Metagenome / Metatranscriptome Family F019372

Basic Information
Family ID	F019372
Family Type	Metagenome / Metatranscriptome
Number of Sequences	230
Average Sequence Length	43 residues
Representative Sequence	MPLFWLFAEAAVNPKYIAEYVFPGVITGYFTHLEYVKLAP
Number of Associated Samples	154
Number of Associated Scaffolds	230

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.22 %
% of genes near scaffold ends (potentially truncated)	93.91 %
% of genes from short scaffolds (< 2000 bps)	94.35 %
Associated GOLD sequencing projects	144
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.18

Most Common Taxonomy
Group	Bacteria (92.609 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (18.261 % of family members)
Environment Ontology (ENVO)	Unclassified (23.043 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (37.826 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.71% β-sheet: 0.00% Coil/Unstructured: 85.29%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 230 Family Scaffolds
PF00496	SBP_bac_5	44.78
PF00528	BPD_transp_1	9.57
PF02585	PIG-L	2.61
PF13586	DDE_Tnp_1_2	1.30
PF00005	ABC_tran	1.30
PF04909	Amidohydro_2	1.30
PF13565	HTH_32	0.87
PF13280	WYL	0.87
PF00355	Rieske	0.87
PF13546	DDE_5	0.87
PF13408	Zn_ribbon_recom	0.43
PF13191	AAA_16	0.43
PF05532	CsbD	0.43
PF06441	EHN	0.43
PF13610	DDE_Tnp_IS240	0.43
PF13302	Acetyltransf_3	0.43
PF01609	DDE_Tnp_1	0.43
PF00890	FAD_binding_2	0.43
PF00589	Phage_integrase	0.43
PF07929	PRiA4_ORF3	0.43
PF02796	HTH_7	0.43
PF01632	Ribosomal_L35p	0.43
PF13358	DDE_3	0.43
PF12762	DDE_Tnp_IS1595	0.43
PF11848	DUF3368	0.43
PF03717	PBP_dimer	0.43
PF00487	FA_desaturase	0.43
PF12759	HTH_Tnp_IS1	0.43
PF02515	CoA_transf_3	0.43

COG ID	Name	Functional Category	% Frequency in 230 Family Scaffolds
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	2.61
COG0291	Ribosomal protein L35	Translation, ribosomal structure and biogenesis [J]	0.43
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.43
COG0768	Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2)	Cell cycle control, cell division, chromosome partitioning [D]	0.43
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.43
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.43
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.43
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.43
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.43
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.43
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.43
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.43
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.43
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.43

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.61 %
Unclassified	root	N/A	7.39 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.61 %
Unclassified	root	N/A	7.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.61 %
Unclassified	root	N/A	7.39 %

Name	Rank	Taxonomy	Distribution
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	62.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	10.43 %
Unclassified	root	N/A	7.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.30 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.43 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	0.43 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.87 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	62.17 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	7.39 %
Unclassified	root	N/A	7.39 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.04 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	2.61 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.43 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.43 %
Nitrospinae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae	0.43 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.43 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.87 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.87 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	62.17 %
Unclassified	root	N/A	7.39 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	6.52 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.61 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.30 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.43 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.43 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.43 %
Nitrospinia	class	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia	0.43 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.43 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.43 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.87 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	62.17 %
Unclassified	root	N/A	7.39 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	6.52 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.30 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.43 %
unclassified Chloroflexia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia	0.43 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.43 %
Nitrospinales	order	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales	0.43 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.43 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.43 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.43 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.43 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.43 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.87 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	62.17 %
Unclassified	root	N/A	7.39 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	6.52 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.30 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.43 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.43 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.43 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.43 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.43 %
Nostocaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae	0.43 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.43 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.43 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.43 %
Nitrospinaceae	family	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae	0.43 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	0.43 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	62.17 %
Unclassified	root	N/A	7.39 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	6.52 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.30 %
Nitrospina	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	0.43 %
Nostoc	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc	0.43 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	0.43 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.43 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.43 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.43 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.43 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.43 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.43 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.43 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.43 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	62.17 %
Unclassified	root	N/A	7.39 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	6.52 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.30 %
unclassified Nostoc	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc	0.43 %
unclassified Nitrospina	no rank	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina → unclassified Nitrospina	0.43 %
unclassified Ktedonobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter	0.43 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.43 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.43 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.43 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.43 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.43 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.43 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.43 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.43 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	62.17 %
Unclassified	root	N/A	7.39 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	6.52 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.30 %
Nostoc sp. CHAB 5836	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc → Nostoc sp. CHAB 5836	0.43 %
Ktedonobacter sp. 13_1_40CM_4_52_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_1_40CM_4_52_4	0.43 %
Nitrospina sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina → unclassified Nitrospina → Nitrospina sp.	0.43 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.43 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.43 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.43 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.43 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.43 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.43 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.43 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.43 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.87 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_11625529	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	608	Open in IMG/M
3300000955\|JGI1027J12803_108531671	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	665	Open in IMG/M
3300004463\|Ga0063356_104039684	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	631	Open in IMG/M
3300004643\|Ga0062591_102681950	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	526	Open in IMG/M
3300005186\|Ga0066676_10093942	All Organisms → cellular organisms → Bacteria	1806	Open in IMG/M
3300005332\|Ga0066388_103860382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	765	Open in IMG/M
3300005332\|Ga0066388_106988373	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	568	Open in IMG/M
3300005441\|Ga0070700_100563232	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	887	Open in IMG/M
3300005445\|Ga0070708_100443453	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1224	Open in IMG/M
3300005471\|Ga0070698_101626127	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	598	Open in IMG/M
3300005540\|Ga0066697_10679380	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	565	Open in IMG/M
3300005552\|Ga0066701_10756307	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	581	Open in IMG/M
3300005553\|Ga0066695_10324134	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	969	Open in IMG/M
3300005554\|Ga0066661_10224913	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1163	Open in IMG/M
3300005561\|Ga0066699_11228465	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	514	Open in IMG/M
3300005713\|Ga0066905_100187329	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1533	Open in IMG/M
3300005713\|Ga0066905_101654764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	587	Open in IMG/M
3300005718\|Ga0068866_11240956	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	539	Open in IMG/M
3300005764\|Ga0066903_104110259	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300005764\|Ga0066903_105519131	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	667	Open in IMG/M
3300005764\|Ga0066903_107161415	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300005764\|Ga0066903_107533853	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	561	Open in IMG/M
3300005764\|Ga0066903_107825073	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	549	Open in IMG/M
3300005764\|Ga0066903_108547852	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	522	Open in IMG/M
3300005937\|Ga0081455_10019356	All Organisms → cellular organisms → Bacteria	6442	Open in IMG/M
3300005937\|Ga0081455_10097253	All Organisms → cellular organisms → Bacteria	2373	Open in IMG/M
3300005937\|Ga0081455_10690446	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	652	Open in IMG/M
3300006049\|Ga0075417_10260128	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	834	Open in IMG/M
3300006173\|Ga0070716_101017475	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	656	Open in IMG/M
3300006194\|Ga0075427_10068007	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	632	Open in IMG/M
3300006797\|Ga0066659_11709911	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	531	Open in IMG/M
3300006844\|Ga0075428_100209031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	2109	Open in IMG/M
3300006846\|Ga0075430_100391099	All Organisms → cellular organisms → Bacteria	1147	Open in IMG/M
3300006852\|Ga0075433_11743226	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	536	Open in IMG/M
3300006880\|Ga0075429_100144054	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2085	Open in IMG/M
3300006880\|Ga0075429_100946184	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	753	Open in IMG/M
3300006880\|Ga0075429_101543472	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	577	Open in IMG/M
3300006904\|Ga0075424_102225760	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	577	Open in IMG/M
3300006969\|Ga0075419_10284920	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1111	Open in IMG/M
3300007076\|Ga0075435_101203933	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	663	Open in IMG/M
3300007265\|Ga0099794_10482742	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	651	Open in IMG/M
3300009012\|Ga0066710_102774659	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	694	Open in IMG/M
3300009012\|Ga0066710_103072566	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300009012\|Ga0066710_103558694	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	588	Open in IMG/M
3300009038\|Ga0099829_10425258	Not Available	1099	Open in IMG/M
3300009038\|Ga0099829_11269001	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	609	Open in IMG/M
3300009089\|Ga0099828_10570352	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300009090\|Ga0099827_10357349	Not Available	1243	Open in IMG/M
3300009090\|Ga0099827_11197923	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	660	Open in IMG/M
3300009090\|Ga0099827_11597479	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	568	Open in IMG/M
3300009094\|Ga0111539_11272564	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	854	Open in IMG/M
3300009094\|Ga0111539_13115207	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	535	Open in IMG/M
3300009100\|Ga0075418_11009714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	900	Open in IMG/M
3300009100\|Ga0075418_12240335	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	596	Open in IMG/M
3300009100\|Ga0075418_12554487	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	557	Open in IMG/M
3300009137\|Ga0066709_100310655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2146	Open in IMG/M
3300009137\|Ga0066709_102358508	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	726	Open in IMG/M
3300009147\|Ga0114129_10291985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2175	Open in IMG/M
3300009147\|Ga0114129_10963585	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1077	Open in IMG/M
3300009147\|Ga0114129_12486983	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	619	Open in IMG/M
3300009156\|Ga0111538_10119708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3344	Open in IMG/M
3300009156\|Ga0111538_10551416	All Organisms → cellular organisms → Bacteria → Proteobacteria	1461	Open in IMG/M
3300009156\|Ga0111538_11100912	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1004	Open in IMG/M
3300009156\|Ga0111538_11646999	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300009156\|Ga0111538_12747525	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	617	Open in IMG/M
3300009162\|Ga0075423_12477720	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	566	Open in IMG/M
3300009444\|Ga0114945_10168247	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1262	Open in IMG/M
3300009444\|Ga0114945_10339318	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	890	Open in IMG/M
3300009691\|Ga0114944_1193962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	810	Open in IMG/M
3300009691\|Ga0114944_1214216	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	773	Open in IMG/M
3300009691\|Ga0114944_1285082	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	676	Open in IMG/M
3300009792\|Ga0126374_10897551	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	686	Open in IMG/M
3300009792\|Ga0126374_10985208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	660	Open in IMG/M
3300009792\|Ga0126374_11176320	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	613	Open in IMG/M
3300009792\|Ga0126374_11811438	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	511	Open in IMG/M
3300009814\|Ga0105082_1032512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	835	Open in IMG/M
3300009816\|Ga0105076_1031305	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	939	Open in IMG/M
3300009816\|Ga0105076_1088033	Not Available	592	Open in IMG/M
3300009820\|Ga0105085_1019299	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1179	Open in IMG/M
3300009820\|Ga0105085_1127208	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	515	Open in IMG/M
3300009822\|Ga0105066_1171746	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	504	Open in IMG/M
3300010038\|Ga0126315_10291912	Not Available	1004	Open in IMG/M
3300010038\|Ga0126315_10494898	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	779	Open in IMG/M
3300010042\|Ga0126314_10611645	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	795	Open in IMG/M
3300010043\|Ga0126380_11357199	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300010046\|Ga0126384_10370110	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1201	Open in IMG/M
3300010046\|Ga0126384_10780982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	853	Open in IMG/M
3300010046\|Ga0126384_12438717	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	507	Open in IMG/M
3300010047\|Ga0126382_11829448	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	572	Open in IMG/M
3300010047\|Ga0126382_11902729	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	563	Open in IMG/M
3300010047\|Ga0126382_12491486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	504	Open in IMG/M
3300010145\|Ga0126321_1319906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	500	Open in IMG/M
3300010326\|Ga0134065_10363285	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	572	Open in IMG/M
3300010333\|Ga0134080_10123541	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1081	Open in IMG/M
3300010359\|Ga0126376_10804777	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	918	Open in IMG/M
3300010359\|Ga0126376_11253339	All Organisms → cellular organisms → Bacteria → Acidobacteria	759	Open in IMG/M
3300010359\|Ga0126376_12665364	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	549	Open in IMG/M
3300010359\|Ga0126376_12954097	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	525	Open in IMG/M
3300010360\|Ga0126372_11227503	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	775	Open in IMG/M
3300010360\|Ga0126372_12384036	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	579	Open in IMG/M
3300010361\|Ga0126378_11642882	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300010361\|Ga0126378_12937920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	544	Open in IMG/M
3300010362\|Ga0126377_10866947	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300010362\|Ga0126377_11472475	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	754	Open in IMG/M
3300010362\|Ga0126377_12972909	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	547	Open in IMG/M
3300010362\|Ga0126377_13073672	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	539	Open in IMG/M
3300010366\|Ga0126379_11156786	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	880	Open in IMG/M
3300010366\|Ga0126379_11511056	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	777	Open in IMG/M
3300010391\|Ga0136847_10052481	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2121	Open in IMG/M
3300010391\|Ga0136847_12534785	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	540	Open in IMG/M
3300010398\|Ga0126383_12191815	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	639	Open in IMG/M
3300010398\|Ga0126383_13451198	Not Available	516	Open in IMG/M
3300011429\|Ga0137455_1259487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	512	Open in IMG/M
3300012202\|Ga0137363_10866404	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	767	Open in IMG/M
3300012204\|Ga0137374_10810137	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	694	Open in IMG/M
3300012204\|Ga0137374_10947410	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300012206\|Ga0137380_10171419	All Organisms → cellular organisms → Bacteria	1976	Open in IMG/M
3300012209\|Ga0137379_10579246	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1029	Open in IMG/M
3300012210\|Ga0137378_10406723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1262	Open in IMG/M
3300012210\|Ga0137378_10689537	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	932	Open in IMG/M
3300012212\|Ga0150985_104800480	Not Available	715	Open in IMG/M
3300012351\|Ga0137386_10098641	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2064	Open in IMG/M
3300012354\|Ga0137366_10349447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae → Nostoc → unclassified Nostoc → Nostoc sp. CHAB 5836	1082	Open in IMG/M
3300012354\|Ga0137366_10432976	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	955	Open in IMG/M
3300012355\|Ga0137369_10479137	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	883	Open in IMG/M
3300012355\|Ga0137369_10925742	Not Available	584	Open in IMG/M
3300012357\|Ga0137384_10281547	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1384	Open in IMG/M
3300012357\|Ga0137384_11014310	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300012359\|Ga0137385_10491344	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1039	Open in IMG/M
3300012359\|Ga0137385_10557839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	966	Open in IMG/M
3300012359\|Ga0137385_11244282	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	606	Open in IMG/M
3300012359\|Ga0137385_11646413	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	506	Open in IMG/M
3300012361\|Ga0137360_10901909	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	762	Open in IMG/M
3300012361\|Ga0137360_11244315	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	644	Open in IMG/M
3300012410\|Ga0134060_1103183	Not Available	502	Open in IMG/M
3300012922\|Ga0137394_10878129	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	749	Open in IMG/M
3300012930\|Ga0137407_10379985	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1305	Open in IMG/M
3300012930\|Ga0137407_11558283	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	629	Open in IMG/M
3300012944\|Ga0137410_10031275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	3719	Open in IMG/M
3300012944\|Ga0137410_10182168	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1617	Open in IMG/M
3300012944\|Ga0137410_11603874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	570	Open in IMG/M
3300012948\|Ga0126375_10069284	Not Available	1970	Open in IMG/M
3300012948\|Ga0126375_10385102	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300012948\|Ga0126375_11724508	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	544	Open in IMG/M
3300012971\|Ga0126369_10731462	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1068	Open in IMG/M
3300012971\|Ga0126369_11849825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	692	Open in IMG/M
3300012972\|Ga0134077_10583343	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	504	Open in IMG/M
3300015245\|Ga0137409_10685339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	858	Open in IMG/M
3300015371\|Ga0132258_12428084	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300015372\|Ga0132256_101172427	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	882	Open in IMG/M
3300016387\|Ga0182040_11936124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	506	Open in IMG/M
3300016404\|Ga0182037_10875953	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300017656\|Ga0134112_10517386	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	507	Open in IMG/M
3300017965\|Ga0190266_10296933	All Organisms → cellular organisms → Bacteria → Acidobacteria	840	Open in IMG/M
3300017997\|Ga0184610_1096669	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	932	Open in IMG/M
3300018056\|Ga0184623_10099568	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina → unclassified Nitrospina → Nitrospina sp.	1342	Open in IMG/M
3300018056\|Ga0184623_10379708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_1_40CM_4_52_4	627	Open in IMG/M
3300018063\|Ga0184637_10300294	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	973	Open in IMG/M
3300018076\|Ga0184609_10498910	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	555	Open in IMG/M
3300018078\|Ga0184612_10265944	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	884	Open in IMG/M
3300018079\|Ga0184627_10432539	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	684	Open in IMG/M
3300018084\|Ga0184629_10598093	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	563	Open in IMG/M
3300018466\|Ga0190268_11822097	Not Available	550	Open in IMG/M
3300019208\|Ga0180110_1222142	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	532	Open in IMG/M
3300019212\|Ga0180106_1261948	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300019228\|Ga0180119_1194675	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	854	Open in IMG/M
3300019228\|Ga0180119_1374454	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300019229\|Ga0180116_1058825	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	659	Open in IMG/M
3300019232\|Ga0180114_1235375	Not Available	830	Open in IMG/M
3300019233\|Ga0184645_1007586	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300019238\|Ga0180112_1361508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1957	Open in IMG/M
3300019249\|Ga0184648_1149986	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1213	Open in IMG/M
3300019249\|Ga0184648_1272709	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	626	Open in IMG/M
3300019249\|Ga0184648_1317719	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1663	Open in IMG/M
3300019254\|Ga0184641_1008745	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	508	Open in IMG/M
3300019254\|Ga0184641_1109136	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	515	Open in IMG/M
3300019255\|Ga0184643_1176455	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	545	Open in IMG/M
3300019259\|Ga0184646_1389740	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	739	Open in IMG/M
3300019279\|Ga0184642_1649557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	665	Open in IMG/M
3300019458\|Ga0187892_10227795	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300020065\|Ga0180113_1104046	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	815	Open in IMG/M
3300020067\|Ga0180109_1049807	Not Available	579	Open in IMG/M
3300020193\|Ga0194131_10191450	Not Available	971	Open in IMG/M
3300022563\|Ga0212128_10094210	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1934	Open in IMG/M
3300025149\|Ga0209827_11001597	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	885	Open in IMG/M
3300025157\|Ga0209399_10147911	Not Available	946	Open in IMG/M
3300025936\|Ga0207670_10422213	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300025961\|Ga0207712_10048813	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2946	Open in IMG/M
3300026075\|Ga0207708_10650069	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	897	Open in IMG/M
3300026313\|Ga0209761_1186778	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	932	Open in IMG/M
3300027056\|Ga0209879_1067268	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300027655\|Ga0209388_1011255	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2413	Open in IMG/M
3300027655\|Ga0209388_1176485	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	598	Open in IMG/M
3300027655\|Ga0209388_1191806	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	568	Open in IMG/M
3300027750\|Ga0209461_10042707	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300027875\|Ga0209283_10389250	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	910	Open in IMG/M
3300027880\|Ga0209481_10379364	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	723	Open in IMG/M
3300027882\|Ga0209590_10420858	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	863	Open in IMG/M
3300027903\|Ga0209488_10791523	Not Available	673	Open in IMG/M
3300027903\|Ga0209488_11114248	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	538	Open in IMG/M
3300027907\|Ga0207428_11279980	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	508	Open in IMG/M
3300027909\|Ga0209382_10608288	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1189	Open in IMG/M
3300027961\|Ga0209853_1003136	All Organisms → cellular organisms → Bacteria	5049	Open in IMG/M
3300028536\|Ga0137415_11354068	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	532	Open in IMG/M
3300030570\|Ga0247647_1042066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	925	Open in IMG/M
3300030570\|Ga0247647_1185663	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300030576\|Ga0247644_1103894	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	637	Open in IMG/M
3300030634\|Ga0247636_10143998	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	711	Open in IMG/M
3300030902\|Ga0308202_1049508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	767	Open in IMG/M
3300030903\|Ga0308206_1132923	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	585	Open in IMG/M
3300031092\|Ga0308204_10311731	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	530	Open in IMG/M
3300031093\|Ga0308197_10404688	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	535	Open in IMG/M
3300031094\|Ga0308199_1031906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	952	Open in IMG/M
3300031094\|Ga0308199_1086085	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	672	Open in IMG/M
3300031228\|Ga0299914_11255647	Not Available	590	Open in IMG/M
3300031573\|Ga0310915_10524000	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	842	Open in IMG/M
3300031740\|Ga0307468_102286000	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	525	Open in IMG/M
3300031744\|Ga0306918_10672018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	811	Open in IMG/M
3300031744\|Ga0306918_10774177	All Organisms → cellular organisms → Bacteria → Proteobacteria	750	Open in IMG/M
3300031820\|Ga0307473_10927518	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	631	Open in IMG/M
3300031897\|Ga0318520_10195033	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1192	Open in IMG/M
3300031910\|Ga0306923_11012318	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300032002\|Ga0307416_103211188	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	547	Open in IMG/M
3300032075\|Ga0310890_11595643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	539	Open in IMG/M
3300032163\|Ga0315281_12028637	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	549	Open in IMG/M
3300032180\|Ga0307471_103710419	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	540	Open in IMG/M
3300032261\|Ga0306920_104286573	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	513	Open in IMG/M
3300033811\|Ga0364924_152793	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	545	Open in IMG/M
3300034662\|Ga0314783_018298	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1108	Open in IMG/M
3300034674\|Ga0314799_030627	Not Available	605	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.04%
Host-Associated	Host-Associated	16.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.65%
Aquatic	Environmental → Aquatic	17.39%
Plants	Host-Associated → Plants	16.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.48%
Freshwater	Environmental → Aquatic → Freshwater	10.00%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.48%
Sediment	Environmental → Aquatic → Sediment	3.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.04%
Cave	Environmental → Terrestrial → Cave	0.43%
Floodplain	Environmental → Terrestrial → Floodplain	0.43%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.43%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.04%
Sediment	Environmental → Aquatic → Freshwater → Sediment	7.83%
Loam	Environmental → Terrestrial → Soil → Loam	7.39%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.48%
Sand	Environmental → Terrestrial → Soil → Sand	3.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.17%
Lake	Environmental → Aquatic → Freshwater → Lake	1.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.87%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.43%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.43%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.43%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.43%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.43%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.04%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	7.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.35%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	3.48%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.17%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.30%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.87%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.43%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.43%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.43%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.43%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.43%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.43%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.43%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.43%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.17%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	7.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.35%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	3.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.48%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.17%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.30%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.30%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.30%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.87%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.43%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.43%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.43%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.43%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.43%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.43%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.43%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.43%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.43%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.43%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.43%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.43%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.43%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009691	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019208	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT231_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019212	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT25_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019228	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT790_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019229	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019232	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT530_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019238	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT466_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300020065	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020067	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020193	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015053 Kigoma Offshore 120m	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025149	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2 (SPAdes)	Environmental	Open in IMG/M
3300025157	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030570	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb12 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030576	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb9 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030634	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033811	Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034674	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.18
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.18
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F019372

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign