Metagenome / Metatranscriptome Family F024300

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F024300
Family Type	Metagenome / Metatranscriptome
Number of Sequences	206
Average Sequence Length	49 residues
Representative Sequence	MRRILLIVTAVLLVLVLSVAVAGCRKSSGNKGGGGYLPAPTSTVPATAVA
Number of Associated Samples	89
Number of Associated Scaffolds	206

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.36 %
% of genes near scaffold ends (potentially truncated)	26.70 %
% of genes from short scaffolds (< 2000 bps)	89.32 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.825 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere (25.243 % of family members)
Environment Ontology (ENVO)	Unclassified (31.553 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (35.922 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 30.77% β-sheet: 0.00% Coil/Unstructured: 69.23%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 206 Family Scaffolds
PF12728	HTH_17	8.25
PF03640	Lipoprotein_15	7.77
PF09622	DUF2391	1.94
PF07498	Rho_N	1.46
PF13546	DDE_5	1.46
PF02518	HATPase_c	1.46
PF08327	AHSA1	0.97
PF00211	Guanylate_cyc	0.97
PF00248	Aldo_ket_red	0.97
PF13419	HAD_2	0.97
PF00756	Esterase	0.49
PF02604	PhdYeFM_antitox	0.49
PF13847	Methyltransf_31	0.49
PF12802	MarR_2	0.49
PF08751	TrwC	0.49
PF13610	DDE_Tnp_IS240	0.49
PF00903	Glyoxalase	0.49
PF01636	APH	0.49
PF01243	Putative_PNPOx	0.49
PF02652	Lactate_perm	0.49
PF13565	HTH_32	0.49
PF13302	Acetyltransf_3	0.49
PF04264	YceI	0.49
PF00872	Transposase_mut	0.49
PF13581	HATPase_c_2	0.49
PF08139	LPAM_1	0.49
PF01638	HxlR	0.49
PF03631	Virul_fac_BrkB	0.49
PF13384	HTH_23	0.49
PF03706	LPG_synthase_TM	0.49
PF13683	rve_3	0.49
PF00690	Cation_ATPase_N	0.49
PF02687	FtsX	0.49
PF07690	MFS_1	0.49
PF01544	CorA	0.49
PF03725	RNase_PH_C	0.49
PF10103	Zincin_2	0.49
PF01476	LysM	0.49

COG ID	Name	Functional Category	% Frequency in 206 Family Scaffolds
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	7.77
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.97
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.49
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	0.49
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.49
COG0689	Ribonuclease PH	Translation, ribosomal structure and biogenesis [J]	0.49
COG1185	Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	Translation, ribosomal structure and biogenesis [J]	0.49
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.49
COG1620	L-lactate permease	Energy production and conversion [C]	0.49
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.49
COG2123	Exosome complex RNA-binding protein Rrp42, RNase PH superfamily	Intracellular trafficking, secretion, and vesicular transport [U]	0.49
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.49
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.49
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.49
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.49

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.83 %
All Organisms	root	All Organisms	44.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.83 %
cellular organisms	root	All Organisms → cellular organisms	44.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.83 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	29.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	21.84 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.49 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.49 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10.19 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.49 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.49 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.49 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.83 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.88 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.49 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.49 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	0.49 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.49 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.49 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.49 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.49 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.83 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.88 %
Actinospicaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae	0.49 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.49 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.49 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.49 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.49 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	0.49 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.49 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.83 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.88 %
Actinospica	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica	0.49 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	0.49 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.49 %
Streptosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium	0.49 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.49 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.49 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.49 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.83 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.88 %
Kribbella soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella soli	0.49 %
Frankia asymbiotica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia asymbiotica	0.49 %
unclassified Actinospica	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → unclassified Actinospica	0.49 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	0.49 %
Streptosporangium roseum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium roseum	0.49 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.49 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.49 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.83 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.88 %
Actinospica sp. MGRD01-02	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → unclassified Actinospica → Actinospica sp. MGRD01-02	0.49 %
Kribbella soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella soli	0.49 %
Frankia asymbiotica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia asymbiotica	0.49 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	0.49 %
Streptosporangium roseum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium roseum	0.49 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.49 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.49 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.49 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2065487018\|GPINP_F5MS3JC02G3JGU	Not Available	513	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig575961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	798	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_13630008	Not Available	547	Open in IMG/M
3300000550\|F24TB_10443503	Not Available	641	Open in IMG/M
3300000956\|JGI10216J12902_101987425	Not Available	941	Open in IMG/M
3300000956\|JGI10216J12902_106958055	Not Available	1226	Open in IMG/M
3300003373\|JGI25407J50210_10039045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1218	Open in IMG/M
3300004016\|Ga0058689_10129988	Not Available	562	Open in IMG/M
3300004016\|Ga0058689_10162541	Not Available	523	Open in IMG/M
3300005457\|Ga0070662_100417171	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300005562\|Ga0058697_10047666	Not Available	1632	Open in IMG/M
3300005562\|Ga0058697_10062433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1459	Open in IMG/M
3300005562\|Ga0058697_10082610	Not Available	1299	Open in IMG/M
3300005562\|Ga0058697_10114641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1136	Open in IMG/M
3300005562\|Ga0058697_10157917	Not Available	996	Open in IMG/M
3300005562\|Ga0058697_10285613	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300005562\|Ga0058697_10298226	Not Available	768	Open in IMG/M
3300005562\|Ga0058697_10391892	Not Available	686	Open in IMG/M
3300005985\|Ga0081539_10098283	Not Available	1497	Open in IMG/M
3300006618\|Ga0101566_10808113	Not Available	536	Open in IMG/M
3300009147\|Ga0114129_10382584	All Organisms → cellular organisms → Bacteria	1858	Open in IMG/M
3300009156\|Ga0111538_10981607	Not Available	1069	Open in IMG/M
3300009789\|Ga0126307_10900064	Not Available	715	Open in IMG/M
3300009789\|Ga0126307_11017332	Not Available	670	Open in IMG/M
3300009789\|Ga0126307_11521204	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300009840\|Ga0126313_10002637	All Organisms → cellular organisms → Bacteria	10125	Open in IMG/M
3300009840\|Ga0126313_10033263	All Organisms → cellular organisms → Bacteria	3551	Open in IMG/M
3300009840\|Ga0126313_10070505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2511	Open in IMG/M
3300009840\|Ga0126313_10098405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2147	Open in IMG/M
3300009840\|Ga0126313_10104947	All Organisms → cellular organisms → Bacteria	2084	Open in IMG/M
3300009840\|Ga0126313_10110972	All Organisms → cellular organisms → Bacteria	2030	Open in IMG/M
3300009840\|Ga0126313_10119169	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1962	Open in IMG/M
3300009840\|Ga0126313_10289383	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1279	Open in IMG/M
3300009840\|Ga0126313_10373666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium roseum	1127	Open in IMG/M
3300009840\|Ga0126313_10448292	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300009840\|Ga0126313_11647066	Not Available	535	Open in IMG/M
3300010037\|Ga0126304_11229598	Not Available	514	Open in IMG/M
3300010037\|Ga0126304_11277021	Not Available	503	Open in IMG/M
3300010038\|Ga0126315_10013799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	3905	Open in IMG/M
3300010038\|Ga0126315_10051276	All Organisms → cellular organisms → Bacteria	2240	Open in IMG/M
3300010038\|Ga0126315_10079001	All Organisms → cellular organisms → Bacteria	1849	Open in IMG/M
3300010038\|Ga0126315_10224167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1140	Open in IMG/M
3300010038\|Ga0126315_10231845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1121	Open in IMG/M
3300010038\|Ga0126315_10409689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	853	Open in IMG/M
3300010038\|Ga0126315_10593263	Not Available	715	Open in IMG/M
3300010038\|Ga0126315_10924963	Not Available	581	Open in IMG/M
3300010039\|Ga0126309_10241543	Not Available	1019	Open in IMG/M
3300010040\|Ga0126308_10087006	All Organisms → cellular organisms → Bacteria	1891	Open in IMG/M
3300010040\|Ga0126308_10380701	Not Available	939	Open in IMG/M
3300010040\|Ga0126308_10442463	Not Available	872	Open in IMG/M
3300010040\|Ga0126308_11043047	Not Available	574	Open in IMG/M
3300010040\|Ga0126308_11213906	Not Available	534	Open in IMG/M
3300010041\|Ga0126312_10023749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4092	Open in IMG/M
3300010041\|Ga0126312_10278799	Not Available	1177	Open in IMG/M
3300010041\|Ga0126312_10790097	Not Available	688	Open in IMG/M
3300010042\|Ga0126314_10089209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2078	Open in IMG/M
3300010042\|Ga0126314_10789551	Not Available	699	Open in IMG/M
3300010044\|Ga0126310_10497719	Not Available	890	Open in IMG/M
3300010044\|Ga0126310_10659923	Not Available	788	Open in IMG/M
3300010044\|Ga0126310_11359755	Not Available	577	Open in IMG/M
3300010044\|Ga0126310_11827843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	507	Open in IMG/M
3300010045\|Ga0126311_10392271	Not Available	1067	Open in IMG/M
3300010145\|Ga0126321_1101908	Not Available	508	Open in IMG/M
3300010166\|Ga0126306_10521730	Not Available	941	Open in IMG/M
3300010166\|Ga0126306_10615949	All Organisms → cellular organisms → Bacteria → Terrabacteria group	866	Open in IMG/M
3300010166\|Ga0126306_10635116	Not Available	853	Open in IMG/M
3300010166\|Ga0126306_11239135	Not Available	614	Open in IMG/M
3300010320\|Ga0134109_10417662	Not Available	539	Open in IMG/M
3300010999\|Ga0138505_100006849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1225	Open in IMG/M
3300012358\|Ga0137368_10841359	Not Available	564	Open in IMG/M
3300012409\|Ga0134045_1047898	Not Available	515	Open in IMG/M
3300013306\|Ga0163162_11568243	Not Available	751	Open in IMG/M
3300014487\|Ga0182000_10050383	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300014487\|Ga0182000_10080248	Not Available	1051	Open in IMG/M
3300014487\|Ga0182000_10100319	Not Available	970	Open in IMG/M
3300014487\|Ga0182000_10215825	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300014487\|Ga0182000_10229659	Not Available	731	Open in IMG/M
3300014487\|Ga0182000_10331764	Not Available	648	Open in IMG/M
3300014487\|Ga0182000_10401293	Not Available	608	Open in IMG/M
3300014487\|Ga0182000_10480656	Not Available	572	Open in IMG/M
3300014487\|Ga0182000_10580747	Not Available	537	Open in IMG/M
3300014497\|Ga0182008_10894974	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300017965\|Ga0190266_10253549	Not Available	884	Open in IMG/M
3300017965\|Ga0190266_10430849	Not Available	743	Open in IMG/M
3300018027\|Ga0184605_10077116	Not Available	1449	Open in IMG/M
3300018054\|Ga0184621_10205777	Not Available	705	Open in IMG/M
3300018056\|Ga0184623_10048043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1945	Open in IMG/M
3300018066\|Ga0184617_1055812	Not Available	1017	Open in IMG/M
3300018078\|Ga0184612_10494414	Not Available	599	Open in IMG/M
3300018081\|Ga0184625_10465432	Not Available	646	Open in IMG/M
3300018432\|Ga0190275_10811691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1000	Open in IMG/M
3300018466\|Ga0190268_11115143	Not Available	644	Open in IMG/M
3300018466\|Ga0190268_12013449	Not Available	531	Open in IMG/M
3300018476\|Ga0190274_10301597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1491	Open in IMG/M
3300018476\|Ga0190274_12839965	Not Available	580	Open in IMG/M
3300018482\|Ga0066669_12113507	Not Available	531	Open in IMG/M
3300019767\|Ga0190267_10166725	Not Available	986	Open in IMG/M
3300019767\|Ga0190267_11438300	Not Available	526	Open in IMG/M
3300019867\|Ga0193704_1063631	Not Available	703	Open in IMG/M
3300019869\|Ga0193705_1072041	Not Available	680	Open in IMG/M
3300021078\|Ga0210381_10013414	All Organisms → cellular organisms → Bacteria	2043	Open in IMG/M
3300022694\|Ga0222623_10010572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3352	Open in IMG/M
3300022756\|Ga0222622_10939987	Not Available	634	Open in IMG/M
3300025933\|Ga0207706_10177530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1871	Open in IMG/M
3300025972\|Ga0207668_10977144	Not Available	756	Open in IMG/M
3300026670\|Ga0208216_102613	Not Available	655	Open in IMG/M
3300027718\|Ga0209795_10054188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella soli	1210	Open in IMG/M
3300027718\|Ga0209795_10070303	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1027	Open in IMG/M
3300027718\|Ga0209795_10140345	Not Available	683	Open in IMG/M
3300027718\|Ga0209795_10151262	All Organisms → cellular organisms → Bacteria → Terrabacteria group	655	Open in IMG/M
3300027718\|Ga0209795_10157834	All Organisms → cellular organisms → Bacteria → Terrabacteria group	639	Open in IMG/M
3300027750\|Ga0209461_10023195	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300027750\|Ga0209461_10097685	Not Available	663	Open in IMG/M
3300027750\|Ga0209461_10145864	Not Available	572	Open in IMG/M
3300027809\|Ga0209574_10049879	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300027809\|Ga0209574_10115996	Not Available	780	Open in IMG/M
3300027809\|Ga0209574_10170897	Not Available	677	Open in IMG/M
3300028705\|Ga0307276_10186022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	542	Open in IMG/M
3300028707\|Ga0307291_1109623	Not Available	691	Open in IMG/M
3300028719\|Ga0307301_10003160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4621	Open in IMG/M
3300028720\|Ga0307317_10023581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia asymbiotica	1893	Open in IMG/M
3300028720\|Ga0307317_10052586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1307	Open in IMG/M
3300028722\|Ga0307319_10058423	Not Available	1215	Open in IMG/M
3300028722\|Ga0307319_10246890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	587	Open in IMG/M
3300028744\|Ga0307318_10284904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	578	Open in IMG/M
3300028771\|Ga0307320_10089059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1166	Open in IMG/M
3300028771\|Ga0307320_10123614	Not Available	992	Open in IMG/M
3300028793\|Ga0307299_10102676	Not Available	1069	Open in IMG/M
3300028793\|Ga0307299_10189726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	773	Open in IMG/M
3300028819\|Ga0307296_10270065	Not Available	926	Open in IMG/M
3300028875\|Ga0307289_10036957	Not Available	1935	Open in IMG/M
3300028876\|Ga0307286_10123659	Not Available	918	Open in IMG/M
3300028878\|Ga0307278_10000666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	16903	Open in IMG/M
3300028878\|Ga0307278_10017179	All Organisms → cellular organisms → Bacteria	3355	Open in IMG/M
3300028880\|Ga0307300_10199367	Not Available	648	Open in IMG/M
3300030496\|Ga0268240_10052048	Not Available	880	Open in IMG/M
3300030496\|Ga0268240_10135480	Not Available	599	Open in IMG/M
3300030510\|Ga0268243_1009320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1793	Open in IMG/M
3300030510\|Ga0268243_1033939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1060	Open in IMG/M
3300030510\|Ga0268243_1056688	Not Available	857	Open in IMG/M
3300030510\|Ga0268243_1101146	Not Available	669	Open in IMG/M
3300030514\|Ga0268253_10028483	Not Available	1369	Open in IMG/M
3300030516\|Ga0268255_10050109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1346	Open in IMG/M
3300030516\|Ga0268255_10097770	Not Available	886	Open in IMG/M
3300030516\|Ga0268255_10162395	All Organisms → cellular organisms → Bacteria → Terrabacteria group	652	Open in IMG/M
3300031421\|Ga0308194_10347646	Not Available	527	Open in IMG/M
3300031548\|Ga0307408_100007578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7174	Open in IMG/M
3300031548\|Ga0307408_100375497	Not Available	1214	Open in IMG/M
3300031548\|Ga0307408_100634497	Not Available	953	Open in IMG/M
3300031548\|Ga0307408_100978998	Not Available	778	Open in IMG/M
3300031548\|Ga0307408_100994784	Not Available	773	Open in IMG/M
3300031548\|Ga0307408_101212073	All Organisms → cellular organisms → Bacteria → Terrabacteria group	704	Open in IMG/M
3300031548\|Ga0307408_101573806	Not Available	623	Open in IMG/M
3300031548\|Ga0307408_102448111	Not Available	507	Open in IMG/M
3300031731\|Ga0307405_10012635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4481	Open in IMG/M
3300031731\|Ga0307405_10025655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3387	Open in IMG/M
3300031731\|Ga0307405_10045259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2695	Open in IMG/M
3300031731\|Ga0307405_10210102	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1420	Open in IMG/M
3300031731\|Ga0307405_10348628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1141	Open in IMG/M
3300031731\|Ga0307405_10394464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1081	Open in IMG/M
3300031731\|Ga0307405_10508083	Not Available	967	Open in IMG/M
3300031731\|Ga0307405_10612947	Not Available	890	Open in IMG/M
3300031731\|Ga0307405_11314451	Not Available	629	Open in IMG/M
3300031740\|Ga0307468_101832042	Not Available	576	Open in IMG/M
3300031824\|Ga0307413_10331600	Not Available	1166	Open in IMG/M
3300031824\|Ga0307413_10700512	Not Available	841	Open in IMG/M
3300031824\|Ga0307413_10824394	All Organisms → cellular organisms → Bacteria → Terrabacteria group	782	Open in IMG/M
3300031852\|Ga0307410_10089954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2176	Open in IMG/M
3300031852\|Ga0307410_10672188	Not Available	870	Open in IMG/M
3300031852\|Ga0307410_10946926	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300031852\|Ga0307410_11743790	Not Available	552	Open in IMG/M
3300031901\|Ga0307406_10129503	Not Available	1769	Open in IMG/M
3300031901\|Ga0307406_10174981	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300031901\|Ga0307406_10232938	Not Available	1376	Open in IMG/M
3300031901\|Ga0307406_10308796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1218	Open in IMG/M
3300031901\|Ga0307406_10321274	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1197	Open in IMG/M
3300031901\|Ga0307406_11283038	Not Available	638	Open in IMG/M
3300031903\|Ga0307407_11097012	Not Available	618	Open in IMG/M
3300031911\|Ga0307412_10165944	All Organisms → cellular organisms → Bacteria	1646	Open in IMG/M
3300031995\|Ga0307409_100268654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1569	Open in IMG/M
3300031995\|Ga0307409_100928069	Not Available	885	Open in IMG/M
3300031995\|Ga0307409_101041705	Not Available	838	Open in IMG/M
3300031995\|Ga0307409_102336360	Not Available	564	Open in IMG/M
3300031995\|Ga0307409_102478519	Not Available	547	Open in IMG/M
3300031996\|Ga0308176_11634768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	687	Open in IMG/M
3300032002\|Ga0307416_100376940	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300032002\|Ga0307416_100586663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → unclassified Actinospica → Actinospica sp. MGRD01-02	1193	Open in IMG/M
3300032002\|Ga0307416_100947586	All Organisms → cellular organisms → Bacteria → Terrabacteria group	962	Open in IMG/M
3300032002\|Ga0307416_101170167	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300032002\|Ga0307416_102587141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300032002\|Ga0307416_103118282	Not Available	554	Open in IMG/M
3300032004\|Ga0307414_10045077	All Organisms → cellular organisms → Bacteria	3017	Open in IMG/M
3300032004\|Ga0307414_11742006	Not Available	581	Open in IMG/M
3300032005\|Ga0307411_11349881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300032013\|Ga0310906_11334052	Not Available	525	Open in IMG/M
3300032126\|Ga0307415_100081714	All Organisms → cellular organisms → Bacteria	2309	Open in IMG/M
3300032126\|Ga0307415_100125323	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1934	Open in IMG/M
3300032126\|Ga0307415_100635873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	954	Open in IMG/M
3300032126\|Ga0307415_101317982	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300032126\|Ga0307415_101580970	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300032126\|Ga0307415_102045304	Not Available	558	Open in IMG/M
3300032159\|Ga0268251_10041794	Not Available	1470	Open in IMG/M
3300032159\|Ga0268251_10153959	Not Available	869	Open in IMG/M
3300032159\|Ga0268251_10297692	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300032159\|Ga0268251_10474339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	555	Open in IMG/M
3300032159\|Ga0268251_10475291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	555	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	55.83%
Host-Associated	Host-Associated	44.17%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.97%
Plants	Host-Associated → Plants	44.17%
Aquatic	Environmental → Aquatic	4.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.16%
Phylloplane	Host-Associated → Plants → Phylloplane	12.14%
Sediment	Environmental → Aquatic → Sediment	3.88%
Phyllosphere	Host-Associated → Plants → Phyllosphere	2.43%
Freshwater	Environmental → Aquatic → Freshwater	0.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.97%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.49%
Roots	Host-Associated → Plants → Roots	0.49%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	26.70%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	12.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.88%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	2.43%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.46%
Loam	Environmental → Terrestrial → Soil → Loam	0.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.97%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.49%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.49%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.49%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.49%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	26.70%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	12.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.91%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	2.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.46%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.97%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.97%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.49%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.49%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.49%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.49%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.49%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	25.24%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	21.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.05%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	12.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.28%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.43%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	2.43%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.97%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.49%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.49%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.49%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.49%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.49%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.49%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.49%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.49%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.49%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006618	Soil microbial communities from the Leymus chinensis steppe, China - without N addition	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026670	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1111 (SPAdes)	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030514	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030516	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPINP_03488660	2065487018	Soil	MRRILFVVIAVLLVLVLSLAVAGCRKSSGKKGGGGGYLPAP
KansclcFeb2_16012000	2124908045	Soil	MRRILFVVIAVLLVLVLSVAVAGCRKSSGKKGGGGGYLPAPTRAVPAVIA
ICChiseqgaiiFebDRAFT_136300082	3300000363	Soil	MRRILLVVTAVLFVLMLSFAVAGCRKSSENKGGGYLPAPRSTELTAVV*
F24TB_104435032	3300000550	Soil	MRRILYIVTAVLLVLVLSFAVAGCRKSSGDNGGGGGYLPAPTSTVPAASA*
JGI10216J12902_1019874251	3300000956	Soil	MRRILFIVTAVLLVLVLSFAMTGCRKSSGNKGGGGYLPAPTSTVPTASA*
JGI10216J12902_1069580552	3300000956	Soil	MRRILLVVTAVLLVLVLSVAVAGCRKSSGKKGGGGYLPAPTRSSASAALVA*
JGI25407J50210_100390451	3300003373	Tabebuia Heterophylla Rhizosphere	MRRILFVVTAVLLVLMLSFAVAGCRKSSGNKGGGGGYLPAPTRTVQTASA*
Ga0058689_101299882	3300004016	Agave	MTRMLLIATVILLVLVLGVTVAGCRKSSGSKGGYLPAPRGTVPAASA*
Ga0058689_101625411	3300004016	Agave	MRQILLIVTAVLLVLVLSVAVAGCRKSSGKKGGGGYLPAPTTSTVPATAVA*
Ga0070662_1004171713	3300005457	Corn Rhizosphere	MRRIMLVVTVVLFVLMLSFAVVGCRKSSENKGGGYLPAPRSTELTAVV*
Ga0058697_100476663	3300005562	Agave	MRRILFVVIAVLLVLVLSFALDGCRKSSGKKGGGGGYLPAPTRAVPAAMA*
Ga0058697_100624332	3300005562	Agave	MRRILLIVTAVLLVLVLSFALASCRKSSGKKGGGGGYLPAPTRTSVPATAAA*
Ga0058697_100826102	3300005562	Agave	MRRILLIVTAVLLVVVLSFALAGCRKSSGNKGGGGYLPAPTRTSVLATAVA*
Ga0058697_101146412	3300005562	Agave	MTRILLIATVILLVLVLGVAVAGCRKSSGSKGGYLPAPRGTVPAADA*
Ga0058697_101579172	3300005562	Agave	MTRMLLIATVILLVLVLGVAVAGCRKSSGSKGGYLPAPRGTVPAASA*
Ga0058697_102856131	3300005562	Agave	MTRILLVATAILLVLVLGVAAAGCRKSSDNKGGGGYLPASGSTVAAADA*
Ga0058697_102982263	3300005562	Agave	ILLVLVLGVAAAGCRKSSGNKGGGYLPAPMSTAPAADA*
Ga0058697_103918921	3300005562	Agave	MRRILYIVTAVLLVLVLSFAVAGCRKSSGDNGGGGGYLPAPTSIVPAASA*
Ga0081539_100982832	3300005985	Tabebuia Heterophylla Rhizosphere	MRRILLIVTAVLLVLVISVAVAGCRKSSGKKGGGYLPTPTSTVPMTAVA*
Ga0101566_108081132	3300006618	Soil	MRRILFVVIAVLLVLVLSLAVAGCRKSSGKKGGGGYLPAPTTSTVPATAIA*
Ga0114129_103825843	3300009147	Populus Rhizosphere	MTRILLVAIAILLVLVLGVAVAGCRKSSGNKGGGGYLPAPGSTVPAADA*
Ga0111538_109816072	3300009156	Populus Rhizosphere	MRRIVLVVTVVLFVLMLSFAVVGCRKSSENKGGGYLPAPRSTELTAVV*
Ga0126307_109000642	3300009789	Serpentine Soil	MRRILFVVIAVLLVLVLSFAVAGCRKSSGKKGGGGGYLPASTSAVPAAIA*
Ga0126307_110173321	3300009789	Serpentine Soil	MRRILLIVTAVLLVLVLSVAVAGCRKSSGNKGGGGYLPAPTSTVPATAVA*
Ga0126307_115212041	3300009789	Serpentine Soil	MTRILLVATAILLVLVLGVAAAGCRKSSGNKGGRGYLPAPGSTVAAANA*
Ga0126313_1000263711	3300009840	Serpentine Soil	MTRILLVATAILLVLVLGVAAAGCRKSSGSKGGGYLPAPGSTVAAADA*
Ga0126313_100332632	3300009840	Serpentine Soil	MTRILLIATVILLVLVLGVAAAGCRKSSGSKGGGGYLPAPGGTVPAASA*
Ga0126313_100705053	3300009840	Serpentine Soil	MRRILFVVTALLLVLVLSFAVAGCRKSSGKKGGGGGYLPAPRSSVSAAVA*
Ga0126313_100984053	3300009840	Serpentine Soil	MRRILLIVTAVLLVLVLSVAVAGCRKSSGKKGGGGGYLPAPTTSSVPATAVA*
Ga0126313_101049472	3300009840	Serpentine Soil	MTRILLIATVILLVLVLGLAVAGCRKSSGSKGGGYLPAPRGTVPAASA*
Ga0126313_101109722	3300009840	Serpentine Soil	MRRILLIVTAVLLILVLSVAVAGCRKSSGNKGGGGYLPAPTNGSLLT*
Ga0126313_101191691	3300009840	Serpentine Soil	MRRILLIVTAVLLVLVLSVAVAGCRKSSGNKGGGGGYLPAPTSTVPATAVA*
Ga0126313_102893832	3300009840	Serpentine Soil	MRRILFVVIAVLLVLVLSLAVAGCRKSSGKKGGGGGYLPAPTSAVPAAIA*
Ga0126313_103736661	3300009840	Serpentine Soil	MRRTLLVVTAVLLVLMLSFAVTGCRKSSGNKGGGGYLPAPRNTELTALA*
Ga0126313_104482922	3300009840	Serpentine Soil	MRRILLVVTAVLLVLVLSFALTGCRKSSGKKGGGGYLPAPRSTVSTAVA*
Ga0126313_116470661	3300009840	Serpentine Soil	MTRILLIATVILLVLVLGVGVAGCRKSGGSKGGGYLPAPGGTVPAASA*
Ga0126304_112295981	3300010037	Serpentine Soil	MRRILFVVIAVLLVLVLSFAVAGCRKSSGKKGGGGGYLPAPTSAVPAAIA*
Ga0126304_112770211	3300010037	Serpentine Soil	MRRILFVVTAVLLVLVLSFAVAGCRKSSGNKGGGYLPAPTRTMQTASA*
Ga0126315_100137994	3300010038	Serpentine Soil	MRRILLIVTAVLLVVMLSFALAGCRKSSGNKGGGGYLPAPTRTSVLATAVA*
Ga0126315_100512762	3300010038	Serpentine Soil	MTRILLIATVILLVLVLGVAVAGCRKSSGSKGGGGYLPAPRGAVPAASA*
Ga0126315_100790012	3300010038	Serpentine Soil	MTRILLIATVILLVLVLGVAVTGCRKSSGSKGGGYLPAPRGTVPAASA*
Ga0126315_102241672	3300010038	Serpentine Soil	MRRLLYIVTAVLLVLVLSFAVAGCRKSSGNNGGGGGYLPAPTRTVPTASA*
Ga0126315_102318451	3300010038	Serpentine Soil	MRRILLIVTAVLLILVLSVAVAGCRKSSGNKGGGGYLPAPTKSSVPATAVA*
Ga0126315_104096892	3300010038	Serpentine Soil	VTAVLLVLVLSFAVAGCRKSSGNKGGGGGYLPAPTRTVPTASA*
Ga0126315_105932631	3300010038	Serpentine Soil	MEIGTRRWAMRRILFVVTAVLLVLVLSFAVAGCRKSSGNKGGGGYLPAPTRTVQTASA*
Ga0126315_109249631	3300010038	Serpentine Soil	TAVLLVLVLSFAVAGCRKSSGNKGGGGGYLPAPTRTVQTASA*
Ga0126309_102415431	3300010039	Serpentine Soil	MRQILLIVTAVLLVLVLSVAVAGCRKSSGNKGGGGGYLPAPTRTVQTASA*
Ga0126308_100870062	3300010040	Serpentine Soil	MRRILLIVTAVMLVLVLSVAVAGCRKSSGNKGGGGYLPAPTSTVPATAVA*
Ga0126308_103807011	3300010040	Serpentine Soil	MRRILYIVIAVLLVLVLSFAVAGCRKSSGDNGGGGGYLPAPTSTVPAASA*
Ga0126308_104424632	3300010040	Serpentine Soil	MEIGTRRWAMRRILFVVTAVLLVLVLSFAVAGCRKSSGNKGGGYLPAPTRTVQTASA*
Ga0126308_110430472	3300010040	Serpentine Soil	MRRILFVVIAVLLVLVVSFAVAGCRKSSGKKGGGGGYLPAPTSAVPAAIA*
Ga0126308_112139061	3300010040	Serpentine Soil	QANLLIVTAVLLVLVLSVAVAGCRKSSGKKGGGGGYLPAPTTSSVPATAVA*
Ga0126312_100237492	3300010041	Serpentine Soil	MRRILLMVTAVLLVLVLSVAVAGCRKSSGKKGGGGGYLPAPTTSSVPATAVA*
Ga0126312_102787992	3300010041	Serpentine Soil	RRILFVVTAVLLVLVLSFAVAGCRKSSGNKGGGGYLPAPTTTVPTASA*
Ga0126312_107900971	3300010041	Serpentine Soil	MEIGTRRWAMRRILFVVTAVLLVLVLSFAVAGCRKSSGNKDGGYLPAPTRTVQTASA*
Ga0126314_100892095	3300010042	Serpentine Soil	LIVTAVLLVLVLSVAVAGCRKSSGKKGGGGGYLPAPTTSSVPATAVA*
Ga0126314_107895511	3300010042	Serpentine Soil	MEIGTRKWAMRRILFVVTAVLLVLVLSFAVAGCRKSSGNKGGGGGYLPAPTRTVQ
Ga0126310_104977191	3300010044	Serpentine Soil	AVLLVLVLSVAVASCRKSSGKKGGGGYLPAPTTSTVPATAVA*
Ga0126310_106599231	3300010044	Serpentine Soil	MEIGTRRWAMRRILFVVTAVLLVLVLSFAVVGCRKSSGNKGGGGGYLPAPTRTVQTASA*
Ga0126310_113597552	3300010044	Serpentine Soil	MRRILLIVTAVLLILVLSVAVAGCRKSSGNKGGGGYLPAPTTTSVPATAVA*
Ga0126310_118278432	3300010044	Serpentine Soil	LVLVLGFAVAGCRKSSGDNGGRGGYLPAPTSTVPAASA*
Ga0126311_103922712	3300010045	Serpentine Soil	MRRILFVVTAVLLVLVLSFAVAGCRKSSGNKGGGGGYLPAPTRTVQTASA*
Ga0126321_11019081	3300010145	Soil	MRRILYIVTAVLLVLVLSFAVAGCRKSSGKKGGGGGYLPAPTSAVPAAIA*
Ga0126306_105217302	3300010166	Serpentine Soil	MTRILLIATTVLLVLVLGVAVAGCRKSSGSKGGGYLPAPRGTVPAASA*
Ga0126306_106159491	3300010166	Serpentine Soil	MLFVVIAVLLVLVLSLAVAGCRKSSGNKGGGGGYLPAPTSAVPAAIA*
Ga0126306_106351161	3300010166	Serpentine Soil	MEIGTRRWAMRRILFVVTAVLLVLMLSFAVAGCRKSSGNKGDGGGYLPAPTSTVPTVSA*
Ga0126306_112391351	3300010166	Serpentine Soil	IVTAVLLVLVLGFAVAACRKSSGDNGGGGGYLPAPTSTVPGASA*
Ga0134109_104176621	3300010320	Grasslands Soil	MRRILFVVTAVLLVLVLSFALVGCRKSSGKKGGGGYLPAPTSTVPATAVA*
Ga0138505_1000068491	3300010999	Soil	MRRTLLVVTAVLLVLMLSFAVTGCRKSSENKGGGGGYLPAPRSTELTAVA*
Ga0137368_108413591	3300012358	Vadose Zone Soil	MRRILFVVTAVLLVLVLSFAVAGCRKSSGKKGGGGYLPAPTSTVPAAIA*
Ga0134045_10478981	3300012409	Grasslands Soil	AVLLVLVLSFALVGCRKSSGKKGGGGYLPAPRSSVPAAVA*
Ga0163162_115682433	3300013306	Switchgrass Rhizosphere	MLVVTVVLFVLMLSFAVVGCRKSSENKGGGYLPAPRSTELTAVV*
Ga0182000_100503832	3300014487	Soil	MTRILLVAIAILLVLVLGVAVAGCRKSSGSKGGGYLPAPMSTVPAADA*
Ga0182000_100802481	3300014487	Soil	MRRILLIVTAVLLVLVLSFALAGCRKSSGNKGGGGGYLPAPTRTSVPATAVV*
Ga0182000_101003192	3300014487	Soil	MARILLIATVILLVLVLGLGVAGCRKSSGSKGGGYLPAPRGTVPAASA*
Ga0182000_102158252	3300014487	Soil	MTRILLIATVILLVFVLGVAVAGCRKSSGSQGGYLPAPGGAVPAARA*
Ga0182000_102296591	3300014487	Soil	MRRILLIVTAVLLVLVLSFALASCRKSSGKKGGGGGYLPAPTTTSVPATAVA*
Ga0182000_103317641	3300014487	Soil	MTRILLIVTVILLVLVLGVAVAGCRKSSGSKGGGGYLPAPRSTVPAASA*
Ga0182000_104012932	3300014487	Soil	ARILLIATVILLVLVLGVAAAGCRKSSGSKGGGYLPAPRGTVPAASA*
Ga0182000_104806562	3300014487	Soil	MRQILLIVTAVLLVLVLSVAVAGCRKSSGKKGGGGYLPAPTASTVPATAVA*
Ga0182000_105807471	3300014487	Soil	MRRILYIVTAVLLVLVLSVAVAGCRKSSGDNGGGGGYLRAPTSTVPAASA*
Ga0182008_108949741	3300014497	Rhizosphere	MTRILLIATAVLLVLVLGVGVAGCRKSSGSKGGGYLPAPRSTVPAAGA*
Ga0190266_102535492	3300017965	Soil	MRRILFIVTAVLLVLVLSFAVAGCRKSSGDNGGGGGYLPAPTSTVPAASA
Ga0190266_104308491	3300017965	Soil	MTRILLIATAVLLVLVLGVAVAGCRKSSGNKGGGGYLPAPRGTVPAASA
Ga0184605_100771163	3300018027	Groundwater Sediment	MRRTLLVVTAVLLVLMLSFAVTGCRKSSENKGGGGGYLPAPRSTERTAVA
Ga0184621_102057771	3300018054	Groundwater Sediment	MRRILLVVTAVLLILMLSFAVTGCRKSSGNKGGGYLPAPRNTELTAPA
Ga0184623_100480433	3300018056	Groundwater Sediment	MQRILVVVTAVLLVLVLSFAVAGCRKSSGKKGGGGYLPAPRSSAPAAVA
Ga0184617_10558123	3300018066	Groundwater Sediment	MRRTLLVVTAVLLVLMLSFAVTGCRKSSENKGGGGGYLPAPRSTELTAVA
Ga0184612_104944141	3300018078	Groundwater Sediment	MRRILLVVTAVLLILMLSFAVTGCRKSSGNKGGGGYLPAPRSTELTAVL
Ga0184625_104654322	3300018081	Groundwater Sediment	MRRILYIVTAVLLVLVLSFAVAGCRKSSGNKDGGYLPAPTRTVQTASA
Ga0190275_108116912	3300018432	Soil	VVTAVLLVLVLSFAVAGCRKSSGNKGGGGYLPAPTRTVQTASA
Ga0190268_111151431	3300018466	Soil	MRRILFIVTAILLVLVLSFALTGCRKSSGKKGGGGGYLPAPTRTSVPATAVA
Ga0190268_120134491	3300018466	Soil	MRRILFVVTAVLLVLVLSFAVAGCRKSSGNKGGGGGYLPAPTRTVQTASA
Ga0190274_103015972	3300018476	Soil	MRRILYIVTAVLLVLVLGFAVAACRKSSGDNGGGGGYLPAPTSTVPAASA
Ga0190274_128399652	3300018476	Soil	MRRILFVVTAVLLVLVLSFAVAGCRKSSGNKDGGGYLPAPTSTVPTASA
Ga0066669_121135071	3300018482	Grasslands Soil	MRRILFVVTAVLLVLVLSFALVGCRKSSGKKGGGGYLPAPRSSVPAAVA
Ga0190267_101667252	3300019767	Soil	MRRILYIVTAVLLVLVLSFAVAGCRKSSGDNGGGGSYLPAPTSTVPAVSA
Ga0190267_114383002	3300019767	Soil	VTAVLLVLVLSFAVAGYRKSSGNKGGGYLPAPTRTVQTASV
Ga0193704_10636311	3300019867	Soil	MRRILLVVTAVLLILMLSFAVTGCRKSSDNKGGGGYLPAPRSTELTAVA
Ga0193705_10720411	3300019869	Soil	MRRTLLVVTAVLLVLMLSFAVTGCRKSSDNKGGGGYLPAPRSTELTAVA
Ga0210381_100134143	3300021078	Groundwater Sediment	MRRILLVVTAVLLILMLSFAVTGCRKSSGNKGGGGYLPAPRSTELTAVAYYSNRRS
Ga0222623_100105725	3300022694	Groundwater Sediment	MRRILYIVTAVLLVLVLGFAVAACRKSSGDNGGGGGYLPAPTSTVPAASV
Ga0222622_109399871	3300022756	Groundwater Sediment	MRRILFIVTAVLLVLVLSFAVAGCRKSSGNKDGGYLPAPTRTVQTASA
Ga0207706_101775303	3300025933	Corn Rhizosphere	MRRIMLVVTVVLFVLMLSFAVVGCRKSSENKGGGYLPAPRSTELTAVV
Ga0207668_109771442	3300025972	Switchgrass Rhizosphere	MRRIMLVVTVVLFVVMLSFAVVGCRKSSENKGGGYLPAPRSTELTAVV
Ga0208216_1026131	3300026670	Soil	MRRILYIVTAVLLVLVLSFAVAGCRKSSGDNGGGGSYLPAPTSTVPAASA
Ga0209795_100541882	3300027718	Agave	MRRILFVVIAVLLVLVLSFAVAGCRKSSGKKGGGGGYLPAPTSAVPAAIA
Ga0209795_100703032	3300027718	Agave	MRRILLIVTAVLFVLVLSFALAGCRKSSGKKGGGGYLPAPTRTFVPATAVA
Ga0209795_101403452	3300027718	Agave	MRRILYIVTAVLLVLVLSFAVAGCRKSSGDNGGGGGYLPAPTSTVPAASA
Ga0209795_101512622	3300027718	Agave	FVVIAVLLVLVLSFAVAGCRKSSGKNGGGGGYLPAPTRAVPAVIA
Ga0209795_101578342	3300027718	Agave	MTRILLIATAVLLVLVLGVAGCRKSSGSKGGGYLPAPRSTVPAAGA
Ga0209461_100231952	3300027750	Agave	MRRILYIVTAVLLVLVLSFAVAGCRKSSGDNGGGGGYLPAPTSIVPAASA
Ga0209461_100976852	3300027750	Agave	MRQILLIVTAVLLVLVLSVAVAGCRKSSGKKGGGGYLPAPTTSTVPATAVA
Ga0209461_101458641	3300027750	Agave	MTRILLIATVILLVLVLGVAVAGCRKSSGSKGGGYLPAPRGTVPAASA
Ga0209574_100498792	3300027809	Agave	MTRILLIATVILLVLVLGVAVAGCRKSSGSKGGGGYLPAPRSAVPAASA
Ga0209574_101159961	3300027809	Agave	MARILLIATVILLVLVLGVAAAGCRKSSGSKGGGYLPAPRGTVPAASA
Ga0209574_101708971	3300027809	Agave	MTRILLIATAVLLVLVLGVAVAGCRKSSGSKGGGYLPAPTGTVPAASA
Ga0307276_101860222	3300028705	Soil	MRRILYIVTAVLLVLVLSFAVAGCRKSSGDNGGGGGYLPAPTSTVSAASA
Ga0307291_11096231	3300028707	Soil	ATRSLAMRRTLLVVTAVLLVLMLSFAVTGCRKSSDNKGGGGYLPAPRSTELTAVA
Ga0307301_100031606	3300028719	Soil	MRRILYIVTAVLLVLVLSFAVAGCRKSRGDNGGGGGYLPAPTSTVPAASV
Ga0307317_100235811	3300028720	Soil	MRRTLLVLTAVLLVLMLSFAVTGCRKSSGNKGGGGYLPAPRSTELTAVAYYSNRR
Ga0307317_100525863	3300028720	Soil	AVLLILMLSFAVTGCRKSSGNKGGGGYLPAPRSTELTAVAYYSNRRS
Ga0307319_100584232	3300028722	Soil	AMRRILLVVTAVLLILMLSFAVTGCRKSSDNKGGGGYLPAPRSTELTAVA
Ga0307319_102468902	3300028722	Soil	LLVLVLSFAVAGCRKSSGDNGGGGGYLPAPTSTVPAASV
Ga0307318_102849042	3300028744	Soil	LLVVTAVLLVLMLSFAVTGCRKSSGNKGGGGGYLPAPRSTELTAVAYYSNRRS
Ga0307320_100890592	3300028771	Soil	MRRILFVVIAVLLVLVLSFAVAGCRKSSGKKGGGGGGYLPAPTSAVPAAIA
Ga0307320_101236143	3300028771	Soil	TAVLLVLMLSFAVTGCRKSSENKGGGGGYLPAPRSTERTAVA
Ga0307299_101026761	3300028793	Soil	VVTAVLLVLMLSFAVTGCRKSSDNKGGGGYLPAPRSTELTAVA
Ga0307299_101897262	3300028793	Soil	LYIVTAVLLVLVLGFAVAACRKSSGDNGGGGGYLPAPTSTVPAASV
Ga0307296_102700651	3300028819	Soil	VLMLSFAVTGCRKSSENKGGGGGYLPAPRSTERTAVA
Ga0307289_100369573	3300028875	Soil	MRRILYIVTAVLLVLVLGFAVAACRKSSGDNGGGGGYLPAPTSTVPAAS
Ga0307286_101236591	3300028876	Soil	MRRILFVVTAVLLVLVLSFAVAGCRKSSGNKDGGYLPAPTRTVQTASA
Ga0307278_1000066615	3300028878	Soil	MTRILLIATVILLVLVLGVAVAGCRKSSGSKGGGGYLPAPGDTVPAAGA
Ga0307278_100171792	3300028878	Soil	MRRILLIVTAVLLVLVLSVAVAGCRKSSGKKGGGGGYLPAPTTSSVPATAVA
Ga0307300_101993671	3300028880	Soil	MRRTLLVVTAVLLVLMLSFAVTGCRKSSGNKGGGGYLPAPRSTERTAVA
Ga0268240_100520481	3300030496	Soil	LVLSVAVAGCRKSSGDNGGGGGYLPAPTSTVPAASA
Ga0268240_101354802	3300030496	Soil	MTRILLVATAILLVLVLGVAAAGCRKSSDNKGGGGYLPAPGSTVAAADA
Ga0268243_10093202	3300030510	Soil	MRRILLIVTAVLLVLMLSFALAGCRKSSGNKGGGGGYLPAPTRASVLVF
Ga0268243_10339392	3300030510	Soil	MRRILLIVTAVLLVLVLSFALAGCRKSSGNKGGGGGYLPAPTRTSVPATAVV
Ga0268243_10566881	3300030510	Soil	VMTRILLVAIAILLVLVLGVAVAGCRKSSDNKGGGGYLPASGSTVAAADA
Ga0268243_11011461	3300030510	Soil	MTRILLVAIAILLVLVLGVAVAGCRKSSGSKGGGYLPAPMSTVPAADA
Ga0268253_100284831	3300030514	Agave	MRRILLIVTAVLFVLVLSFALAGCRKSSGNKGGGGGYLPAPTRTSVLATAVA
Ga0268255_100501092	3300030516	Agave	MTRILLIATAVLLVLVLGVAVAGCRKSSGSKGGGGYLPAPRGTVPAASA
Ga0268255_100977701	3300030516	Agave	MRQILLIVTAVLLVLVLSVAVAGCRKSSGKKGGGGGYLPAPTTSTVPATAVA
Ga0268255_101623951	3300030516	Agave	VVIAVLLVLVLSFALVGCRKSSGKKGGGGGYLPAPTRAVPAVIA
Ga0308194_103476461	3300031421	Soil	MRRTLLVVTAVLLILMLSFAVTGCRKSSGNKGGGGYLPAPRSTELTAVA
Ga0307408_1000075781	3300031548	Rhizosphere	MRRILYIVIAVLLVLVLSFAVAGCRKSSGDNGGGGGYLPAPTSTVPAASA
Ga0307408_1003754971	3300031548	Rhizosphere	MRRIMFVVIAVLLILVLSFAVAGCRKSSGKKGGGGGYLPAPTSTVPAAIA
Ga0307408_1006344971	3300031548	Rhizosphere	RILLIVTAVLLILVLSVAVAGCRKSSGNKGGGGYLPAPTTTSVPATAVA
Ga0307408_1009789982	3300031548	Rhizosphere	MRRILLIVTAVMLVLVLSVAVAGCRKSSGNKGGGGYLPAPTSTVPATAVA
Ga0307408_1009947841	3300031548	Rhizosphere	MTRILLIATVILLVLVLGVAAAGCRKSSGSKGGGYLPAPGSTVAAADA
Ga0307408_1012120731	3300031548	Rhizosphere	MRRILLVVIAVLLVLVLSFAVAGCRKSSGNKGGGGGYLPAPTSAVPAAIV
Ga0307408_1015738061	3300031548	Rhizosphere	IVTAVLLVLVLSFAMTGCRKSSGNKGGGGYLPAPTSTVPTAIA
Ga0307408_1024481111	3300031548	Rhizosphere	TRRCAMRRILLIVTAVLLVVMLSFALAGCRKSSGNKGGGGYLPAPTRTSVLATAVA
Ga0307405_100126353	3300031731	Rhizosphere	MTRILLVATAILLVLVLGVAAAGCRKSSGSKGGGYLPAPGSTVAAADA
Ga0307405_100256559	3300031731	Rhizosphere	MRRILFVVTAVLLVLVLSFAVAGCRKSSGNKGGGGYLPAP
Ga0307405_100452591	3300031731	Rhizosphere	RRILLIVTAVLLILVLSVAVAGCRKSSGNKGGGGYLPAPTKSSVPATAVA
Ga0307405_102101022	3300031731	Rhizosphere	MTRILLIATVILLVLVLGVAAAGCRKSSGSKGGGGYLPAPGGTVPAASA
Ga0307405_103486281	3300031731	Rhizosphere	MRRILLIVTAVLLVVMLSFALAGCRKSSGNKGGGGYLPAPTRTSVLATAVA
Ga0307405_103944641	3300031731	Rhizosphere	IAVLLVLVLSFAVAGCRKSSGDNGGGGGYLPAPTSTVPAASA
Ga0307405_105080831	3300031731	Rhizosphere	MRRTLLVVTAVLLVLMLSFAVTGCRKSSGNKGGGGYLPAPRNTELTALA
Ga0307405_106129472	3300031731	Rhizosphere	MRRILLVVTAVLLVLVLSFALTGCRKSSGKKGGGGYLPAPRSTVSTAVA
Ga0307405_113144511	3300031731	Rhizosphere	MRRILFVVTAVLLVLMLSFAVAGCRKSSGNKGDGGGYLPAPTSTVPTVSA
Ga0307468_1018320422	3300031740	Hardwood Forest Soil	MRRILLVVTVVLFVLMLSFAVVGCRKSSENKGGGYLPAPRSTELTAVV
Ga0307413_103316001	3300031824	Rhizosphere	MRRILFVVTAVLLVLVLSFAVAGCRKSSGNKGGGGYLPAPTRTVQTASA
Ga0307413_107005122	3300031824	Rhizosphere	MRRILLIVTAVLLVLVLSVAVAGCRKSSGNKGGGGYLPAPTSTVPATAVA
Ga0307413_108243942	3300031824	Rhizosphere	MTRILLIATVILLVLVLGVAVAGCRKSSGSKGGGYLPAPMSTVPAADA
Ga0307410_100899542	3300031852	Rhizosphere	MRRILLIVTAVLLILVLSVAVAGCRKSSGNKGGGGYLPAPTSTVPATAVA
Ga0307410_106721881	3300031852	Rhizosphere	RILLIVTAVLLILVLSVAVAGCRKSSGNKGGGGYLPAPTKSSVPATAVA
Ga0307410_109469262	3300031852	Rhizosphere	MTRILLIATVILLVLVLGVGVAGCRKSGGSKGGGYLPAPGGTVPAASA
Ga0307410_117437901	3300031852	Rhizosphere	LFVVTAVLLVLMLSFAVAGCRKSSGNKGDGGGYLPAPTSTVPTVSA
Ga0307406_101295035	3300031901	Rhizosphere	MRRILFVATAVLLVLVLSFAVAGCRKSSGNKGGGGGYLPAPTRTVQTASA
Ga0307406_101749811	3300031901	Rhizosphere	MTRILLIATVILLVLVLGVAAAGCRKGRRSKGGGGYLPAPGGTVPAASA
Ga0307406_102329381	3300031901	Rhizosphere	MRRILLIVTAVLLILVLSVAVAGCRKSSGNKGGGGYLPAPTKSSVPATAVA
Ga0307406_103087961	3300031901	Rhizosphere	MRRILFVVIAVLLVLVLSFAVAGCRKSSGKKGGGGGYLPAPTSAV
Ga0307406_103212742	3300031901	Rhizosphere	ILFVVIAVLLVLVLSFAVAGCRKSSGKKGGGGGYLPAPTSAVPAAIA
Ga0307406_112830381	3300031901	Rhizosphere	IGTRRWAMRRILFVVTAVLLVLVLSFAVAGCRKSSGNKGGGGYLPAPTRTVQTASA
Ga0307407_110970121	3300031903	Rhizosphere	MRRILFVVTAVLLVLVLSFAVTGCRKSSGNKGGGGGYLPAPTRTVQTASA
Ga0307412_101659442	3300031911	Rhizosphere	MRRILLIVTAVLLILVLSVAVAGCRKSSGNKGGGGYLPAPTTTSVPATAVA
Ga0307409_1002686543	3300031995	Rhizosphere	LYIVTAVLLVLVLGFAVAACRKSSGDNGGGGGYLPAPTSTVPAASA
Ga0307409_1009280691	3300031995	Rhizosphere	MRRTLLVVTAVLLVLMLSFAVTGCRKSSGNKGGGGYLPAPRNT
Ga0307409_1010417051	3300031995	Rhizosphere	LRRILFIVTAVLLVLVLSFAMTGCRKSSGNKGGGGYLPAPTSTVPTASA
Ga0307409_1023363602	3300031995	Rhizosphere	MTRVLLIATIILLVFVLGVAVAGCRKSSGSKGGGGYLPAPMSTVPAASA
Ga0307409_1024785192	3300031995	Rhizosphere	MRRILLVVIAVLLVLVLSFAVAGCRKSSGKKGGGGGYLPAPTSAVPAAIV
Ga0308176_116347682	3300031996	Soil	MRRILYIVTAVLLVLVLSFAVAGCRKSSGDNGGGGGYLPAQTSTVPAASA
Ga0307416_1003769401	3300032002	Rhizosphere	MTRILLIATVILLVLVLGLAVAGCRKSSGSKGGGYLPAPRGTVPAASA
Ga0307416_1005866632	3300032002	Rhizosphere	MTRVLLIATIILLVLVLGVAVAGCRKSSGSKGGGGYLPAPMSTVPAASA
Ga0307416_1009475861	3300032002	Rhizosphere	IVTAVLLVLVLSVAVAGCRKSSGNKGGGGYLPAPTSTVPATAVA
Ga0307416_1011701671	3300032002	Rhizosphere	VGETATRRWTMRRILLVVTAVLLVLVLSFALTGCRKSSGKKGGGGYLPAPRSTVSTAVA
Ga0307416_1025871411	3300032002	Rhizosphere	AVLLVLVLSFAVAGCRKSSGNKGGGGGYLPAPTRTVPTASA
Ga0307416_1031182821	3300032002	Rhizosphere	RRILLVVTAVLLVLVLSFAVAGCRKSSGNKGGGGGYLPAPTRTVPTASA
Ga0307414_100450773	3300032004	Rhizosphere	MRRILFVVTAVLLVLVLSFAVAGCRKSSGNKGGGGGYLPAPTRTVPTASA
Ga0307414_117420061	3300032004	Rhizosphere	MRRILLIVTAVLLVVMLSFALAGCRKSSGNKGGGGYLPAPTRTSVL
Ga0307411_113498812	3300032005	Rhizosphere	TRILLIATVILLVLVLGLAVAGCRKSSGSKGGGYLPAPRGTVPAASA
Ga0310906_113340522	3300032013	Soil	MRRIVLVVTVVLFVLMLSFAVVGCRKSSENKGGGYLPAPRSTELTAVV
Ga0307415_1000817141	3300032126	Rhizosphere	LFVVTAVLLVLVLSFAVAGCRKSSGNKGGGGGYLPAPTRTVPTASA
Ga0307415_1001253231	3300032126	Rhizosphere	LLIVTAVMLVLVLSVAVAGCRKSSGNKGGGGYLPAPTSTVPATAVA
Ga0307415_1006358731	3300032126	Rhizosphere	MRRILLIVTAVLLILVLSVAVAGCRKSSGNKGGGGYLPAPTTSSVPATAVA
Ga0307415_1013179821	3300032126	Rhizosphere	MTRILLVATAILLVLVLGVAAAGCRKSSGNKGGGYVPAPMSTVPAADA
Ga0307415_1015809701	3300032126	Rhizosphere	MTRILLIATVILLVLVLGVAVTGCRKSSGSKGGGYLPAPRGTVPAASA
Ga0307415_1020453041	3300032126	Rhizosphere	MTRILLIATVILLVLVLGVAVAGCRKSSGSKGGGGYLPAPRGAVPAASA
Ga0268251_100417943	3300032159	Agave	MRRILFVVIAVLLVLVLSFALDGCRKSSGKKGGGGGYLPAPTRAVPTAMA
Ga0268251_101539592	3300032159	Agave	MTRMLLIATVILLVLVLGVAVAGCRKSSGSKGGYLPAPRGTVPAASA
Ga0268251_102976922	3300032159	Agave	MTRILLVATAILLVLVLGVAAAGCRKSSDNKGGGGYLPASGSTVAAADA
Ga0268251_104743391	3300032159	Agave	ILDIVTAVLLVLVLSFAVAGCRKSSGDNGGGGGYLPAPTSTVPAASA
Ga0268251_104752911	3300032159	Agave	LVLVLSFAVAGCRKSSGDNGGGGGYLPAPTSTVPAASA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F024300

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences