786All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4264Open in IMG/M
3300015206|Ga0167644_1028232All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2305Open in IMG/M
3300015242|Ga0137412_10132059Not Available2020Open in IMG/M
3300016341|Ga0182035_11158658Not Available689Open in IMG/M
3300017924|Ga0187820_1236922Not Available581Open in IMG/M
3300017937|Ga0187809_10298668Not Available593Open in IMG/M
3300017946|Ga0187879_10266233Not Available954Open in IMG/M
3300017946|Ga0187879_10582500All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria621Open in IMG/M
3300017970|Ga0187783_10276073All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1227Open in IMG/M
3300017993|Ga0187823_10074015Not Available977Open in IMG/M
3300018009|Ga0187884_10066938All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1630Open in IMG/M
3300018025|Ga0187885_10076714Not Available1657Open in IMG/M
3300018033|Ga0187867_10033567All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3182Open in IMG/M
3300018034|Ga0187863_10832403Not Available524Open in IMG/M
3300018037|Ga0187883_10252006Not Available903Open in IMG/M
3300018038|Ga0187855_10538245Not Available680Open in IMG/M
3300018042|Ga0187871_10437695Not Available723Open in IMG/M
3300018043|Ga0187887_10253963Not Available1041Open in IMG/M
3300018044|Ga0187890_10203900Not Available1120Open in IMG/M
3300018046|Ga0187851_10675806Not Available582Open in IMG/M
3300018085|Ga0187772_10782213Not Available688Open in IMG/M
3300020582|Ga0210395_10349236Not Available1113Open in IMG/M
3300021171|Ga0210405_10121268All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2065Open in IMG/M
3300021180|Ga0210396_11248775Not Available620Open in IMG/M
3300021402|Ga0210385_10748882All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria749Open in IMG/M
3300021405|Ga0210387_10416160Not Available1191Open in IMG/M
3300021406|Ga0210386_10746547Not Available842Open in IMG/M
3300021406|Ga0210386_11429291Not Available579Open in IMG/M
3300021433|Ga0210391_10863210Not Available707Open in IMG/M
3300021441|Ga0213871_10097905Not Available856Open in IMG/M
3300021475|Ga0210392_10191279Not Available1423Open in IMG/M
3300021478|Ga0210402_10835913Not Available847Open in IMG/M
3300021478|Ga0210402_11422438Not Available621Open in IMG/M
3300021479|Ga0210410_10772945Not Available844Open in IMG/M
3300022521|Ga0224541_1001586All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2267Open in IMG/M
3300022530|Ga0242658_1175012Not Available569Open in IMG/M
3300025463|Ga0208193_1014615Not Available2285Open in IMG/M
3300025463|Ga0208193_1052859Not Available885Open in IMG/M
3300025504|Ga0208356_1015314All Organisms → cellular organisms → Bacteria1695Open in IMG/M
3300025588|Ga0208586_1005239All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3538Open in IMG/M
3300025633|Ga0208480_1000475All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales15370Open in IMG/M
3300025913|Ga0207695_10111363All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2716Open in IMG/M
3300025928|Ga0207700_10285506Not Available1421Open in IMG/M
3300026041|Ga0207639_11275825Not Available689Open in IMG/M
3300026557|Ga0179587_11066157Not Available532Open in IMG/M
3300027117|Ga0209732_1076212Not Available584Open in IMG/M
3300027496|Ga0208987_1037819Not Available856Open in IMG/M
3300027545|Ga0209008_1017061Not Available1702Open in IMG/M
3300027684|Ga0209626_1117727All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum694Open in IMG/M
3300027698|Ga0209446_1042614Not Available1144Open in IMG/M
3300027737|Ga0209038_10018262All Organisms → cellular organisms → Bacteria2064Open in IMG/M
3300027737|Ga0209038_10028163Not Available1665Open in IMG/M
3300027768|Ga0209772_10005720All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans3274Open in IMG/M
3300027768|Ga0209772_10070211Not Available1056Open in IMG/M
3300027768|Ga0209772_10121447All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria811Open in IMG/M
3300027783|Ga0209448_10150183Not Available778Open in IMG/M
3300027824|Ga0209040_10216957Not Available981Open in IMG/M
3300027826|Ga0209060_10461910Not Available576Open in IMG/M
3300027842|Ga0209580_10502258Not Available604Open in IMG/M
3300027867|Ga0209167_10188303All Organisms → cellular organisms → Bacteria1096Open in IMG/M
3300027884|Ga0209275_10089305Not Available1558Open in IMG/M
3300027895|Ga0209624_11105019Not Available510Open in IMG/M
3300027898|Ga0209067_10274779Not Available921Open in IMG/M
3300027908|Ga0209006_10008995All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans9021Open in IMG/M
3300027908|Ga0209006_10124799All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans2271Open in IMG/M
3300027908|Ga0209006_10656449Not Available862Open in IMG/M
3300027908|Ga0209006_10958957All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria683Open in IMG/M
3300027908|Ga0209006_11259613Not Available574Open in IMG/M
3300027986|Ga0209168_10314752All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300028747|Ga0302219_10048367All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1585Open in IMG/M
3300028801|Ga0302226_10116053Not Available1182Open in IMG/M
3300028863|Ga0302218_10102248Not Available901Open in IMG/M
3300028906|Ga0308309_11491678Not Available578Open in IMG/M
3300029999|Ga0311339_10477990Not Available1274Open in IMG/M
3300030043|Ga0302306_10145569Not Available915Open in IMG/M
3300030057|Ga0302176_10348158Not Available597Open in IMG/M
3300030494|Ga0310037_10223510Not Available827Open in IMG/M
3300030503|Ga0311370_12007195All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300030509|Ga0302183_10296234Not Available625Open in IMG/M
3300030617|Ga0311356_12075007All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans501Open in IMG/M
3300030659|Ga0316363_10043642All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans2186Open in IMG/M
3300030707|Ga0310038_10106372Not Available1456Open in IMG/M
3300030872|Ga0265723_1002981Not Available869Open in IMG/M
3300030916|Ga0075386_11181393Not Available548Open in IMG/M
3300031057|Ga0170834_101374263Not Available557Open in IMG/M
3300031231|Ga0170824_108027869Not Available981Open in IMG/M
3300031231|Ga0170824_108269532Not Available541Open in IMG/M
3300031234|Ga0302325_10434909All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans2022Open in IMG/M
3300031236|Ga0302324_102770753Not Available591Open in IMG/M
3300031241|Ga0265325_10520703All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales515Open in IMG/M
3300031446|Ga0170820_16546312Not Available519Open in IMG/M
3300031446|Ga0170820_16578175Not Available1207Open in IMG/M
3300031708|Ga0310686_100470832All Organisms → cellular organisms → Bacteria10964Open in IMG/M
3300031708|Ga0310686_105033522All Organisms → cellular organisms → Bacteria2422Open in IMG/M
3300031708|Ga0310686_116698296Not Available898Open in IMG/M
3300031708|Ga0310686_117400596Not Available584Open in IMG/M
3300031708|Ga0310686_117824702Not Available1774Open in IMG/M
3300031715|Ga0307476_11059738Not Available596Open in IMG/M
3300031718|Ga0307474_10246409Not Available1368Open in IMG/M
3300031879|Ga0306919_10608061Not Available843Open in IMG/M
3300031939|Ga0308174_10138389All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans1798Open in IMG/M
3300031941|Ga0310912_10836309Not Available710Open in IMG/M
3300031962|Ga0307479_10559966Not Available1126Open in IMG/M
3300031962|Ga0307479_11020164Not Available796Open in IMG/M
3300031996|Ga0308176_10341470Not Available1474Open in IMG/M
3300032008|Ga0318562_10158721All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans1304Open in IMG/M
3300032261|Ga0306920_100542496All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans1724Open in IMG/M
3300032805|Ga0335078_10095299All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans4308Open in IMG/M
3300032893|Ga0335069_10301677Not Available1906Open in IMG/M
3300032895|Ga0335074_10043919All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia6188Open in IMG/M
3300032895|Ga0335074_10140897All Organisms → cellular organisms → Bacteria3074Open in IMG/M
3300032895|Ga0335074_10497361Not Available1267Open in IMG/M
3300032895|Ga0335074_10771234Not Available906Open in IMG/M
3300032895|Ga0335074_10969862Not Available756Open in IMG/M
3300032896|Ga0335075_10090622All Organisms → cellular organisms → Bacteria4049Open in IMG/M
3300032897|Ga0335071_10032061All Organisms → cellular organisms → Bacteria5224Open in IMG/M
3300032898|Ga0335072_10638895All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus1059Open in IMG/M
3300032898|Ga0335072_10964739Not Available788Open in IMG/M
3300032955|Ga0335076_10001905All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans20493Open in IMG/M
3300033134|Ga0335073_10135796All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3134Open in IMG/M
3300033134|Ga0335073_11973353Not Available535Open in IMG/M
3300033158|Ga0335077_11654301Not Available607Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil9.38%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil8.33%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil8.33%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil7.81%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland6.25%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa5.73%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil4.69%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog3.12%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland3.12%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.12%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil3.12%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.12%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.12%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens3.12%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.60%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.60%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.08%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.56%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.56%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.56%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.04%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil1.04%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.04%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.04%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.04%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.04%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.04%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.52%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.52%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.52%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.52%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.52%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.52%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.52%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.52%
Termite GutHost-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut0.52%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.52%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.52%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.52%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.52%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001131Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1EnvironmentalOpen in IMG/M
3300001471Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006086Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009633Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10EnvironmentalOpen in IMG/M
3300009665Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10EnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300010049Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3Host-AssociatedOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300011404Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ035 MetaGHost-AssociatedOpen in IMG/M
3300011418Attine ant fungus gardens microbial communities from Florida, USA - TSFL038 MetaGHost-AssociatedOpen in IMG/M
3300012083Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC084 MetaGHost-AssociatedOpen in IMG/M
3300012154Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ037 MetaGHost-AssociatedOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014160Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaGEnvironmentalOpen in IMG/M
3300014165Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaGEnvironmentalOpen in IMG/M
3300014167Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaGEnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300014201Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014657Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaGEnvironmentalOpen in IMG/M
3300015206Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300017924Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5EnvironmentalOpen in IMG/M
3300017937Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017993Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3EnvironmentalOpen in IMG/M
3300018009Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40EnvironmentalOpen in IMG/M
3300018025Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100EnvironmentalOpen in IMG/M
3300018033Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300018044Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10EnvironmentalOpen in IMG/M
3300018046Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10EnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021441Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1Host-AssociatedOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022521Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24EnvironmentalOpen in IMG/M
3300022530Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025463Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025504Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025588Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025633Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027117Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027496Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027684Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027698Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027737Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027768Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027783Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027824Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027826Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027986Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028747Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2EnvironmentalOpen in IMG/M
3300028801Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3EnvironmentalOpen in IMG/M
3300028863Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030043Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1EnvironmentalOpen in IMG/M
3300030057Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1EnvironmentalOpen in IMG/M
3300030494Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)EnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030509Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2EnvironmentalOpen in IMG/M
3300030617II_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030659Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)EnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300030872Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030916Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031241Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaGHost-AssociatedOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300032895Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3EnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12631J13338_101411913300001131Forest SoilWAAPMDAFIDEVVRRSIRHTRLMLTQGSYNWPVARLALRKILADLETSAPDDPSLPRLRTFIASQDRKWLREDR*
JGI12712J15308_1001102123300001471Forest SoilMDDFIDEVVRRSIRHARLMLKRGSYNWPVARLALRKILADLEADAPNDPSLPRLRAFIVSQDRKWLREDR*
JGI12635J15846_1034276523300001593Forest SoilMDAFIDQVVRRSIRHARLMLEHGSYNWPVARLALRKILADLEAGAPDDPSLPRLRAFIASQDRKWSREDR*
JGIcombinedJ26739_10002146333300002245Forest SoilMDAFIDEVVRRSIRHARLMLNQGSYNWPVARLALRKILADLEAKAANDPSLPRLRAFIASSDRKWLREDR*
JGIcombinedJ51221_1001323513300003505Forest SoilEQWAAPMDPFIDEVVRRSIRHARLMLKQGSYNWPVARLALRKILADLETSAPDDPSLPRLRAFIASNDRKWLREDR*
JGIcombinedJ51221_1040498313300003505Forest SoilMDEQWAALMDPFIDEVVRRSIRHARLMLKHGSYNWPVARLALRKILADLEAKAPDDPSLPRLRAFVASNDRKWLREDR*
Ga0062385_1021607813300004080Bog Forest SoilMDRFISLIVLRSIRHARRMLTQGAYDWPVVRRALRKILADLESRSPNDPTLPRLRAFIASNDRAWLRENPEPRSNDPRDVAEGGGS*
Ga0062385_1077910013300004080Bog Forest SoilMDRFIEQIVRRSIRHARLMLRQGSYDWPVARLALRKILADLEARSPNHPTLPRLRAFIASKDRAWL
Ga0062384_10013078623300004082Bog Forest SoilMDRFIDQIVRRSIRHARLMLRQGSYDWPVARLALRKILADLEARSPNHPTLPRLRAFIASKDRAWLRDNHFERAQRIWGAR*
Ga0062384_10026207123300004082Bog Forest SoilMDRFLDLIVRRSIRHARLMLRQDAYDWPTVRKALRKILADLESRSPNHPSLPRLRAFIASNDRAWLRKNP*
Ga0062387_10057395513300004091Bog Forest SoilMDRFIDAIVRRSIRHARLMLRQDAYDWPIVRRALRKILADLESRSPNHPGLLRLRAFIASNDRAWLRENPEIQSDVPQRCD*
Ga0062387_10071139123300004091Bog Forest SoilVRRSIRHARLMLKQGSYNWPLARLALRKILADLEAKAPDDPSLPRLRAFIASNDRKWLREGR*
Ga0062389_10271873123300004092Bog Forest SoilMDAFIDEVVRRSIRHTRLMLKQGSYNWPVARLALRKILADLETSAPDDPSLPRLRAFIASNDRKWLREDR*
Ga0062389_10320722423300004092Bog Forest SoilMDPFIDEIVRRSIRHARLMLKQGSYNWPMARLALRKILADLEARSPNHPSLPRLRAFIASRD
Ga0062389_10378753423300004092Bog Forest SoilRDVANGEAAGAAMDRFIDAIVRRSIRHARLMLRQGAYDWPTARRALRKILADLESRSPNHPSLPRLRTFIASNDRAWLRENPEIQSDAPQGRG*
Ga0062386_10042947023300004152Bog Forest SoilVADGEPAGAAMDRFISLIVLRSIRHARRMLTQGAYDWPVVRRALRKILADLESRSPNDPTLPRLRAFIASNDRAWLRENPEPRSNDPRDVAEGGGS*
Ga0062595_10054104623300004479SoilRFVIADGRAAGAAMDRFFDQIVRRSIRHAQLMLRQGSYNWPVARLALRKILSDLEARAPKDPSVPRLRAFIASKDREWLRQNR*
Ga0070658_1063187623300005327Corn RhizosphereMKRQWAVPMDAFVDEVVRRSIRHARLMLKQGSYNWPVARIALRKILADLEEKTPDHPSLQRLRAFIVSSDRAWLDESP*
Ga0070661_10057204923300005344Corn RhizosphereMDAFIDEVVRRSIRHARLMLKQGSYNWPVARIALRKILADLEEKTPDHPSLQRLRAFIVSSDRAWLDESP*
Ga0070709_1137941413300005434Corn, Switchgrass And Miscanthus RhizosphereMDPLIDEIVRRSIRHARLMLKASYNWPVAGLALRKILADLEARPPNHPTLPRLRALIASKDRAWLRENRFERAVRSA*
Ga0070713_10093957923300005436Corn, Switchgrass And Miscanthus RhizosphereMDAFIDEVVRRSIRHARLMLKHGSYNWPVARIALRKILADLEEKTPDHPSLQRLRAFIVSSDRAWLDESP*
Ga0070710_1118949623300005437Corn, Switchgrass And Miscanthus RhizosphereMDPLIDEIVRRSIRHARLMLKASYNWPVAGLALRRVLADLEARSPNHPTLPQLRALIASKDRAWLRENRFERAVRS
Ga0070711_10032053913300005439Corn, Switchgrass And Miscanthus RhizosphereMKRQWAVPMDAFIDEVVRRSIRHARLMLKHGSYNWPVARIALRKILADLEEKTPDHPSLQRLRAFIVSSDRAWLDESP*
Ga0070681_1044170123300005458Corn RhizosphereMDRFMDKIVRRSIRHARLMLREGSYNWPVARRALRKILADLEARRPDHPGLPRLRSFIASKDRAWLRENR*
Ga0070734_1070081013300005533Surface SoilGAGFAASDCGLVADGEAKGARMDRLIDLTIRRAIRHARLMLKQGSYDWPTARTALRKILADLESKSPMHPSLPRLRAFIASRDRAWLVENPQLGSRDP*
Ga0070735_1054575513300005534Surface SoilMADGKAAGAAMDPLIDEIVRRSIRHARLMLKQGSYNWPVARIALRKILADLEARAPDHPSLPRLRAFIASNDRKWLREKT*
Ga0068853_10054764713300005539Corn RhizosphereDKIVRRSIRHARLMLREGSYNWPVARRALRKILADLEARRPDHPGLPRLRSFIASKDRAWLRENR*
Ga0070733_1010999213300005541Surface SoilVADGEAAGAAMDRFIDVTVRRSIRHTRSMLRQGAYDWPTVRKALRKILADLESRSPNHPSLRRLRTFIASNDRAWLRENPEPPSNDRRGCH*
Ga0070733_1029041413300005541Surface SoilMDRVIDEIVRRSIRQARLMLKEGSYDWPVARRALRKILADLEARSPNHPGLPRLRAFIASKDRAWLRENR*
Ga0070732_1018271823300005542Surface SoilMDRVIDEIVRRSIRHARLMLKEGSYDWPVARRALRKILADLEARSPNHPGLPRLRAFIASMDRAWLRENR*
Ga0070762_1008292233300005602SoilMDDFIDEVIRRSMRHARLMLKEGAYNWPVARIALRKILADLEAKAPDHPSLRRLRAFIAQNDHAWLDENP*
Ga0070764_1065494213300005712SoilMDRFIDVIVRRSIRHARLMLRQGAYDWPTVRKALRKILADLESRSPNHPSLPRLRTFIASNDR
Ga0066903_10388701833300005764Tropical Forest SoilVFADGEAAGAAMDDRFIDEIVRRSMRHARLMLKQGSYNWPIARLALRKILADLEARAPDHPSLLRLSRFIARNDRAWLREDR*
Ga0070766_1037266423300005921SoilSSRLSPMDEQWAAPMDPFIDEVVRRSIRHARLMLKQGSYNWPVARLALRKILADLETSAPDDPSLPRLRAFIASNDRKWLREDR*
Ga0075029_10012113313300006052WatershedsMDRFIDEILRRSIRHARSMLRQGAYDWPIVRKALRRILADLESQSPNHPGLPRLRAFIASNDRAWLHENAKLPSNDPRGCP*
Ga0075029_10026736323300006052WatershedsMDRFIDLIVRRAIRHTRLMLKQGAYDWPTARKALRKILADLESQSPKDPSLLRLRAFIASRDRAWLSENPQLASR*
Ga0075019_1026880513300006086WatershedsADGEAAGAVMDRFIDEILRRSIRHARSMLRQGAYDWPIVRKALRRILADLESQSPNHPGLPRLRAFIASNDRAWLHENAKLPSNDPRGCP*
Ga0075019_1068319123300006086WatershedsMDRFIDLIVRRAIRHTRLMLKQGVYDWPTARKALRKILADLESQSPKDPSLLRLRAFIASRDRAWLSENPQLASR*
Ga0070712_10067545213300006175Corn, Switchgrass And Miscanthus RhizosphereMDPLIDEIVRRSIRHARLMLKASYNWPVAGLALRKILADLEARSPNHPTLPQLRALIASKDRAWLRENRFERAVRSA*
Ga0070765_10187615313300006176SoilMDEQWAALMDPFIDEVVRRSIRHARLMLKHGSYNWPVARLALRKILADLEAKAPDDPSLPRLRAFIASNDRKWLREDR*
Ga0073928_1111638413300006893Iron-Sulfur Acid SpringMDEQWAAPMDPFIDEVVRRSIRHARLMLKQGSYNWPVARLALRKILADLETSAPDDPSLPRLRAFIASNDRKWLREDR*
Ga0075424_10079689523300006904Populus RhizosphereMDRFIDEIVRRSIRHARLMLKEGSYDWPVARRALRKILADLEAKSPDHPGLPRLRAFIASKDRAWLRENR*
Ga0105240_1007756533300009093Corn RhizosphereMDRLIDETVRRSIRHARLMLREGSYNWPVARRALRKILADLEARSPDHPSLPRLRAFIALKDRAWLRANR*
Ga0116222_110123223300009521Peatlands SoilMDAMVDSIDEIVGRSIRHARGMLREGHYDWPTTRRALRTILADLEARSPNHPSLARLRAFIAANDRAWSREN*
Ga0116129_100399823300009633PeatlandMDAFIDEVVRRSIRHTRLMLTQGSYNWPVARLALRKILADLETSAPDDPSLPRLRTFIASQDRKWLREDR*
Ga0116129_108079423300009633PeatlandMTSTAPRLPLPVAVVADEEAAGAAMDPLIDEIVRRSIRHARLMLRQGSYNWPVARRALRKILADLEARAPDDPSLPQLRAFIASNDRAWLREKR*
Ga0116129_110247313300009633PeatlandPLIDEIVRRSIRHARLMLKQGSYNWPIARRALRKILADLEESAPDDPSLPRLRAFIASNDRAWLREKR*
Ga0116135_123762123300009665PeatlandMDRFIDVTVRRSIRHTRSMLRQGAYDWPTVRKALRKILADLESRSPNHPSLPRLRTFIASNDR
Ga0116216_1000548723300009698Peatlands SoilMDAMVDSIDEIVGRSIRHARRMLGEGHYDWPTTRRALRTILADLEARSPNHPSLARLRAFIAANDRAWSREN*
Ga0123356_1168655723300010049Termite GutDPAMTSTAPPLPLPIPGFVIADGRTAGAAMDRVIYEIVRRSIRHAQLMLKQGSYNWPVARLALRKILSDLEARAPDDPSVPRLRAFIASKDREWLRENR*
Ga0074044_1008220713300010343Bog Forest SoilMDRFIDVIVRRSIRHARLMLRQGAYDWPTVRKALRKILADLESRSPSHPGLPRLRTFIASNDRTWLDENPEL
Ga0134128_1269455623300010373Terrestrial SoilMDRVIDEIVRRSIRHARLMLKEGSYDWPVARRALRKILADLEAKSPDHPGLPRLRAFIASKDRAWLRENR*
Ga0126381_10369270423300010376Tropical Forest SoilEGAAGAAMDRFIDQIVRRSIRHAQLMLRQGSYNWPVARLALRKILSDLETRAPKDPSVPRLRAFIASKDREWLLEKR*
Ga0136449_10057682123300010379Peatlands SoilMGAMVDSIDEIVGRSIRHARRMLGEGHYDWPTTRRALKTILADLEARSPNHPSLARLRAFIAANDRAWSREN*
Ga0134126_1008865223300010396Terrestrial SoilMDRVIDEIVRRSIRHARLMLKEGSYDWPVARRALRKILADLEARSPNHPGLPRLRAFIASKDRAWLRENR*
Ga0153951_100961433300011404Attine Ant Fungus GardensVIADGRAAGAAMDRFIDQIVRRSIRHAQLMLRQGSYNWPVARLALRKILSDLEARAPEDPGVLRLRAFIASKDREWLREKR*
Ga0153951_102263823300011404Attine Ant Fungus GardensMDPLIDEIVRHSIRHARRMVGEGAYDWPTARRALMIILADLEARSPDHPSLRRLRAFIAMCDRAWSREQ*
Ga0153951_104652323300011404Attine Ant Fungus GardensLPLPIPVVADRKAAGAAMDPFIDEIVRRSIRHARLMLRQGSYNWPVARLALRKILADLEARSPDHPSLPKLRAFIASKDRAWLREHR*
Ga0153954_100269823300011418Attine Ant Fungus GardensMTSTAPGLRLPSPVVADGEAADAAMDPFIDEIVRRSIRHARLVLKENASNWPLARLALRKILADLESRSPDHPSLARLRTFIASNDKKWLRQRH*
Ga0154000_110869213300012083Attine Ant Fungus GardensRFIDQIVRRSIRHAQLLLRQGSYDWPVARLALRKILSDLEARAPEHPGVTRLRAFIASKDRGWLRDKS*
Ga0153953_110171713300012154Attine Ant Fungus GardensHSAPDWDAGAMTSTAPRLPLPVAVVAEEEAAGAAMDPLIDEIVRRSIRHARLMLRQGSYNWPVARRALRKILADLEARAPDDPSLPQLRAFIASNDRAWLREKR*
Ga0137413_1032971313300012924Vadose Zone SoilMDPFIDEIVRRSIRHARLMLKEGAYNWPVARLALRKILADLEESAPDDPSLPRLRSFIASQDRAWLRENP*
Ga0157372_1153148223300013307Corn RhizosphereRRSIRHARLMLKQGSYNWPVARIALRKILADLEEKTPDHPSLQRLRAFIVSSDRAWLDESP*
Ga0181517_1051478313300014160BogQRRHICRPSVGDVADGEAAGAAMDRFIDVTVRRSIRHTRLMLRQGAYDWATVRKALRKILADLESRSPNHPSLPRLRTFIASNDRAWLRENPEPPSNDRRGCH*
Ga0181523_1065124413300014165BogMDRFIDQILRRSIRHARSMLRQGAYDWPTVRKALRRILADLESRSPNHPSLRRLRAFIASNDRAWLRENAKLPSNDPRGCR*
Ga0181528_1080097323300014167BogLPPYVNGAALAPPVPVVADGKAAGVTMDPLIDEIVRRSIRHARLMLKEGSRHWPVARLALRKILADLESRAPDHPSLPKLRTFIAANDRKWI
Ga0181526_1016024623300014200BogCRPSVGDVADGEAAGAAMDRFINVIVRRSIRHTRSMLRQGAYDWPTVRKALRKILADLESRSPNHPSLPRLRTFIASKDRAWSRENPEPPSNDPRGCH*
Ga0181537_1073045713300014201BogLTSTAPYLPPSGGDVADGEAAGAAMDRFIDVTVRRSIRHTRLMLRQGAYDWATVRKALRKILADLESRSPNHPSLPRLRTFIASNDRAWLRENPEKQSNDPRGCH*
Ga0182024_1064742123300014501PermafrostMDPFIDEIVRRSIRHARLMSKQGSYNWPVARLALRKILADLEESAPDDPSLRRLRTFIASQDRAWLRANP*
Ga0181522_1005869933300014657BogMDRFIDVTVRRSIRHTRWMLRQGAYDWATVRKALRKILADLESRSPNHPSLPRLRAFIASNDRAWLRENPELPSNDRRGCH*
Ga0167644_101178623300015206Glacier Forefield SoilMDPFIDEIVRRSIRHARLMLKQGSYNWPVARLALRKILADLEEKKPDDPSLRRLRTFIASQDRVWLRENR*
Ga0167644_102823233300015206Glacier Forefield SoilMDPFIDEIVRRSIRHARLMLKEGAYNWPVARLALRKILADLEESAPDDPSLPRLRNFIASQDRAWLRENP*
Ga0137412_1013205923300015242Vadose Zone SoilLPLPVPVIADGKAAGAAMDPFIDEIVRRSIRHARLMLKEGAYNWPVARLALRKILADLEESAPDDPSLPRLRSFIASQDRAWLRENP*
Ga0182035_1115865823300016341SoilMGAMVDSIDEIVGRSIRHARRMLREGHYDWPTTRRALTIILADLEARSPNHPGVARLRAFLATNDRVVA
Ga0187820_123692223300017924Freshwater SedimentMDPLIDEIVRRSIRHARLMLKQGSYNWPVARIALRKILADLEARAPDHPSLPRLRAFIASNDRKWLREKT
Ga0187809_1029866813300017937Freshwater SedimentRQARLMLKEGSYDWPVARRALRKILADLEARSPNHPGLPRLRAFIASKDRAWLRENR
Ga0187879_1026623323300017946PeatlandMDRFIDVTVRRSIRHTRLMLRQGAYDWPTVRKALRKILADLESRSPNHPSLPRLRAFIASHDRAWLRENPELPSNDRRGCH
Ga0187879_1058250013300017946PeatlandSIDEIVGRSIRHARSMLGDGHYDWPTTRRALTTILADLEARSPNHPSLARLRAFIAANDRAWSREN
Ga0187783_1027607323300017970Tropical PeatlandMDDRFIDEIVHRSIRHAGLMLRQGSYNWPVARRALRKILADLEARSPSHPSLPRLRAFIARNDRAWLREKR
Ga0187823_1007401523300017993Freshwater SedimentMDRVIDEIVRRSIRQARMMLKEGSYDWPVARRALRKILADLEARSPNHPGLPRLRAFIASKDRAWLRENR
Ga0187884_1006693823300018009PeatlandMDRFIDVTVRRSIRHTRLMLRQGAYDWPTVRKALRKILADLESRSPNHPSLPRLRAFIASNDRAWLRENPELPSNDRRGCH
Ga0187885_1007671413300018025PeatlandRPSVGDVADGEAAGAAMDRFIDVTVRRSIRHTRLMLRQGAYDWPTVRKALRKILADLESRSPNHPSLPRLRAFIASNDRAWLRENPELPSNDRRGCH
Ga0187867_1003356733300018033PeatlandMDRFIDVIVRRSIRHTRSMLRQGAYDWPTVRKALRKILADLESRSPNHPSLPRLRTFIASNDRAWLRENPEPPSNDPRGCH
Ga0187863_1083240313300018034PeatlandMDRLIDVIVRRSIRHARMMLKQGAHDWPLARRALRKILADLESRAPDHASLRRLRTFIALNDRAWLRGDKETPEENPRECR
Ga0187883_1025200613300018037PeatlandMDRFIDVIVRRSIRHTRLMLRQGAYDWPTVRKALRKILADLESRSPNHPSLPRLRAFIASNDRAWLRENPELPSNDRRGCH
Ga0187855_1053824523300018038PeatlandMDRFIVVIVRRSMRHARLMLRQRVYNWPTVRRALRKILADLETRSPDHPSMPRLRAFIASNDRAWLRENPNDR
Ga0187871_1043769523300018042PeatlandRQRRRICRPSVGDVADGEAAGAAMDRFIDVTVRRSIRHTRSMLRQGAYDWPTVRKALRKILADLESRSPNHPSLPRLRAFIASNDRA
Ga0187887_1025396313300018043PeatlandMDRFIDVTVRRSIRHTRLMLRQGAYDWPTVRKALRKILADLESRSPNHPSLPRLRAFIASNDRAWLRENPEPPSNDPRGCH
Ga0187890_1020390013300018044PeatlandMDRFINVIVRRSIRHTRSMLRQGAYDWPTVRKALRKILADLESRSPNHPSLPRLRTFIASNDRAWLRENPDPPSNDPRGCH
Ga0187851_1067580623300018046PeatlandAGAAMDRFIDVTVRRSIRHTRLMLRQGAYDWPTVRKALRKILADLESRSPNHPSLPRLRAFIASNDRAWLRENPELPSNDRRGCH
Ga0187772_1078221323300018085Tropical PeatlandMGAMVDSIDEIVGRSIRHARRMLEEGHYDWPTTSKALTTILVDLEARSPNHPSLARLRAFIAANDRAWSREN
Ga0210395_1034923613300020582SoilMDRFIDVTVRRSIRHTRLMLRQGAYDWPTVRKALRKILADLESRSPNHPSLPRLRAFIASRDRAWLSDNPRLASHDLRTCR
Ga0210405_1012126833300021171SoilMDEQWAALMDPFIDEVVRRSIRHARLMLKHGSYNWPVARLALRKILADLEAKAPDDPSLPRLRAFVASNDRKWLREDR
Ga0210396_1124877513300021180SoilIRHARLMLEQGSYNWPVARLALRHILADLEARAADDPSVARLRAFIASKDREWLRENR
Ga0210385_1074888223300021402SoilWAALMDPFIDEVVRRSIRHARLMLKHGSYNWPVARLALRKILADLETSAPDDPSLPRLRAFIASNDRKWLREDR
Ga0210387_1041616013300021405SoilDEQWAAPMDPFIDEVVRRSIRHARLMLKQGSYNWPVARLALRKILADLETSAPDDPSLPRLRAFIASNDRKWLREDR
Ga0210386_1074654713300021406SoilSMRHARLMLKEGAYNWPVARIALRKILADLEAKAPDHPSLRRLRAFIAQNDHAWLDENP
Ga0210386_1142929113300021406SoilRSIRHARLMLEQGSYNWPVARLALRLILADLEARAADDPSVARLRAFIASKDREWLRENR
Ga0210391_1086321013300021433SoilGAAMDRFIDVTVRRSIRHTRSMLRQGAYDWPTVRKALRKILADLESRSPNHPSLPRLRAFIASNDRAWLRENPEPPSNDRRGCH
Ga0213871_1009790523300021441RhizosphereRAAGAAMDRFIDQIVRRAIRHAQLMLRQGSYNWPLARLALRKILSDLEARAPEDPSVQRLRAFIASKDREWLRENR
Ga0210392_1019127923300021475SoilQVIADGEQWAAPMDAFIDEVVRRSIRHTRLMLRQGSHNWPVARLALRKILADLEAKAPDDPSLPRLRSFIASTDRAWLRENR
Ga0210402_1083591313300021478SoilMDEQRAAPMDPFIDEVVRRSIRHARLMLKQGSYNWPVARLALRKILADLETSAPDDPSLPRLRAFIASNDRKWLREDR
Ga0210402_1142243813300021478SoilFIEQIVRRSIRHARLMLEQGSYNWPVARLALRHILADLEARAADDPSVARLRAFIASKDREWLRENR
Ga0210410_1077294523300021479SoilMDEQWAAPMDPFIDEVVRRSIRHARLMLKQGSYNWPVARLALRKILADLETSAPDDPSLPRLRAFIASNDRKWLREDR
Ga0224541_100158633300022521SoilMDRFIDVIVRRSIRHTRLMLRQGAYDWPTVHKALRKILADLESRSPNHPSLPRLRAFIASHDRAWLRENPELPSNDRRGCH
Ga0242658_117501213300022530SoilMDEQWAALMDPFIDEVVRRSIRHARLMLNQGSYNWPVARLALRKILADLEAKAPDDPSLPRLRAFVASNDRKWLREDR
Ga0208193_101461543300025463PeatlandPLIDEIVRRSIRHARLMLKQGSYNWPIARRALRKILADLEESAPDDPSLPRLRAFIASNDRAWLREKR
Ga0208193_105285913300025463PeatlandMDAFIDEVVRRSIRHTRLMLTQGSYNWPVARLALRKILADLETSAPDDPSLPRLRTFIASQDRKWLREDR
Ga0208356_101531413300025504Arctic Peat SoilLPLPHRGYRRWRAVGRPMDAFIDEVVRRSIRHARLMSKQGSYNWPVARLALRKILADLEAKAPDDPSLPRLRAFIASQDRKWLDEKP
Ga0208586_100523933300025588Arctic Peat SoilMDAFIDEVVRRSIRHARLVLKQGSYNWPVARLALRKILADLEAEAANDPSLPRLRAFIVSQDRKWLDEEP
Ga0208480_100047563300025633Arctic Peat SoilMDAFIDEVVRRSIRHARLVLKQGSYNWPVARLALRKILADLEAKAPDDPSLPRLRAFIVSQDRKWLDEEP
Ga0207695_1011136323300025913Corn RhizosphereMDRLIDETVRRSIRHARLMLREGSYNWPVARRALRKILADLEARSPDHPSLPRLRAFIALKDRAWLRANR
Ga0207700_1028550623300025928Corn, Switchgrass And Miscanthus RhizosphereEAAGVPMDRFIDQIVRRSMRHAQLMLKQGSYNWPLARLALRKILSDLEAKAPDDPSLARLRAFIASKDRAWVRQNRGVC
Ga0207639_1127582523300026041Corn RhizosphereRFMDKIVRRSIRHARLMLREGSYNWPVARRALRKILADLEARRPDHPGLPRLRSFIASKDRAWLRENR
Ga0179587_1106615713300026557Vadose Zone SoilPMDVFIDEVVRRSIRHARLMLKQGSYNWPVARIALRKILADLEADAPNDPSLPRLRAFIVSQDRKWLREDR
Ga0209732_107621213300027117Forest SoilMDAFINEVVRRSIRHTRLMLRQGSHNWPVARLALRKILADLETSAPDDPSLQRLRTFIASTDRAWLRENR
Ga0208987_103781913300027496Forest SoilMDPFIDEIVRRSIRHARLMLKEGAYNWPVARLALRKILADLEESAPDDPSLLRLRTFIASQDRAWLRENP
Ga0209008_101706133300027545Forest SoilMDPFIDEVVRRSIRHARLMLKQGSYNWPVARLALRKILADLETSAPDDPSLSRLRTFIASTDRAWLRENR
Ga0209626_111772723300027684Forest SoilDEVVRRSIRHARLMLKQGSYNWPVARLALRKILADLETSAPDDPSLPRLRAFIASNDRKWLREDR
Ga0209446_104261413300027698Bog Forest SoilMDRFISLIVLRSIRHARRMLTQGAYDWPVVRRALRKILADLESRSPNDPTLPRLRAFIASNDRAWLRENPEPRSNDPRGCH
Ga0209038_1001826213300027737Bog Forest SoilMDRFIDVTVRRSIRHTRLILRQGAYDWPTVRKALRKILADLESRSPNHPSLPRLRTFIASNDRAWLRG
Ga0209038_1002816323300027737Bog Forest SoilMDRFIDAIVRRSIRHARLMLRQGAYDWPTARRALRKILADLEAGAPDDPSLSRLRAFIASNDRKWLREDR
Ga0209772_1000572033300027768Bog Forest SoilMDRFIDAIVRRSIRHARLMLRQGAYDWPTARRALRKILADLESRSPNHPSLPRLRTFIASNDRAWLRGNPEAPSNDPRGCH
Ga0209772_1007021113300027768Bog Forest SoilMDAFIDEVVRRSIRHARLMLKQGSYNWPVARLALRKILADLEAGAPDDPSLPRLRTFIASTDRAWLRENR
Ga0209772_1012144713300027768Bog Forest SoilMDRFLDLIVRRSIRHARLMLRQDAYDWPTVRKALRKILADLESRSPNHPSLPRLRAFIASNDRAWLRKNP
Ga0209448_1015018313300027783Bog Forest SoilMDRFIDVTVRRSIRHTRLILRQGAYDWPTVRKALRKILADLESRAPNHPSLPRLRTFIASNDRAWLRENPEFRSNDPRGCH
Ga0209040_1021695723300027824Bog Forest SoilSVQDVADGEPAGAAMDRFISLIVLRSIRHARRMLTQGAYDWPVVRRALRKILADLESRSPNDPTLPRLRAFIASNDRAWLRENPEPRSNDPRDVAEGGGS
Ga0209060_1046191013300027826Surface SoilGAGFAASDCGLVADGEAKGARMDRLIDLTIRRAIRHARLMLKQGSYDWPTARTALRKILADLESKSPMHPSLPRLRAFIASRDRAWLVENPQLGSRDP
Ga0209580_1050225813300027842Surface SoilMDRVIDEIVRRSIRHARLMLKEGSYDWPVARRALRKILADLEARSPNHPGLPRLRAFIASKDRAWLRENR
Ga0209167_1018830323300027867Surface SoilMDRVIDEIVRRSIRQARLMLKEGSYDWPVARRALRKILADLEARSPNHPGLPRLRAFIASKDRAWLRENR
Ga0209275_1008930523300027884SoilMDDFIDEVIRRSMRHARLMLKEGAYNWPVARIALRKILADLEAKAPDHPSLRRLRAFIAQNDHAWLDENP
Ga0209624_1110501913300027895Forest SoilMDDFVDEVVRRSMRHARLMLKQDSYNWPVARLALRKILVDLEAKAPKHASLRRLRAFIASNDRAWLDKNP
Ga0209067_1027477923300027898WatershedsVMDRFIDEILRRSIRHARSMLRQGAYDWPIVRKALRRILADLESQSPNHPGLPRLRAFIASNDRAWLHENAKLPSNDPRGCP
Ga0209006_1000899543300027908Forest SoilMDDFIDEVVRRSIRHARLMLKRGSYNWPVARLALRKILADLEADAPNDPSLPRLRAFIVSQDRKWLREDR
Ga0209006_1012479913300027908Forest SoilSIRHARLMLEQGSYNWPVARLALRHILADLEARAADDPSVARLRAFIASKDREWLRENR
Ga0209006_1065644913300027908Forest SoilMDAFIDEVVRRSIRHARLMLNQGSYNWPVARLALRKILADLEAKAANDPSLPRLRAFIASSDRKWLREDR
Ga0209006_1095895723300027908Forest SoilSIRHARLMLEQGSYNWPVARLALRHILADLEARAADDPSVARLRAFIASKDREWLHENR
Ga0209006_1125961313300027908Forest SoilMDDFIDEVVRRSMRHARLMLKQGSYNWPVARLALRKILADLEAKAPKHPSLRRLRAFIVLNDRAWMDENP
Ga0209168_1031475223300027986Surface SoilMADGKAAGAAMDPLIDEIVRRSIRHARLMLKQGSYNWPVARIALRKILADLEARAPDHPSLPRLRAFIASNDRKWLREKT
Ga0302219_1004836723300028747PalsaMDRFIDVIVRRSIRHTRLMLRQGAYDWPTVRKALRKILADLESRSPNHPSLPRLRAFIASHDRAWLRENPELPSNDRRGCH
Ga0302226_1011605313300028801PalsaAMDRFIDVTVRRSIRHTRLMLRQGAYDWPTVRKALRKILADLESRSPNHPSLPRLRAFIASHDRAWLRENPELPSNDRRGCH
Ga0302218_1010224813300028863PalsaIDVIVRRSIRHTRLMLRQGAYDWPTVRKALRKILADLESRSPNHPSLPRLRAFIASHDRAWLRENPELPSNDRRGCH
Ga0308309_1149167813300028906SoilDDFIDEVIRRSMRHARLMLKEGAYNWPVARIALRKILADLEAKAPDHPSLRRLRAFIAQNDHAWLDENP
Ga0311339_1047799013300029999PalsaMDRFIDVTVRRSIRHTRLMLRQGAYDWPTVRKALRKILADLESRSPNHPSLPRLRTFIAS
Ga0302306_1014556913300030043PalsaAAGAAMDRFIDVIVRRSIRHTRLMLRQGAYDWPTVRKALRKILADLESRSPNHPSLPRLRAFIASNDRAWLRENPELPSNDRRGCH
Ga0302176_1034815813300030057PalsaMDRFIDVIVRRSIRHTRLMLRQGAYDWPTVRKALRKILADLELRSPNHPSLPRLRTFIASNDRAWLRENPEPPSNDPRGCH
Ga0310037_1022351023300030494Peatlands SoilMGAMVDSIDEIVGRSIRHARRMLGEGHYDWPTTRRALRTILADLEARSPNHPSLARLRAFIAANDRAWSREN
Ga0311370_1200719523300030503PalsaMDDFVDEVIRRSMRHARLMLKQDSCDWPVARIALRKILADLEAKAPKHPSLRRLRAFIVLNDR
Ga0302183_1029623413300030509PalsaDVTVRRSIRHTRLMLRQGAYDWPTVRKALRKILADLESRSPNHPSLPRLRAFIASHDRAWLRENPELPSNDRRGCH
Ga0311356_1207500713300030617PalsaQVVFDGQAADAAMDPFIDEIVRRSIRHARLMLKQGSYNWPVARIALRKILADLEERAPNDPSLARLRTFIVSQDRAWLRENP
Ga0316363_1004364213300030659Peatlands SoilVDSIDEIVGRSIRHARSMLRERHYDWPTTRRALRTILADLEARSPNHPSLARLRAFIAANDRAWSREN
Ga0310038_1010637213300030707Peatlands SoilMDAMVDSIDEIVGRSIRHARGMLREGHYDWPTTRRALRTILADLEARSPNHPSLARLRAFIAANDRAWSREN
Ga0265723_100298113300030872SoilMDRFIDQIVRRAIHHARLMLKQGSHNWPVARLALRQILADLEARSPDHPSLPRLRAFIASKDREWLRENR
Ga0075386_1118139313300030916SoilMDPFIDEIVRRSIRHARLMLKQGSYNWPVAGLALRKILADLEARSPNHPSLPQLRAFIALKDRAWLRENRLERGAR
Ga0170834_10137426313300031057Forest SoilAYPVVVVNGEAAGAAMDRVIDQIVRRSIRHARLMLREGSYNWPVARLALRKILADLEAKSPNHPSLPLLRSFIASKDRAWLKENR
Ga0170824_10802786913300031231Forest SoilEVVRRSIRHARLMLKQGSYNWPVARLALRKILADLEADAPNDPSLPRLRAFIASNDRKWLREDR
Ga0170824_10826953213300031231Forest SoilMDPFIDAIVRRSIRHARLMLKQGSYNWPVAGLALRKILADLEARSPNHPSLPRLRAFIASKDRAWLRENR
Ga0302325_1043490933300031234PalsaVRRSIRHTRLMLRQGAYDWPTVRKALRKILADLESRSPNHPSLPRLRAFIASHDRAWLRENPELPSNDRRGCH
Ga0302324_10277075323300031236PalsaMDDFVDEVIRRSMRHARLMLKQDSCDWPVARIALRKILADLEAKAPKHPSLRRLRAFIVLNDRAWTDESP
Ga0265325_1052070323300031241RhizosphereKAAGVTMDPLIDEIVRRSIRHARLMLKEGSHQWPVARLALRKILADLESRAPDHPSLPKLRTFIVSNDRKWAREQQ
Ga0170820_1654631213300031446Forest SoilMDPFIDAIVRRSIRHARLMLKQGSYNWPVAGLALRKILADLEARSPNHPSLPQLRAFIASKDRAWSREK
Ga0170820_1657817513300031446Forest SoilRRSIRHARLMLKQGSYNWPVARLALRKILADLEAKAPDDPSLPRLRAFIASNDRKWLRED
Ga0310686_10047083233300031708SoilMDPFIDEVVRRSIRHARLMLKQGSYNWPVARLALRKILADLEAKAPDDPSLPRLRAFIASNDRKWLREDR
Ga0310686_10503352223300031708SoilMDRFIDVTVRLSIRHTRSMLRQGAYDWPTVRKALRKILADLESRSPNHPSLPRLRAFIASNDRAWLRENPELPSNDRRGCH
Ga0310686_11669829623300031708SoilTSTAPRLPLPVPVVADGKAAGAAMDPFIDEIVRRSIRHARLMLKEGAYNWPVARLALRRILADLEESAPDDPSLRRLRTFIVSQDRAWLRANP
Ga0310686_11740059613300031708SoilVEFDSVGKDAKGAMVDSIDEIVRRSVRHARRMLGEGHYDWPTTRRALRIILADLEARSPDHASLERLRTFIAANDRAWLREN
Ga0310686_11782470213300031708SoilMDPFIDKIVRRSIRHARLMLKQGAYNWPVARLALRKILADLEEKAPDDPSVRRLHTFIASQDRAWLRENP
Ga0307476_1105973813300031715Hardwood Forest SoilMPVAVVADEEAAGAAMDPLIDEIVRRSIRHARLMLRQGSYDWPVARRALRKILADLEARAPDDPSVLRLHAFIASNDRAWLREKR
Ga0307474_1024640943300031718Hardwood Forest SoilMDRFIEQIVRRSIRHARLMLRQGSYDWPVARLALRKILADLEARSPNHPSLPRLRAFIASKDRAWLRENRFERAQCIWG
Ga0306919_1060806113300031879SoilSIDEIVGRSIRHARRMLREGHYDWPTTRRALTIILADLEARSPNHPGVARLRAFLATNDRAWSREN
Ga0308174_1013838913300031939SoilMDRVIDQIVRRSIRHTQVLLKQGSYEWPVARRALRKILSDLEARTPDDPSLARLRAFIALKDRAWLRENPSIC
Ga0310912_1083630923300031941SoilMDAMVDSIDEIVGRSIRHARRMLREGHYDWPTTRRALTIILADLEARSPNHPGVARLRAFLATNDRAWSREN
Ga0307479_1055996633300031962Hardwood Forest SoilEAAGAAMDRFIDQIVRRSIRHSRLMLRQGSFNWPVARLALRKILADLEARSPNHPSLPRLRAFIASKDRAWLRENRFERAQRIWGAR
Ga0307479_1102016413300031962Hardwood Forest SoilMDRFIDQIVRRSIRHARLMLRQGSYNWPVARLALRKILADLEARAPNHPSLPRLRAFIASKDRAWLRENR
Ga0308176_1034147023300031996SoilMDRVIDQIVRRSIRHTQVLLKQGSYEWPVARRALRKILSDLEARTPGDPSLARLRAFIAVKDRAWLRENPSIC
Ga0318562_1015872123300032008SoilDERAAGTGMDRFIDAIIRRSIRHARLMLRQRAYEWPTARKALRKILADLEARSPDHPSLPRLRMFIASNDRAWAGENPERRSNDSRRSP
Ga0306920_10054249623300032261SoilMDAMVDSIDEIVGRSIRHARRMLREGHYDWPTTRRALSIILADLEARSPNHPGVARLRAFLATNDRAWSREN
Ga0335078_1009529923300032805SoilMDGFIDAVVRRSIRHARLMQRQCAYDWPTARRALMKILADLESKSPNHPSLARLRAFIAAKDRAWLRENPGLSANAPPGDR
Ga0335069_1030167733300032893SoilRVDVTGAGFADSDCTHVAEGEAARAMDRFIDAIVRRSIRHARLMQRQGVYEWPTLRRALRRILADLESRSPDHPSLPRLRAFIASKDRAWLRTRREVPTKAPPQDC
Ga0335074_1004391943300032895SoilMDPLIDQIVRRSIRHARLMLKQGSYNWPVARIALRKILADLEARAPNHPSLPRLRAFIASNDRKWLREKT
Ga0335074_1014089723300032895SoilMDPLIDEIVRRSIRHARLMLKQGSYNWPVARIALRKILADLEARAADHPSLPRLRAFIASNDRKWLREKT
Ga0335074_1049736123300032895SoilMDPLIDEIVRRSIRHARLMLKQGAYNWPVARIALRKILADLEARAPDHPSLPRLRAFIASNDRKWLREKT
Ga0335074_1077123413300032895SoilMATDCFIDEIVRHSIRHTRRMLGEGVYDWSTAREALMRILADLEARSPNHPSLPRLRAFIASRDRVQAREHC
Ga0335074_1096986223300032895SoilMDPFIDEVVQRSIRHARRMLRQGAYDWPVARRALRKILADLEANAPDHPSLPRLRAFIASNDRKWLRMNR
Ga0335075_1009062223300032896SoilMDPLIDEIVRRSIRHARLMLRQGSYNWPVARIALRKILADLEARAPDHPSLPRLRAFIASNDRKWLREKT
Ga0335071_1003206133300032897SoilMDRFIDAIVRRSIRHARLMQRQGVYEWPTLRRALRRILADLESRSPDHPSLPRLRAFIASKDRAWLRTRREVPTKTPPQDC
Ga0335072_1063889523300032898SoilMDRFIDVIVRRSIRYARLMQRQGAYDWPTARRALRKILADLESRSRNHPSLPRLRAFIASKDRAWLRENPELPPNAPPEDR
Ga0335072_1096473913300032898SoilTPSSRLADGKAAGAAMDPLIDEIVRRSIRHARLMLRQGSYNWPVARIALRKILADLEARAPDHPSLPRLRAFIASNDRKWLREKT
Ga0335076_1000190523300032955SoilMDGFIDTVVRRSIRHARLMQRQGHDWPTARLAMRKILADLESRSPNHPSLPRLRAFIASKDRGWLRENPKLPANASPRDC
Ga0335073_1013579633300033134SoilMDRFIDVIVRRSIRYARLMQRQGAYEWPIARRALRKILADLESRSPNHPTLRSLRAFIASKDRAWLRENPGLPPDAPREDR
Ga0335073_1197335323300033134SoilLPPPLPGYGRGKAAGAAMDPLIDEIVRRSIRHARLMLKQGSYNWPVARIALRKILADLEARAADHPSLPRLRAFIASNDRKWLREKT
Ga0335077_1165430113300033158SoilGDAMDRFIDVIVRRSIRHARLMLRQGAYDWPTVRRALRKILADLESRSPNHPSLRRLRTYVASNDRAWLRENPELPSDPPRGR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.