NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F023495

Metagenome Family F023495

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F023495
Family Type Metagenome
Number of Sequences 209
Average Sequence Length 48 residues
Representative Sequence MIEGFGVGEEGASLEILELSNSAAAGKVKLELWNDVMEKEYPRRNYL
Number of Associated Samples 4
Number of Associated Scaffolds 209

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 4
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Roots → Unclassified → Unclassified → Root
(97.608 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(100.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 48.00%    β-sheet: 0.00%    Coil/Unstructured: 52.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 209 Family Scaffolds
PF10536PMD 33.49
PF13456RVT_3 0.48
PF03732Retrotrans_gag 0.48


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
RootHost-Associated → Plants → Roots → Unclassified → Unclassified → Root97.61%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.39%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300014486Endophyte microbial communities from Sorghum bicolor roots, Mead, Nebraska, USA - 072115-40_1 MetaGHost-AssociatedOpen in IMG/M
3300015261Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaGHost-AssociatedOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M
3300015265Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaGHost-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0182004_1000933943300014486RootVIEGFEVGEEGASLEFLEISNSATARKVELELWNDAMEKEYPRRSYL*
Ga0182004_1001429173300014486RootMIEGFEVGEEGALLEFLQISNSAAARKVELELWNDAMEKEYPRMNYL*
Ga0182004_1001695523300014486RootMIEGFGVGEERTSSEIWEALKSAAVGEVKLGLWNDVMEKEYPRRNYL*
Ga0182004_1001992033300014486RootVIEGFKVGEEGASLEFLEISNSAAARKVGLELWNDAMEKEYPRRNYL*
Ga0182004_1002004923300014486RootMIEGFEVGEGRVSLGFFELSNRAAARKVELELWNDAMEKEYPRRDYL*
Ga0182004_1002304913300014486RootMIEGFKVGGEKPSLEFLELLKSAAARKVELGLWNDAMEKEYPRRNYL*
Ga0182004_1002412863300014486RootMIEGSEVGEEGALLEFLDISNSAARKVELELWNDTMEKEYPKRKLFIGQNGRG*
Ga0182004_1002466373300014486RootVIEGFGVGGGRASLEFLELSNCAAARKVELELWNDAMEKEYPRRNYL*
Ga0182004_1002568473300014486RootMIEGFGVGEEGTSLEILELSNSAATGEVELELWNDVMGKEYPRRNYL*
Ga0182004_1002578873300014486RootMIEGFGVGGEGTLSKIWETLKSAATGKVKLGLWNDMMEKEYPRRNYL*
Ga0182004_1002673323300014486RootMIEGFEVGEERALLEFLEISNSAARKVELELWNDAMEKEYPRRNYL*
Ga0182004_1002701913300014486RootMIEGFEVDEEEVLLKFLEISNSAAARKVELELWNGAMEKEYPRRDYL*
Ga0182004_1002727613300014486RootMIEDFRVGEERTSLEILESAAARKVKLGLWNDVMEKEYPRRNYL*
Ga0182004_1003087223300014486RootMIEGFGVGEEGVSLEILELSNSAAAGKVELELWNDVMGEEYPRRNYL*
Ga0182004_1003739253300014486RootMIEGFGVGEEGTSSEILETLKSAAAGKVKLGLWNDVMEKEYPRRNYL*
Ga0182004_1003780153300014486RootMIEGFGVGEEGEILELSNSAAARKVKLELWNDVMEKEYLRRNYL*
Ga0182004_1004011443300014486RootMIVGLEVGGEGAWLEFLEISNSAAARKVELELWNDAMEKECPRRNYL*
Ga0182004_1004214613300014486RootMIEGFGVGEEGTSSGISETLNSAAAGKVKLGLWNDVMEKEYPRRNY
Ga0182004_1004334133300014486RootMVEGVEVGEGRASLEFLKLSNCAAARKVELELWNDVMEKEYSRRDYL*
Ga0182004_1004527613300014486RootMIEGFKVGEGRASLEFLKLSNCAAARKVELELWNDAMEKEYPRRDYL*
Ga0182004_1004723233300014486RootVIEGFEVGGGRASLEFLELSNCAAAKKVELELWNDAMEKEYPRRNYL*
Ga0182004_1004733013300014486RootMIGGFEVGEEGALLEFLEISNSTAARKVELELWNDAMEKEYTRRNYL*
Ga0182004_1004752323300014486RootMAILKRMTEGFGVGEEGTSLEILELSNSAAAGKVDLELWNDVMGKEYPRRNYL*
Ga0182004_1004878543300014486RootMIEGFEVGEEGVSLEFLEISKSAAARKVELELWNDAMEKEYPRRNYL*
Ga0182004_1005064713300014486RootMMIEGFEVGEEGALLEFLEISNSAAARKVELELWNDATEKEYPRRDYL*
Ga0182004_1005181323300014486RootVVEGFGVGEGGASLEILELSNSAAAGKVKLKMWNDVMEKEYPRRNYL*
Ga0182004_1005315933300014486RootMIEGFEVGEGRASLEFLELSNCAAARKVELELWNDAIEKEYPRRNYL*
Ga0182004_1005523413300014486RootMIEGFEVGEEGPLLGFLEISNSAAARKVELELWNDAMEKEYPRRNYL*
Ga0182004_1005543113300014486RootMIESFKVGEAGVSLEFLRLSNCAAAREVELELWNDAMEKEYPRRDYL*
Ga0182004_1005720923300014486RootMKRMIEGFRVGGEGASLEISGLSNSVAAGKVELELWNDVMGKDYPRRNYL*
Ga0182004_1005965313300014486RootMIEDFEAGGEKPSLEFLELSNSAAARKVELGLWNDAMEKEYPRRNYL*
Ga0182004_1006018443300014486RootMIEGFGVGEEGTSSEILETLKSAAAGKVMLGLWNDVMEKEYPRRNYL*
Ga0182004_1006040813300014486RootVIEGFDVGEEGASLEFLEISNSAAARKVELELWNDVMEKEYPRRNYL*
Ga0182004_1006066113300014486RootVIEGFGVGEEGASLEILELSNSAAAGKVKLKMWNDVMEEEYPRRNYL*
Ga0182004_1006140113300014486RootMIEGSEVGEEGALLEFLEISNNAARKVELELWNDTMEKEYPRRNYL*
Ga0182004_1006146223300014486RootVIEGFKVGEEGASLEFLEISKSAAARKVELELWNDAMGKEYPRRNYL*
Ga0182004_1006182313300014486RootMIEGFGVGEEGASLEILELLNSAAAGKVELELWNDVMGKEYPRRNYL*
Ga0182004_1006193513300014486RootMIEGFGVGEERTSSEISETLSSAAAGKVKLGLWNDVMEKECPRRNYL*
Ga0182004_1006336413300014486RootMIEGFEVGEEGALLEFLEISNSAAARKVELELRNDAMEKEYPRRNYL*
Ga0182004_1006362913300014486RootMIEGFKVGEEKALLELLEISNSAAARKVELELWNDAMEKECPRRDYL*
Ga0182004_1006547723300014486RootMIEGFEVYEEGALLEFLEISNNAAARKVELELWNDTMEKEYPRRNYL*
Ga0182004_1006654723300014486RootMIEGFRVGEEGTSSETLKSAAAGKVKLGLWNDVMEKEYPRRNYL*
Ga0182004_1006773133300014486RootMIEGFGVGGEEASLEISELSNSATIGKVELELWNDMMGKEYPRTNYL*
Ga0182004_1006785723300014486RootMIEGFEVGEEGALMEFLEISNSAAARIVELELWNDAMEKEYPRRDYL*
Ga0182004_1006974243300014486RootMIEGFEVGEEGALLEFLEISNSAARKVVLELWNDAMEKEYLRRNYL*
Ga0182004_1007097623300014486RootMIEGFGVGEEGTSSGISETLSSAAAGKVKLGFWNDVMEKEYPRRNYL*
Ga0182004_1007163333300014486RootMIEGFGVGEEGTSSEILEFLNSAAAERVELELWNDVMEKEYPRRNYL*
Ga0182004_1007172623300014486RootMIEGFGVGEEGASLEILELSSSTAAEKVELELWNDVMGKEYPRRNYL*
Ga0182004_1007450033300014486RootVVEGFRVGEGGTSLEILELSNSAAAGKVKLELWNDVMEKEYLRRNYL*
Ga0182004_1007493813300014486RootMIEGFEVGEEGALLEFLEISNSAAARKVELELWNDAMEKECPRRNYL*
Ga0182004_1007546213300014486RootMIEGFGVGEEEISSEILELLNSAAAGKMKLELWNDVMEKEYPRRNYL*
Ga0182004_1007566633300014486RootMIKGFGVGEEEISSEILELLNSATARKMKLELWNDVMEKEYPRRNYL*
Ga0182004_1007617413300014486RootVVEGFGVGEGGASLEILELSNSATAGKVKLKLWNDVMEKEYPRRNYL*
Ga0182004_1007720123300014486RootMIEGFGVGEEGTLSEISGTLNSAAAGKVKLGLLNDVMEKEYPRRNYL*
Ga0182004_1007813223300014486RootMAILKRMTEGFGVGEEGTSLEILELSNSAATGKVELELWNDVMRKEYPRRNYL*
Ga0182004_1007889323300014486RootMIEGFEVGEEGALLEFLEISNSAARKVELELWNDAMEKDYPRRNYL*
Ga0182004_1007914833300014486RootVIEGFKVGEEGASLEFLEISNSATARKVELELWNDAMEKEYP*
Ga0182004_1007979213300014486RootMIEGFGVGEEGTSSEILETLKSAAAGKVKLGLWNDVMEEYPRKNYL*
Ga0182004_1007999633300014486RootMIEGSEVGEEGALLEFLEISNSAARKVELELWNDTMEKEYPRRNYL*
Ga0182004_1008053023300014486RootMIEGFGVGEEGASAEILETLSSVAARKVKLGLWNDVMEKEYPRRNYL*
Ga0182004_1008088523300014486RootMIEDFRVGGEGTSSEILEFLNNAAVGKVELELWNDVMEKEYPRRNYL*
Ga0182004_1008186013300014486RootMIEGFEVGEEGALLKFLEISNSAAARKVELELWNDAMEKEYPRRNYL*
Ga0182004_1008205723300014486RootMIKGLGVGEKETSSEILGILNSAAARKVKLGLWNDVMEKEYPRRNYL*
Ga0182004_1008218913300014486RootMIVGLEVGEEGALLEFLEISNSAAVRKVELELWNDAMEECPRRNYL*
Ga0182004_1008331723300014486RootMIEGFGVGEEGASLEILELSNSAAAGKVELELWNDVMGKEYPRRNYL*
Ga0182004_1008366313300014486RootMIEGFEVGEEGTLLEFLEISNNAAAREVELELWNDAMEKEYPRRNYL*
Ga0182004_1008616443300014486RootMKRMIEGFEVGKEGALLEFLEISNSAARKVESELWNDAMEKEYPRRNYL*
Ga0182004_1008682123300014486RootMIKGFGVGEEGTSSEILELLNSAAAGKVKLELWNDVVEKEYPRRNYL*
Ga0182004_1008907533300014486RootMFEGFGVGEEGTSLKILELLDSAAAGRVKLKLWNDVMEKKYPRRNYL*
Ga0182004_1008971413300014486RootMIESFEVGEGRASLEFLELSNSAAARKVELELWNDVMEKEYPRRNYL*
Ga0182004_1008989623300014486RootMIEGFGVGEEGTSSKISGTLNSAAAWKVKLELWNDVMEKEYPRRSYL*
Ga0182004_1009070213300014486RootMIEGFEVGEEGTLLEFLEISNSAAARVVELELWNDAMEKEYPRNNYL*
Ga0182004_1009579323300014486RootLIEGFGVGEEGASLEILELLNSAAAGRVELEPWNDVMGKEYPRRNYL*
Ga0182004_1009585223300014486RootMIEGFGVGEEGASLEILELSNSAAAGKVKLELWNDVMEKEYPRRNYL*
Ga0182004_1009609123300014486RootMIEGFGVGEEGTSSEILETLKSATAGKVKLGLWNDVMEKECPRRNYL*
Ga0182004_1009690513300014486RootMIDGFEVSEEGALLEFLEISNSATARKVELEMWNDAMEKEYLRRNYL*
Ga0182004_1009753433300014486RootMIESFRVGEEGASLEILELSNYAAARKMELERWNDAMEKEYPRRNYL*
Ga0182004_1009784713300014486RootMIEGFGVGEEGTSSEIWETLKSAAARKVKLGLWNDVMEKEYPRRNYL*
Ga0182004_1009834543300014486RootMIKGFRVGEEGTSLEILELLNNAAARKVKLELWNDVMEKEYPRRNYL*
Ga0182004_1010014323300014486RootMFEGFGVGEEGTSSKISELLDSATTGRIKLELWNDVIEKEYPRRNYL*
Ga0182004_1010113823300014486RootMIKGFEVGEAGASLEFLRLSNCAAAREVELELWNDAMEKEYPRRDYL*
Ga0182004_1010172813300014486RootMIEGFGVDEEEISSEILEFLDSAAAGKVKLELWNDVMEKEYPRRNYL*
Ga0182004_1010268413300014486RootMIEGLEVDEKESLLEFLEISNSAARKVELELWNDAMEKEYLRRKYL*
Ga0182004_1010387613300014486RootAKKGMIEGFGDGEEGASLEILELLNNAAARKAELELWDDVIGKEYPRRNYL*
Ga0182004_1010472513300014486RootMKRMIEGFRVGEEGALLEILELSSSAAAEKVELELWNDVMEKEYPRRNYL*
Ga0182004_1010552923300014486RootMIEGFEVRGEGALLEFLEISNNATARKVELELWNDTMEKEYPRRNYL*
Ga0182004_1010567523300014486RootMIEGFGVGEGGTSSEILELLNSAAAGEVKLGLWNDVMKKEYPRRNYL*
Ga0182004_1010596313300014486RootMIEGFKVGEEGTLLDFLEISNSATAREVELELWNDAMEKEYPRRNYL*
Ga0182004_1010689033300014486RootMIEGFGVGEEGTSSEISETLTSAAAGKVKLGLWNDVMEKEYPRRNYL*
Ga0182004_1010746723300014486RootMIEGFRVGEEGTSSEILELLNSAAAWKVELELWNDVMEKEYPRRNYL*
Ga0182004_1010823013300014486RootVVGGFGVGEGGASLEILELSNSAAAGKVKLKMWNDVMEKEYPRRNYL*
Ga0182004_1010999933300014486RootMIEGFEVGEEGALLEFLEISNSAAIRKVELELWNDVMEKEYPRRNYL*
Ga0182004_1011022023300014486RootMMKLTAIFATEEILESFGVGEGGTSLRILELLDSAAAGKVRLELWNDVMEKEYPRRNYS*
Ga0182004_1011148933300014486RootMIEGFGVGEEEISLEILELSNSAAAGKVELEQWNDVMGKEYPRRNYL*
Ga0182004_1011181023300014486RootSEILELLNCAAAGKVKLGVWNDVMEEEYPRRNYL*
Ga0182004_1011252333300014486RootVVESFGVGEGGASLEILELSNSAAAGKVKLELWNDVMEKEYPRRNYL*
Ga0182004_1011358013300014486RootMIEGFGVGEERTSSEISETLSSVAAGKVKLGLWNDVMEKEYPRRNYL*
Ga0182004_1011533013300014486RootLIESFGVGKEGTLSEILEFLKSSAAGTVKLELWNDVMEKEYPRRKYL*
Ga0182004_1011645623300014486RootMIEGFGVGEEGTSSKILEFLNSAAAGKVELELWNNVMEKEYPRRNYL*
Ga0182004_1011658933300014486RootMSEDFGVGEEGASSKILELLDTGKMKLEFWNDVMGKEYPRRNYL*
Ga0182004_1011797613300014486RootVVEGFGVGEGGASLEILELSNSAAAGKVKLELWNDVMEEEYPRRNYL*
Ga0182004_1011803123300014486RootMIEGFGVGEERTSSEISETLNSAAAWKEKLGLWNDLMEKEYPRRNYL*
Ga0182004_1011887433300014486RootMIEGFGVGEERASLEILEPSNSAATGKVELELWNDVMGKEYPRRDYL*
Ga0182004_1011904213300014486RootMIEGFGVGEEGTSSEILELLNSAAARKVELELWNDVMEKEYPRRNYL*
Ga0182004_1012077013300014486RootMVEGFGVGEEGVSLGILELLNSTAAGKVKLELWNDVTKKEYPRRNYL*
Ga0182004_1012169223300014486RootVIEGFKVGEEGTSLEFLEISNSAAARKVELELWNDAMEKEYPRRNYL*
Ga0182004_1012263013300014486RootVLESFEVGVERASSEISELLDGAAAGKVRLELWNDVMGKEYPRREYL*
Ga0182004_1012397613300014486RootMIESFGVGGEGASLEISELSNSAAAGKVELELWNDVMGKEYPRRNYL*
Ga0182004_1012415013300014486RootMKRVVEGFGVGEEGASLKILELSNSAAAGKVKLELWNDEIEKEYPRRNYL*
Ga0182004_1012508723300014486RootMIESFGVGEEGTLSEISETLSSAAAGKVKLWLWNDVMEKEYPRRNYL*
Ga0182004_1012704433300014486RootMVEGFGVGGERASLEILELSNSAATGKVELELWNDAMEKEYPRRNYL*
Ga0182004_1012887523300014486RootVREKYKRWCEGLTSGMMKLTAIFATEEVLESFEVGEEGTSSRVLELLDSAAAGKVKSELWNDVMEKEYPRRNYL*
Ga0182004_1012888413300014486RootMIEGFEVGEGTLLEFLEISNSAAARKVELELWNDAMEKEYPRRNYL*
Ga0182004_1012903223300014486RootMIEGFGVGEEGASLEISELLNSAAAGKVELELWNDVMGKEYPRRNYL*
Ga0182004_1012939213300014486RootMIEGFGVGEEGASLEILELSSSAAAGKVELELWNDVMGKEYPRRNYL*
Ga0182004_1012964723300014486RootVIEGFEVGEEGASLEFLEISNSAAARKVELELWNDAMEKEYPRRNYL*
Ga0182004_1013266823300014486RootMIEGFEVGEERASLEFLELSNGATARKVELELWNDTMEKEYPRRNYL*
Ga0182004_1013378223300014486RootMIEGSGVGEEGTSSEILEALNSTAAGKVKLRLWDDVMEKEYPRRNYL*
Ga0182004_1013407623300014486RootMIEGFRVGEGRTSSEILETLNRAAAWKVKLGLWNEVMEKEYPRRNYL*
Ga0182004_1013534813300014486RootMIEGFGVGEGGASLEILELSNSVAAGKVKLELWNDVMEKEYPRRNYL*
Ga0182004_1013590213300014486RootMMKLTAIFATEETLESFGVGEEGASSEILELLNSAAAGKVRLELWNDVMEEYPRRNYL*
Ga0182004_1013770513300014486RootMFEGFGVGEEGTSSKILELLDSAAAGRIKLELWNDVIEKEYLRRNYL*
Ga0182004_1013772423300014486RootMIEGFGFGEEGTSSEILEFLNSAAAGKVELELWNDAMEKEYPRTNYL*
Ga0182004_1013900323300014486RootMIEGFGVGEEGTSSKISGTLNSAAAWKVKLGLWNDVMEKEYPRRSYL*
Ga0182004_1013989413300014486RootVIEGFEVGKEGTLLDFLEISNSAAAREVELELWNDAMEKEYLRRNYL*
Ga0182004_1013995713300014486RootMKRMIEGFGVGEEGASLEILELSNSAAAEKVKLELWNDVMENEYPRRNYL*
Ga0182004_1014107013300014486RootMIKGFGVGEEGTSSKISGTLNSAAAWKVKLGLWNDVMEKEYPRRSYL*
Ga0182004_1014116813300014486RootMRKKIGGFGVGEEGAWLEILKLSNSAAAGKVKLGLWNDVMEKEYPRRNYL*
Ga0182004_1014184333300014486RootMIEGFEVGEEGALLEFLEISNSAAARKVELELWNDAMEKEYPRRNYL*
Ga0182004_1014205113300014486RootMIEGFRVGEEGASLEILELLDSAAAGKVELELWNDVMGKEYPRRNYL*
Ga0182004_1014213713300014486RootMMKLTAIFATEEVLESFGISEEGISSRILELLDSAATGKVKSELWNDVIEKEYSRRNYL*
Ga0182004_1014227523300014486RootMIEGFEVGEDGALLEFLEISNSTTRKVELELWNDAMEEYPRRNYL*
Ga0182004_1014378723300014486RootMIEGFGVGEEGTSSEILELLDSAAAGKVKLELWNDVMEKEYPRRNYL*
Ga0182004_1014399313300014486RootMIEGFEVGEEGTLLEFLEISNSAAAREVELELWNDAMEKEYPRRNYL*
Ga0182004_1014462613300014486RootMVEGFEVGEGRASLEFLKLSNCAAARRVKLELWNDAMEKEYPRRDYL*
Ga0182004_1014573323300014486RootMIEGFGVGEEGASLEILELLNRAAAGRVELEPWNDVMGKEYSRRNYL*
Ga0182004_1014641813300014486RootMIEGFRVGEEGASLEILDLSNSAAAGKVELELWNDVMGKEYPRRNYL*
Ga0182004_1014963613300014486RootLIESFGVGKEGTSSEILEFLKSAAAGKVKLELWNDVMEKEYPRRNYL*
Ga0182004_1014989413300014486RootMMKLTAIFATEEMLESFGVGEEGASSEILELLNSAAAGKVRLELWNDVMKKEYPRRNYL*
Ga0182004_1014997723300014486RootMIEGFGVGEEGTSSEILEFLNSAAAGKVDLELWNDVMEEYPRRNYL*
Ga0182004_1015056033300014486RootMIEGFEVGEEGALLEFLEISNSVAARKVKLELWNSAMEKEYPRRNYL*
Ga0182004_1015107913300014486RootMIEGFGIGEEGTSSKISGILNSAAAWKVKLGLWNDVMEKEYPRRSYL*
Ga0182004_1015487013300014486RootMIEGFRVGEEGASLEILELSNSAAAGKVELELWNDVMEKEYPRRDYL*
Ga0182004_1015555633300014486RootMIEGFEIGEEGALLEFLEISNSAAARKVELKLWNDAMEKEYPRRNYL*
Ga0182004_1015740023300014486RootREKYKRWCEGLTSGMMKLTAIFATEEILESFGVGEEGTSSKILELLDSAAAGKVKSELWNDVMEKEYPRRNYL*
Ga0182004_1015930823300014486RootMIEGFRVGEEGTSSKISGTLNSAAAWKVKLGLSNDVMEKEYPRRSYF*
Ga0182004_1016014033300014486RootMIEGFEVGGGRASLEFLEISNCAAARKVELELWNDAMEKEYPRRNYL*
Ga0182004_1016135113300014486RootEGTSSEILELLDSAAAGRVKLELWNDVMGKEYPRRNYL*
Ga0182004_1016383313300014486RootMIEGFGVGEEGASLEILEFLNSAAAGRVELEPWNDVMGKEYPRRNYL*
Ga0182004_1016552423300014486RootMIEGFGVGEEGASLEILELLNSATARRVELEPWNDVMGKEYSRRNYL*
Ga0182004_1016575413300014486RootMIEGFEVGEEGALLEFLEISNSAAARKVELELWNDAMEEYPRRNYL
Ga0182004_1016642623300014486RootLEILELSNGAAAGKMELEVWNDVMEKEYPRRNYL*
Ga0182004_1016721613300014486RootMNDEVHGHLVTRRMIEGFRVGEEGTSSKILELLNSAAAGKVELELWNDVMEKEYPRRNYL
Ga0182004_1016854913300014486RootSEDFGVGEEGASSKILELLDSAAAGKMKLELWNDAMEKEYLRRNYL*
Ga0182004_1017035513300014486RootSSEILELLDSAAAGRVKLELWNDVMGKEYPRRNYL*
Ga0182004_1017184123300014486RootMMKLTAIFATEETLESFGVGEEGISSRIFELLDSAAAGKVKSELWNDVMEKEYSRRNYL*
Ga0182004_1017193323300014486RootVIEGFKVGEEGASLEFLEISNSAAARKVELELWNDAMEKEYPRMNYL*
Ga0182004_1017618433300014486RootMIEGFGVGEEGASSEILKLSNSAAAKKVKLELWNDVMEKEYPRRNYL*
Ga0182004_1017790913300014486RootVREKYKRWCEELTSGMMKLTAIFATEGILESFGVGEEGTSSRILELLDSAAAGKVKSELLNDVMEKEYSRRNYL*
Ga0182004_1018110813300014486RootVFEDFEVGEERPSSEFLGLSNCAAARKAKLRLWNDVMEKEYLRRNYL*
Ga0182004_1018203323300014486RootMIEGFGVGEEGTSSEILETLNSAAAGKVKLGLWNDVMEEYPRRNYL*
Ga0182004_1018433623300014486RootMIEGFGVDEEGASLEILELSSSAAAEKVKLELWNDVMEKEYPRRNYL*
Ga0182004_1018760013300014486RootMIEGFRVGEEGASLEILELSNSAAAGKVELELWNDVMGKEYPRRNYL*
Ga0182004_1019131123300014486RootMAIFLARKKVEGFEIGGEKPSLEFLEISNSAAARKVELELWNDAMEKEYPRRNHL*
Ga0182004_1019183323300014486RootMIEGFVVGEEGTSSKILEFLNSAAAGKVELELWNDVMEKEYSRRNYL*
Ga0182004_1019591813300014486RootMIEGFGVGEEGASSKISGTLNSAAAWKVKLGLWNDVMEKEYPRRSYL*
Ga0182004_1019893023300014486RootMIEGFRVGEEGTSSEILELLNSAAAGKVELELWNDVMEKEYPRRNYL*
Ga0182004_1019951923300014486RootMIEGFGVGKEGTSSEILEFLNSAAVGKVELELWDDVMEKEYPRRNYL*
Ga0182004_1019955723300014486RootLRVSGVGEEGASSEILKLLGGAAAGKMKLELWNDVIEKEYPRRNYL*
Ga0182004_1019990613300014486RootMVEGFGVGEGGASLEILELSNSVAAGKVKLELWNDVMEKEYPRRNYL*
Ga0182004_1020123223300014486RootLEILELSNSTAAGKVKLKMWNDVMEKEYPRRNYL*
Ga0182004_1020190313300014486RootMIEGFEVGEEGALLEFLEISNSAARKVELELWNDAMEEYPRRNYL*
Ga0182004_1020194313300014486RootMKREVEGFGVGEGGASLEILELSNSAAARKVKLKMWNDVMEKEYPRRNYL*
Ga0182004_1020323113300014486RootMIEGFGVGEEGTSSEILESAAAGKVKLGLWNDVMEKEYPRRNYL*
Ga0182004_1020339813300014486RootMIEGFGVGEEGASLEILELSNSATAGKVKLELWNDVMEKEYPRRNYL*
Ga0182004_1020848123300014486RootMIEGFGVGEERTSSEISETLNSAAAGKVKLGLWNDVMEKEYPRRNYL*
Ga0182004_1020862813300014486RootVIEGLGVGGEEASLEISEFSNSAAAGKVELELWNDVMGKEYPRRNYL*
Ga0182004_1020889613300014486RootMMNLTAIFATEEMLEDFGVGEGGTTSRILELLDSAAAGKVRLELWNDVMEKEYPRRNYL*
Ga0182004_1021359313300014486RootMIEGFGVGEEGTSSEILEFLNSAAAGKVELELWNDMMEKEYPRRNYL*
Ga0182004_1021642313300014486RootMIEGFEVGEEVALLFLEISNSAAARKVELELWNDAMEKEYPRRNYL*
Ga0182004_1022021323300014486RootMIEGFGVGEEGASVEILELSNSATAGKVELELWNDVMEKQYPRRNYL*
Ga0182004_1022611913300014486RootMMKLTAIFATEEILESFGVGEEGISSRILELLDSTAAGKVKSELWNDVMEKEYSRRNYL*
Ga0182004_1022671213300014486RootMIEGFGVGDEGDSSEILEFSNSAAAGKVKLELWNDVMEKEYPRRNYL*
Ga0182004_1022821323300014486RootVIEGFRGCEEGTSSEILELLNSAAAGKVELELWNDVMEKEYPKRNYL*
Ga0182004_1023685813300014486RootMIEGFGVVEEGASLEILELSNSAAAGKVELELWNDVMGKEHPRRNYL*
Ga0182004_1024345313300014486RootMIEGFEVGEEGALLEFLEISISAAARKVELELWNDAMEKEYPRRNYL*
Ga0182004_1024440523300014486RootSSKILELLDSAAAGKVKLELWNDVMEKEYPRRNYL*
Ga0182004_1024842313300014486RootMIEGFGVGEEGTSSEILELSNSAAAGKVELELWNDVMGKEYPRRNYL*
Ga0182004_1024921513300014486RootMFEGFGVGEEGTSSKILELLDSAAAGRIKLELWNDMIEKEYPRRNYL*
Ga0182004_1025189023300014486RootMIEGFRVREEGTSLEILELLNSAAAGKVELELWNDVMEKEYPRRNYL*
Ga0182004_1025688913300014486RootMIEGFEVGEEGTLLDFLEISNSATVREVELELWNDAMEKEYPRRNYL*
Ga0182004_1026870513300014486RootMMKLTAIFATEEMLEDFGVDEGGTTSRILELLDSAAAGKVRLELWNDVMEKEYPRRNYL*
Ga0182004_1027735623300014486RootMMKLTAIFATEEILESFGVGEEGTSSKILELLDSAAAGKVKSELWNDVMEKEYSRRNYL*
Ga0182004_1027854413300014486RootMIEGFEVGEEGVLLEFLEISNSAAARKVELELWNDVMKEYPRRNYL*
Ga0182004_1028073613300014486RootMIEGFGVGEEGTSLEILELLNSAAAGRVELEPWNDVMGKEYPRRNYL*
Ga0182004_1028137313300014486RootEEGALLEFLEISNSAAARKVKLELWNDAMEKEYPRRNYL*
Ga0182004_1028290223300014486RootMSEDFGVGEEGASSKILELLDSAAAGKMRLGFWNDVMGKEYPRRNYL*
Ga0182004_1028495723300014486RootMSEDVGVGEEGASPEILELLDDAAAEGVKLELWNDVMGKEYPRRNYL*
Ga0182004_1028923813300014486RootMSEDFGVGEEGASSEILELLDNTAAEGVKLELWNDVMGKEYPRRNYL*
Ga0182004_1029205613300014486RootMMKLTAIFESFGVGEEGASSEILELLDSAAAGKVKLELWDDVMGKEYPRRNYL*
Ga0182004_1029455213300014486RootEEGASSKILELLDSAAAGKMKLELWNDAMEKEYPRRNYL*
Ga0182004_1029622623300014486RootVGEEGASSKILELLDSAAAGKMRLGFWNDVMGKEYPRRNYL*
Ga0182004_1029743823300014486RootMIEGFEVGEEGALLEFLEISNSAAARKVELELWNDEMEKEYPRRNYL*
Ga0182004_1029963013300014486RootMIEGFEVGEEGALLEFMEISNSAAARKVELELWNDAMEKEYPRRNCL*
Ga0182006_122893913300015261RhizosphereVGEEGASLEILELSNSAAAGKVKLKMWNDVMEEKYPRRNYL*
Ga0182007_1010117913300015262RhizosphereVVEGFGVGEGGASLEILELSNSATAGKVKLKLWNDVMGKEYPRRNYL*
Ga0182007_1030833323300015262RhizosphereGRMIEGFGVGEEGASSKISGTLNSAAAWKVKLGLWNDVMEKEYPRRSYL*
Ga0182005_110968323300015265RhizosphereMIEGFEVGEEGALLEFLEISNSVAARKVELELWNDAMEKEYPRRNYL*
Ga0182005_129743313300015265RhizosphereMSEDFGVGEEGASSEILELLDNAAAEGVKLELWNDVIGKEYPRRNYL*

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.